BLASTX nr result

ID: Ziziphus21_contig00006357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00006357
         (364 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KRH46371.1| hypothetical protein GLYMA_08G3294001, partial [G...    57   4e-06
gb|KHN31664.1| hypothetical protein glysoja_022529 [Glycine soja]      57   4e-06
ref|XP_006586581.1| PREDICTED: cleavage and polyadenylation spec...    57   4e-06
ref|XP_003551440.1| PREDICTED: cleavage and polyadenylation spec...    57   4e-06
ref|XP_003551437.1| PREDICTED: cleavage and polyadenylation spec...    57   4e-06

>gb|KRH46371.1| hypothetical protein GLYMA_08G3294001, partial [Glycine max]
          Length = 153

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 32/54 (59%), Positives = 32/54 (59%)
 Frame = -3

Query: 284 MDQFHRNEAISAVAXXXXXXXXXXXXXXXXXXXXXVGEGFLQSLRKNDDLGFRN 123
           MDQFHRNEAISAVA                     VGEGFLQSLRKNDD GFRN
Sbjct: 15  MDQFHRNEAISAVADDGFLGEEEDDDYEDLYNDVNVGEGFLQSLRKNDDSGFRN 68


>gb|KHN31664.1| hypothetical protein glysoja_022529 [Glycine soja]
          Length = 535

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 32/54 (59%), Positives = 32/54 (59%)
 Frame = -3

Query: 284 MDQFHRNEAISAVAXXXXXXXXXXXXXXXXXXXXXVGEGFLQSLRKNDDLGFRN 123
           MDQFHRNEAISAVA                     VGEGFLQSLRKNDD GFRN
Sbjct: 15  MDQFHRNEAISAVADEGFLGEEEDDDYEDLYNDVNVGEGFLQSLRKNDDSGFRN 68


>ref|XP_006586581.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185-like [Glycine max]
          Length = 659

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 32/54 (59%), Positives = 32/54 (59%)
 Frame = -3

Query: 284 MDQFHRNEAISAVAXXXXXXXXXXXXXXXXXXXXXVGEGFLQSLRKNDDLGFRN 123
           MDQFHRNEAISAVA                     VGEGFLQSLRKNDD GFRN
Sbjct: 15  MDQFHRNEAISAVADDGFLGEEEDDDYEDLYNDVNVGEGFLQSLRKNDDSGFRN 68


>ref|XP_003551440.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185-like [Glycine max] gi|947048965|gb|KRG98493.1|
           hypothetical protein GLYMA_18G077400 [Glycine max]
          Length = 696

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 32/54 (59%), Positives = 32/54 (59%)
 Frame = -3

Query: 284 MDQFHRNEAISAVAXXXXXXXXXXXXXXXXXXXXXVGEGFLQSLRKNDDLGFRN 123
           MDQFHRNEAISAVA                     VGEGFLQSLRKNDD GFRN
Sbjct: 15  MDQFHRNEAISAVADEGFLGEEEDDDYEDLYNDVNVGEGFLQSLRKNDDSGFRN 68


>ref|XP_003551437.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185-like isoform X1 [Glycine max]
           gi|571543924|ref|XP_006602132.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit CG7185-like
           isoform X2 [Glycine max]
           gi|571543928|ref|XP_006602133.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit CG7185-like
           isoform X3 [Glycine max] gi|947048961|gb|KRG98489.1|
           hypothetical protein GLYMA_18G077300 [Glycine max]
           gi|947048962|gb|KRG98490.1| hypothetical protein
           GLYMA_18G077300 [Glycine max]
           gi|947048963|gb|KRG98491.1| hypothetical protein
           GLYMA_18G077300 [Glycine max]
           gi|947048964|gb|KRG98492.1| hypothetical protein
           GLYMA_18G077300 [Glycine max]
          Length = 698

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 32/54 (59%), Positives = 32/54 (59%)
 Frame = -3

Query: 284 MDQFHRNEAISAVAXXXXXXXXXXXXXXXXXXXXXVGEGFLQSLRKNDDLGFRN 123
           MDQFHRNEAISAVA                     VGEGFLQSLRKNDD GFRN
Sbjct: 15  MDQFHRNEAISAVADEGFLGEEEDDDYEDLYNDVNVGEGFLQSLRKNDDSGFRN 68


Top