BLASTX nr result
ID: Ziziphus21_contig00006252
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00006252
(1547 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010087702.1| DNA-directed RNA polymerase I subunit rpa49 ... 487 e-134
ref|XP_004141689.1| PREDICTED: DNA-directed RNA polymerase I sub... 460 e-126
ref|XP_008462335.1| PREDICTED: uncharacterized protein LOC103500... 458 e-126
ref|XP_008228244.1| PREDICTED: DNA-directed RNA polymerase I sub... 446 e-122
ref|XP_007215426.1| hypothetical protein PRUPE_ppa006096mg [Prun... 444 e-121
ref|XP_010273794.1| PREDICTED: DNA-directed RNA polymerase I sub... 437 e-119
ref|XP_004305732.2| PREDICTED: DNA-directed RNA polymerase I sub... 433 e-118
ref|XP_010062676.1| PREDICTED: DNA-directed RNA polymerase I sub... 432 e-118
ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub... 431 e-118
emb|CBI35920.3| unnamed protein product [Vitis vinifera] 430 e-117
ref|XP_008391357.1| PREDICTED: uncharacterized protein LOC103453... 416 e-113
ref|XP_009372386.1| PREDICTED: DNA-directed RNA polymerase I sub... 414 e-112
ref|XP_007039490.1| DNA-directed RNA polymerase I subunit rpa49,... 414 e-112
ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I sub... 414 e-112
gb|KRH12305.1| hypothetical protein GLYMA_15G165300 [Glycine max] 412 e-112
ref|XP_009355506.1| PREDICTED: DNA-directed RNA polymerase I sub... 411 e-112
ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypep... 408 e-111
ref|XP_012472150.1| PREDICTED: DNA-directed RNA polymerase I sub... 390 e-105
ref|XP_011014273.1| PREDICTED: DNA-directed RNA polymerase I sub... 389 e-105
ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616... 389 e-105
>ref|XP_010087702.1| DNA-directed RNA polymerase I subunit rpa49 [Morus notabilis]
gi|587839011|gb|EXB29690.1| DNA-directed RNA polymerase I
subunit rpa49 [Morus notabilis]
Length = 438
Score = 487 bits (1253), Expect = e-134
Identities = 258/442 (58%), Positives = 320/442 (72%), Gaps = 3/442 (0%)
Frame = -3
Query: 1455 MDSDEEDTKSQMMLDHXXXXXXXXXXXXXXXXXXXXXXXXXXEVQATIQVLQDHSDRAPP 1276
MDSD ED++S+ L+ +V+ATIQV+Q+ +RAPP
Sbjct: 1 MDSDAEDSRSRQNLE-TETPRKRSEPSSTSIAEKKSKKKRKNKVEATIQVVQNQPERAPP 59
Query: 1275 LVGYFPSGFDPEESARTGESSSTRV-RVLRNMEKPKRLQVVVTPPGSKVDFVGTNYSGEA 1099
LVGYFPSGFDP++ ESS+T + RV RN KPKRLQ+VV+P G+ VDFVGTNYSGEA
Sbjct: 60 LVGYFPSGFDPKDG--DDESSATAMARVFRNRNKPKRLQLVVSPNGANVDFVGTNYSGEA 117
Query: 1098 EAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGGLDFSNKEPENSAVEELSAQQ 919
EAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKV GL NK+ + A E SA
Sbjct: 118 EAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVRGLRLPNKDSGSLAEGERSALS 177
Query: 918 KTEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDLDKQIKKVVVNKDALESTDAH 739
K+EK++ LT+ YGT KS +E K ++L Q DDP++ D+D++IK++V+ KDALEST H
Sbjct: 178 KSEKIKG-LTDRYGTNKSIREAKKRDALYQNDDPETQKDMDEKIKQIVIKKDALESTQVH 236
Query: 738 TARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFLQGGREVSSNTYPTFISNRIY 559
T RNIPP+N +ATS +EAYP++KIILKGEW FLEDIY+ LQ E+ S+ YP+FISNRI
Sbjct: 237 TDRNIPPYNAAATSSQEAYPIEKIILKGEWDFLEDIYRLLQEEAELKSDDYPSFISNRIQ 296
Query: 558 KLRDIQDEVETKKLSCIFSYITHLIKFKDLHNMDNRKSAKRHNFPSILHQKFSTLF--GE 385
LR+ +DE E K+ +CIFSYITHLIKFKDLH+MD SAKRH FPSIL QKFS +F E
Sbjct: 297 NLRETEDEEEKKRRACIFSYITHLIKFKDLHSMDGVSSAKRHKFPSILRQKFSAMFLSSE 356
Query: 384 EKIMSPEKHDXXXXXXXXXXXYADEFRTDFSDIAKDLRMNTIQLRTHYEHLGCKISRQNN 205
K ++ +++D YAD F+T+ +DIAKDLRM ++ LR HYE LGCK+ RQNN
Sbjct: 357 VKKLASKENDLLISYVLVLTLYADRFQTNLTDIAKDLRMTSVTLRVHYEQLGCKLVRQNN 416
Query: 204 ISFAILPVPLQFPQTRPKRRRR 139
+ FA LPVPLQFP R +RR+R
Sbjct: 417 LWFATLPVPLQFPDLRQRRRKR 438
>ref|XP_004141689.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Cucumis
sativus] gi|700190278|gb|KGN45511.1| hypothetical protein
Csa_7G450680 [Cucumis sativus]
Length = 435
Score = 460 bits (1184), Expect = e-126
Identities = 235/397 (59%), Positives = 295/397 (74%), Gaps = 2/397 (0%)
Frame = -3
Query: 1326 VQATIQVLQDHSDRAPPLVGYFPSGFDPEESARTGESSSTRVRVLRNMEKPKRLQVVVTP 1147
+ A IQVL + + PP+VGYFPSGFDP + A +S S R RV ++ +P R+Q+VV+P
Sbjct: 41 MDAKIQVLSNQPQKTPPVVGYFPSGFDPHKDADKEQSRSVRARVYKHKNRPNRMQLVVSP 100
Query: 1146 PGSKVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGGLDFS 967
GS VDFVGTNY GEA AG+QHC YALGVLDK TQ+LKIVPIASN IFRL+PKV G D +
Sbjct: 101 TGSNVDFVGTNYLGEATAGKQHCTYALGVLDKATQSLKIVPIASNMIFRLDPKVRGSDVT 160
Query: 966 NKEPENSAVEELSAQQKTEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDLDKQI 787
E + A EELS Q K +MR+ LT LYGTKKS+K+ K+++LKQ DDP++ +DLD ++
Sbjct: 161 ENESPSVANEELSGQDKANRMRE-LTALYGTKKSKKQAQKLHALKQEDDPETKSDLDGRM 219
Query: 786 KKVVVNKDALESTDAHTARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFLQGGR 607
K VVVNK+ALE T A ARNIP +N SAT+P+EAYPLDKIILKGEWSFLED+Y LQ
Sbjct: 220 KNVVVNKEALEGTQAEVARNIPAYNASATTPQEAYPLDKIILKGEWSFLEDLYFRLQETA 279
Query: 606 EVSSNTYPTFISNRIYKLRDIQDEVETKKLSCIFSYITHLIKFKDLHNMDNRKSAKRHNF 427
E+S+ TYP+F+ NRIYKL+DIQDE E KKL CIFSYITHLIK+KD H+M + SAK H
Sbjct: 280 EISA-TYPSFVRNRIYKLQDIQDEEEKKKLCCIFSYITHLIKYKDQHSMGDVSSAKGHKI 338
Query: 426 PSILHQKFSTLF--GEEKIMSPEKHDXXXXXXXXXXXYADEFRTDFSDIAKDLRMNTIQL 253
PS+L QKFS++F E + +S +K + +ADEF +D +DIAKDLR + L
Sbjct: 339 PSMLRQKFSSMFPTAESRRLSADKINLLISHVLVLSLFADEFSSDPADIAKDLRTSPYDL 398
Query: 252 RTHYEHLGCKISRQNNISFAILPVPLQFPQTRPKRRR 142
R H+++LGCK R+NN+S A LP+PLQFP+ R KRRR
Sbjct: 399 RLHFDNLGCKFIRKNNLSLATLPIPLQFPELRQKRRR 435
>ref|XP_008462335.1| PREDICTED: uncharacterized protein LOC103500711 [Cucumis melo]
Length = 436
Score = 458 bits (1178), Expect = e-126
Identities = 235/397 (59%), Positives = 294/397 (74%), Gaps = 2/397 (0%)
Frame = -3
Query: 1326 VQATIQVLQDHSDRAPPLVGYFPSGFDPEESARTGESSSTRVRVLRNMEKPKRLQVVVTP 1147
+ A IQVL + + PP+VGYFPSGFDP + A +S S R RV ++ KP R+Q+VV+P
Sbjct: 42 MNAKIQVLSNQPQKIPPVVGYFPSGFDPHKDADKEQSHSVRARVYKHRNKPNRMQLVVSP 101
Query: 1146 PGSKVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGGLDFS 967
GS VDFVGTNY GEA AG+QHC YALGVLDK TQ+LKIVPIASN I RL+PKV G D S
Sbjct: 102 TGSNVDFVGTNYLGEATAGKQHCTYALGVLDKATQSLKIVPIASNMILRLDPKVRGSDVS 161
Query: 966 NKEPENSAVEELSAQQKTEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDLDKQI 787
E + A EELS Q+K +MR+ LT LYGTKKS+K+ K+++LKQ DDP++ NDLD ++
Sbjct: 162 ENESPSVANEELSLQEKANRMRE-LTALYGTKKSKKQAQKLHALKQEDDPETKNDLDGRM 220
Query: 786 KKVVVNKDALESTDAHTARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFLQGGR 607
K VVVNK+ALE T A ARNIP +N SAT+P+E YPLDKIILKGEWSFLED+Y L+
Sbjct: 221 KNVVVNKEALEGTQAEIARNIPAYNASATTPQEVYPLDKIILKGEWSFLEDLYFRLRETA 280
Query: 606 EVSSNTYPTFISNRIYKLRDIQDEVETKKLSCIFSYITHLIKFKDLHNMDNRKSAKRHNF 427
E+++ TYP+F+ NRIYKL+DIQDE E KKL CIFSYITHLIK+KD H+M + SAK H
Sbjct: 281 EINA-TYPSFVRNRIYKLQDIQDEEEKKKLCCIFSYITHLIKYKDQHSMGDVSSAKGHKI 339
Query: 426 PSILHQKFSTLF--GEEKIMSPEKHDXXXXXXXXXXXYADEFRTDFSDIAKDLRMNTIQL 253
PS+L QKFS++F E + +S +K + +ADEF +D +DIAKDLR + L
Sbjct: 340 PSMLRQKFSSMFPTAESRRLSADKINLLISHVLVLTLFADEFSSDPADIAKDLRTSPYDL 399
Query: 252 RTHYEHLGCKISRQNNISFAILPVPLQFPQTRPKRRR 142
R H+++LGCK R+NN+S A LPVPLQFP+ R KRRR
Sbjct: 400 RLHFDNLGCKFIRKNNLSLATLPVPLQFPELRQKRRR 436
>ref|XP_008228244.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA49 [Prunus mume]
Length = 427
Score = 446 bits (1147), Expect = e-122
Identities = 237/440 (53%), Positives = 305/440 (69%), Gaps = 1/440 (0%)
Frame = -3
Query: 1455 MDSDEEDTKSQMMLDHXXXXXXXXXXXXXXXXXXXXXXXXXXEVQATIQVLQDHSDRAPP 1276
M+SD EDTKSQM + VQATIQV+ D ++ PP
Sbjct: 1 MESDAEDTKSQMTQN----------PSTPQTHKHKKKKKKIPTVQATIQVVPDIPEKTPP 50
Query: 1275 LVGYFPSGFDPEESARTGESSSTRVRVLRNMEKPKRLQVVVTPPGSKVDFVGTNYSGEAE 1096
LVGYFP FDP +S S+ST V + R+ +KP+RLQ+VVTP G+ VDFVGTNY+GEA
Sbjct: 51 LVGYFPCSFDPTKSPY---SNSTDVGLFRDSKKPRRLQIVVTPNGTNVDFVGTNYTGEAT 107
Query: 1095 AGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGGLDFSNKEPENSAVEELSAQQK 916
GQ CN+ALGVLDK TQTLKI+P+ASNKIFRL+P V G ++S KEPE+S E+L+ ++K
Sbjct: 108 TGQS-CNFALGVLDKATQTLKILPVASNKIFRLQPMVRGYNYSAKEPESSVKEQLTGEEK 166
Query: 915 TEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDLDKQIKKVVVNKDALESTDAHT 736
EK + L + YGTKK+ +E K+ SLKQ D P+S DLD +IK +V NK+ALEST++
Sbjct: 167 AEKQME-LQSRYGTKKAIRESKKLRSLKQEDGPESQKDLDAKIKLIVPNKEALESTESQI 225
Query: 735 ARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFLQGGREVSSNTYPTFISNRIYK 556
+R+IPP N SAT+P+EA+PLDKIIL GEW L DIY+ QGG EVS + +P F+ +RI+K
Sbjct: 226 SRHIPPFNESATTPQEAFPLDKIILTGEWDLLGDIYEHFQGGAEVSWDAFPRFVCHRIHK 285
Query: 555 LRDIQDEVETKKLSCIFSYITHLIKFKDLHNMDNRKSAKRHNFPSILHQKFSTLFG-EEK 379
L+DI+ + E KLSCIFSYITHLIKFKD H+MD S++ H P++L KFST+F E K
Sbjct: 286 LQDIEVDEEKFKLSCIFSYITHLIKFKDQHSMDGISSSRTHRIPNLLFHKFSTMFPMESK 345
Query: 378 IMSPEKHDXXXXXXXXXXXYADEFRTDFSDIAKDLRMNTIQLRTHYEHLGCKISRQNNIS 199
+S EK + + DEF TD +DIAKDLRM+ I LR HYE+LGCK+ R+ N+
Sbjct: 346 SLSNEKTNLLISYVLVLTLFVDEFETDLTDIAKDLRMSAIALRKHYENLGCKLVRKRNVM 405
Query: 198 FAILPVPLQFPQTRPKRRRR 139
FA LPVPLQFPQ R +R++R
Sbjct: 406 FATLPVPLQFPQLRQRRQKR 425
>ref|XP_007215426.1| hypothetical protein PRUPE_ppa006096mg [Prunus persica]
gi|462411576|gb|EMJ16625.1| hypothetical protein
PRUPE_ppa006096mg [Prunus persica]
Length = 427
Score = 444 bits (1141), Expect = e-121
Identities = 237/440 (53%), Positives = 304/440 (69%), Gaps = 1/440 (0%)
Frame = -3
Query: 1455 MDSDEEDTKSQMMLDHXXXXXXXXXXXXXXXXXXXXXXXXXXEVQATIQVLQDHSDRAPP 1276
M+SD EDTKSQM + VQATIQV+ D ++ PP
Sbjct: 1 MESDAEDTKSQMTQN----------PSTPQTHRHKKKKKKIPTVQATIQVVPDIPEKTPP 50
Query: 1275 LVGYFPSGFDPEESARTGESSSTRVRVLRNMEKPKRLQVVVTPPGSKVDFVGTNYSGEAE 1096
LVGYFP FDP +S S+ST V + R+ +KP+RLQ+VVTP G+ VDFVGTNY+GEA
Sbjct: 51 LVGYFPCSFDPTKSPY---SNSTDVGLFRDSKKPRRLQIVVTPNGTNVDFVGTNYTGEAT 107
Query: 1095 AGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGGLDFSNKEPENSAVEELSAQQK 916
GQ CN+ALGVLDK TQTLKI+P+ASNKIFRL+P V G ++S KEPE+S E+L+ ++K
Sbjct: 108 TGQS-CNFALGVLDKATQTLKILPVASNKIFRLQPMVRGYNYSAKEPESSVKEQLTGEEK 166
Query: 915 TEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDLDKQIKKVVVNKDALESTDAHT 736
EK + L + YGTKK+ +E K+ SLKQ D P+S DLD +IK +V NK+ALEST++
Sbjct: 167 AEKQME-LQSRYGTKKAIRESKKLRSLKQEDGPESQKDLDAKIKLIVPNKEALESTESQI 225
Query: 735 ARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFLQGGREVSSNTYPTFISNRIYK 556
+R+IPP N SAT+P+EAY LDKIIL GEW L DIY+ QGG EVS + +P F+ +RI+K
Sbjct: 226 SRHIPPFNESATTPQEAYSLDKIILTGEWDLLGDIYEHFQGGAEVSWDAFPRFVCHRIHK 285
Query: 555 LRDIQDEVETKKLSCIFSYITHLIKFKDLHNMDNRKSAKRHNFPSILHQKFSTLF-GEEK 379
L+DI+ + E KLSCIFSYITHLIKFKD H+MD S++ H P++L KFST+F E K
Sbjct: 286 LQDIEVDEEKFKLSCIFSYITHLIKFKDQHSMDGISSSRTHRIPNLLFHKFSTMFPTESK 345
Query: 378 IMSPEKHDXXXXXXXXXXXYADEFRTDFSDIAKDLRMNTIQLRTHYEHLGCKISRQNNIS 199
+S EK + + DEF TD +DIAKDLRM+ I LR HYE+LGCK+ R+ N+
Sbjct: 346 GLSNEKTNLLISYVLVLTLFVDEFETDLTDIAKDLRMSAIALRKHYENLGCKLVRKRNVM 405
Query: 198 FAILPVPLQFPQTRPKRRRR 139
FA LPVPLQFPQ R +R++R
Sbjct: 406 FATLPVPLQFPQLRQRRQKR 425
>ref|XP_010273794.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Nelumbo
nucifera]
Length = 406
Score = 437 bits (1123), Expect = e-119
Identities = 223/395 (56%), Positives = 287/395 (72%), Gaps = 3/395 (0%)
Frame = -3
Query: 1314 IQVLQDHSDRAPPLVGYFPSGFDPEESARTGESSSTRVRVLRNMEKPKRLQVVVTPPGSK 1135
+++ H D+ PPLVGYFPSGF+P+ R+ E ST+VRV N +P RLQ+VV+P SK
Sbjct: 17 MEIFHQHPDKIPPLVGYFPSGFNPK---RSEEEDSTKVRVYSNKNRPNRLQLVVSPNSSK 73
Query: 1134 VDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGGLDFSNKEP 955
V+FVGT+YS EA A Q C YALGVLDKETQTLKIVPIASNKIFRLEP+V G + S+KEP
Sbjct: 74 VEFVGTSYSSEAAAAQV-CTYALGVLDKETQTLKIVPIASNKIFRLEPRVRGSEVSDKEP 132
Query: 954 ENSAVEE-LSAQQKTEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDLDKQIKKV 778
EE L+A+QK +K+RD LTNLYGTKKS K+ SLKQ +DP S + +DK+I+
Sbjct: 133 RGELQEEDLTAEQKADKIRD-LTNLYGTKKSISRAKKMESLKQKEDPISQDAVDKKIEGF 191
Query: 777 VVNKDALESTDAHTARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFLQGGREVS 598
V+NKDALE+ +TARN+PPH+ +AT+P++AYPL+KII KGEW +L D+ + LQ G +S
Sbjct: 192 VINKDALETAAVYTARNVPPHDPTATTPDKAYPLNKIIFKGEWDYLLDVLELLQSGATIS 251
Query: 597 SNTYPTFISNRIYKLRDIQDEVETKKLSCIFSYITHLIKFKDLHNMDNRKSAKRHNFPSI 418
S+ YP+F+ NRIYKL +IQDE+E K+L+CI SYITHLIKFKD ++D SAK H FP I
Sbjct: 252 SDAYPSFVCNRIYKLEEIQDEMEKKRLACILSYITHLIKFKDQRSVDGASSAKYHKFPPI 311
Query: 417 LHQKFSTLFGEEKI--MSPEKHDXXXXXXXXXXXYADEFRTDFSDIAKDLRMNTIQLRTH 244
+ QKF TLF + ++ +K D + D+F TD SDIAKDLRM + LR H
Sbjct: 312 ILQKFLTLFANSETYRLADDKQDLLISYVLVLTLFIDKFSTDMSDIAKDLRMTPVSLRLH 371
Query: 243 YEHLGCKISRQNNISFAILPVPLQFPQTRPKRRRR 139
Y++LGCK+SR + + LPVPLQFP+ R +RRRR
Sbjct: 372 YQNLGCKLSRVDKLLMVTLPVPLQFPKPRTQRRRR 406
>ref|XP_004305732.2| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Fragaria
vesca subsp. vesca]
Length = 436
Score = 433 bits (1113), Expect = e-118
Identities = 235/442 (53%), Positives = 301/442 (68%), Gaps = 3/442 (0%)
Frame = -3
Query: 1455 MDSDEEDTKSQMMLDHXXXXXXXXXXXXXXXXXXXXXXXXXXEVQATIQVLQDHSDRAPP 1276
MDSD E T+SQM +VQATI+V+ + +R PP
Sbjct: 1 MDSDTEKTRSQMTATKSEPSTPSKKHKKRKRVAAEADPEKPQQVQATIRVIPGNPERIPP 60
Query: 1275 LVGYFPSGFDPEESARTGESSSTRVRVLRNMEKP-KRLQVVVTPPGS-KVDFVGTNYSGE 1102
LVGYFPSGFDP ++ + ST+V V R+ E+ RLQVVVTP KVDFVGT+Y+GE
Sbjct: 61 LVGYFPSGFDPTQNP---DPDSTKVGVFRHKERGGTRLQVVVTPNKEPKVDFVGTSYAGE 117
Query: 1101 AEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGGLDFSNKEPENSAVEELSAQ 922
A+AG+ C+Y LG+LDK TQTLKIVPIASNKIFRLE K+ GLD + KEP S + ELS
Sbjct: 118 AQAGEL-CSYGLGILDKATQTLKIVPIASNKIFRLEAKIQGLDSAGKEPAGSGIGELSTL 176
Query: 921 QKTEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDLDKQIKKVVVNKDALESTDA 742
+K K R++L NLYGTKKS ++ K+ +LKQ DDPDS NDLD IK+ +++++ E+++
Sbjct: 177 EKA-KRRNELHNLYGTKKSIRQNKKMQTLKQEDDPDSQNDLDA-IKQGMIDREDTEASEG 234
Query: 741 HTARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFLQGGREVSSNTYPTFISNRI 562
H RN PP N SAT+P EAYPLDKII EW FL+DIYK +GG E+S ++P F+ NR+
Sbjct: 235 HKDRNTPPFNASATTPHEAYPLDKIITTEEWKFLQDIYKLSEGGAEISQVSFPAFVCNRV 294
Query: 561 YKLRDIQDEVETKKLSCIFSYITHLIKFKDLHNMDNRKSAKRHNFPSILHQKFSTLF-GE 385
+KL+ I+DE + KLSCIFSYITHL+KFKDLH+MD SAK H FPS++ KFST+F
Sbjct: 295 HKLQLIEDEDKRNKLSCIFSYITHLVKFKDLHSMDGFSSAKGHRFPSMIKDKFSTMFDAV 354
Query: 384 EKIMSPEKHDXXXXXXXXXXXYADEFRTDFSDIAKDLRMNTIQLRTHYEHLGCKISRQNN 205
K +S EK++ +ADEF+T +DIAKDLRM+ LRTHYE LGCK+S++N+
Sbjct: 355 SKRLSTEKNNLLISYVLVLTLFADEFQTSMTDIAKDLRMSNATLRTHYETLGCKVSKKND 414
Query: 204 ISFAILPVPLQFPQTRPKRRRR 139
+S LPVPLQFP R KRR R
Sbjct: 415 VSTVTLPVPLQFPTVRRKRRNR 436
>ref|XP_010062676.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Eucalyptus
grandis] gi|629104338|gb|KCW69807.1| hypothetical protein
EUGRSUZ_F03167 [Eucalyptus grandis]
Length = 415
Score = 432 bits (1110), Expect = e-118
Identities = 222/400 (55%), Positives = 288/400 (72%), Gaps = 5/400 (1%)
Frame = -3
Query: 1326 VQATIQVLQDHSDRAPPLVGYFPSGFDPEESARTGESSSTR---VRVLRNMEKPKRLQVV 1156
+ ATI L D +D+ PPLVGYFPSGFDP G VRV RN + P RLQ+V
Sbjct: 19 LSATIHALPDSADKIPPLVGYFPSGFDPSSGGGGGGGDPPEEPGVRVYRNGKWPNRLQLV 78
Query: 1155 VTPPGSKVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGGL 976
V PP S V FVG++ SGE G Q C YALGVLDKE+QTLK+VPIA NKIFRLEP+V
Sbjct: 79 VRPPESNVTFVGSSSSGEY-TGVQSCTYALGVLDKESQTLKVVPIACNKIFRLEPRVAS- 136
Query: 975 DFSNKEPENSAVEELSAQQKTEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDLD 796
D +EP E+SA++K +K+R+ L L+GTK+S + K+ SL+Q DDP+S DLD
Sbjct: 137 DLPEEEPPELGRGEISAKEKADKVRE-LNLLFGTKRSVTQDKKMQSLRQEDDPNSQKDLD 195
Query: 795 KQIKKVVVNKDALESTDAHTARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFLQ 616
++IK+V +NK+ALESTDAH ARNIPP+N+SAT P++AYPL+KIILKGEW +++DI++FL+
Sbjct: 196 RKIKEVAINKEALESTDAHIARNIPPYNSSATVPKDAYPLEKIILKGEWDYIKDIFQFLE 255
Query: 615 GGREVSSNTYPTFISNRIYKLRDIQDEVETKKLSCIFSYITHLIKFKDLHNMDNRKSAKR 436
G++VS + YPTF+ NRI+KL ++QDE+E + L CI SYI HLIKFKD H+ D S+K
Sbjct: 256 EGQKVSPDAYPTFVCNRIHKLGEMQDEMEKETLGCILSYINHLIKFKDQHSADGASSSKN 315
Query: 435 HNFPSILHQKFSTLF--GEEKIMSPEKHDXXXXXXXXXXXYADEFRTDFSDIAKDLRMNT 262
H PSIL QKFST+F E K + EK D +AD+FRTD +DIAKDLRM++
Sbjct: 316 HKIPSILRQKFSTMFSNAESKWLPSEKIDLLISYVLVLTLFADDFRTDPTDIAKDLRMSS 375
Query: 261 IQLRTHYEHLGCKISRQNNISFAILPVPLQFPQTRPKRRR 142
+ +R H+EHLGCK SR+ N+ +A LPVPL+FP+ R +RRR
Sbjct: 376 VTIRQHFEHLGCKFSREKNVLYAKLPVPLKFPELRRRRRR 415
>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Vitis
vinifera]
Length = 421
Score = 431 bits (1108), Expect = e-118
Identities = 223/398 (56%), Positives = 286/398 (71%), Gaps = 3/398 (0%)
Frame = -3
Query: 1326 VQATIQVLQDHSDRAPPLVGYFPSGFDPEESARTGESSSTRVRVLRNMEKPKRLQVVVTP 1147
V ++V+ +H ++ PPLVGYFPSGFDP + V+V RN + RLQ+VV+P
Sbjct: 27 VNVKMEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKARANRLQLVVSP 86
Query: 1146 PGSKVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGGLDFS 967
SKV+FVGT+YSGEA A Q C YALGVLDKETQTLKIVPIASNKIFRLEP+VGG D S
Sbjct: 87 NDSKVNFVGTSYSGEA-ASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDAS 145
Query: 966 NKEPENSAVEELSAQQKTEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDLDKQI 787
EP + E +A++K +MRD LTNLYGTKKS + K+ +L Q DDP S DLD+++
Sbjct: 146 VDEPSSLLKGEQTAEEKAGRMRD-LTNLYGTKKSITQAKKLQALNQKDDPRSQKDLDRKL 204
Query: 786 KKVVVNKDALESTDAHTARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFLQGGR 607
K+VV+NK+ALEST AH+ARNIPP++ +AT+P+EAY LDKII KGEW +L DI LQ G
Sbjct: 205 KEVVINKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGV 264
Query: 606 EVSSNTYPTFISNRIYKLRDIQDEVETKKLSCIFSYITHLIKFKDLHNMDNRKSAKRHNF 427
EV S+ Y +F+ NRI KL++++DE E L+CIFSYI HL+K+KD ++MD SAK H
Sbjct: 265 EVESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMD-ASSAKHHKI 323
Query: 426 PSILHQKFSTLF---GEEKIMSPEKHDXXXXXXXXXXXYADEFRTDFSDIAKDLRMNTIQ 256
P IL+QKFS++F + + ++ EK D YADEFRTD SDIA+DLRM+ ++
Sbjct: 324 PGILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVK 383
Query: 255 LRTHYEHLGCKISRQNNISFAILPVPLQFPQTRPKRRR 142
LR H+EHLGCK+ QN ++ A LPVPL FP+ R KRRR
Sbjct: 384 LRAHFEHLGCKLVSQNKVTMATLPVPLTFPRLRQKRRR 421
>emb|CBI35920.3| unnamed protein product [Vitis vinifera]
Length = 391
Score = 430 bits (1105), Expect = e-117
Identities = 222/394 (56%), Positives = 285/394 (72%), Gaps = 3/394 (0%)
Frame = -3
Query: 1314 IQVLQDHSDRAPPLVGYFPSGFDPEESARTGESSSTRVRVLRNMEKPKRLQVVVTPPGSK 1135
++V+ +H ++ PPLVGYFPSGFDP + V+V RN + RLQ+VV+P SK
Sbjct: 1 MEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKARANRLQLVVSPNDSK 60
Query: 1134 VDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGGLDFSNKEP 955
V+FVGT+YSGEA A Q C YALGVLDKETQTLKIVPIASNKIFRLEP+VGG D S EP
Sbjct: 61 VNFVGTSYSGEA-ASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDASVDEP 119
Query: 954 ENSAVEELSAQQKTEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDLDKQIKKVV 775
+ E +A++K +MRD LTNLYGTKKS + K+ +L Q DDP S DLD+++K+VV
Sbjct: 120 SSLLKGEQTAEEKAGRMRD-LTNLYGTKKSITQAKKLQALNQKDDPRSQKDLDRKLKEVV 178
Query: 774 VNKDALESTDAHTARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFLQGGREVSS 595
+NK+ALEST AH+ARNIPP++ +AT+P+EAY LDKII KGEW +L DI LQ G EV S
Sbjct: 179 INKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVEVES 238
Query: 594 NTYPTFISNRIYKLRDIQDEVETKKLSCIFSYITHLIKFKDLHNMDNRKSAKRHNFPSIL 415
+ Y +F+ NRI KL++++DE E L+CIFSYI HL+K+KD ++MD SAK H P IL
Sbjct: 239 SAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMD-ASSAKHHKIPGIL 297
Query: 414 HQKFSTLF---GEEKIMSPEKHDXXXXXXXXXXXYADEFRTDFSDIAKDLRMNTIQLRTH 244
+QKFS++F + + ++ EK D YADEFRTD SDIA+DLRM+ ++LR H
Sbjct: 298 NQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVKLRAH 357
Query: 243 YEHLGCKISRQNNISFAILPVPLQFPQTRPKRRR 142
+EHLGCK+ QN ++ A LPVPL FP+ R KRRR
Sbjct: 358 FEHLGCKLVSQNKVTMATLPVPLTFPRLRQKRRR 391
>ref|XP_008391357.1| PREDICTED: uncharacterized protein LOC103453588 [Malus domestica]
Length = 438
Score = 416 bits (1068), Expect = e-113
Identities = 220/443 (49%), Positives = 296/443 (66%), Gaps = 5/443 (1%)
Frame = -3
Query: 1455 MDSDEEDTKSQMMLDHXXXXXXXXXXXXXXXXXXXXXXXXXXEVQATIQVLQDHSDRAPP 1276
M+SD EDTKSQ+ + QA +QV +H ++ PP
Sbjct: 1 MESDAEDTKSQLTQNQDPSTPKHKHKKRKTKKTAVPTIPTF---QAAVQVFPEHPEKTPP 57
Query: 1275 LVGYFPSGFDPEESARTGESSSTRVRVLRNMEKPKRLQVVVTPPGSKVDFVGTNYSGEAE 1096
+V +F SGFDP ++ + +ST++ + RN + KR+++VV P G+ VDFVGT+Y+G A
Sbjct: 58 IVAHFSSGFDPTKNP---DPNSTKIGLFRNANRAKRVELVVHPDGTSVDFVGTSYTGAAT 114
Query: 1095 AGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGGLDFSNKEPENSAVEELSAQQK 916
+ Q+CNYALGVLDK TQTLKI PI SNKIFRLEPKV G ++S+KEP +SA+ EL+AQ+K
Sbjct: 115 S-DQYCNYALGVLDKATQTLKITPIVSNKIFRLEPKVRGYNYSDKEPASSAMGELTAQEK 173
Query: 915 TEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDLDKQIKKVVVNKDALESTDAHT 736
EK +L NLYGTKKS +E K+ SLKQAD PDSL DLD ++K++VVNK+ALES +A +
Sbjct: 174 AEKQM-QLHNLYGTKKSIRESKKMQSLKQADGPDSLKDLDAKMKQIVVNKEALESAEAQS 232
Query: 735 ARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFLQGGREVSSNTYPTFISNRIYK 556
+R+IPP N SAT+P+EAYPLDKII+ GEW ++DIY LQGG +V + YP F+ NRI K
Sbjct: 233 SRHIPPFNESATTPQEAYPLDKIIITGEWDDVQDIYNKLQGGNDVKWDAYPNFVLNRIQK 292
Query: 555 LRDIQDEVETKKLSCIFSYITHLIKFKDLHNMDNRKSAKRHNFPSILHQKFSTLF----- 391
L+DI+ E E KL+CI +YITHLIKFKD + MD SAK H PS L KF +F
Sbjct: 293 LKDIRVEEEKFKLACICTYITHLIKFKDQYTMDGVSSAKGHRIPSNLRNKFLNMFDPAAG 352
Query: 390 GEEKIMSPEKHDXXXXXXXXXXXYADEFRTDFSDIAKDLRMNTIQLRTHYEHLGCKISRQ 211
+ +S EK + + DEF+T+ +DIAKDLRM ++ HYE+LGCK+++Q
Sbjct: 353 SRRQTLSREKTNLLISYVLVLTLHVDEFQTELTDIAKDLRMGEANVKDHYENLGCKLTKQ 412
Query: 210 NNISFAILPVPLQFPQTRPKRRR 142
A LPVPL+FPQ + +R++
Sbjct: 413 RGKPVATLPVPLKFPQEQRRRKK 435
>ref|XP_009372386.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Pyrus x
bretschneideri] gi|694425989|ref|XP_009340693.1|
PREDICTED: DNA-directed RNA polymerase I subunit
rpa49-like [Pyrus x bretschneideri]
Length = 438
Score = 414 bits (1064), Expect = e-112
Identities = 218/443 (49%), Positives = 296/443 (66%), Gaps = 5/443 (1%)
Frame = -3
Query: 1455 MDSDEEDTKSQMMLDHXXXXXXXXXXXXXXXXXXXXXXXXXXEVQATIQVLQDHSDRAPP 1276
M+SD EDTKSQ+ + QA +QV +H ++ PP
Sbjct: 1 MESDAEDTKSQLTQNQDPSTPKHKHKKRKTKKTAVPTIPTF---QAAVQVFPEHPEKTPP 57
Query: 1275 LVGYFPSGFDPEESARTGESSSTRVRVLRNMEKPKRLQVVVTPPGSKVDFVGTNYSGEAE 1096
+V +F SGFDP ++ + +ST++ + RN + KR+++VV P G+ VDFVGT+Y+G A
Sbjct: 58 IVAHFSSGFDPTKNP---DPNSTKIGLFRNANRTKRVELVVHPDGTNVDFVGTSYTGAAT 114
Query: 1095 AGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGGLDFSNKEPENSAVEELSAQQK 916
+ Q+CNYALGVLDK TQTLKI P+ SNKIFRLEPKV G ++S+KEP +SA+ EL+AQ+K
Sbjct: 115 S-DQYCNYALGVLDKATQTLKITPLVSNKIFRLEPKVRGYNYSDKEPASSAMGELTAQEK 173
Query: 915 TEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDLDKQIKKVVVNKDALESTDAHT 736
EK +L NLYGTKKS +E K+ SLKQAD PDSLNDLD ++K++VVNK+ALES + +
Sbjct: 174 AEKQM-QLHNLYGTKKSIRESKKMQSLKQADGPDSLNDLDAKMKQIVVNKEALESAETQS 232
Query: 735 ARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFLQGGREVSSNTYPTFISNRIYK 556
+R+IPP N SAT+P+EAYPLDKII+ GEW ++DIY LQGG +V + YP F+ NRI K
Sbjct: 233 SRHIPPFNESATTPQEAYPLDKIIITGEWDDVQDIYNKLQGGNDVKWDAYPNFVLNRIQK 292
Query: 555 LRDIQDEVETKKLSCIFSYITHLIKFKDLHNMDNRKSAKRHNFPSILHQKFSTLF----- 391
L+DI+ E E KL+CI +YITHLIKFKD + MD SAK H PS L KF +F
Sbjct: 293 LKDIRVEEEKFKLACICTYITHLIKFKDQYTMDGVSSAKGHRIPSNLRNKFLNMFDPAAG 352
Query: 390 GEEKIMSPEKHDXXXXXXXXXXXYADEFRTDFSDIAKDLRMNTIQLRTHYEHLGCKISRQ 211
+ +S EK + + DEF+T+ +DIAKDLRM ++ HYE+LGCK++++
Sbjct: 353 SRRQTLSREKTNLLISYVLVLTLHVDEFQTELTDIAKDLRMGEANVKDHYENLGCKLTKK 412
Query: 210 NNISFAILPVPLQFPQTRPKRRR 142
A LPVPL+FPQ + +R++
Sbjct: 413 KGKPVATLPVPLKFPQEQRRRKK 435
>ref|XP_007039490.1| DNA-directed RNA polymerase I subunit rpa49, putative [Theobroma
cacao] gi|508776735|gb|EOY23991.1| DNA-directed RNA
polymerase I subunit rpa49, putative [Theobroma cacao]
Length = 457
Score = 414 bits (1064), Expect = e-112
Identities = 221/415 (53%), Positives = 284/415 (68%), Gaps = 20/415 (4%)
Frame = -3
Query: 1323 QATIQVLQDHSDRAPPLVGYFPSGFDP----------------EESARTGESSSTRVRVL 1192
Q IQ+ QD ++ PPLV YFPSG++P EE +S+ RV+V
Sbjct: 44 QVKIQLFQDQPNKIPPLVAYFPSGYNPCKTDPQTRQGEEEEEEEEEGPDNKSNQPRVKVY 103
Query: 1191 RNM--EKPKRLQVVVTPPGSKVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIA 1018
RNM K RLQVVV+P GS VDFVG+NYSGEA A Q C Y+LGVLD+ET+TLKI+PIA
Sbjct: 104 RNMAQRKTNRLQVVVSPSGSNVDFVGSNYSGEAAAAQV-CRYSLGVLDRETRTLKIIPIA 162
Query: 1017 SNKIFRLEPKVGGLDFSNKEPENSAVEELSAQQKTEKMRDKLTNLYGTKKSRKEVIKINS 838
SNKIFRLEP+V + +NK+ +S EL+ + K +KM + LT LYGTKK RK+ +N+
Sbjct: 163 SNKIFRLEPRVRSSETANKDVSSSVKSELTTEDKEDKMGE-LTALYGTKKDRKKRKDLNN 221
Query: 837 LKQADDPDSLNDLDKQIKKVVVNKDALESTDAHTARNIPPHNTSATSPEEAYPLDKIILK 658
LK+ DP+S LD++I++V NK+AL +T A ARNIPPH++SAT+P EAYPLDKIILK
Sbjct: 222 LKKEVDPESQKSLDEKIEQVAFNKEALGNTSALVARNIPPHDSSATTPVEAYPLDKIILK 281
Query: 657 GEWSFLEDIYKFLQGGREVSSNTYPTFISNRIYKLRDIQDEVETKKLSCIFSYITHLIKF 478
G+W FL DIY L+ G EV+SN YPTF+ NRI KL IQDE E +KLSC+FS+ITHL+KF
Sbjct: 282 GDWEFLGDIYGLLEVGAEVASNAYPTFVCNRINKLEGIQDETEKRKLSCVFSFITHLVKF 341
Query: 477 KDLHNMDNRKSAKRHNFPSILHQKFSTLFGEEKIMSPEKH--DXXXXXXXXXXXYADEFR 304
D +MD SAK H PSI+ Q+F T+F + + P + + +AD FR
Sbjct: 342 NDQFSMDRVASAKGHKIPSIIRQRFFTMFTDPGLRKPSRDQINLLISYVLVLTLHADGFR 401
Query: 303 TDFSDIAKDLRMNTIQLRTHYEHLGCKISRQNNISFAILPVPLQFPQTRPKRRRR 139
TD SDIAKDLRM++I LR H+E+LGCK+ R+NN F LPVPL+FP KR+R+
Sbjct: 402 TDPSDIAKDLRMSSIGLRPHFENLGCKLVRENNSIFTTLPVPLKFPSETLKRQRK 456
>ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Glycine
max] gi|734359966|gb|KHN15333.1| DNA-directed RNA
polymerase I subunit rpa49 [Glycine soja]
gi|947063045|gb|KRH12306.1| hypothetical protein
GLYMA_15G165300 [Glycine max]
Length = 424
Score = 414 bits (1063), Expect = e-112
Identities = 215/398 (54%), Positives = 282/398 (70%), Gaps = 2/398 (0%)
Frame = -3
Query: 1326 VQATIQVLQDHSDRAPPLVGYFPSGFDPEESARTGESSSTRVRVLRNMEKPKRLQVVVTP 1147
++ ++V+++H ++ PP+VGYFPSGFDP ++ G S+ +V R+ PKRL++VV P
Sbjct: 36 IEVEVEVVREHPNKTPPVVGYFPSGFDPVKNHGGGPSN---FQVYRHRSMPKRLELVVRP 92
Query: 1146 PGSKVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGGLDFS 967
P S V+FVGT+Y+GEA A + YALGVLDKE TLK+VPIA NKIFRLEPKV G+
Sbjct: 93 PRSSVEFVGTSYAGEA-AARHRAKYALGVLDKEAGTLKVVPIAGNKIFRLEPKVKGVGAF 151
Query: 966 NKEPENSAVEELSAQQKTEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDLDKQI 787
EP NS +EE++ QQK + T+++GTKK ++ K +L+Q +DPDS +LD ++
Sbjct: 152 ENEPANSTLEEMTQQQKFAET----TSIWGTKKDIEKAKKKLALRQDEDPDSQRNLDVKM 207
Query: 786 KKVVVNKDALESTDAHTARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFLQGGR 607
K V VNK ALEST++H +RNIPP++ SAT+P+EAY LDKIILKGEW +LEDIY LQ G
Sbjct: 208 KSVTVNKKALESTESHVSRNIPPYDASATTPQEAYILDKIILKGEWDYLEDIYNNLQRGE 267
Query: 606 EVSSNTYPTFISNRIYKLRDIQDEVETKKLSCIFSYITHLIKFKDLHNMDNRKSAKRHNF 427
E + YPTF+ NRI +LR I+DE E K+LSCIFSYI HLIKFKD H+ D SAK H
Sbjct: 268 EADFSAYPTFVRNRIERLRKIKDESEKKQLSCIFSYINHLIKFKDQHSFD-VLSAKGHKI 326
Query: 426 PSILHQKFSTLF--GEEKIMSPEKHDXXXXXXXXXXXYADEFRTDFSDIAKDLRMNTIQL 253
P+IL KFS +F E K + PEK ++DEFRTD++DIAKDL MN + +
Sbjct: 327 PNILRHKFSNMFAVSESKRLPPEKISLLICYVLVLTLFSDEFRTDYTDIAKDLSMNILPV 386
Query: 252 RTHYEHLGCKISRQNNISFAILPVPLQFPQTRPKRRRR 139
R YEHLGCKISRQ NI +A LPVPL+FP+ R ++R+R
Sbjct: 387 RQLYEHLGCKISRQKNIFYATLPVPLKFPELRQRKRKR 424
>gb|KRH12305.1| hypothetical protein GLYMA_15G165300 [Glycine max]
Length = 412
Score = 412 bits (1060), Expect = e-112
Identities = 215/397 (54%), Positives = 281/397 (70%), Gaps = 2/397 (0%)
Frame = -3
Query: 1323 QATIQVLQDHSDRAPPLVGYFPSGFDPEESARTGESSSTRVRVLRNMEKPKRLQVVVTPP 1144
+ ++V+++H ++ PP+VGYFPSGFDP ++ G S+ +V R+ PKRL++VV PP
Sbjct: 25 EVEVEVVREHPNKTPPVVGYFPSGFDPVKNHGGGPSN---FQVYRHRSMPKRLELVVRPP 81
Query: 1143 GSKVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGGLDFSN 964
S V+FVGT+Y+GEA A + YALGVLDKE TLK+VPIA NKIFRLEPKV G+
Sbjct: 82 RSSVEFVGTSYAGEA-AARHRAKYALGVLDKEAGTLKVVPIAGNKIFRLEPKVKGVGAFE 140
Query: 963 KEPENSAVEELSAQQKTEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDLDKQIK 784
EP NS +EE++ QQK + T+++GTKK ++ K +L+Q +DPDS +LD ++K
Sbjct: 141 NEPANSTLEEMTQQQKFAET----TSIWGTKKDIEKAKKKLALRQDEDPDSQRNLDVKMK 196
Query: 783 KVVVNKDALESTDAHTARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFLQGGRE 604
V VNK ALEST++H +RNIPP++ SAT+P+EAY LDKIILKGEW +LEDIY LQ G E
Sbjct: 197 SVTVNKKALESTESHVSRNIPPYDASATTPQEAYILDKIILKGEWDYLEDIYNNLQRGEE 256
Query: 603 VSSNTYPTFISNRIYKLRDIQDEVETKKLSCIFSYITHLIKFKDLHNMDNRKSAKRHNFP 424
+ YPTF+ NRI +LR I+DE E K+LSCIFSYI HLIKFKD H+ D SAK H P
Sbjct: 257 ADFSAYPTFVRNRIERLRKIKDESEKKQLSCIFSYINHLIKFKDQHSFD-VLSAKGHKIP 315
Query: 423 SILHQKFSTLF--GEEKIMSPEKHDXXXXXXXXXXXYADEFRTDFSDIAKDLRMNTIQLR 250
+IL KFS +F E K + PEK ++DEFRTD++DIAKDL MN + +R
Sbjct: 316 NILRHKFSNMFAVSESKRLPPEKISLLICYVLVLTLFSDEFRTDYTDIAKDLSMNILPVR 375
Query: 249 THYEHLGCKISRQNNISFAILPVPLQFPQTRPKRRRR 139
YEHLGCKISRQ NI +A LPVPL+FP+ R ++R+R
Sbjct: 376 QLYEHLGCKISRQKNIFYATLPVPLKFPELRQRKRKR 412
>ref|XP_009355506.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Pyrus x
bretschneideri]
Length = 438
Score = 411 bits (1056), Expect = e-112
Identities = 219/443 (49%), Positives = 295/443 (66%), Gaps = 5/443 (1%)
Frame = -3
Query: 1455 MDSDEEDTKSQMMLDHXXXXXXXXXXXXXXXXXXXXXXXXXXEVQATIQVLQDHSDRAPP 1276
M+SD EDTKSQ+ +H VQA +QV ++ ++ PP
Sbjct: 1 MESDAEDTKSQLTQNHDTSTPKHKHKKRKTKKATVPTIPT---VQAAVQVYPENPEKTPP 57
Query: 1275 LVGYFPSGFDPEESARTGESSSTRVRVLRNMEKPKRLQVVVTPPGSKVDFVGTNYSGEAE 1096
+V +F SGFDP + + +ST++ + RN + KR+++VV P G+ VDFVGT+Y+G A
Sbjct: 58 IVAHFSSGFDPTKKP---DPNSTKIGLFRNANRAKRVELVVHPDGTNVDFVGTSYTGAAT 114
Query: 1095 AGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGGLDFSNKEPENSAVEELSAQQK 916
+ Q+CNYALGVLDK TQTLKIVPI SNKIFRLEPKV G ++S+ EP SA+ EL+AQ+K
Sbjct: 115 S-DQYCNYALGVLDKATQTLKIVPIVSNKIFRLEPKVRGYNYSDMEPATSALGELTAQEK 173
Query: 915 TEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDLDKQIKKVVVNKDALESTDAHT 736
EK +L NLYGTKKS +E K+ SLKQAD PDSL DLD +IK +VVNK+ALE +A +
Sbjct: 174 AEKQM-QLHNLYGTKKSIRESKKMQSLKQADGPDSLKDLDAKIKHLVVNKEALERAEAQS 232
Query: 735 ARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFLQGGREVSSNTYPTFISNRIYK 556
+R+IPP N SAT+P+EAYPLDKII+ GEW ++DIY LQGG EV + YP F+ N+I K
Sbjct: 233 SRHIPPFNESATTPKEAYPLDKIIITGEWDDVQDIYNKLQGGNEVKWDAYPNFVLNKIQK 292
Query: 555 LRDIQDEVETKKLSCIFSYITHLIKFKDLHNMDNRKSAKRHNFPSILHQKFSTLF----- 391
L++I+ E E KL+CI +YITHLIKFKD + MD SAK H PS L KF +F
Sbjct: 293 LKNIRVEEEKFKLACICTYITHLIKFKDQYTMDGVSSAKGHRIPSSLRNKFLNMFDPAAG 352
Query: 390 GEEKIMSPEKHDXXXXXXXXXXXYADEFRTDFSDIAKDLRMNTIQLRTHYEHLGCKISRQ 211
++ +S EK + + D F+T+ +DIAKDLRM ++ HYE+LGCK++++
Sbjct: 353 SRKQTLSREKTNLLISYVLVLTLHVDAFQTELTDIAKDLRMGEANVKDHYENLGCKLTKK 412
Query: 210 NNISFAILPVPLQFPQTRPKRRR 142
N A LPVPL+FPQ + +R++
Sbjct: 413 NGKPVATLPVPLKFPQEQQRRKK 435
>ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypeptide, putative [Ricinus
communis] gi|223539445|gb|EEF41035.1| DNA-directed RNA
polymerase I 49 kDa polypeptide, putative [Ricinus
communis]
Length = 481
Score = 408 bits (1049), Expect = e-111
Identities = 220/422 (52%), Positives = 278/422 (65%), Gaps = 30/422 (7%)
Frame = -3
Query: 1314 IQVLQDHSDRAPPLVGYFPSGFDPE-------------ESARTGESSSTRVRVLRNMEKP 1174
I+V+ D +D+ PP+VGYFPSG+ P E T S V+ RN ++
Sbjct: 62 IEVIYDQTDKTPPIVGYFPSGYKPSKHNESNNLHDTSNEENATSSLSQPSVKFYRNAQRT 121
Query: 1173 K----------------RLQVVVTPPGSKVDFVGTNYSGEAEAGQQHCNYALGVLDKETQ 1042
K R+++VV+P GS VDFVG +Y GEA A Q C YALGVLDK+T+
Sbjct: 122 KIEKSSNERNEKWRSSERMELVVSPNGSNVDFVGKSYKGEATAAQL-CTYALGVLDKKTK 180
Query: 1041 TLKIVPIASNKIFRLEPKVGGLDFSNKEPENSAVEELSAQQKTEKMRDKLTNLYGTKKSR 862
TLKI+PIA NKIFRLEPK+ G+D S+KEP E+LS + + + LT+ YGTKKS
Sbjct: 181 TLKIMPIAGNKIFRLEPKIQGVDASDKEPSVLENEDLSKENMAVRKKT-LTDTYGTKKSI 239
Query: 861 KEVIKINSLKQADDPDSLNDLDKQIKKVVVNKDALESTDAHTARNIPPHNTSATSPEEAY 682
+ ++ + Q D+P+S DLD++I VVVNK ALE T AH ARNIPPHNTSAT+P+EAY
Sbjct: 240 TQGKRMEIMMQGDNPESRKDLDQKIDNVVVNKAALEDTSAHVARNIPPHNTSATTPQEAY 299
Query: 681 PLDKIILKGEWSFLEDIYKFLQGGREVSSNTYPTFISNRIYKLRDIQDEVETKKLSCIFS 502
PL +IIL GEW +LED+Y+ LQ G + N YP F+ NRI+KLR+IQDEVE K S IFS
Sbjct: 300 PLGRIILTGEWDYLEDLYEILQAGEGAAINAYPVFVRNRIHKLREIQDEVERKTYSRIFS 359
Query: 501 YITHLIKFKDLHNMDNRKSAKRHNFPSILHQKFSTLFGEEKIMSP-EKHDXXXXXXXXXX 325
YITHL+KFKDLH+MD SAK H FPSIL QKF +F E P EK D
Sbjct: 360 YITHLLKFKDLHSMDGVSSAKNHKFPSILRQKFMGMFTPESRKLPVEKIDLLISYVLVLS 419
Query: 324 XYADEFRTDFSDIAKDLRMNTIQLRTHYEHLGCKISRQNNISFAILPVPLQFPQTRPKRR 145
YAD+FRTD +DIAKDLR++ + +RTH+E+LGCKI +N +S A LPVPL+FP R +R
Sbjct: 420 LYADDFRTDPTDIAKDLRVSRVMVRTHFENLGCKIVCENKLSLATLPVPLKFPVQRQRRA 479
Query: 144 RR 139
RR
Sbjct: 480 RR 481
>ref|XP_012472150.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Gossypium
raimondii] gi|763753696|gb|KJB21084.1| hypothetical
protein B456_003G182300 [Gossypium raimondii]
Length = 440
Score = 390 bits (1002), Expect = e-105
Identities = 211/409 (51%), Positives = 280/409 (68%), Gaps = 13/409 (3%)
Frame = -3
Query: 1326 VQATIQVLQDHSDRAPPLVGYFPSGFDPEESARTGESSST---------RVRVLRNMEKP 1174
+Q IQ+ QD ++ PPLV YFPSG++P+ R E S +V+V RNM +
Sbjct: 34 LQVKIQLFQDQPNKIPPLVAYFPSGYNPQTQQRQDEEESNNQNNSPKVPKVKVFRNMAQR 93
Query: 1173 K--RLQVVVTPPGSKVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFR 1000
K RLQVVV+P GS VDFVG++++GEA A Q C Y+LGVLDKE TLKI+PIA+NKIFR
Sbjct: 94 KGNRLQVVVSPGGSNVDFVGSSFTGEAAAAQV-CRYSLGVLDKEAGTLKIIPIATNKIFR 152
Query: 999 LEPKVGGLDFSNKEPENSAVEELSAQQKTEKMRDKLTNLYGTKKSRKEVIKINSLKQADD 820
LEP+V + +N+E NS EL+A + +K+ + LT LYGTK+ RK+ +LK+ D
Sbjct: 153 LEPRVRTAETANEEASNSTKSELTAN-RMDKLGE-LTALYGTKRERKKRKDAINLKKEVD 210
Query: 819 PDSLNDLDKQIKKVVVNKDALESTDAHTARNIPPHNTSATSPEEAYPLDKIILKGEWSFL 640
+S LDK+I++V +K+AL +T + ARNIPPHN SAT+P EAYPLDKIILKG+W FL
Sbjct: 211 SESQKSLDKKIEEVAFDKEALANTSSLIARNIPPHNVSATTPLEAYPLDKIILKGDWDFL 270
Query: 639 EDIYKFLQGGREVSSNTYPTFISNRIYKLRDIQDEVETKKLSCIFSYITHLIKFKDLHNM 460
DIYK QGG +V++N YP F+ NRI KL I+DE + KLSCI SYITHL+KF+D +M
Sbjct: 271 GDIYKLWQGGEKVATNAYPHFVCNRIRKLDAIKDETQQWKLSCILSYITHLMKFRDQFSM 330
Query: 459 DNRKSAKRHNFPSILHQKFSTLF--GEEKIMSPEKHDXXXXXXXXXXXYADEFRTDFSDI 286
+ KS K+HN PSI+H +F LF E KI++ EK + + D FRTD SDI
Sbjct: 331 GHVKSGKKHNIPSIIHHRFLNLFTDPESKILASEKINLFISYVLVLALHVDGFRTDPSDI 390
Query: 285 AKDLRMNTIQLRTHYEHLGCKISRQNNISFAILPVPLQFPQTRPKRRRR 139
A+DLR++ + LR H+ +LGCK+ RQN+I +A LPVPL FP +R+RR
Sbjct: 391 AQDLRISKVDLRQHFLNLGCKLVRQNSILYATLPVPLNFPSQNIRRKRR 439
>ref|XP_011014273.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Populus
euphratica]
Length = 472
Score = 389 bits (999), Expect = e-105
Identities = 206/417 (49%), Positives = 279/417 (66%), Gaps = 25/417 (5%)
Frame = -3
Query: 1314 IQVLQDHSDRAPPLVGYFPSGFDPEESARTGESSSTR--------VRVLRNMEKPK---- 1171
++++ +H D+ PP+VGYFPSG++P ++ ++ V++ RN ++ K
Sbjct: 58 LELVNNHVDKTPPVVGYFPSGYNPHKTNDINDAQEPNLPLAAPPSVKLYRNAQRAKVEKS 117
Query: 1170 ------------RLQVVVTPPGSKVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIV 1027
RL++VV+P GS ++FVG +Y GEA A Q C YALGVLDK TQTLKI+
Sbjct: 118 SGEKNEKGRTSERLELVVSPNGSNIEFVGNSYKGEAMAAQL-CTYALGVLDKTTQTLKIM 176
Query: 1026 PIASNKIFRLEPKVGGLDFSNKEPENSAVEELSAQQKTEKMRDKLTNLYGTKKSRKEVIK 847
PIA NKI RLEPK+ G ++KE N E++A+Q+ ++R +L YG KKS + K
Sbjct: 177 PIAGNKILRLEPKLRGSLAADKEHANFENGEITAEQRAARIR-QLNVQYGPKKSIIQDKK 235
Query: 846 INSLKQADDPDSLNDLDKQIKKVVVNKDALESTDAHTARNIPPHNTSATSPEEAYPLDKI 667
+ +L++ DDP S DL ++I+ +NKDALEST H+ARNIPP+N+SA +P+EAYPLD I
Sbjct: 236 MQALRKGDDPLSQKDLGRKIENAPINKDALESTSGHSARNIPPYNSSAITPQEAYPLDGI 295
Query: 666 ILKGEWSFLEDIYKFLQGGREVSSNTYPTFISNRIYKLRDIQDEVETKKLSCIFSYITHL 487
IL GEW FLEDIYK LQ G EV+SN YPTF+ NRI KLR+IQDE+E K+LSCIFSYITHL
Sbjct: 296 ILTGEWDFLEDIYKILQAGGEVASNAYPTFVCNRIQKLREIQDEMEKKRLSCIFSYITHL 355
Query: 486 IKFKDLHNMDNRKSAKRHNFPSILHQKFSTLFG-EEKIMSPEKHDXXXXXXXXXXXYADE 310
IKFKD H++D SA+ H FPSI+ QKF +F E + +S EK D YAD+
Sbjct: 356 IKFKDQHSLDGAASARNHQFPSIIRQKFLEMFNPETRRLSVEKIDLLISYVLVLTLYADD 415
Query: 309 FRTDFSDIAKDLRMNTIQLRTHYEHLGCKISRQNNISFAILPVPLQFPQTRPKRRRR 139
FRT +D++ DLRMN +++HY +LGCK+ R+ N L VPL+FPQ + K R+R
Sbjct: 416 FRTFPADVSNDLRMNPATVKSHYRNLGCKMEREKNKYLVTLSVPLEFPQPKRKFRKR 472
>ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616137 [Citrus sinensis]
gi|641846247|gb|KDO65131.1| hypothetical protein
CISIN_1g013236mg [Citrus sinensis]
Length = 447
Score = 389 bits (999), Expect = e-105
Identities = 204/401 (50%), Positives = 282/401 (70%), Gaps = 6/401 (1%)
Frame = -3
Query: 1326 VQATIQVLQDHSDRAPPLVGYFPSGFDPEESARTGESSSTRVRVLRNMEKPK----RLQV 1159
V+A +Q + + ++APPLVGYFPS + P+ E +VRV RNM + K R+++
Sbjct: 53 VKAKVQFIPEQPNKAPPLVGYFPSIYKPDVD-HPDEEMRPKVRVYRNMNEKKNRTGRMEL 111
Query: 1158 VVTPPGSKVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGG 979
VV+P S VD+VGT+YSGEA A Q C+YA+GVLD+ TQTLKIVPIA+NKIFRLEP+V G
Sbjct: 112 VVSPRDSSVDYVGTSYSGEAMA-PQFCHYAVGVLDRSTQTLKIVPIAANKIFRLEPRVRG 170
Query: 978 LDFSNKEPENSAVEELSAQQKTEKMRDKLTNLYGTKKSRKEVIKINSLKQADDPDSLNDL 799
D ++K+ E+SA+ + M+ L YGTKKS ++ K+++L + +DP+S DL
Sbjct: 171 SDVADKDAGKG---EISAEVQAN-MKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDL 226
Query: 798 DKQIKKVVVNKDALESTDAHTARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFL 619
++K V +NK+ALEST + T N+PP++ +AT+P++AYPLDKIILKGEW F++DI+ +
Sbjct: 227 ALKMKSVKINKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHV 286
Query: 618 QGGREVSSNTYPTFISNRIYKLRDIQDEVETKKLSCIFSYITHLIKFKDLHNMDNRKSAK 439
G EV S+ YP+F+ NRI+KLR+IQD+VE + L+ IFSYITHL+KFKD H+MD SAK
Sbjct: 287 SAGSEVISDAYPSFVCNRIHKLREIQDDVEKQTLASIFSYITHLVKFKDQHSMDGGASAK 346
Query: 438 RHNFPSILHQKFSTLF--GEEKIMSPEKHDXXXXXXXXXXXYADEFRTDFSDIAKDLRMN 265
+H P ILHQKF T F E K +S +K +AD+FRT+ +DIAKDLRM+
Sbjct: 347 QHRIPKILHQKFLTSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLRMS 406
Query: 264 TIQLRTHYEHLGCKISRQNNISFAILPVPLQFPQTRPKRRR 142
+LR H+E LGCK+ R+ N+ +A LPVPLQFP+ +RRR
Sbjct: 407 EFKLRDHFEKLGCKLLREKNMLYATLPVPLQFPKAIQRRRR 447