BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00004798
         (4164 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008240106.1| PREDICTED: putative ATP-dependent helicase h...   790   0.0  
ref|XP_009337912.1| PREDICTED: putative ATP-dependent helicase h...   764   0.0  
ref|XP_008393251.1| PREDICTED: putative ATP-dependent helicase h...   757   0.0  
ref|XP_010663492.1| PREDICTED: putative ATP-dependent helicase H...   778   0.0  
ref|XP_010663491.1| PREDICTED: putative ATP-dependent helicase H...   768   0.0  
ref|XP_010663490.1| PREDICTED: putative ATP-dependent helicase H...   768   0.0  
ref|XP_006485704.1| PREDICTED: putative ATP-dependent helicase H...   764   0.0  
ref|XP_011464282.1| PREDICTED: putative ATP-dependent helicase H...   718   0.0  
ref|XP_006440816.1| hypothetical protein CICLE_v10018555mg [Citr...   748   0.0  
ref|XP_010260952.1| PREDICTED: putative ATP-dependent helicase h...   751   0.0  
ref|XP_007037645.1| Nucleic acid binding,ATP-dependent helicases...   765   0.0  
ref|XP_012488975.1| PREDICTED: putative ATP-dependent helicase h...   756   0.0  
ref|XP_012488973.1| PREDICTED: putative ATP-dependent helicase h...   755   0.0  
ref|XP_012488977.1| PREDICTED: putative ATP-dependent helicase h...   755   0.0  
ref|XP_012488979.1| PREDICTED: putative ATP-dependent helicase h...   755   0.0  
ref|XP_012080429.1| PREDICTED: putative ATP-dependent helicase h...   749   0.0  
ref|XP_008453310.1| PREDICTED: putative ATP-dependent helicase h...   747   0.0  
ref|XP_008453311.1| PREDICTED: putative ATP-dependent helicase h...   747   0.0  
ref|XP_008453312.1| PREDICTED: putative ATP-dependent helicase h...   747   0.0  
ref|XP_011014683.1| PREDICTED: putative ATP-dependent helicase h...   753   0.0  

>ref|XP_008240106.1| PREDICTED: putative ATP-dependent helicase hrq1 [Prunus mume]
          Length = 1231

 Score =  790 bits (2039), Expect(2) = 0.0
 Identities = 381/501 (76%), Positives = 436/501 (87%)
 Frame = -1

Query: 2736 EGSWIKGKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGK 2557
            +G   KG++VHVEDI AR+  Y E+P E+S+NM SAL   G+++LYSHQAESIQASL+GK
Sbjct: 442  KGIGAKGQVVHVEDIGARRPVYVEVPHELSENMRSALHSIGITQLYSHQAESIQASLSGK 501

Query: 2556 NVVVATMTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSL 2377
            NVVVATMTSSGKSLCYNLPVLE+LSQ+  +CALY+FPTKALAQDQLR+LL +TK  DGSL
Sbjct: 502  NVVVATMTSSGKSLCYNLPVLEVLSQSSSSCALYIFPTKALAQDQLRSLLAMTKGFDGSL 561

Query: 2376 NIGVYDGDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAY 2197
            NIGVYDGDT +EER WLR N RLLITNPDMLH+SILPHH++F RIL N+RF+V+DEAH Y
Sbjct: 562  NIGVYDGDTTQEERTWLRHNSRLLITNPDMLHVSILPHHRRFARILENIRFIVIDEAHIY 621

Query: 2196 KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGS 2017
            KGAFGCHTA ILRRLRRLCSHVYGSDPSFVFSTATSANP +HC ELA+LP  ELI+NDGS
Sbjct: 622  KGAFGCHTAFILRRLRRLCSHVYGSDPSFVFSTATSANPHDHCMELASLPTLELIKNDGS 681

Query: 2016 PSARKLFILWNPVLHQETVSNETNSTMCTTKSAEGIAKVKKSSPILDVSRLFAEMVQHGL 1837
            P+ARKLFILWNP + QETV    N+ M   KS++  A  K SSPILD+S LFAEMVQHGL
Sbjct: 682  PAARKLFILWNPFVDQETVMKNPNNIMENGKSSDESANFKSSSPILDISCLFAEMVQHGL 741

Query: 1836 RCIAFCRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKLCG 1657
            RCIAFC++RKLCELVLCYTREIL++TAPHL+DSICAYRAGYIA++RR IE DFF GKLCG
Sbjct: 742  RCIAFCKTRKLCELVLCYTREILQQTAPHLVDSICAYRAGYIAQNRRRIESDFFDGKLCG 801

Query: 1656 IAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQHF 1477
            IAATNALELGIDVGHIDVTLHLGFPGSI+SLWQQAGRAGRR+ PSLAVYVAF+GPLDQ+F
Sbjct: 802  IAATNALELGIDVGHIDVTLHLGFPGSISSLWQQAGRAGRRDRPSLAVYVAFEGPLDQYF 861

Query: 1476 MKFPRKLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSLKN 1297
            MK+P+KLFGSPIECCH+DA+N+QV+ Q LVCAA+EHPLSL YDEK+FG GL +AI+SLKN
Sbjct: 862  MKYPKKLFGSPIECCHVDAKNQQVLAQQLVCAAHEHPLSLSYDEKFFGSGLDSAIVSLKN 921

Query: 1296 SGYLXXXXXXXXXSKLWNYIG 1234
             GYL         +K WNYIG
Sbjct: 922  RGYLSYDSLCNSSAKFWNYIG 942



 Score =  388 bits (996), Expect(2) = 0.0
 Identities = 229/454 (50%), Positives = 310/454 (68%), Gaps = 16/454 (3%)
 Frame = -2

Query: 4031 MATSDIEIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQ 3852
            MA ++ +IQVRT+ G+S+T+ VSVN ++E+ K LLK++FPPA RS NFHLF+KG KL LQ
Sbjct: 1    MAENERQIQVRTLVGESSTVSVSVNDTIENFKRLLKRSFPPATRSLNFHLFFKGGKLGLQ 60

Query: 3851 RKVGTLDMGNSEFLVLVPFAKRD--SNQTQNSSQPKASMKVPNQPS-ISKFAESAWSDMM 3681
             K+G+L++   EFLVLVPF+K++  +NQTQ S Q KAS+   ++ S IS FA+SAWSDMM
Sbjct: 61   SKIGSLNIKPDEFLVLVPFSKKEPNNNQTQKSDQSKASLNGSDKSSSISNFADSAWSDMM 120

Query: 3680 HDLSYLSDDPVAKAPEFEIAG--NLRNRRDASAGLANSWSSEAKRKRGSIECDDLLYDIL 3507
             DLS L D+   + P   I G  NL +R +A    A   SS AKRK+G ++ DD++ DIL
Sbjct: 121  QDLSSLRDNSSYQTPMEPIIGSFNLGDRTEAMNETATCCSSGAKRKKG-LDSDDIMLDIL 179

Query: 3506 -WAPKSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLS--IRSCSQAFGIGLPTNDGST 3336
              + +S +VLDE+   +F+E L  V+CLSD ++G+CML   +    Q FG GLP ++GS+
Sbjct: 180  RCSRRSKNVLDEHNFTRFVEVLASVSCLSDPYNGDCMLGRRVHLRRQGFGTGLPKSNGSS 239

Query: 3335 CLCPTWLKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRDLEHLSI 3156
            CLCP WLKI++KAFAFLN FSAF+Q +Q RTT  LLE+AL QL KFGV+L ++D+++LS+
Sbjct: 240  CLCPPWLKIIMKAFAFLNTFSAFIQSRQERTTSILLEQALGQLPKFGVELGLKDIKNLSV 299

Query: 3155 ISPKVVSFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCALKRREN 2976
            ISPKVV F N    E S  +A+VII   TE         K   +QM+V  IV  LK RE+
Sbjct: 300  ISPKVVRFVNKNAEETSSGNAIVIINCSTE------DNRKHGCKQMDVPMIVSVLKIRES 353

Query: 2975 SFKSDLWKAVEQLMFITGNE-KATFSLEGLLLSLKDRVTAASSNNRRKAK----GSNGTS 2811
            SFKS+LWKA+E L+F TGNE    FSLE LL+S+K+  TAA  N  ++++     SN   
Sbjct: 354  SFKSNLWKAIEWLLFKTGNEISRDFSLEDLLISVKECGTAARGNEAKQSRITPAASNNFD 413

Query: 2810 SSYSGPKR---CNATNELRPVEMVDHLRKGVGSK 2718
              +S   R   C+ T+ L P EMV+HLRKG+G+K
Sbjct: 414  RKHSAASRTHQCHGTDSLLPEEMVEHLRKGIGAK 447



 Score =  400 bits (1028), Expect = e-108
 Identities = 197/286 (68%), Positives = 228/286 (79%), Gaps = 6/286 (2%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K+PSHSVSIR+IETE+Y+V+D+Q+ +ILEEIEES+AFFQVYEGAVY+ QGKTYLV SL+ 
Sbjct: 945  KMPSHSVSIRSIETERYKVIDQQKKDILEEIEESRAFFQVYEGAVYMNQGKTYLVTSLDL 1004

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRVG------TAARADPCKVTTSWFG 725
            S KIA C  ADLKYYT+ RDCTDIHV+    AY  ++       T ARADPCKVTT+W G
Sbjct: 1005 SRKIASCYVADLKYYTKSRDCTDIHVMGSKYAYRPQLSNIQFSRTTARADPCKVTTTWLG 1064

Query: 724  FHRVERGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVL 545
            +HRV RGSN+I+E VD  LP +SY SQAVWVPVPQS K AV M +LDFRAGLHAASH VL
Sbjct: 1065 YHRVSRGSNEIMEKVDHVLPKYSYESQAVWVPVPQSVKEAVIMKDLDFRAGLHAASHVVL 1124

Query: 544  NVVPLRIICDSLDLAPECPNPHDTRYYPERILLYDQHPGGMGVSMQVQPFFMXXXXXXXX 365
            NVVPLRIIC+  DLAPEC N   TRYYPERILLYD+HPGG GVS+QVQP FM        
Sbjct: 1125 NVVPLRIICNLSDLAPECINTEYTRYYPERILLYDRHPGGSGVSVQVQPIFMELLIAALE 1184

Query: 364  XLSFCCCSGNTGCPNCIQNFACHEYNEVLHKDAAIMIIKGVLDAEE 227
             L+ C CS + GCPNC+Q+FAC EYNE LHK++AIMIIKGVLDAE+
Sbjct: 1185 LLTSCRCSEHGGCPNCLQSFACKEYNEGLHKESAIMIIKGVLDAEK 1230


>ref|XP_009337912.1| PREDICTED: putative ATP-dependent helicase hrq1 [Pyrus x
            bretschneideri]
          Length = 1271

 Score =  764 bits (1974), Expect(2) = 0.0
 Identities = 376/503 (74%), Positives = 428/503 (85%), Gaps = 2/503 (0%)
 Frame = -1

Query: 2736 EGSWIKGKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGK 2557
            EG   KG+IVHVEDI AR+A Y E+P+E+S+NM SAL+  G+++LY+HQAESIQASL+GK
Sbjct: 448  EGLGSKGQIVHVEDISARRAAYVEVPRELSENMRSALRSTGITQLYTHQAESIQASLSGK 507

Query: 2556 NVVVATMTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSL 2377
            NVVVATMTSSGKSLCYNLPVLE LS +  ACALYLFPTKALAQDQLR+LL +TK  +  L
Sbjct: 508  NVVVATMTSSGKSLCYNLPVLEALSHSSSACALYLFPTKALAQDQLRSLLAMTKGFNCDL 567

Query: 2376 NIGVYDGDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAY 2197
            NIGVYDGDTP+EER WLR N RLLITNPDMLH+S+LP+HK F RIL NLRFVV+DEAH Y
Sbjct: 568  NIGVYDGDTPQEERTWLRQNARLLITNPDMLHVSLLPYHKGFRRILENLRFVVIDEAHVY 627

Query: 2196 KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGS 2017
            KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANP +HC ELA+LP  ELI+NDGS
Sbjct: 628  KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPHDHCMELASLPTLELIQNDGS 687

Query: 2016 PSARKLFILWNPV--LHQETVSNETNSTMCTTKSAEGIAKVKKSSPILDVSRLFAEMVQH 1843
            PSARKLF+LWNP+  L +ET S  TN+ M    SA   A    SSP++D+S LFAEMVQH
Sbjct: 688  PSARKLFVLWNPIVNLQRETTSTTTNNVMDNGNSAVENANPHTSSPMMDLSCLFAEMVQH 747

Query: 1842 GLRCIAFCRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKL 1663
            GLRCIAFC++RKLCELVLCYTREIL ETAP+L+DSIC+YR GYIAEDRR IERDFF+GKL
Sbjct: 748  GLRCIAFCKTRKLCELVLCYTREILLETAPNLVDSICSYRGGYIAEDRRKIERDFFNGKL 807

Query: 1662 CGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQ 1483
            CGIAATNALELGIDVGHID TLHLGFPGSI+SLWQQAGRAGRRE  SLAVYVAF GPLDQ
Sbjct: 808  CGIAATNALELGIDVGHIDATLHLGFPGSISSLWQQAGRAGRRERHSLAVYVAFGGPLDQ 867

Query: 1482 HFMKFPRKLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSL 1303
            +FMK P KLFGSPIE CH+DA+N+ V+ QHLVCAA EHPLSL YDE++FG  +++AI+ L
Sbjct: 868  YFMKQPNKLFGSPIERCHVDAKNQMVLAQHLVCAALEHPLSLSYDERFFGSSMNSAIVPL 927

Query: 1302 KNSGYLXXXXXXXXXSKLWNYIG 1234
            KN GYL         +++WNYIG
Sbjct: 928  KNKGYLSLDPSCGSSAEIWNYIG 950



 Score =  390 bits (1003), Expect(2) = 0.0
 Identities = 224/454 (49%), Positives = 300/454 (66%), Gaps = 16/454 (3%)
 Frame = -2

Query: 4031 MATSDIEIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQ 3852
            MA   IEIQVR + G   T+ V V+ +++ LKLLLKQ FPPA  SPNFHLF+KG KL+LQ
Sbjct: 1    MAEGLIEIQVRALEGKPATVSVPVDETIDGLKLLLKQFFPPAKSSPNFHLFFKGEKLRLQ 60

Query: 3851 RKVGTLDMGNSEFLVLVPFAKRDSN--QTQNSSQPKASMKVPNQPSISKFAESAWSDMMH 3678
             ++G L++   EFLVL PF K+D N  +T  S Q K  +  P++ SI KFA+S WSDMM 
Sbjct: 61   SQIGRLNIRPGEFLVLAPFTKKDPNCNETPKSEQTKTPVNCPSKSSIKKFADSVWSDMME 120

Query: 3677 DLSYLSDDPVAKAPEFEIAG--NLRNRRDASAGLANSWSSEAKRKRGSIECDDLLYDILW 3504
            DL++L D+   K P+    G  NL  R + +   A+S S  AKRK G+ +CDD++ DIL 
Sbjct: 121  DLTFLHDNSNDKTPKGPSVGSFNLGGRSEVNDEAASSRSCGAKRKMGTFDCDDIVLDILR 180

Query: 3503 APKSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSC--SQAFGIGLPTNDGSTCL 3330
            + ++ +VLDE   ++FIE L  V+CLSD +S +C+L  R+    Q FG GL   + S+CL
Sbjct: 181  SSRNRNVLDEQNFKRFIEVLETVSCLSDPYSRDCLLWRRAVLRQQGFGTGLHKGNSSSCL 240

Query: 3329 CPTWLKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRDLEHLSIIS 3150
            CP WLKI++KAFAFLN FSAFLQLQQARTT  +LE+AL QLGKFGV+L ++D+EHLSIIS
Sbjct: 241  CPAWLKIIMKAFAFLNTFSAFLQLQQARTTSIVLEQALHQLGKFGVRLSMKDIEHLSIIS 300

Query: 3149 PKVVSFAN-NAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCALKRRENS 2973
            PKVV FAN NA LE S  + LVII   T    + +   K   +QM++++I+   K RE+S
Sbjct: 301  PKVVHFANENAELEGSG-NVLVIINGSTRQNGRNEDLRKYACKQMDISKIISISKIRESS 359

Query: 2972 FKSDLWKAVEQLMFITGNEKA-TFSLEGLLLSLKDRVTAASSNNRRKAKGSNGTSSSY-- 2802
            F+S+LW+AVE LMF TGNE +  FSLE LL S+K+   AA  N  ++ + +   S++Y  
Sbjct: 360  FRSNLWQAVELLMFKTGNETSMDFSLEDLLKSVKECGPAARGNEAKRLRVTRAASNNYFD 419

Query: 2801 ------SGPKRCNATNELRPVEMVDHLRKGVGSK 2718
                  S   RC  T   +  EM+ HLR+G+GSK
Sbjct: 420  RNQSKASRKHRCCLTGSFQSEEMIKHLREGLGSK 453



 Score =  353 bits (907), Expect = 6e-94
 Identities = 168/287 (58%), Positives = 218/287 (75%), Gaps = 1/287 (0%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K+PS SVSIR+I++EKY+V+D+Q+ EILEEIEE KAFFQVY+GAVY+ QG TYLV SL+ 
Sbjct: 953  KMPSRSVSIRSIDSEKYKVIDQQKKEILEEIEEGKAFFQVYKGAVYMNQGNTYLVTSLDT 1012

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRVG-TAARADPCKVTTSWFGFHRVE 710
             SK A C  A+L YYT+PRDCT +H++ G++A+P +V  T+AR D CKVTT W G+  + 
Sbjct: 1013 WSKEALCRAANLDYYTKPRDCTRVHIMGGNMAHPPKVSRTSARTDSCKVTTRWLGYFSIS 1072

Query: 709  RGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVLNVVPL 530
            + +++++E+V+  LP ++Y SQAVWVPVP   + AV   +LDFRAGLHAA+HAVL+VVPL
Sbjct: 1073 KATHEVLESVEHKLPEYTYESQAVWVPVPHWIREAVEAKDLDFRAGLHAATHAVLHVVPL 1132

Query: 529  RIICDSLDLAPECPNPHDTRYYPERILLYDQHPGGMGVSMQVQPFFMXXXXXXXXXLSFC 350
            RIIC+  DLAPECP P D  Y+PERIL YDQH GG GVS+QVQP  M         L+ C
Sbjct: 1133 RIICNLSDLAPECPYPTDKSYFPERILFYDQHRGGTGVSVQVQPILMELFTPAIELLTSC 1192

Query: 349  CCSGNTGCPNCIQNFACHEYNEVLHKDAAIMIIKGVLDAEEQRSKGA 209
             CS   GCPNC+Q+FAC  YNE LH++ AIMI+KGVL+AE   ++G+
Sbjct: 1193 SCSRYGGCPNCVQSFACTAYNEDLHRETAIMILKGVLEAENLNTRGS 1239


>ref|XP_008393251.1| PREDICTED: putative ATP-dependent helicase hrq1 [Malus domestica]
          Length = 1271

 Score =  757 bits (1955), Expect(2) = 0.0
 Identities = 372/503 (73%), Positives = 425/503 (84%), Gaps = 2/503 (0%)
 Frame = -1

Query: 2736 EGSWIKGKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGK 2557
            EG   KG+IVHVEDI AR+A Y E+P+E+S+NM SAL+  G+++LY+HQAESIQASL+GK
Sbjct: 448  EGLGSKGQIVHVEDISARRAAYVEVPQELSENMRSALRSTGITQLYTHQAESIQASLSGK 507

Query: 2556 NVVVATMTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSL 2377
            NVVVATMTSSGKSLCYNLPVLE LS +  ACALYLFPTKALAQDQLR+LL +TK  +  L
Sbjct: 508  NVVVATMTSSGKSLCYNLPVLEALSHSSSACALYLFPTKALAQDQLRSLLAMTKGFNCDL 567

Query: 2376 NIGVYDGDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAY 2197
            NIGVYDGDTP+EER WLR N RLLITNPDMLH+S+LP+HK F RIL NLRFVV+DEAH Y
Sbjct: 568  NIGVYDGDTPQEERTWLRQNARLLITNPDMLHVSLLPYHKGFRRILENLRFVVIDEAHVY 627

Query: 2196 KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGS 2017
            KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANP +HC ELA+LP  ELI+NDGS
Sbjct: 628  KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPHDHCMELASLPTLELIQNDGS 687

Query: 2016 PSARKLFILWNPV--LHQETVSNETNSTMCTTKSAEGIAKVKKSSPILDVSRLFAEMVQH 1843
            PSARKLF+LWNP+  L ++T S  TN+ M    SA   A    SSP++D+S LFAEMVQH
Sbjct: 688  PSARKLFVLWNPIANLQRQTTSTTTNNIMDNGNSAVENANPHTSSPMMDLSCLFAEMVQH 747

Query: 1842 GLRCIAFCRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKL 1663
            GLRCIAFC+SRKLCELVLCYTREIL ETAP+L DSIC+YR GY+AEDRR IERDFF+GKL
Sbjct: 748  GLRCIAFCKSRKLCELVLCYTREILLETAPNLADSICSYRGGYVAEDRRKIERDFFNGKL 807

Query: 1662 CGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQ 1483
            CGIAATNALELGIDVGHID TLHLGFPGSI+SLWQQAGRAGRRE  SLAVYVAF+GPLDQ
Sbjct: 808  CGIAATNALELGIDVGHIDATLHLGFPGSISSLWQQAGRAGRRERHSLAVYVAFEGPLDQ 867

Query: 1482 HFMKFPRKLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSL 1303
            +FMK P KLFGSPIE CH+DA+N+ V+ QHL CAA EHPLS  YDE++FG  +++AI+ L
Sbjct: 868  YFMKQPNKLFGSPIERCHVDAKNQMVLAQHLACAALEHPLSSSYDERFFGSSMNSAIVPL 927

Query: 1302 KNSGYLXXXXXXXXXSKLWNYIG 1234
            KN GYL         +++WNY G
Sbjct: 928  KNKGYLSLDPSCNSSAEIWNYTG 950



 Score =  393 bits (1010), Expect(2) = 0.0
 Identities = 225/454 (49%), Positives = 301/454 (66%), Gaps = 16/454 (3%)
 Frame = -2

Query: 4031 MATSDIEIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQ 3852
            MA   IEIQVR + G   T+ V V+ +++ LKLLLKQ FPPA  SPNFHLF+KG KL+LQ
Sbjct: 1    MAEGQIEIQVRALEGKPATVSVPVDETIDGLKLLLKQFFPPAKNSPNFHLFFKGEKLRLQ 60

Query: 3851 RKVGTLDMGNSEFLVLVPFAKRDSN--QTQNSSQPKASMKVPNQPSISKFAESAWSDMMH 3678
             ++G L++   EFLVL PF K+D N  +T  S Q K     P++ SI KFA+SAWSDMM 
Sbjct: 61   SQIGRLNIRPGEFLVLAPFTKKDPNCNETPKSEQTKTPANCPSKSSIKKFADSAWSDMME 120

Query: 3677 DLSYLSDDPVAKAPEFEIAG--NLRNRRDASAGLANSWSSEAKRKRGSIECDDLLYDILW 3504
            DL++L D+   K P+    G  NL  R + +   A+S +  AKRK G+ +CDD++ DIL 
Sbjct: 121  DLTFLHDNSNDKTPKGPSVGSFNLGGRSEVNDEAASSRACGAKRKMGTFDCDDIVLDILR 180

Query: 3503 APKSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSC--SQAFGIGLPTNDGSTCL 3330
            +  + +VLDE   ++FIE L  V+CLSD +S +C+L  R+    Q FG GL   + S+CL
Sbjct: 181  SSINGNVLDEQNFKRFIEVLETVSCLSDPYSRDCLLWRRAVLRQQGFGTGLHKGNSSSCL 240

Query: 3329 CPTWLKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRDLEHLSIIS 3150
            CP WLKI++KAFAFLN FSAFLQLQQARTT  +LE+AL QLG+FGV+L ++D+EHLSIIS
Sbjct: 241  CPAWLKIIMKAFAFLNTFSAFLQLQQARTTSIILEQALHQLGRFGVRLGMKDIEHLSIIS 300

Query: 3149 PKVVSFAN-NAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCALKRRENS 2973
            PKVV FAN NA LE S  + LVII   T    + +  HK   +QM++++I+   K RE+S
Sbjct: 301  PKVVHFANENAELEGSG-NVLVIINGSTGQNGRNEDHHKYACKQMDISKIISISKIRESS 359

Query: 2972 FKSDLWKAVEQLMFITGNEKA-TFSLEGLLLSLKDRVTAASSNNRRKAKGSNGTSSSY-- 2802
            F+S+LW+AVE LMF TGNE +  FSLE LL S+K+   AA  N  ++ + +   S++Y  
Sbjct: 360  FRSNLWEAVELLMFKTGNETSMDFSLEHLLKSVKECGPAARGNEAKRLRVTRAASNNYFD 419

Query: 2801 ------SGPKRCNATNELRPVEMVDHLRKGVGSK 2718
                  S   RC  T   +P EM+ HLR+G+GSK
Sbjct: 420  RNQSKASRKHRCCLTGSFQPEEMIKHLREGLGSK 453



 Score =  360 bits (925), Expect = 5e-96
 Identities = 171/287 (59%), Positives = 221/287 (77%), Gaps = 1/287 (0%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K+PS SVSIR+I++EKY+V+D+Q+ EILEEIEE KAFFQVY+GAVY+ QG TYLV SL+ 
Sbjct: 953  KMPSRSVSIRSIDSEKYKVIDQQKKEILEEIEEGKAFFQVYKGAVYMNQGNTYLVTSLDT 1012

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRVG-TAARADPCKVTTSWFGFHRVE 710
             SK A C  A L YYT+PRDCT +H++ G++A+P +V  T+AR D CKVTT WFG+  + 
Sbjct: 1013 WSKEALCKAAKLDYYTKPRDCTRVHIMGGNMAHPPKVSRTSARTDSCKVTTRWFGYFSIC 1072

Query: 709  RGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVLNVVPL 530
            + +++++E+V+L LP ++Y SQAVWVPVP   + +V   +LDFRAGLHAA+HAVL+VVPL
Sbjct: 1073 KATHEVLESVELKLPEYTYESQAVWVPVPHWIRESVEAKDLDFRAGLHAATHAVLHVVPL 1132

Query: 529  RIICDSLDLAPECPNPHDTRYYPERILLYDQHPGGMGVSMQVQPFFMXXXXXXXXXLSFC 350
            RIIC+  DLAPECP P D  Y+PERILLYDQH GG GVS+QVQP FM         LS C
Sbjct: 1133 RIICNLSDLAPECPYPTDKSYFPERILLYDQHRGGTGVSVQVQPIFMELFTPAIELLSSC 1192

Query: 349  CCSGNTGCPNCIQNFACHEYNEVLHKDAAIMIIKGVLDAEEQRSKGA 209
             CS + GCPNC+Q+FAC  YNE LH++ AIMI+KGVL+ E   ++G+
Sbjct: 1193 SCSRSGGCPNCVQSFACEAYNEDLHRETAIMILKGVLEEENLNTRGS 1239


>ref|XP_010663492.1| PREDICTED: putative ATP-dependent helicase HRQ1 isoform X3 [Vitis
            vinifera]
          Length = 1244

 Score =  778 bits (2009), Expect(2) = 0.0
 Identities = 383/503 (76%), Positives = 430/503 (85%)
 Frame = -1

Query: 2736 EGSWIKGKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGK 2557
            +G   +G++VHVE+I AR A   EIP E+S+N  SAL+  GV++LYSHQAESIQASL GK
Sbjct: 444  KGMGCQGQMVHVEEICARMAIRVEIPDELSENTKSALEHIGVTRLYSHQAESIQASLGGK 503

Query: 2556 NVVVATMTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSL 2377
            NVVVATMTSSGKSLCYN+PVLE+LSQNLL+CALYLFPTKALAQDQLRALL +TK  D SL
Sbjct: 504  NVVVATMTSSGKSLCYNVPVLEVLSQNLLSCALYLFPTKALAQDQLRALLAMTKGSDVSL 563

Query: 2376 NIGVYDGDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAY 2197
             +GVYDGDT +E+R WLRDN RLLITNPDMLHMSILP H QF RILSNLRFV++DEAHAY
Sbjct: 564  KMGVYDGDTSEEDRMWLRDNARLLITNPDMLHMSILPFHGQFRRILSNLRFVIIDEAHAY 623

Query: 2196 KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGS 2017
            KGAFGCHTA ILRRLRRLC HVYGSDPSF+F TATSANP +H  ELANLP  ELI NDGS
Sbjct: 624  KGAFGCHTAFILRRLRRLCHHVYGSDPSFIFCTATSANPRDHAMELANLPTLELIHNDGS 683

Query: 2016 PSARKLFILWNPVLHQETVSNETNSTMCTTKSAEGIAKVKKSSPILDVSRLFAEMVQHGL 1837
            PS  K F LWNP L  +TVS  + S+   +KSA+    VK+SSPI ++S LFAEM+QHGL
Sbjct: 684  PSGPKFFALWNPALCSKTVSKRSTSSTNISKSADENVIVKRSSPIWEISCLFAEMIQHGL 743

Query: 1836 RCIAFCRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKLCG 1657
            RCIAFC+SRKLCELVL YTREIL+ETAPHL+DSICAYRAGY+A+DRR IE DFFSGKLCG
Sbjct: 744  RCIAFCKSRKLCELVLSYTREILQETAPHLVDSICAYRAGYVAQDRRRIESDFFSGKLCG 803

Query: 1656 IAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQHF 1477
            IAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGR+GRRE PSLA+YVAF+GPLDQ+F
Sbjct: 804  IAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRERPSLAIYVAFEGPLDQYF 863

Query: 1476 MKFPRKLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSLKN 1297
            MKFP+KLF  PIECCH+DAQN+QV+EQHLVCAA EHPLSLLYDEKYFG GL++AI SL N
Sbjct: 864  MKFPQKLFRRPIECCHVDAQNQQVLEQHLVCAALEHPLSLLYDEKYFGSGLNSAITSLTN 923

Query: 1296 SGYLXXXXXXXXXSKLWNYIGHA 1228
             GYL         S++WNYIGHA
Sbjct: 924  RGYLSFDPSRGSSSRIWNYIGHA 946



 Score =  331 bits (849), Expect(2) = 0.0
 Identities = 197/459 (42%), Positives = 285/459 (62%), Gaps = 23/459 (5%)
 Frame = -2

Query: 4031 MATSDIEIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQ 3852
            MA  + EI+VR++SG+STT+ +S N ++EDLKLLL QTFPPA  SPNFHLF+KG KL LQ
Sbjct: 4    MAEREREIEVRSLSGESTTVSISENKTIEDLKLLLIQTFPPASNSPNFHLFFKGAKLSLQ 63

Query: 3851 RKVGTLDMGNSEFLVLVPFAKRDSNQTQNSSQPKASMKVPNQPSISKFAESAWSDMMHDL 3672
             K+ +  +G+ +F+VLVPF K+     +  +Q   + +VPNQ  +S FA+SAWSDMM DL
Sbjct: 64   SKLNSHPIGSGKFMVLVPFTKK----VRQCNQSATTSEVPNQSPVSNFADSAWSDMMQDL 119

Query: 3671 SYLS----DDPVAKAPEFEIAGNLRNR--RDASAGLANSWSSEAKRKR-------GSIEC 3531
              LS    ++         +   +RN    +ASA    +++ E KRK+       GS   
Sbjct: 120  RTLSNMSNNENQTNFDSGSVIEGVRNELMEEASA----TYTLERKRKKFHGDKQEGS--S 173

Query: 3530 DDLLYDILWAPKSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSCSQAFGIGLPT 3351
            DDL+  +L +P  +  LD+  CE  I  L  VNCL D+ SG+CML +R    A+G    +
Sbjct: 174  DDLILSLLKSPCKI-FLDKQNCEILIRVLESVNCLLDMRSGSCML-LREVGLAYGDATQS 231

Query: 3350 -NDGSTCLCPTWLKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRD 3174
             +  S CLCP WLK ++K F FLN+FSAFLQLQQ   TL  L+E LD LG+FG ++ + D
Sbjct: 232  GSKSSLCLCPAWLKKIMKTFTFLNIFSAFLQLQQGHITLIHLKEGLDHLGEFGFQVDMED 291

Query: 3173 LEHLSIISPK--------VVSFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQM 3018
            +EHLS++ PK        VV FA N +  R+  D L++I   T++++QV+   ++  +Q+
Sbjct: 292  IEHLSVLCPKADMLFHSQVVHFATNGMPSRNLGDNLIVINSSTQHKDQVEDNSRTAQKQV 351

Query: 3017 NVAEIVCALKRRENSFKSDLWKAVEQLMFITGNEKA-TFSLEGLLLSLKDRVTAASSNNR 2841
             +++IV  +K+ E+ FK+ LW+AV+ LM   GNE A  FSLE LL+S+K+     +   R
Sbjct: 352  PISKIVSVMKKLESCFKTHLWRAVKVLMRKNGNEMAMLFSLEDLLISVKEGGAGKAKQAR 411

Query: 2840 RKAKGSNGTSSSYSGPKRCNATNELRPVEMVDHLRKGVG 2724
            R     + T+S+ S   +C+ TN L P+EMV+HLRKG+G
Sbjct: 412  RSWSAVSSTNSAQS---KCHDTNPLLPMEMVEHLRKGMG 447



 Score =  398 bits (1023), Expect = e-107
 Identities = 192/286 (67%), Positives = 226/286 (79%), Gaps = 6/286 (2%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K+PSH+VSIRAIETEKY+V+DK R+E+LEEIEESKAFFQVY+GAVY+ QGKTYLV+ L+ 
Sbjct: 947  KIPSHAVSIRAIETEKYKVIDKGRDELLEEIEESKAFFQVYDGAVYMHQGKTYLVKELDI 1006

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRVG------TAARADPCKVTTSWFG 725
            S K+A C +ADLKYYT+ RD TDIHVI G IAY  R+       T A+   C+VTT+WFG
Sbjct: 1007 SRKLALCQQADLKYYTKTRDYTDIHVIGGEIAYQARISRIQFARTTAQVHDCRVTTTWFG 1066

Query: 724  FHRVERGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVL 545
            F R+ +GSN++ +TV+L+LP +SY SQAVWV VPQS K AV ++   FRAGLHAASHAVL
Sbjct: 1067 FRRIWKGSNKVFDTVELSLPTYSYQSQAVWVRVPQSVKTAVEIHRFSFRAGLHAASHAVL 1126

Query: 544  NVVPLRIICDSLDLAPECPNPHDTRYYPERILLYDQHPGGMGVSMQVQPFFMXXXXXXXX 365
            NVVPL +IC+S DLAPEC NPHDTRY PERILLYD HPGG G S QV+  F         
Sbjct: 1127 NVVPLYVICNSSDLAPECSNPHDTRYIPERILLYDPHPGGTGFSAQVRSHFTELLTAALE 1186

Query: 364  XLSFCCCSGNTGCPNCIQNFACHEYNEVLHKDAAIMIIKGVLDAEE 227
             L  CCC+G+TGCPNCIQN AC EYNE+LHKDAAIMIIKGVL+AEE
Sbjct: 1187 LLMSCCCTGDTGCPNCIQNLACGEYNELLHKDAAIMIIKGVLEAEE 1232


>ref|XP_010663491.1| PREDICTED: putative ATP-dependent helicase HRQ1 isoform X2 [Vitis
            vinifera]
          Length = 1251

 Score =  768 bits (1983), Expect(2) = 0.0
 Identities = 383/518 (73%), Positives = 430/518 (83%), Gaps = 15/518 (2%)
 Frame = -1

Query: 2736 EGSWIKGKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGK 2557
            +G   +G++VHVE+I AR A   EIP E+S+N  SAL+  GV++LYSHQAESIQASL GK
Sbjct: 436  KGMGCQGQMVHVEEICARMAIRVEIPDELSENTKSALEHIGVTRLYSHQAESIQASLGGK 495

Query: 2556 NVVVATMTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSL 2377
            NVVVATMTSSGKSLCYN+PVLE+LSQNLL+CALYLFPTKALAQDQLRALL +TK  D SL
Sbjct: 496  NVVVATMTSSGKSLCYNVPVLEVLSQNLLSCALYLFPTKALAQDQLRALLAMTKGSDVSL 555

Query: 2376 NIGVYDGDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAY 2197
             +GVYDGDT +E+R WLRDN RLLITNPDMLHMSILP H QF RILSNLRFV++DEAHAY
Sbjct: 556  KMGVYDGDTSEEDRMWLRDNARLLITNPDMLHMSILPFHGQFRRILSNLRFVIIDEAHAY 615

Query: 2196 KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGS 2017
            KGAFGCHTA ILRRLRRLC HVYGSDPSF+F TATSANP +H  ELANLP  ELI NDGS
Sbjct: 616  KGAFGCHTAFILRRLRRLCHHVYGSDPSFIFCTATSANPRDHAMELANLPTLELIHNDGS 675

Query: 2016 PSARKLFILWNPVLHQETVSNETNSTMCTTKSAEGIAKVKKSSPILDVSRLFAEMVQHGL 1837
            PS  K F LWNP L  +TVS  + S+   +KSA+    VK+SSPI ++S LFAEM+QHGL
Sbjct: 676  PSGPKFFALWNPALCSKTVSKRSTSSTNISKSADENVIVKRSSPIWEISCLFAEMIQHGL 735

Query: 1836 RCIAFCRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAE---------------D 1702
            RCIAFC+SRKLCELVL YTREIL+ETAPHL+DSICAYRAGY+A+               D
Sbjct: 736  RCIAFCKSRKLCELVLSYTREILQETAPHLVDSICAYRAGYVAQVCCFCLLTEISSKSLD 795

Query: 1701 RRSIERDFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPS 1522
            RR IE DFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGR+GRRE PS
Sbjct: 796  RRRIESDFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRERPS 855

Query: 1521 LAVYVAFDGPLDQHFMKFPRKLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEK 1342
            LA+YVAF+GPLDQ+FMKFP+KLF  PIECCH+DAQN+QV+EQHLVCAA EHPLSLLYDEK
Sbjct: 856  LAIYVAFEGPLDQYFMKFPQKLFRRPIECCHVDAQNQQVLEQHLVCAALEHPLSLLYDEK 915

Query: 1341 YFGFGLSTAIMSLKNSGYLXXXXXXXXXSKLWNYIGHA 1228
            YFG GL++AI SL N GYL         S++WNYIGHA
Sbjct: 916  YFGSGLNSAITSLTNRGYLSFDPSRGSSSRIWNYIGHA 953



 Score =  338 bits (868), Expect(2) = 0.0
 Identities = 191/445 (42%), Positives = 278/445 (62%), Gaps = 9/445 (2%)
 Frame = -2

Query: 4031 MATSDIEIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQ 3852
            MA  + EI+VR++SG+STT+ +S N ++EDLKLLL QTFPPA  SPNFHLF+KG KL LQ
Sbjct: 4    MAEREREIEVRSLSGESTTVSISENKTIEDLKLLLIQTFPPASNSPNFHLFFKGAKLSLQ 63

Query: 3851 RKVGTLDMGNSEFLVLVPFAKRDSNQTQNSSQPKASMKVPNQPSISKFAESAWSDMMHDL 3672
             K+ +  +G+ +F+VLVPF K+     +  +Q   + +VPNQ  +S FA+SAWSDMM DL
Sbjct: 64   SKLNSHPIGSGKFMVLVPFTKK----VRQCNQSATTSEVPNQSPVSNFADSAWSDMMQDL 119

Query: 3671 SYLSD----DPVAKAPEFEIAGNLRNRRDASAGLANSWSSEAKRKRGSIE---CDDLLYD 3513
              LS+    +         +   +RN     A    +   + K+  G  +    DDL+  
Sbjct: 120  RTLSNMSNNENQTNFDSGSVIEGVRNELMEEASATYTLERKRKKFHGDKQEGSSDDLILS 179

Query: 3512 ILWAPKSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSCSQAFGIGLPTNDGST- 3336
            +L +P  +  LD+  CE  I  L  VNCL D+ SG+CML +R    A+G    +   S+ 
Sbjct: 180  LLKSPCKI-FLDKQNCEILIRVLESVNCLLDMRSGSCML-LREVGLAYGDATQSGSKSSL 237

Query: 3335 CLCPTWLKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRDLEHLSI 3156
            CLCP WLK ++K F FLN+FSAFLQLQQ   TL  L+E LD LG+FG ++ + D+EHLS+
Sbjct: 238  CLCPAWLKKIMKTFTFLNIFSAFLQLQQGHITLIHLKEGLDHLGEFGFQVDMEDIEHLSV 297

Query: 3155 ISPKVVSFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCALKRREN 2976
            + PKVV FA N +  R+  D L++I   T++++QV+   ++  +Q+ +++IV  +K+ E+
Sbjct: 298  LCPKVVHFATNGMPSRNLGDNLIVINSSTQHKDQVEDNSRTAQKQVPISKIVSVMKKLES 357

Query: 2975 SFKSDLWKAVEQLMFITGNEKA-TFSLEGLLLSLKDRVTAASSNNRRKAKGSNGTSSSYS 2799
             FK+ LW+AV+ LM   GNE A  FSLE LL+S+K+     +   RR     + T+S+ S
Sbjct: 358  CFKTHLWRAVKVLMRKNGNEMAMLFSLEDLLISVKEGGAGKAKQARRSWSAVSSTNSAQS 417

Query: 2798 GPKRCNATNELRPVEMVDHLRKGVG 2724
               +C+ TN L P+EMV+HLRKG+G
Sbjct: 418  ---KCHDTNPLLPMEMVEHLRKGMG 439



 Score =  398 bits (1023), Expect = e-107
 Identities = 192/286 (67%), Positives = 226/286 (79%), Gaps = 6/286 (2%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K+PSH+VSIRAIETEKY+V+DK R+E+LEEIEESKAFFQVY+GAVY+ QGKTYLV+ L+ 
Sbjct: 954  KIPSHAVSIRAIETEKYKVIDKGRDELLEEIEESKAFFQVYDGAVYMHQGKTYLVKELDI 1013

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRVG------TAARADPCKVTTSWFG 725
            S K+A C +ADLKYYT+ RD TDIHVI G IAY  R+       T A+   C+VTT+WFG
Sbjct: 1014 SRKLALCQQADLKYYTKTRDYTDIHVIGGEIAYQARISRIQFARTTAQVHDCRVTTTWFG 1073

Query: 724  FHRVERGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVL 545
            F R+ +GSN++ +TV+L+LP +SY SQAVWV VPQS K AV ++   FRAGLHAASHAVL
Sbjct: 1074 FRRIWKGSNKVFDTVELSLPTYSYQSQAVWVRVPQSVKTAVEIHRFSFRAGLHAASHAVL 1133

Query: 544  NVVPLRIICDSLDLAPECPNPHDTRYYPERILLYDQHPGGMGVSMQVQPFFMXXXXXXXX 365
            NVVPL +IC+S DLAPEC NPHDTRY PERILLYD HPGG G S QV+  F         
Sbjct: 1134 NVVPLYVICNSSDLAPECSNPHDTRYIPERILLYDPHPGGTGFSAQVRSHFTELLTAALE 1193

Query: 364  XLSFCCCSGNTGCPNCIQNFACHEYNEVLHKDAAIMIIKGVLDAEE 227
             L  CCC+G+TGCPNCIQN AC EYNE+LHKDAAIMIIKGVL+AEE
Sbjct: 1194 LLMSCCCTGDTGCPNCIQNLACGEYNELLHKDAAIMIIKGVLEAEE 1239


>ref|XP_010663490.1| PREDICTED: putative ATP-dependent helicase HRQ1 isoform X1 [Vitis
            vinifera]
          Length = 1259

 Score =  768 bits (1983), Expect(2) = 0.0
 Identities = 383/518 (73%), Positives = 430/518 (83%), Gaps = 15/518 (2%)
 Frame = -1

Query: 2736 EGSWIKGKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGK 2557
            +G   +G++VHVE+I AR A   EIP E+S+N  SAL+  GV++LYSHQAESIQASL GK
Sbjct: 444  KGMGCQGQMVHVEEICARMAIRVEIPDELSENTKSALEHIGVTRLYSHQAESIQASLGGK 503

Query: 2556 NVVVATMTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSL 2377
            NVVVATMTSSGKSLCYN+PVLE+LSQNLL+CALYLFPTKALAQDQLRALL +TK  D SL
Sbjct: 504  NVVVATMTSSGKSLCYNVPVLEVLSQNLLSCALYLFPTKALAQDQLRALLAMTKGSDVSL 563

Query: 2376 NIGVYDGDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAY 2197
             +GVYDGDT +E+R WLRDN RLLITNPDMLHMSILP H QF RILSNLRFV++DEAHAY
Sbjct: 564  KMGVYDGDTSEEDRMWLRDNARLLITNPDMLHMSILPFHGQFRRILSNLRFVIIDEAHAY 623

Query: 2196 KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGS 2017
            KGAFGCHTA ILRRLRRLC HVYGSDPSF+F TATSANP +H  ELANLP  ELI NDGS
Sbjct: 624  KGAFGCHTAFILRRLRRLCHHVYGSDPSFIFCTATSANPRDHAMELANLPTLELIHNDGS 683

Query: 2016 PSARKLFILWNPVLHQETVSNETNSTMCTTKSAEGIAKVKKSSPILDVSRLFAEMVQHGL 1837
            PS  K F LWNP L  +TVS  + S+   +KSA+    VK+SSPI ++S LFAEM+QHGL
Sbjct: 684  PSGPKFFALWNPALCSKTVSKRSTSSTNISKSADENVIVKRSSPIWEISCLFAEMIQHGL 743

Query: 1836 RCIAFCRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAE---------------D 1702
            RCIAFC+SRKLCELVL YTREIL+ETAPHL+DSICAYRAGY+A+               D
Sbjct: 744  RCIAFCKSRKLCELVLSYTREILQETAPHLVDSICAYRAGYVAQVCCFCLLTEISSKSLD 803

Query: 1701 RRSIERDFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPS 1522
            RR IE DFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGR+GRRE PS
Sbjct: 804  RRRIESDFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRERPS 863

Query: 1521 LAVYVAFDGPLDQHFMKFPRKLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEK 1342
            LA+YVAF+GPLDQ+FMKFP+KLF  PIECCH+DAQN+QV+EQHLVCAA EHPLSLLYDEK
Sbjct: 864  LAIYVAFEGPLDQYFMKFPQKLFRRPIECCHVDAQNQQVLEQHLVCAALEHPLSLLYDEK 923

Query: 1341 YFGFGLSTAIMSLKNSGYLXXXXXXXXXSKLWNYIGHA 1228
            YFG GL++AI SL N GYL         S++WNYIGHA
Sbjct: 924  YFGSGLNSAITSLTNRGYLSFDPSRGSSSRIWNYIGHA 961



 Score =  331 bits (849), Expect(2) = 0.0
 Identities = 197/459 (42%), Positives = 285/459 (62%), Gaps = 23/459 (5%)
 Frame = -2

Query: 4031 MATSDIEIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQ 3852
            MA  + EI+VR++SG+STT+ +S N ++EDLKLLL QTFPPA  SPNFHLF+KG KL LQ
Sbjct: 4    MAEREREIEVRSLSGESTTVSISENKTIEDLKLLLIQTFPPASNSPNFHLFFKGAKLSLQ 63

Query: 3851 RKVGTLDMGNSEFLVLVPFAKRDSNQTQNSSQPKASMKVPNQPSISKFAESAWSDMMHDL 3672
             K+ +  +G+ +F+VLVPF K+     +  +Q   + +VPNQ  +S FA+SAWSDMM DL
Sbjct: 64   SKLNSHPIGSGKFMVLVPFTKK----VRQCNQSATTSEVPNQSPVSNFADSAWSDMMQDL 119

Query: 3671 SYLS----DDPVAKAPEFEIAGNLRNR--RDASAGLANSWSSEAKRKR-------GSIEC 3531
              LS    ++         +   +RN    +ASA    +++ E KRK+       GS   
Sbjct: 120  RTLSNMSNNENQTNFDSGSVIEGVRNELMEEASA----TYTLERKRKKFHGDKQEGS--S 173

Query: 3530 DDLLYDILWAPKSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSCSQAFGIGLPT 3351
            DDL+  +L +P  +  LD+  CE  I  L  VNCL D+ SG+CML +R    A+G    +
Sbjct: 174  DDLILSLLKSPCKI-FLDKQNCEILIRVLESVNCLLDMRSGSCML-LREVGLAYGDATQS 231

Query: 3350 -NDGSTCLCPTWLKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRD 3174
             +  S CLCP WLK ++K F FLN+FSAFLQLQQ   TL  L+E LD LG+FG ++ + D
Sbjct: 232  GSKSSLCLCPAWLKKIMKTFTFLNIFSAFLQLQQGHITLIHLKEGLDHLGEFGFQVDMED 291

Query: 3173 LEHLSIISPK--------VVSFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQM 3018
            +EHLS++ PK        VV FA N +  R+  D L++I   T++++QV+   ++  +Q+
Sbjct: 292  IEHLSVLCPKADMLFHSQVVHFATNGMPSRNLGDNLIVINSSTQHKDQVEDNSRTAQKQV 351

Query: 3017 NVAEIVCALKRRENSFKSDLWKAVEQLMFITGNEKA-TFSLEGLLLSLKDRVTAASSNNR 2841
             +++IV  +K+ E+ FK+ LW+AV+ LM   GNE A  FSLE LL+S+K+     +   R
Sbjct: 352  PISKIVSVMKKLESCFKTHLWRAVKVLMRKNGNEMAMLFSLEDLLISVKEGGAGKAKQAR 411

Query: 2840 RKAKGSNGTSSSYSGPKRCNATNELRPVEMVDHLRKGVG 2724
            R     + T+S+ S   +C+ TN L P+EMV+HLRKG+G
Sbjct: 412  RSWSAVSSTNSAQS---KCHDTNPLLPMEMVEHLRKGMG 447



 Score =  398 bits (1023), Expect = e-107
 Identities = 192/286 (67%), Positives = 226/286 (79%), Gaps = 6/286 (2%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K+PSH+VSIRAIETEKY+V+DK R+E+LEEIEESKAFFQVY+GAVY+ QGKTYLV+ L+ 
Sbjct: 962  KIPSHAVSIRAIETEKYKVIDKGRDELLEEIEESKAFFQVYDGAVYMHQGKTYLVKELDI 1021

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRVG------TAARADPCKVTTSWFG 725
            S K+A C +ADLKYYT+ RD TDIHVI G IAY  R+       T A+   C+VTT+WFG
Sbjct: 1022 SRKLALCQQADLKYYTKTRDYTDIHVIGGEIAYQARISRIQFARTTAQVHDCRVTTTWFG 1081

Query: 724  FHRVERGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVL 545
            F R+ +GSN++ +TV+L+LP +SY SQAVWV VPQS K AV ++   FRAGLHAASHAVL
Sbjct: 1082 FRRIWKGSNKVFDTVELSLPTYSYQSQAVWVRVPQSVKTAVEIHRFSFRAGLHAASHAVL 1141

Query: 544  NVVPLRIICDSLDLAPECPNPHDTRYYPERILLYDQHPGGMGVSMQVQPFFMXXXXXXXX 365
            NVVPL +IC+S DLAPEC NPHDTRY PERILLYD HPGG G S QV+  F         
Sbjct: 1142 NVVPLYVICNSSDLAPECSNPHDTRYIPERILLYDPHPGGTGFSAQVRSHFTELLTAALE 1201

Query: 364  XLSFCCCSGNTGCPNCIQNFACHEYNEVLHKDAAIMIIKGVLDAEE 227
             L  CCC+G+TGCPNCIQN AC EYNE+LHKDAAIMIIKGVL+AEE
Sbjct: 1202 LLMSCCCTGDTGCPNCIQNLACGEYNELLHKDAAIMIIKGVLEAEE 1247


>ref|XP_006485704.1| PREDICTED: putative ATP-dependent helicase HRQ1-like [Citrus
            sinensis]
          Length = 1236

 Score =  764 bits (1972), Expect(2) = 0.0
 Identities = 381/502 (75%), Positives = 424/502 (84%)
 Frame = -1

Query: 2736 EGSWIKGKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGK 2557
            +G   +G++VHVEDI ARKA   EIP  +  N  SALK  G+SKLYSHQAESI ASLAGK
Sbjct: 440  KGIGSQGQMVHVEDIGARKAVLVEIPDALLDNTKSALKSTGISKLYSHQAESIMASLAGK 499

Query: 2556 NVVVATMTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSL 2377
            NVVVATMTSSGKSLCYNLPVLE LS +L + ALY+FPTKALAQDQLRALL +TK  D S+
Sbjct: 500  NVVVATMTSSGKSLCYNLPVLEALSHDLSSSALYMFPTKALAQDQLRALLAMTKAFDASI 559

Query: 2376 NIGVYDGDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAY 2197
            +IGVYDGDT +++R WLRDN RLLITNPDMLHMSILP+H QF RILSNLRFVV+DEAHAY
Sbjct: 560  DIGVYDGDTTQKDRMWLRDNARLLITNPDMLHMSILPYHGQFSRILSNLRFVVIDEAHAY 619

Query: 2196 KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGS 2017
            KGAFGCHTALILRRL RLCSHVYGSDPSFVFSTATSANP EHC ELANL   ELI+NDGS
Sbjct: 620  KGAFGCHTALILRRLCRLCSHVYGSDPSFVFSTATSANPREHCMELANLSTLELIQNDGS 679

Query: 2016 PSARKLFILWNPVLHQETVSNETNSTMCTTKSAEGIAKVKKSSPILDVSRLFAEMVQHGL 1837
            P A+KLF+LWNP     +V N++ + +  T++A      K SSPI +VS LFAEMVQHGL
Sbjct: 680  PCAQKLFVLWNPTSCLRSVLNKSQTDIDDTRNAAN----KTSSPISEVSYLFAEMVQHGL 735

Query: 1836 RCIAFCRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKLCG 1657
            RCIAFCRSRKLCELVL YTREILEETAPHL+DSIC YRAGY+AEDRR IERDFF GKLCG
Sbjct: 736  RCIAFCRSRKLCELVLSYTREILEETAPHLVDSICVYRAGYVAEDRRRIERDFFGGKLCG 795

Query: 1656 IAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQHF 1477
            +AATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGR+GRRE PSLAVYVAF+GPLDQ+F
Sbjct: 796  VAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRERPSLAVYVAFEGPLDQYF 855

Query: 1476 MKFPRKLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSLKN 1297
            MK+P KLF SPIECCHIDAQN +V+EQHLVCAA EHPLSL+YDEKYFG GLS+ I +LKN
Sbjct: 856  MKYPEKLFKSPIECCHIDAQNHKVLEQHLVCAALEHPLSLIYDEKYFGSGLSSGITTLKN 915

Query: 1296 SGYLXXXXXXXXXSKLWNYIGH 1231
             GYL         +K++ YIGH
Sbjct: 916  RGYLSSDPSLDSSAKIFEYIGH 937



 Score =  318 bits (814), Expect(2) = 0.0
 Identities = 182/448 (40%), Positives = 283/448 (63%), Gaps = 10/448 (2%)
 Frame = -2

Query: 4031 MATSDIEIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQ 3852
            M   + +I+VR+++G++TT+ +S   +V DLKLLLK  FPPA  SPNFHLF+KGVK+ + 
Sbjct: 1    MEERERKIEVRSLTGETTTVTMSSGKTVHDLKLLLKLNFPPASASPNFHLFFKGVKMSVL 60

Query: 3851 RKVGTLDMGNSEFLVLVPFAKRDSNQTQNSSQPKASMKVPNQPSIS-KFAESAWSDMMHD 3675
             +V        EFLVL+PF+K++  Q + +   + S     +  IS KFA+S +SDMM +
Sbjct: 61   SQVSNFPTAPGEFLVLIPFSKKEKPQIEKTGLFETSSDYAKETLISNKFADSTYSDMMQE 120

Query: 3674 LSYLSDDPVAKAPEFEIAGNLRNRRDASAGLANSWSSEAKRKRGSIECDDL---LYDILW 3504
             S L ++        +   N  N      G  +S   E KRKRG+ ECDD     YD LW
Sbjct: 121  FSSLHEEESNSVSNDKPECN--NAYSMPFGCISSDPLETKRKRGA-ECDDQGGRPYDFLW 177

Query: 3503 A---PKSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSCSQAFG--IGLPTNDGS 3339
            +     S + L+   CEKF+E L  VNCLSD +SG CML   +  ++ G  +   + D S
Sbjct: 178  SVMRSTSKNALERQNCEKFVEVLESVNCLSDPYSGKCMLLREASRRSTGREMNKSSGDNS 237

Query: 3338 TCLCPTWLKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRDLEHLS 3159
            +CLCP WLK +++AFAF+++FSA LQL++ +  L+ ++ AL+QL KFGV++ I D+E+L+
Sbjct: 238  SCLCPVWLKKIMEAFAFVSIFSAHLQLRREKVILSHVKGALNQLEKFGVRVGIEDIENLA 297

Query: 3158 IISPKVVSFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCALKRRE 2979
            ++ PKVV FAN+ +  +++ D++VII   TE +++V+    S  + +++++I  A+K+RE
Sbjct: 298  VLCPKVVQFANDDMESKNYDDSIVIINVSTEERDKVEDNLGSGQKAISLSKIFNAMKKRE 357

Query: 2978 NSFKSDLWKAVEQLMFITGNEKATFSLEGLLLSLKDRVTAASSNNRRKAKGS-NGTSSSY 2802
             SFK++LW+AV  LM        + S+E LL  +K+R T    N  ++A+ S + TSSS+
Sbjct: 358  RSFKTNLWEAVNLLMCKLQKRVMSLSVEDLLTYVKERSTDMRGNEVKRARRSQSSTSSSH 417

Query: 2801 SGPKRCNATNELRPVEMVDHLRKGVGSK 2718
            S  +RC+  ++L P+EMV+HLRKG+GS+
Sbjct: 418  SFQRRCSDKSQLLPLEMVEHLRKGIGSQ 445



 Score =  375 bits (963), Expect = e-100
 Identities = 180/291 (61%), Positives = 224/291 (76%), Gaps = 6/291 (2%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K+PSH++SIRAIE+E+Y V+D Q NE+LEEIEESKAFFQVYEGAVY+ QG TYLV+ L  
Sbjct: 939  KMPSHTISIRAIESERYEVIDMQSNEVLEEIEESKAFFQVYEGAVYMHQGHTYLVKELNL 998

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRVG------TAARADPCKVTTSWFG 725
            SSKIA C +ADLKY+T+ RD TDIHV  G+ AY T++       T A+A  C VTT+WFG
Sbjct: 999  SSKIALCQKADLKYFTKTRDYTDIHVSGGNNAYATKISKDQLTKTTAQALACTVTTTWFG 1058

Query: 724  FHRVERGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVL 545
            F+R+ RGS  I +TV+L LP +SY SQAVW+ VPQS K AV   N  FR+GLHAASHA+L
Sbjct: 1059 FYRLWRGSGIIFDTVELYLPKYSYESQAVWIQVPQSVK-AVVEQNFSFRSGLHAASHALL 1117

Query: 544  NVVPLRIICDSLDLAPECPNPHDTRYYPERILLYDQHPGGMGVSMQVQPFFMXXXXXXXX 365
            +VVP+ + C+  DLAPECPNPHD+RY+PERILLYD+HPGG GVS Q+QP+F         
Sbjct: 1118 HVVPIYVRCNFSDLAPECPNPHDSRYFPERILLYDRHPGGTGVSKQIQPYFTELLVAALE 1177

Query: 364  XLSFCCCSGNTGCPNCIQNFACHEYNEVLHKDAAIMIIKGVLDAEEQRSKG 212
             ++ C C G +GCPNC+QN  CHEYNE++HK+AAIMIIKGVL+AE+   +G
Sbjct: 1178 LVTSCHCLGESGCPNCVQNLDCHEYNELIHKEAAIMIIKGVLEAEKSFFEG 1228


>ref|XP_011464282.1| PREDICTED: putative ATP-dependent helicase HRQ1 [Fragaria vesca
            subsp. vesca]
          Length = 1201

 Score =  718 bits (1853), Expect(2) = 0.0
 Identities = 357/494 (72%), Positives = 404/494 (81%)
 Frame = -1

Query: 2715 KIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGKNVVVATM 2536
            KIVHVEDI ARKA + E+P+E+++NM SAL   G+++LYSHQAESIQAS+ GKNVVVATM
Sbjct: 448  KIVHVEDIGARKAVHVEVPQELTENMRSALHSVGITQLYSHQAESIQASVTGKNVVVATM 507

Query: 2535 TSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSLNIGVYDG 2356
            TSSGKSLCYNLPV+E LSQ+  ACALYLFPTKALAQDQLRA   ++K   GSLN+G+YDG
Sbjct: 508  TSSGKSLCYNLPVIEALSQSSSACALYLFPTKALAQDQLRAFSAMSKGFCGSLNVGIYDG 567

Query: 2355 DTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAYKGAFGCH 2176
            DT ++ER  LR N RLLITNPDMLH+SILPHH++F RIL+NLR+VV+DEAH YKGAFGCH
Sbjct: 568  DTNQQERTRLRQNARLLITNPDMLHVSILPHHRKFGRILANLRYVVIDEAHVYKGAFGCH 627

Query: 2175 TALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGSPSARKLF 1996
            TALILRRLRRLCSHVYGS PSFVFSTATSANP EHC ELANLP  ELI+NDGSP+ARKLF
Sbjct: 628  TALILRRLRRLCSHVYGSTPSFVFSTATSANPREHCMELANLPTLELIQNDGSPAARKLF 687

Query: 1995 ILWNPVLHQETVSNETNSTMCTTKSAEGIAKVKKSSPILDVSRLFAEMVQHGLRCIAFCR 1816
            ILWN                               SPI D+S LFAEMVQHGLRCIAFC+
Sbjct: 688  ILWN----------------------------SDGSPIEDISVLFAEMVQHGLRCIAFCK 719

Query: 1815 SRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKLCGIAATNAL 1636
            +RKLCELV C TREIL++TAPHL DSI +YR GY+AEDRR IE D F+GKLCGIAATNAL
Sbjct: 720  TRKLCELVFCNTREILQQTAPHLADSISSYRGGYMAEDRRRIESDLFNGKLCGIAATNAL 779

Query: 1635 ELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQHFMKFPRKL 1456
            ELGIDVGHIDVTLHLGFPGSIASLWQQAGR+GRRE PSLAVYVAF+GPLDQ+FMK P KL
Sbjct: 780  ELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRERPSLAVYVAFEGPLDQYFMKHPNKL 839

Query: 1455 FGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSLKNSGYLXXX 1276
            FGSPIECCH+DA+N+QV+EQHL CAA EHPLSL +DEK+FG GL   IMSLK++GYL   
Sbjct: 840  FGSPIECCHVDAKNQQVLEQHLACAALEHPLSLFHDEKFFGSGLDRGIMSLKSTGYL--- 896

Query: 1275 XXXXXXSKLWNYIG 1234
                  + +WNYIG
Sbjct: 897  --RLSENSIWNYIG 908



 Score =  352 bits (904), Expect(2) = 0.0
 Identities = 217/457 (47%), Positives = 286/457 (62%), Gaps = 24/457 (5%)
 Frame = -2

Query: 4031 MATSDIEIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAH-RSPNFHLFYKGVKLKL 3855
            MA S I+I VRT++G++TT+  SVN +V DLKLLL  +FPPA   SPNFHLF+KG KLKL
Sbjct: 1    MAASRIQITVRTVTGEATTVSASVNDTVSDLKLLLNHSFPPATTNSPNFHLFFKGEKLKL 60

Query: 3854 QRKVGTLDMGNSEFLVLVPFAKRD-SNQTQNSSQPKA-SMKVPNQPSISKFAESAWSDMM 3681
            Q ++G L +   EFLVLVPF K+  +N++Q   Q +  S+    + S+SKFA S WSDMM
Sbjct: 61   QSRIGALSIEPGEFLVLVPFVKKVVNNRSQKCDQSEPFSVATSAKGSMSKFANSVWSDMM 120

Query: 3680 HDLSYLSDD------PVAKAPEFEIAGNLRNRRDASAGLANSWSSEAKRKRGSIECDDLL 3519
             DLSYL DD       V+    F++ G            +   S EAKRKRG + CDD++
Sbjct: 121  QDLSYLRDDLSNGTASVSSIGSFDVGGG-----------SEDCSREAKRKRG-VGCDDMI 168

Query: 3518 YDILWAPKSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSCS-QAFGIGLPTNDG 3342
             D+L A +S  VLDE    + +E L  VNCLSD +SG+CML  R  S Q  G+GL    G
Sbjct: 169  LDMLRASRSKSVLDEQNFRRIVELLESVNCLSDPYSGDCMLWRRKASLQGCGLGLHNGSG 228

Query: 3341 STCLCPTWLKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRDLEHL 3162
            ++CLCP WLK ++KAFAFLN FSA +QLQQ RTT  L+E+AL+QL  FGVKL ++D+E+L
Sbjct: 229  NSCLCPDWLKKIMKAFAFLNNFSALVQLQQERTTSTLVEQALEQLATFGVKLGMQDVENL 288

Query: 3161 SIISPKVVSFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCALKRR 2982
            S ISPKVV F      E +  +ALVI +   E     +  H+S  +QM+V++IV  LK  
Sbjct: 289  SFISPKVVLFLKEN-AEATFGNALVITECSVEQNHGDRNSHESDCKQMDVSKIVNELKMH 347

Query: 2981 ENSFKSDLWKAVEQLMFITGNEKATFSLEGLLLSLKDRVTAASSNNRRKA---------- 2832
            E+SFKS+LW+AVE LMFI  NE +  SLE  L+ +K+   AA  N   +A          
Sbjct: 348  ESSFKSNLWEAVESLMFIKRNEIS--SLEDFLIYVKECGAAARGNKVNQAMRSHTASTTD 405

Query: 2831 --KGSNGTSSSYSGPKR--CNATNELRPVEMVDHLRK 2733
              K  +  S++ S  KR  C+ T+ L PVEMV+HLRK
Sbjct: 406  SDKNQSAASTTRSTKKRAGCHRTDPLLPVEMVEHLRK 442



 Score =  371 bits (953), Expect = 3e-99
 Identities = 182/290 (62%), Positives = 223/290 (76%), Gaps = 7/290 (2%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K+PSHSVSIR+IE EKY+V+D Q NEI EEIEESKAFFQVYEGAVY+ QGKTYLV SL+ 
Sbjct: 911  KMPSHSVSIRSIEREKYKVMDHQENEI-EEIEESKAFFQVYEGAVYLNQGKTYLVTSLDL 969

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAY--PTRVG-----TAARADPCKVTTSWF 728
              KIA+C E++L +YT+ RD TDI V+  ++AY  P ++      T ARADPC+VTT+WF
Sbjct: 970  KEKIAWCEESNLNFYTKTRDRTDIDVVGCNVAYSAPPKLSNQFSRTTARADPCRVTTTWF 1029

Query: 727  GFHRVERGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAV 548
            GF+R+++G N I++ VDL LP +SY SQAVWVPVP S   AV   NL++RAGLHAASHAV
Sbjct: 1030 GFYRIQKGCNTILDKVDLQLPKYSYASQAVWVPVPPSIIEAVKSENLEYRAGLHAASHAV 1089

Query: 547  LNVVPLRIICDSLDLAPECPNPHDTRYYPERILLYDQHPGGMGVSMQVQPFFMXXXXXXX 368
            L+VVPLRIIC+  DLAPEC +PH++ Y+PERILLYD+HPGG G+ +Q+QP FM       
Sbjct: 1090 LHVVPLRIICNLSDLAPECADPHESSYFPERILLYDKHPGGTGICVQIQPIFMELLATAL 1149

Query: 367  XXLSFCCCSGNTGCPNCIQNFACHEYNEVLHKDAAIMIIKGVLDAEEQRS 218
              L+ C C    GCPNC+Q+F C  YNEVLHKDAAIMIIKGVLDA +  S
Sbjct: 1150 ELLTSCHCGEYDGCPNCVQSFCCRSYNEVLHKDAAIMIIKGVLDANKSPS 1199


>ref|XP_006440816.1| hypothetical protein CICLE_v10018555mg [Citrus clementina]
            gi|557543078|gb|ESR54056.1| hypothetical protein
            CICLE_v10018555mg [Citrus clementina]
          Length = 1216

 Score =  748 bits (1931), Expect(2) = 0.0
 Identities = 375/502 (74%), Positives = 413/502 (82%)
 Frame = -1

Query: 2736 EGSWIKGKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGK 2557
            +G   +G++VHVEDI ARKA   EIP  +S N  SALK  G+SKLYSHQAESI ASLAGK
Sbjct: 445  KGIGSQGQMVHVEDISARKAVLVEIPDALSDNTKSALKSTGISKLYSHQAESIMASLAGK 504

Query: 2556 NVVVATMTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSL 2377
            NVVVATMTSSGKSLCYNLPVLE LS +L + ALY+FPTKALAQDQLRALL +TK  D S+
Sbjct: 505  NVVVATMTSSGKSLCYNLPVLEALSHDLSSSALYMFPTKALAQDQLRALLAMTKAFDASI 564

Query: 2376 NIGVYDGDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAY 2197
            ++GVYDGDT +++R WLRDN RLLITNPDMLHMSILP+H QF RILSNLRFVV+DEAHAY
Sbjct: 565  DVGVYDGDTSQKDRMWLRDNARLLITNPDMLHMSILPYHGQFSRILSNLRFVVIDEAHAY 624

Query: 2196 KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGS 2017
            KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANP EHC ELANL   ELI+NDGS
Sbjct: 625  KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPREHCLELANLSTLELIQNDGS 684

Query: 2016 PSARKLFILWNPVLHQETVSNETNSTMCTTKSAEGIAKVKKSSPILDVSRLFAEMVQHGL 1837
            P A+KLF+LWNP                             +S +  VS LFAEMVQHGL
Sbjct: 685  PCAQKLFVLWNP-----------------------------TSCLRSVSYLFAEMVQHGL 715

Query: 1836 RCIAFCRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKLCG 1657
            RCIAFCRSRKLCELVL YTREILEETAPHL+DSIC YRAGY+AEDRR IERDFF GKLCG
Sbjct: 716  RCIAFCRSRKLCELVLSYTREILEETAPHLVDSICVYRAGYVAEDRRRIERDFFGGKLCG 775

Query: 1656 IAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQHF 1477
            +AATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGR+GRRE PSLAVYVAF+GPLDQ+F
Sbjct: 776  VAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRERPSLAVYVAFEGPLDQYF 835

Query: 1476 MKFPRKLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSLKN 1297
            MK+P KLF SPIECCHIDAQN +V+EQHLVCAA EHPLSL+YDEKYFG GLS+AI +LKN
Sbjct: 836  MKYPEKLFKSPIECCHIDAQNHKVLEQHLVCAALEHPLSLIYDEKYFGSGLSSAITTLKN 895

Query: 1296 SGYLXXXXXXXXXSKLWNYIGH 1231
             GYL         +K++ YIGH
Sbjct: 896  RGYLSSDPSLDSSAKIFEYIGH 917



 Score =  313 bits (801), Expect(2) = 0.0
 Identities = 183/453 (40%), Positives = 283/453 (62%), Gaps = 15/453 (3%)
 Frame = -2

Query: 4031 MATSDIEIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQ 3852
            M   + +I+VR+++G++TT+ +S   +V DLKLLLK  FPPA  SPNFHLF+KGVK+ +Q
Sbjct: 1    MEERERKIEVRSLTGETTTVTMSSGKTVHDLKLLLKLNFPPASASPNFHLFFKGVKMSVQ 60

Query: 3851 RKVGTLDMGNSEFLVLVPFAKRDSNQTQNSSQPKASMKVPNQPSIS-KFAESAWSDMMHD 3675
             +V        EFLVL+PF+K++  Q + +   + S     +  IS KFA+S +SDMM +
Sbjct: 61   SQVSNFPTAPGEFLVLIPFSKKEKPQIEKTGLFETSSDYAKETLISNKFADSTYSDMMQE 120

Query: 3674 LSYLSDDPVAKAPEFEIAGNLRNRRDASAGLANSWSSEAKRKRGSIECDD---LLYDILW 3504
             S L ++        +   N  N      G  +S   E KRKRG+ EC+D     YD LW
Sbjct: 121  FSSLHEEESNSVNNDKPECN--NAYSMPFGCISSDPLETKRKRGA-ECNDQGGRPYDFLW 177

Query: 3503 A---PKSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSCSQAFG--IGLPTNDGS 3339
            +     S + L+   CEKF+E L  VNCLSD +SG CML   +  ++ G  +     D S
Sbjct: 178  SVMRSTSKNALEGQNCEKFVEVLESVNCLSDPYSGKCMLLREASRRSTGREMNKSRGDNS 237

Query: 3338 TCLCPTWLKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRDLEHLS 3159
            +CLCP WLK +++AFAF+++FSA LQL++ +  L+ ++ AL+QL KFGV++ I D+E+L+
Sbjct: 238  SCLCPVWLKKIVEAFAFVSIFSAHLQLRREKVILSHVKGALNQLEKFGVRVGIEDIENLA 297

Query: 3158 IISPK-----VVSFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCA 2994
            ++ PK     VV FAN+ +  ++H D++VII   TE +++V+    S  + +++++I  A
Sbjct: 298  VLCPKLCISQVVQFANDDMESKNHDDSIVIINVSTEERDKVEDNLGSGQKAISLSKIFNA 357

Query: 2993 LKRRENSFKSDLWKAVEQLMFITGNEKATFSLEGLLLSLKDRVTAASSNNRRKAKGS-NG 2817
            +K+RE SFK++LW+AV  LM        + S+E LL  +K+R T    N  ++A+ S + 
Sbjct: 358  MKKRERSFKTNLWEAVNLLMCKLQKRVMSLSVEDLLTYVKERSTDVRGNEVKRARRSQSS 417

Query: 2816 TSSSYSGPKRCNATNELRPVEMVDHLRKGVGSK 2718
            TSSS+S  +RC+  ++L P+EMV+HLRKG+GS+
Sbjct: 418  TSSSHSFQRRCSDKSQLLPLEMVEHLRKGIGSQ 450



 Score =  375 bits (963), Expect = e-100
 Identities = 180/291 (61%), Positives = 224/291 (76%), Gaps = 6/291 (2%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K+PSH++SIRAIE+E+Y V+D Q NE+LEEIEESKAFFQVYEGAVY+ QG TYLV+ L  
Sbjct: 919  KMPSHTISIRAIESERYEVIDMQSNEVLEEIEESKAFFQVYEGAVYMHQGHTYLVKELNL 978

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRVG------TAARADPCKVTTSWFG 725
            SSKIA C +ADLKY+T+ RD TDIHV  G+ AY T++       T A+A  C VTT+WFG
Sbjct: 979  SSKIALCQKADLKYFTKTRDYTDIHVSGGNNAYATKISKDQLTKTTAQALACTVTTTWFG 1038

Query: 724  FHRVERGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVL 545
            F+R+ RGS  I +TV+L LP +SY SQAVW+ VPQS K AV   N  FR+GLHAASHA+L
Sbjct: 1039 FYRLWRGSGIIFDTVELYLPKYSYESQAVWIQVPQSVK-AVVEQNFSFRSGLHAASHALL 1097

Query: 544  NVVPLRIICDSLDLAPECPNPHDTRYYPERILLYDQHPGGMGVSMQVQPFFMXXXXXXXX 365
            +VVP+ + C+  DLAPECPNPHD+RY+PERILLYD+HPGG GVS Q+QP+F         
Sbjct: 1098 HVVPIYVRCNFSDLAPECPNPHDSRYFPERILLYDRHPGGTGVSKQIQPYFTELLVAALE 1157

Query: 364  XLSFCCCSGNTGCPNCIQNFACHEYNEVLHKDAAIMIIKGVLDAEEQRSKG 212
             ++ C C G +GCPNC+QN  CHEYNE++HK+AAIMIIKGVL+AE+   +G
Sbjct: 1158 LVTSCRCLGESGCPNCVQNLDCHEYNELIHKEAAIMIIKGVLEAEKSFFEG 1208


>ref|XP_010260952.1| PREDICTED: putative ATP-dependent helicase hrq1 [Nelumbo nucifera]
          Length = 1232

 Score =  751 bits (1938), Expect(2) = 0.0
 Identities = 373/511 (72%), Positives = 428/511 (83%), Gaps = 6/511 (1%)
 Frame = -1

Query: 2736 EGSWIKGKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGK 2557
            +G   +G+IVHVE+I AR A + EIP+ +S N  S LK  G+S+LY HQAESIQASL+GK
Sbjct: 438  KGIGSQGQIVHVEEIGARMAVHVEIPESLSGNTRSLLKQVGISRLYCHQAESIQASLSGK 497

Query: 2556 NVVVATMTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSL 2377
            NVVVATMTSSGKSLCYNLPVLE LSQNL +CA+YLFPTKALAQDQLRALL +T+  + S+
Sbjct: 498  NVVVATMTSSGKSLCYNLPVLEALSQNLCSCAIYLFPTKALAQDQLRALLAMTERSNFSI 557

Query: 2376 NIGVYDGDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAY 2197
            NIGVYDGDT +E+R WLRD+ RLLITNPDMLHMSILP H QF+RILSNLRFV++DEAHAY
Sbjct: 558  NIGVYDGDTSQEDRMWLRDSARLLITNPDMLHMSILPFHGQFQRILSNLRFVIIDEAHAY 617

Query: 2196 KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGS 2017
            KGAFGCHTALILRRLRRLC HVYGSDPSFVFSTATSANP EH  ELA+LP  ELI NDGS
Sbjct: 618  KGAFGCHTALILRRLRRLCCHVYGSDPSFVFSTATSANPREHAMELASLPTLELIHNDGS 677

Query: 2016 PSARKLFILWNPVLHQETVSNETNSTMCTTKSAEGIAKVKKSSPILDVSRLFAEMVQHGL 1837
            P   KLF LWNP LH +TVS +T   M   K A+     ++SSPIL++S LFAEMVQHGL
Sbjct: 678  PCGPKLFTLWNPPLHFKTVS-KTQDRMNENKPADSEIIARRSSPILELSCLFAEMVQHGL 736

Query: 1836 RCIAFCRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKLCG 1657
            RCIAFC++RKL E+VLCYTREIL+ETAPHL+DSICAYRAGYIA+DRR IE +FF+GKLCG
Sbjct: 737  RCIAFCKTRKLTEIVLCYTREILQETAPHLVDSICAYRAGYIAQDRRRIESEFFNGKLCG 796

Query: 1656 IAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQHF 1477
            +AATNALELGIDVGHIDVTLHLGFPGS+ASLWQQAGR+GRR   SLAVYVAF+GPLDQ+F
Sbjct: 797  VAATNALELGIDVGHIDVTLHLGFPGSVASLWQQAGRSGRRGKESLAVYVAFEGPLDQYF 856

Query: 1476 MKFPRKLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSLKN 1297
            MKFP++LFGSPIE CH+DA N+QV+EQHL+CAA EHPLSLLYDEKYFG GL  AIM+L  
Sbjct: 857  MKFPQRLFGSPIESCHVDAHNQQVLEQHLLCAALEHPLSLLYDEKYFGSGLHGAIMALTE 916

Query: 1296 SGYLXXXXXXXXXSKLWNYIG------HAVS 1222
             G+L         +K+W+YIG      HA+S
Sbjct: 917  KGFLSCDLSRDLPAKIWSYIGQEKKPSHAIS 947



 Score =  305 bits (782), Expect(2) = 0.0
 Identities = 188/453 (41%), Positives = 276/453 (60%), Gaps = 15/453 (3%)
 Frame = -2

Query: 4031 MATSDIEIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQ 3852
            M  S+ +IQVR+++G+STT+ +S NS++E+LKL+LK +F PA  SPNFHLF+KG K+ L 
Sbjct: 1    MEVSERKIQVRSLAGESTTISISPNSTIEELKLMLKDSFAPAKNSPNFHLFFKGAKMSLG 60

Query: 3851 RKVGTLDMGNSEFLVLVPFAKRDSNQTQN--SSQPKASMKVPNQPSISKFAESAWSDMMH 3678
             ++ +  +G SEF+VLVPF K+D  QTQ     Q     KVP+Q + S FA+ AWSDMM 
Sbjct: 61   SRINSYSVGQSEFVVLVPFNKKDRRQTQYILPQQGTEPPKVPSQSTTSPFADLAWSDMMR 120

Query: 3677 DLSYLSDDPVAK-APEFEIAGNLRNRRDASAG-LANSWSSEAKRKR------GSIECDDL 3522
            DLS LS +P ++  P+    G      D   G  +++ +S+AKR R           D L
Sbjct: 121  DLSSLSKNPPSEIQPDLTPYGRNAQGSDTLFGESSDARTSKAKRMRVLDGDQRERLPDGL 180

Query: 3521 LYDILWAPKSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSCSQAFGIGLPTND- 3345
            L +IL +  + +VLDE+ C +F++ L  V+CLSD  SG+C+L          +G    D 
Sbjct: 181  LKNILCSTNT-NVLDEHGCGRFLQVLESVDCLSDPQSGSCLLFRE-------VGFAEKDK 232

Query: 3344 GSTCLCPTWLKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRDLEH 3165
               C CP+WLKI+LKAFAFLN+FS FLQ+QQ  TT + L+EAL+Q+ ++G+ + I D+EH
Sbjct: 233  KKLCHCPSWLKIILKAFAFLNIFSGFLQMQQKFTTWDCLQEALEQMRRYGLDVGISDMEH 292

Query: 3164 LSIISPKVVSFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCALKR 2985
            +S++ PKVV     A       DA+VI++   E  +Q    H   ++Q++++ I+  +K+
Sbjct: 293  VSVLCPKVVRLGIQATGAAQMDDAIVIVRSSAELADQP--DHPKAAKQVSISAIMNKIKK 350

Query: 2984 RENSFKSDLWKAVEQLMFITGNEKAT---FSLEGLLLSLKDR-VTAASSNNRRKAKGSNG 2817
            RE  FK +L  AV  L+  + +       FSLE LL+S+KD    +  S  +   +  + 
Sbjct: 351  REGVFKRNLRAAVNSLVGKSMSRNMVNQLFSLEDLLISIKDSGYVSKGSEAKNTRRCCSI 410

Query: 2816 TSSSYSGPKRCNATNELRPVEMVDHLRKGVGSK 2718
            TSSS S   RC  T+ L PVEMV+HLRKG+GS+
Sbjct: 411  TSSSQSVQTRCYETSVLLPVEMVEHLRKGIGSQ 443



 Score =  379 bits (974), Expect = e-101
 Identities = 182/289 (62%), Positives = 225/289 (77%), Gaps = 6/289 (2%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K PSH++SIRAIETE+Y+V+D +RNEILEEIEESKAF+QVYEGAVY+ QG+TYLV+ L+ 
Sbjct: 940  KKPSHAISIRAIETERYKVIDSKRNEILEEIEESKAFYQVYEGAVYMHQGQTYLVKVLDL 999

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRV------GTAARADPCKVTTSWFG 725
            S+KIA C EADLKYYT+ RD TDIH I G IAYP  +       T A+A  CKVTT+WFG
Sbjct: 1000 SAKIALCHEADLKYYTKTRDYTDIHFIGGDIAYPVGIFDTQHPRTIAQARTCKVTTTWFG 1059

Query: 724  FHRVERGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVL 545
            F+R+ R SNQI + V+L+LP FSY SQAVW+ VPQS K  V + N  FRAGLHAASHA+L
Sbjct: 1060 FYRIWRASNQIFDAVELSLPKFSYESQAVWIRVPQSIKTEVEIQNFSFRAGLHAASHAIL 1119

Query: 544  NVVPLRIICDSLDLAPECPNPHDTRYYPERILLYDQHPGGMGVSMQVQPFFMXXXXXXXX 365
            NVVPL I+C+S DLA EC NPH+TRY+PERILLYD+HPGG+G+S+++QP F         
Sbjct: 1120 NVVPLYIMCNSSDLASECANPHETRYFPERILLYDEHPGGIGISLKLQPLFGELLTAALE 1179

Query: 364  XLSFCCCSGNTGCPNCIQNFACHEYNEVLHKDAAIMIIKGVLDAEEQRS 218
             L+ C C G  GCPNC+Q+ +CHEYNEVL K+AAIMI++ V++AE   S
Sbjct: 1180 LLTTCQCLGAAGCPNCVQSLSCHEYNEVLDKNAAIMILQAVVEAENLNS 1228


>ref|XP_007037645.1| Nucleic acid binding,ATP-dependent helicases,ATP
            binding,helicases,ATP-dependent helicases isoform 1
            [Theobroma cacao] gi|508774890|gb|EOY22146.1| Nucleic
            acid binding,ATP-dependent helicases,ATP
            binding,helicases,ATP-dependent helicases isoform 1
            [Theobroma cacao]
          Length = 1208

 Score =  765 bits (1976), Expect(2) = 0.0
 Identities = 380/495 (76%), Positives = 422/495 (85%)
 Frame = -1

Query: 2715 KIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGKNVVVATM 2536
            ++VHVE+I ARKA+Y EIPKE+S N  SAL+  G++KLYSHQAESI ASL+GKNVVVATM
Sbjct: 420  QMVHVENIGARKASYVEIPKELSDNTKSALQSIGINKLYSHQAESIMASLSGKNVVVATM 479

Query: 2535 TSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSLNIGVYDG 2356
            TSSGKS+CYNLPVLE LS NL +CALYLFPTKALAQDQLRALL +    D S+NIGVYDG
Sbjct: 480  TSSGKSVCYNLPVLEALSHNLSSCALYLFPTKALAQDQLRALLAIINGFDCSINIGVYDG 539

Query: 2355 DTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAYKGAFGCH 2176
            DT ++ER WLRDN RLLITNPDMLHMSILP H+QF RILSNL FVVVDEAH YKGAFGCH
Sbjct: 540  DTSQKERTWLRDNARLLITNPDMLHMSILPLHRQFSRILSNLSFVVVDEAHTYKGAFGCH 599

Query: 2175 TALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGSPSARKLF 1996
            TALILRRL RLCSHVYGSDPSFVFSTATSANP EHC ELANL   ELIENDGSPS+ KLF
Sbjct: 600  TALILRRLCRLCSHVYGSDPSFVFSTATSANPREHCMELANLSTLELIENDGSPSSEKLF 659

Query: 1995 ILWNPVLHQETVSNETNSTMCTTKSAEGIAKVKKSSPILDVSRLFAEMVQHGLRCIAFCR 1816
            +LWNP L   T  ++++  +    +++     K  SPI +VS LFAEMVQHGLRCIAFCR
Sbjct: 660  VLWNPALCLRTELDKSDHDIDARNASD-----KSLSPISEVSYLFAEMVQHGLRCIAFCR 714

Query: 1815 SRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKLCGIAATNAL 1636
            SRKLCELVLCYTREILEETAPHL++SI AYRAGY+AEDRR IE DFF GKLCGIAATNAL
Sbjct: 715  SRKLCELVLCYTREILEETAPHLVNSISAYRAGYVAEDRRKIESDFFGGKLCGIAATNAL 774

Query: 1635 ELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQHFMKFPRKL 1456
            ELGIDVGHIDVTLHLGFPGSIASLWQQAGR+GRRE PSLAVYVAF+GPLDQ+FMKFP KL
Sbjct: 775  ELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRERPSLAVYVAFEGPLDQYFMKFPEKL 834

Query: 1455 FGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSLKNSGYLXXX 1276
            F SPIECCHID QN+QV+EQHLVCAA EHPLSLLYDEKYFG GL++AI +LK+ GYL   
Sbjct: 835  FRSPIECCHIDTQNQQVLEQHLVCAALEHPLSLLYDEKYFGSGLNSAITALKSRGYLISD 894

Query: 1275 XXXXXXSKLWNYIGH 1231
                  +K+W+YIGH
Sbjct: 895  HSSDPLAKIWSYIGH 909



 Score =  288 bits (737), Expect(2) = 0.0
 Identities = 172/440 (39%), Positives = 262/440 (59%), Gaps = 10/440 (2%)
 Frame = -2

Query: 4013 EIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQRKVGTL 3834
            EIQVRT+S +ST +  S   ++ DLKLLLK +FPPA  SPNFHLF+KG KL LQ KV +L
Sbjct: 3    EIQVRTLSNESTVITTSPEKTINDLKLLLKLSFPPASSSPNFHLFFKGTKLNLQSKVSSL 62

Query: 3833 DMGNSEFLVLVPFAKRDSNQTQNSSQPKASMKVPNQPSISKFAESAWSDMMHDLSYLSDD 3654
             + + EF VL+PF K+D  + +  S         N  + + FA+S +SDMM + S L D+
Sbjct: 63   SIQSGEFFVLIPFTKKDKPRIEKPSFSN------NASTATSFADSTYSDMMQEFSSLRDE 116

Query: 3653 PVAKAPEFEIAGNLRNRRDASAGLANSWSSEAKRKRG-SIECDDL----LYDILW---AP 3498
                      +GN       +    N+   ++KRK G +I+ D+      YD LW     
Sbjct: 117  ----------SGNFGEDNSNN----NNVYFKSKRKEGVTIDRDEKKEGRAYDFLWNVLRS 162

Query: 3497 KSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSCSQAFGIGLPTNDGSTCLCPTW 3318
               D+ ++  C+KF+E L  VNCLS  +SG CML   +  ++       ++ ++CLCP W
Sbjct: 163  SDGDLFEKKNCDKFVEVLRSVNCLSSPYSGKCMLLSEAKIRS------RDEQASCLCPVW 216

Query: 3317 LKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRDLEHLSIISPKVV 3138
            LK +++AFAFL++ SAFLQL+  R T   L+E L++L KFG+ +C+ D+E LS++ PKVV
Sbjct: 217  LKKIVEAFAFLSILSAFLQLRTERMTSACLKEVLERLRKFGLGVCMEDIECLSVLCPKVV 276

Query: 3137 SFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCALKRRENSFKSDL 2958
             F NN +  ++  DALVI    T+  ++V  K  +   +M++++I   +K+ E+SFK+ L
Sbjct: 277  CFVNNDMEPKNFGDALVITLTSTKEGDKVDNKLGAGKSRMSLSKIFSIMKKWESSFKTSL 336

Query: 2957 WKAVEQLMFITGNEKAT-FSLEGLLLSLKDRVTAASSNNRRKAKGS-NGTSSSYSGPKRC 2784
            W+ ++ LM     E  T FSLE LL+  K+    +  N  ++A+ S +  S+S+S  +RC
Sbjct: 337  WETIKLLMSKQKYENLTSFSLEDLLIFWKEGDKVSERNETKRARRSWSSASNSHSVKRRC 396

Query: 2783 NATNELRPVEMVDHLRKGVG 2724
            + T++L P EMV+HLRK +G
Sbjct: 397  HDTSQLLPAEMVEHLRKSIG 416



 Score =  380 bits (976), Expect = e-102
 Identities = 185/291 (63%), Positives = 223/291 (76%), Gaps = 6/291 (2%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K+PS S+SIRAIE E+Y V+D Q NE LEEIEES+AFFQVYEGAVY+ QG+TYLV+ L+ 
Sbjct: 911  KMPSRSISIRAIEAERYVVIDTQLNETLEEIEESRAFFQVYEGAVYMHQGRTYLVKDLDL 970

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRVG------TAARADPCKVTTSWFG 725
            S KIA+C +A L YYT+ RD TDIH+I G IAYP R+       T A+A+ C VTT+WFG
Sbjct: 971  SRKIAYCEKAALDYYTKTRDYTDIHIIGGKIAYPARISKDQLPRTTAQANTCSVTTTWFG 1030

Query: 724  FHRVERGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVL 545
            F R+ +GSNQI++TVDL LP +SY SQAVW+ VPQS K  V      F AGLHAA HAVL
Sbjct: 1031 FRRIRKGSNQILDTVDLWLPRYSYESQAVWISVPQSIKTVVE-KKYSFCAGLHAACHAVL 1089

Query: 544  NVVPLRIICDSLDLAPECPNPHDTRYYPERILLYDQHPGGMGVSMQVQPFFMXXXXXXXX 365
            +VVPL I C+  DLAPECPNPHDTR++PERILLYDQHPGG GVS Q+QP+F         
Sbjct: 1090 HVVPLYIRCNLSDLAPECPNPHDTRFFPERILLYDQHPGGTGVSKQIQPYFTELLCSALE 1149

Query: 364  XLSFCCCSGNTGCPNCIQNFACHEYNEVLHKDAAIMIIKGVLDAEEQRSKG 212
             L+ C CS ++GCPNC+QN ACHEYNE+++KDAAIMIIKGVLDAE+   +G
Sbjct: 1150 LLTCCHCSSDSGCPNCVQNLACHEYNELINKDAAIMIIKGVLDAEKLYFEG 1200


>ref|XP_012488975.1| PREDICTED: putative ATP-dependent helicase hrq1 isoform X2 [Gossypium
            raimondii]
          Length = 1178

 Score =  756 bits (1952), Expect(2) = 0.0
 Identities = 380/502 (75%), Positives = 418/502 (83%), Gaps = 4/502 (0%)
 Frame = -1

Query: 2718 GKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGKNVVVAT 2539
            G++VHVE I ARK +Y EIP E+S    SALK  G++KLYSHQAESI ASL+GKNVVVAT
Sbjct: 428  GQMVHVEKIGARKGSYVEIPNELSDKSKSALKSIGINKLYSHQAESILASLSGKNVVVAT 487

Query: 2538 MTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSLNIGVYD 2359
            MTSSGKS+CYNLPVLE LS NL +CALYLFPTKALAQDQLRALL LT   D  +NIGVYD
Sbjct: 488  MTSSGKSVCYNLPVLEALSHNLSSCALYLFPTKALAQDQLRALLTLTNGFDCGINIGVYD 547

Query: 2358 GDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAYKGAFGC 2179
            GDT ++ER WLR+N RLLITNPDMLHM+ILP H+QF RILSNL FVV+DEAHAYKGAFGC
Sbjct: 548  GDTSQKERTWLRENARLLITNPDMLHMAILPLHRQFSRILSNLSFVVIDEAHAYKGAFGC 607

Query: 2178 HTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGSPSARKL 1999
            HTALILRRLRRLCSHVYGSDPSFVF TATS+NP EHC ELANL   ELIE DGSPS+ K+
Sbjct: 608  HTALILRRLRRLCSHVYGSDPSFVFCTATSSNPREHCMELANLSTLELIEKDGSPSSEKI 667

Query: 1998 FILWNPVLHQETVSNETNSTMCTTKSAEGI----AKVKKSSPILDVSRLFAEMVQHGLRC 1831
            F+LWNPVL   T  +         KS  GI    A  K  SPI +VS LFAEMVQHGLRC
Sbjct: 668  FVLWNPVLPLRTELD---------KSEFGIDGRNASDKSLSPISEVSHLFAEMVQHGLRC 718

Query: 1830 IAFCRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKLCGIA 1651
            IAFC+SRKLCELVLCYTREILEE APHL++SICAYRAGY++EDRR IE +FF GKLCGIA
Sbjct: 719  IAFCKSRKLCELVLCYTREILEEVAPHLVNSICAYRAGYVSEDRRRIESEFFGGKLCGIA 778

Query: 1650 ATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQHFMK 1471
            ATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGR+GRRE  SLAVYVAF+GPLDQ+FMK
Sbjct: 779  ATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRERSSLAVYVAFEGPLDQYFMK 838

Query: 1470 FPRKLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSLKNSG 1291
            FP+KLF  PIECCHIDAQN+QV+EQHLVCAA EHPLSLLYDEKYFG GLS AI +LKN G
Sbjct: 839  FPQKLFCGPIECCHIDAQNQQVLEQHLVCAALEHPLSLLYDEKYFGSGLSKAINALKNRG 898

Query: 1290 YLXXXXXXXXXSKLWNYIGHAV 1225
            YL         SK+W+Y+GH V
Sbjct: 899  YLTSNPSNDSLSKIWSYMGHEV 920



 Score =  288 bits (737), Expect(2) = 0.0
 Identities = 180/441 (40%), Positives = 265/441 (60%), Gaps = 10/441 (2%)
 Frame = -2

Query: 4013 EIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQRKVGTL 3834
            EI+VRT+SG+STT+ VS  +++ DLK LLK +F PA  SPNFHLF+KG KL LQ KV +L
Sbjct: 5    EIEVRTLSGESTTITVSPETTINDLKHLLKLSFAPATSSPNFHLFFKGTKLNLQCKVSSL 64

Query: 3833 DMGNSEFLVLVPFAKRDSNQTQNSSQPKASMKVPNQPSISKFAESAWSDMMHDLSYLSDD 3654
               + EF VL+PF K++  Q +N S         +  + S FA+S +SDMM + SYL D+
Sbjct: 65   AFQSGEFFVLIPFTKKNKPQVENPSFSN------DASAASSFADSTYSDMMQEFSYLRDN 118

Query: 3653 PVAKAPEFEIAGNLRNRRDASAGLANSWSSEAKR-KRGSIECDDLL----YDILW---AP 3498
               K  E    GN  N      G  + +S +++R + G+I+ D+      YD+LW     
Sbjct: 119  S-RKFSE----GN--NNNSNGHGDDDDYSFKSRRIQGGNIDKDERNEGHPYDLLWNVLRS 171

Query: 3497 KSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSCSQAFGIGLPTNDGSTCLCPTW 3318
               D+ +E  CEKF+E L  +NCLS  +SG CML     S+A  I   ++D ++CLCP W
Sbjct: 172  SDRDLFEEKNCEKFVEVLQSMNCLSSPYSGKCML----LSEA--IFRTSDDHASCLCPAW 225

Query: 3317 LKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRDLEHLSIISPKVV 3138
            L+ L++AFA L++  AFLQLQ  R T + L++ L  L KFGV +C+ D+EHLS+I PKVV
Sbjct: 226  LRGLVEAFALLSILWAFLQLQTERMTTSRLKQVLGHLEKFGVGICMEDIEHLSVICPKVV 285

Query: 3137 SFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCALKRRENSFKSDL 2958
             F NN +  ++  +ALVI    T+  ++   K  +     ++++I   +K+ E SFK+ L
Sbjct: 286  YFVNNDMEPKNFSNALVITHSSTKEADKFASKLGAGKTCRSLSKIFNLMKKWECSFKTSL 345

Query: 2957 WKAVEQLMFITGNEK-ATFSLEGLLLSLKDRVTAASSNNRRKA-KGSNGTSSSYSGPKRC 2784
            W+ ++ LM     E   +FSLE LLL +K        N  ++A + S+  S+S+S  +RC
Sbjct: 346  WETIKLLMSKKNYENLLSFSLEDLLLFVKKGDYVLERNEAKRARRSSSSASNSHSVKRRC 405

Query: 2783 NATNELRPVEMVDHLRKGVGS 2721
            + T++L P EMV+HLRK +GS
Sbjct: 406  HDTSQLLPSEMVEHLRKSIGS 426



 Score =  328 bits (840), Expect = 3e-86
 Identities = 162/286 (56%), Positives = 208/286 (72%), Gaps = 6/286 (2%)
 Frame = -3

Query: 1051 SVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEFSSKIA 872
            S +I A++   Y +     N+ L +I  S    +VYEGAVY+ QG+TYLV+ L+ S KIA
Sbjct: 888  SKAINALKNRGY-LTSNPSNDSLSKIW-SYMGHEVYEGAVYLHQGRTYLVKDLDLSRKIA 945

Query: 871  FCVEADLKYYTRPRDCTDIHVISGHIAYPTRVG------TAARADPCKVTTSWFGFHRVE 710
            +C +A + YYT+ RD TDIH++ G IAYP RV       T A+A+PC VTT+WFGF R+ 
Sbjct: 946  YCEKAVMDYYTKTRDYTDIHIVGGKIAYPARVSKDQLPKTTAQANPCSVTTTWFGFRRIR 1005

Query: 709  RGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVLNVVPL 530
            RGSNQ+++TVDL+LP +SY SQAVW+ VPQS K+ V      FRAGLHAA HAVL+VVPL
Sbjct: 1006 RGSNQVLDTVDLSLPRYSYESQAVWISVPQSLKIIVE-KKYSFRAGLHAACHAVLHVVPL 1064

Query: 529  RIICDSLDLAPECPNPHDTRYYPERILLYDQHPGGMGVSMQVQPFFMXXXXXXXXXLSFC 350
             + C+  DLAPECPNP+D+R++PERILLYDQHPGG GVS Q+QP+F          L+ C
Sbjct: 1065 YMRCNLSDLAPECPNPYDSRFFPERILLYDQHPGGTGVSKQIQPYFTELLHSALELLTCC 1124

Query: 349  CCSGNTGCPNCIQNFACHEYNEVLHKDAAIMIIKGVLDAEEQRSKG 212
             CS +TGCPNC+QN AC EYNE+++KDAAI+IIKGVLDAE+   +G
Sbjct: 1125 HCSSDTGCPNCVQNLACQEYNELINKDAAIIIIKGVLDAEKTYFEG 1170


>ref|XP_012488973.1| PREDICTED: putative ATP-dependent helicase hrq1 isoform X1 [Gossypium
            raimondii] gi|823183783|ref|XP_012488974.1| PREDICTED:
            putative ATP-dependent helicase hrq1 isoform X1
            [Gossypium raimondii]
          Length = 1217

 Score =  755 bits (1949), Expect(2) = 0.0
 Identities = 379/500 (75%), Positives = 417/500 (83%), Gaps = 4/500 (0%)
 Frame = -1

Query: 2718 GKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGKNVVVAT 2539
            G++VHVE I ARK +Y EIP E+S    SALK  G++KLYSHQAESI ASL+GKNVVVAT
Sbjct: 428  GQMVHVEKIGARKGSYVEIPNELSDKSKSALKSIGINKLYSHQAESILASLSGKNVVVAT 487

Query: 2538 MTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSLNIGVYD 2359
            MTSSGKS+CYNLPVLE LS NL +CALYLFPTKALAQDQLRALL LT   D  +NIGVYD
Sbjct: 488  MTSSGKSVCYNLPVLEALSHNLSSCALYLFPTKALAQDQLRALLTLTNGFDCGINIGVYD 547

Query: 2358 GDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAYKGAFGC 2179
            GDT ++ER WLR+N RLLITNPDMLHM+ILP H+QF RILSNL FVV+DEAHAYKGAFGC
Sbjct: 548  GDTSQKERTWLRENARLLITNPDMLHMAILPLHRQFSRILSNLSFVVIDEAHAYKGAFGC 607

Query: 2178 HTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGSPSARKL 1999
            HTALILRRLRRLCSHVYGSDPSFVF TATS+NP EHC ELANL   ELIE DGSPS+ K+
Sbjct: 608  HTALILRRLRRLCSHVYGSDPSFVFCTATSSNPREHCMELANLSTLELIEKDGSPSSEKI 667

Query: 1998 FILWNPVLHQETVSNETNSTMCTTKSAEGI----AKVKKSSPILDVSRLFAEMVQHGLRC 1831
            F+LWNPVL   T  +         KS  GI    A  K  SPI +VS LFAEMVQHGLRC
Sbjct: 668  FVLWNPVLPLRTELD---------KSEFGIDGRNASDKSLSPISEVSHLFAEMVQHGLRC 718

Query: 1830 IAFCRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKLCGIA 1651
            IAFC+SRKLCELVLCYTREILEE APHL++SICAYRAGY++EDRR IE +FF GKLCGIA
Sbjct: 719  IAFCKSRKLCELVLCYTREILEEVAPHLVNSICAYRAGYVSEDRRRIESEFFGGKLCGIA 778

Query: 1650 ATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQHFMK 1471
            ATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGR+GRRE  SLAVYVAF+GPLDQ+FMK
Sbjct: 779  ATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRERSSLAVYVAFEGPLDQYFMK 838

Query: 1470 FPRKLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSLKNSG 1291
            FP+KLF  PIECCHIDAQN+QV+EQHLVCAA EHPLSLLYDEKYFG GLS AI +LKN G
Sbjct: 839  FPQKLFCGPIECCHIDAQNQQVLEQHLVCAALEHPLSLLYDEKYFGSGLSKAINALKNRG 898

Query: 1290 YLXXXXXXXXXSKLWNYIGH 1231
            YL         SK+W+Y+GH
Sbjct: 899  YLTSNPSNDSLSKIWSYMGH 918



 Score =  288 bits (737), Expect(2) = 0.0
 Identities = 180/441 (40%), Positives = 265/441 (60%), Gaps = 10/441 (2%)
 Frame = -2

Query: 4013 EIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQRKVGTL 3834
            EI+VRT+SG+STT+ VS  +++ DLK LLK +F PA  SPNFHLF+KG KL LQ KV +L
Sbjct: 5    EIEVRTLSGESTTITVSPETTINDLKHLLKLSFAPATSSPNFHLFFKGTKLNLQCKVSSL 64

Query: 3833 DMGNSEFLVLVPFAKRDSNQTQNSSQPKASMKVPNQPSISKFAESAWSDMMHDLSYLSDD 3654
               + EF VL+PF K++  Q +N S         +  + S FA+S +SDMM + SYL D+
Sbjct: 65   AFQSGEFFVLIPFTKKNKPQVENPSFSN------DASAASSFADSTYSDMMQEFSYLRDN 118

Query: 3653 PVAKAPEFEIAGNLRNRRDASAGLANSWSSEAKR-KRGSIECDDLL----YDILW---AP 3498
               K  E    GN  N      G  + +S +++R + G+I+ D+      YD+LW     
Sbjct: 119  S-RKFSE----GN--NNNSNGHGDDDDYSFKSRRIQGGNIDKDERNEGHPYDLLWNVLRS 171

Query: 3497 KSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSCSQAFGIGLPTNDGSTCLCPTW 3318
               D+ +E  CEKF+E L  +NCLS  +SG CML     S+A  I   ++D ++CLCP W
Sbjct: 172  SDRDLFEEKNCEKFVEVLQSMNCLSSPYSGKCML----LSEA--IFRTSDDHASCLCPAW 225

Query: 3317 LKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRDLEHLSIISPKVV 3138
            L+ L++AFA L++  AFLQLQ  R T + L++ L  L KFGV +C+ D+EHLS+I PKVV
Sbjct: 226  LRGLVEAFALLSILWAFLQLQTERMTTSRLKQVLGHLEKFGVGICMEDIEHLSVICPKVV 285

Query: 3137 SFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCALKRRENSFKSDL 2958
             F NN +  ++  +ALVI    T+  ++   K  +     ++++I   +K+ E SFK+ L
Sbjct: 286  YFVNNDMEPKNFSNALVITHSSTKEADKFASKLGAGKTCRSLSKIFNLMKKWECSFKTSL 345

Query: 2957 WKAVEQLMFITGNEK-ATFSLEGLLLSLKDRVTAASSNNRRKA-KGSNGTSSSYSGPKRC 2784
            W+ ++ LM     E   +FSLE LLL +K        N  ++A + S+  S+S+S  +RC
Sbjct: 346  WETIKLLMSKKNYENLLSFSLEDLLLFVKKGDYVLERNEAKRARRSSSSASNSHSVKRRC 405

Query: 2783 NATNELRPVEMVDHLRKGVGS 2721
            + T++L P EMV+HLRK +GS
Sbjct: 406  HDTSQLLPSEMVEHLRKSIGS 426



 Score =  381 bits (979), Expect = e-102
 Identities = 183/291 (62%), Positives = 226/291 (77%), Gaps = 6/291 (2%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K PS S+SIRAIE E+Y V+DKQ NE LEEIEES+AFFQVYEGAVY+ QG+TYLV+ L+ 
Sbjct: 920  KRPSRSISIRAIEAERYIVIDKQLNETLEEIEESRAFFQVYEGAVYLHQGRTYLVKDLDL 979

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRVG------TAARADPCKVTTSWFG 725
            S KIA+C +A + YYT+ RD TDIH++ G IAYP RV       T A+A+PC VTT+WFG
Sbjct: 980  SRKIAYCEKAVMDYYTKTRDYTDIHIVGGKIAYPARVSKDQLPKTTAQANPCSVTTTWFG 1039

Query: 724  FHRVERGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVL 545
            F R+ RGSNQ+++TVDL+LP +SY SQAVW+ VPQS K+ V      FRAGLHAA HAVL
Sbjct: 1040 FRRIRRGSNQVLDTVDLSLPRYSYESQAVWISVPQSLKIIVE-KKYSFRAGLHAACHAVL 1098

Query: 544  NVVPLRIICDSLDLAPECPNPHDTRYYPERILLYDQHPGGMGVSMQVQPFFMXXXXXXXX 365
            +VVPL + C+  DLAPECPNP+D+R++PERILLYDQHPGG GVS Q+QP+F         
Sbjct: 1099 HVVPLYMRCNLSDLAPECPNPYDSRFFPERILLYDQHPGGTGVSKQIQPYFTELLHSALE 1158

Query: 364  XLSFCCCSGNTGCPNCIQNFACHEYNEVLHKDAAIMIIKGVLDAEEQRSKG 212
             L+ C CS +TGCPNC+QN AC EYNE+++KDAAI+IIKGVLDAE+   +G
Sbjct: 1159 LLTCCHCSSDTGCPNCVQNLACQEYNELINKDAAIIIIKGVLDAEKTYFEG 1209


>ref|XP_012488977.1| PREDICTED: putative ATP-dependent helicase hrq1 isoform X4 [Gossypium
            raimondii] gi|823183797|ref|XP_012488978.1| PREDICTED:
            putative ATP-dependent helicase hrq1 isoform X4
            [Gossypium raimondii]
          Length = 1103

 Score =  755 bits (1949), Expect(2) = 0.0
 Identities = 379/500 (75%), Positives = 417/500 (83%), Gaps = 4/500 (0%)
 Frame = -1

Query: 2718 GKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGKNVVVAT 2539
            G++VHVE I ARK +Y EIP E+S    SALK  G++KLYSHQAESI ASL+GKNVVVAT
Sbjct: 428  GQMVHVEKIGARKGSYVEIPNELSDKSKSALKSIGINKLYSHQAESILASLSGKNVVVAT 487

Query: 2538 MTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSLNIGVYD 2359
            MTSSGKS+CYNLPVLE LS NL +CALYLFPTKALAQDQLRALL LT   D  +NIGVYD
Sbjct: 488  MTSSGKSVCYNLPVLEALSHNLSSCALYLFPTKALAQDQLRALLTLTNGFDCGINIGVYD 547

Query: 2358 GDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAYKGAFGC 2179
            GDT ++ER WLR+N RLLITNPDMLHM+ILP H+QF RILSNL FVV+DEAHAYKGAFGC
Sbjct: 548  GDTSQKERTWLRENARLLITNPDMLHMAILPLHRQFSRILSNLSFVVIDEAHAYKGAFGC 607

Query: 2178 HTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGSPSARKL 1999
            HTALILRRLRRLCSHVYGSDPSFVF TATS+NP EHC ELANL   ELIE DGSPS+ K+
Sbjct: 608  HTALILRRLRRLCSHVYGSDPSFVFCTATSSNPREHCMELANLSTLELIEKDGSPSSEKI 667

Query: 1998 FILWNPVLHQETVSNETNSTMCTTKSAEGI----AKVKKSSPILDVSRLFAEMVQHGLRC 1831
            F+LWNPVL   T  +         KS  GI    A  K  SPI +VS LFAEMVQHGLRC
Sbjct: 668  FVLWNPVLPLRTELD---------KSEFGIDGRNASDKSLSPISEVSHLFAEMVQHGLRC 718

Query: 1830 IAFCRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKLCGIA 1651
            IAFC+SRKLCELVLCYTREILEE APHL++SICAYRAGY++EDRR IE +FF GKLCGIA
Sbjct: 719  IAFCKSRKLCELVLCYTREILEEVAPHLVNSICAYRAGYVSEDRRRIESEFFGGKLCGIA 778

Query: 1650 ATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQHFMK 1471
            ATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGR+GRRE  SLAVYVAF+GPLDQ+FMK
Sbjct: 779  ATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRERSSLAVYVAFEGPLDQYFMK 838

Query: 1470 FPRKLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSLKNSG 1291
            FP+KLF  PIECCHIDAQN+QV+EQHLVCAA EHPLSLLYDEKYFG GLS AI +LKN G
Sbjct: 839  FPQKLFCGPIECCHIDAQNQQVLEQHLVCAALEHPLSLLYDEKYFGSGLSKAINALKNRG 898

Query: 1290 YLXXXXXXXXXSKLWNYIGH 1231
            YL         SK+W+Y+GH
Sbjct: 899  YLTSNPSNDSLSKIWSYMGH 918



 Score =  288 bits (737), Expect(2) = 0.0
 Identities = 180/441 (40%), Positives = 265/441 (60%), Gaps = 10/441 (2%)
 Frame = -2

Query: 4013 EIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQRKVGTL 3834
            EI+VRT+SG+STT+ VS  +++ DLK LLK +F PA  SPNFHLF+KG KL LQ KV +L
Sbjct: 5    EIEVRTLSGESTTITVSPETTINDLKHLLKLSFAPATSSPNFHLFFKGTKLNLQCKVSSL 64

Query: 3833 DMGNSEFLVLVPFAKRDSNQTQNSSQPKASMKVPNQPSISKFAESAWSDMMHDLSYLSDD 3654
               + EF VL+PF K++  Q +N S         +  + S FA+S +SDMM + SYL D+
Sbjct: 65   AFQSGEFFVLIPFTKKNKPQVENPSFSN------DASAASSFADSTYSDMMQEFSYLRDN 118

Query: 3653 PVAKAPEFEIAGNLRNRRDASAGLANSWSSEAKR-KRGSIECDDLL----YDILW---AP 3498
               K  E    GN  N      G  + +S +++R + G+I+ D+      YD+LW     
Sbjct: 119  S-RKFSE----GN--NNNSNGHGDDDDYSFKSRRIQGGNIDKDERNEGHPYDLLWNVLRS 171

Query: 3497 KSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSCSQAFGIGLPTNDGSTCLCPTW 3318
               D+ +E  CEKF+E L  +NCLS  +SG CML     S+A  I   ++D ++CLCP W
Sbjct: 172  SDRDLFEEKNCEKFVEVLQSMNCLSSPYSGKCML----LSEA--IFRTSDDHASCLCPAW 225

Query: 3317 LKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRDLEHLSIISPKVV 3138
            L+ L++AFA L++  AFLQLQ  R T + L++ L  L KFGV +C+ D+EHLS+I PKVV
Sbjct: 226  LRGLVEAFALLSILWAFLQLQTERMTTSRLKQVLGHLEKFGVGICMEDIEHLSVICPKVV 285

Query: 3137 SFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCALKRRENSFKSDL 2958
             F NN +  ++  +ALVI    T+  ++   K  +     ++++I   +K+ E SFK+ L
Sbjct: 286  YFVNNDMEPKNFSNALVITHSSTKEADKFASKLGAGKTCRSLSKIFNLMKKWECSFKTSL 345

Query: 2957 WKAVEQLMFITGNEK-ATFSLEGLLLSLKDRVTAASSNNRRKA-KGSNGTSSSYSGPKRC 2784
            W+ ++ LM     E   +FSLE LLL +K        N  ++A + S+  S+S+S  +RC
Sbjct: 346  WETIKLLMSKKNYENLLSFSLEDLLLFVKKGDYVLERNEAKRARRSSSSASNSHSVKRRC 405

Query: 2783 NATNELRPVEMVDHLRKGVGS 2721
            + T++L P EMV+HLRK +GS
Sbjct: 406  HDTSQLLPSEMVEHLRKSIGS 426



 Score =  241 bits (614), Expect = 5e-60
 Identities = 118/185 (63%), Positives = 144/185 (77%), Gaps = 6/185 (3%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K PS S+SIRAIE E+Y V+DKQ NE LEEIEES+AFFQVYEGAVY+ QG+TYLV+ L+ 
Sbjct: 920  KRPSRSISIRAIEAERYIVIDKQLNETLEEIEESRAFFQVYEGAVYLHQGRTYLVKDLDL 979

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRVG------TAARADPCKVTTSWFG 725
            S KIA+C +A + YYT+ RD TDIH++ G IAYP RV       T A+A+PC VTT+WFG
Sbjct: 980  SRKIAYCEKAVMDYYTKTRDYTDIHIVGGKIAYPARVSKDQLPKTTAQANPCSVTTTWFG 1039

Query: 724  FHRVERGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVL 545
            F R+ RGSNQ+++TVDL+LP +SY SQAVW+ VPQS K+ V      FRAGLHAA HAVL
Sbjct: 1040 FRRIRRGSNQVLDTVDLSLPRYSYESQAVWISVPQSLKIIVE-KKYSFRAGLHAACHAVL 1098

Query: 544  NVVPL 530
            +VVPL
Sbjct: 1099 HVVPL 1103


>ref|XP_012488979.1| PREDICTED: putative ATP-dependent helicase hrq1 isoform X5 [Gossypium
            raimondii]
          Length = 1038

 Score =  755 bits (1949), Expect(2) = 0.0
 Identities = 379/500 (75%), Positives = 417/500 (83%), Gaps = 4/500 (0%)
 Frame = -1

Query: 2718 GKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGKNVVVAT 2539
            G++VHVE I ARK +Y EIP E+S    SALK  G++KLYSHQAESI ASL+GKNVVVAT
Sbjct: 428  GQMVHVEKIGARKGSYVEIPNELSDKSKSALKSIGINKLYSHQAESILASLSGKNVVVAT 487

Query: 2538 MTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSLNIGVYD 2359
            MTSSGKS+CYNLPVLE LS NL +CALYLFPTKALAQDQLRALL LT   D  +NIGVYD
Sbjct: 488  MTSSGKSVCYNLPVLEALSHNLSSCALYLFPTKALAQDQLRALLTLTNGFDCGINIGVYD 547

Query: 2358 GDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAYKGAFGC 2179
            GDT ++ER WLR+N RLLITNPDMLHM+ILP H+QF RILSNL FVV+DEAHAYKGAFGC
Sbjct: 548  GDTSQKERTWLRENARLLITNPDMLHMAILPLHRQFSRILSNLSFVVIDEAHAYKGAFGC 607

Query: 2178 HTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGSPSARKL 1999
            HTALILRRLRRLCSHVYGSDPSFVF TATS+NP EHC ELANL   ELIE DGSPS+ K+
Sbjct: 608  HTALILRRLRRLCSHVYGSDPSFVFCTATSSNPREHCMELANLSTLELIEKDGSPSSEKI 667

Query: 1998 FILWNPVLHQETVSNETNSTMCTTKSAEGI----AKVKKSSPILDVSRLFAEMVQHGLRC 1831
            F+LWNPVL   T  +         KS  GI    A  K  SPI +VS LFAEMVQHGLRC
Sbjct: 668  FVLWNPVLPLRTELD---------KSEFGIDGRNASDKSLSPISEVSHLFAEMVQHGLRC 718

Query: 1830 IAFCRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKLCGIA 1651
            IAFC+SRKLCELVLCYTREILEE APHL++SICAYRAGY++EDRR IE +FF GKLCGIA
Sbjct: 719  IAFCKSRKLCELVLCYTREILEEVAPHLVNSICAYRAGYVSEDRRRIESEFFGGKLCGIA 778

Query: 1650 ATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQHFMK 1471
            ATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGR+GRRE  SLAVYVAF+GPLDQ+FMK
Sbjct: 779  ATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRERSSLAVYVAFEGPLDQYFMK 838

Query: 1470 FPRKLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSLKNSG 1291
            FP+KLF  PIECCHIDAQN+QV+EQHLVCAA EHPLSLLYDEKYFG GLS AI +LKN G
Sbjct: 839  FPQKLFCGPIECCHIDAQNQQVLEQHLVCAALEHPLSLLYDEKYFGSGLSKAINALKNRG 898

Query: 1290 YLXXXXXXXXXSKLWNYIGH 1231
            YL         SK+W+Y+GH
Sbjct: 899  YLTSNPSNDSLSKIWSYMGH 918



 Score =  288 bits (737), Expect(2) = 0.0
 Identities = 180/441 (40%), Positives = 265/441 (60%), Gaps = 10/441 (2%)
 Frame = -2

Query: 4013 EIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQRKVGTL 3834
            EI+VRT+SG+STT+ VS  +++ DLK LLK +F PA  SPNFHLF+KG KL LQ KV +L
Sbjct: 5    EIEVRTLSGESTTITVSPETTINDLKHLLKLSFAPATSSPNFHLFFKGTKLNLQCKVSSL 64

Query: 3833 DMGNSEFLVLVPFAKRDSNQTQNSSQPKASMKVPNQPSISKFAESAWSDMMHDLSYLSDD 3654
               + EF VL+PF K++  Q +N S         +  + S FA+S +SDMM + SYL D+
Sbjct: 65   AFQSGEFFVLIPFTKKNKPQVENPSFSN------DASAASSFADSTYSDMMQEFSYLRDN 118

Query: 3653 PVAKAPEFEIAGNLRNRRDASAGLANSWSSEAKR-KRGSIECDDLL----YDILW---AP 3498
               K  E    GN  N      G  + +S +++R + G+I+ D+      YD+LW     
Sbjct: 119  S-RKFSE----GN--NNNSNGHGDDDDYSFKSRRIQGGNIDKDERNEGHPYDLLWNVLRS 171

Query: 3497 KSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSCSQAFGIGLPTNDGSTCLCPTW 3318
               D+ +E  CEKF+E L  +NCLS  +SG CML     S+A  I   ++D ++CLCP W
Sbjct: 172  SDRDLFEEKNCEKFVEVLQSMNCLSSPYSGKCML----LSEA--IFRTSDDHASCLCPAW 225

Query: 3317 LKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRDLEHLSIISPKVV 3138
            L+ L++AFA L++  AFLQLQ  R T + L++ L  L KFGV +C+ D+EHLS+I PKVV
Sbjct: 226  LRGLVEAFALLSILWAFLQLQTERMTTSRLKQVLGHLEKFGVGICMEDIEHLSVICPKVV 285

Query: 3137 SFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCALKRRENSFKSDL 2958
             F NN +  ++  +ALVI    T+  ++   K  +     ++++I   +K+ E SFK+ L
Sbjct: 286  YFVNNDMEPKNFSNALVITHSSTKEADKFASKLGAGKTCRSLSKIFNLMKKWECSFKTSL 345

Query: 2957 WKAVEQLMFITGNEK-ATFSLEGLLLSLKDRVTAASSNNRRKA-KGSNGTSSSYSGPKRC 2784
            W+ ++ LM     E   +FSLE LLL +K        N  ++A + S+  S+S+S  +RC
Sbjct: 346  WETIKLLMSKKNYENLLSFSLEDLLLFVKKGDYVLERNEAKRARRSSSSASNSHSVKRRC 405

Query: 2783 NATNELRPVEMVDHLRKGVGS 2721
            + T++L P EMV+HLRK +GS
Sbjct: 406  HDTSQLLPSEMVEHLRKSIGS 426



 Score =  127 bits (319), Expect = 9e-26
 Identities = 60/91 (65%), Positives = 74/91 (81%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K PS S+SIRAIE E+Y V+DKQ NE LEEIEES+AFFQVYEGAVY+ QG+TYLV+ L+ 
Sbjct: 920  KRPSRSISIRAIEAERYIVIDKQLNETLEEIEESRAFFQVYEGAVYLHQGRTYLVKDLDL 979

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHI 794
            S KIA+C +A + YYT+ RD TDIH++ G I
Sbjct: 980  SRKIAYCEKAVMDYYTKTRDYTDIHIVGGKI 1010


>ref|XP_012080429.1| PREDICTED: putative ATP-dependent helicase hrq1 [Jatropha curcas]
          Length = 1212

 Score =  749 bits (1935), Expect(2) = 0.0
 Identities = 372/501 (74%), Positives = 422/501 (84%)
 Frame = -1

Query: 2736 EGSWIKGKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGK 2557
            EG+   G+IVHVEDI AR A   EIP E+S N+ S+LK  G++KLYSHQAESI ASLAGK
Sbjct: 415  EGTGANGQIVHVEDIGARNAICVEIPHELSDNIKSSLKCMGITKLYSHQAESIMASLAGK 474

Query: 2556 NVVVATMTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSL 2377
            NVVV+TMTSSGKSLCYN+PVLE+LSQNL +CALYLFPTKALAQDQLRALL +T   D ++
Sbjct: 475  NVVVSTMTSSGKSLCYNIPVLEVLSQNLDSCALYLFPTKALAQDQLRALLAMTNRFDTAI 534

Query: 2376 NIGVYDGDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAY 2197
            NIG+YDGDT + ER  LR N RLLITNPDMLHM+ILP H+QF RILSNLRFVV+DEAHAY
Sbjct: 535  NIGIYDGDTSQRERPELRANTRLLITNPDMLHMTILPFHRQFSRILSNLRFVVIDEAHAY 594

Query: 2196 KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGS 2017
            +GAFGCHTALILRRLRR+CSHVYGSDPSF+FSTATSANP EHC ELANL   ELI NDGS
Sbjct: 595  RGAFGCHTALILRRLRRICSHVYGSDPSFIFSTATSANPREHCMELANLSTLELINNDGS 654

Query: 2016 PSARKLFILWNPVLHQETVSNETNSTMCTTKSAEGIAKVKKSSPILDVSRLFAEMVQHGL 1837
            PS++KLF LWNP+ +  T SN+ +S          +   KKSSPI +VS LFAEMVQHGL
Sbjct: 655  PSSQKLFALWNPLSYPGTASNKDDS----------LTANKKSSPISEVSYLFAEMVQHGL 704

Query: 1836 RCIAFCRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKLCG 1657
            RCIAFC SRKL ELVL YTREIL++TAPHL+D ICAYRAGY AEDRR IE DFFSGKLCG
Sbjct: 705  RCIAFCNSRKLIELVLSYTREILQKTAPHLVDLICAYRAGYTAEDRRKIESDFFSGKLCG 764

Query: 1656 IAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQHF 1477
            +AATNALELGIDVGHID TLHLGFPGSIASLWQQAGR+GRRE PSLAVYVAF+GPLDQ+F
Sbjct: 765  VAATNALELGIDVGHIDATLHLGFPGSIASLWQQAGRSGRREKPSLAVYVAFEGPLDQYF 824

Query: 1476 MKFPRKLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSLKN 1297
            MKFP+KLF SPIEC HIDAQN+QV+EQ LVCAA+EHPLS++YDEK+FG GLS +IM+LKN
Sbjct: 825  MKFPKKLFSSPIECNHIDAQNQQVLEQQLVCAAFEHPLSVIYDEKHFGAGLSYSIMTLKN 884

Query: 1296 SGYLXXXXXXXXXSKLWNYIG 1234
             GYL         +++W+YIG
Sbjct: 885  MGYLSSDLSHDSSARIWSYIG 905



 Score =  293 bits (750), Expect(2) = 0.0
 Identities = 178/448 (39%), Positives = 259/448 (57%), Gaps = 11/448 (2%)
 Frame = -2

Query: 4031 MATSDIEIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQ 3852
            MA  + EI+VRT++G+STT+++  N ++ DLKLLL  TFPPA  SPNFHLF+KGVKL LQ
Sbjct: 1    MAEEEREIEVRTLTGESTTVFIGPNKTISDLKLLLTLTFPPASSSPNFHLFFKGVKLGLQ 60

Query: 3851 RKVGTLDMGNSEFLVLVPFAKRDSNQTQNSSQPKASMKVPNQPSISKFAESAWSDMMHDL 3672
             ++ + + G  E LVLVPF K+D  QT +S     S  +P Q   S +A+S +SDMM + 
Sbjct: 61   SRISSTEPG--ELLVLVPFIKKDKPQTPSSD---FSTNLPKQSLNSAYADSVYSDMMQEF 115

Query: 3671 SYLSDDPVAKAPEFEIAGNLRNRRDASAGLANSWSSEAKRKRGSIECDDLL-----YDIL 3507
            S   D                      +   N+  S  KRKR     +D       Y  L
Sbjct: 116  SSFLDQ---------------------SNDTNASYSGCKRKRVFENYNDKHEEEGPYAFL 154

Query: 3506 WAP---KSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNC-MLSIRSCSQAFGIGLPTNDGS 3339
            W+     + +++D+    KF+E L  +NCL   H G C +L  R+ S +   GL +++  
Sbjct: 155  WSTLQSSNKNIIDDQNSRKFVEVLESLNCLRSPHFGTCILLGNRANSDS---GLYSDNKV 211

Query: 3338 TCLCPTWLKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRDLEHLS 3159
            +C CP WLK ++KAFAFLN+FSAFLQ+Q+   T   L++AL QL KFG      D+EH++
Sbjct: 212  SCFCPAWLKRIMKAFAFLNIFSAFLQMQKEEITSTRLKDALKQLSKFGFGADFEDIEHIA 271

Query: 3158 IISPKVVSFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCALKRRE 2979
            I+  KVVSF +N     +  DAL+II   +E ++++  + ++  + M++++I   +++RE
Sbjct: 272  ILCSKVVSFTSNETNPGNSADALIIINSESEERKEILTRSRNDQKAMSLSKIFTVIRKRE 331

Query: 2978 NSFKSDLWKAVEQLMFITGNE-KATFSLEGLLLSLKDRVTAASSNNRRKAKGSNGTS-SS 2805
            NSFK+DLW A   LM  +GN     FSLE LL  +K+    A  N  +K KGS   +  S
Sbjct: 332  NSFKTDLWTAARLLMGKSGNAITMHFSLEDLLKFVKEGGVPARGNKAKKEKGSQFIAPRS 391

Query: 2804 YSGPKRCNATNELRPVEMVDHLRKGVGS 2721
            YS   RC+ TN+L P EM+ HLR+G G+
Sbjct: 392  YSFRTRCSDTNKLLPAEMLQHLREGTGA 419



 Score =  378 bits (970), Expect = e-101
 Identities = 183/290 (63%), Positives = 220/290 (75%), Gaps = 6/290 (2%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K+PSH +SIRAIET +YRVVD+  NE+LEEIEESKAFFQVYEGAVY+ QGKTYLVE L  
Sbjct: 908  KIPSHGISIRAIETVRYRVVDRNGNEVLEEIEESKAFFQVYEGAVYMHQGKTYLVEVLNV 967

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRVG------TAARADPCKVTTSWFG 725
            S K A C  ADLKYYT+ RD TD+HV  G IAYP RV       T A+A  CKVTT+WFG
Sbjct: 968  SEKFALCRRADLKYYTKTRDYTDVHVCGGDIAYPARVSKNQSLKTTAQASHCKVTTTWFG 1027

Query: 724  FHRVERGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVL 545
            F+ ++RG+N +++  DL+LP +SY SQAVW+ VPQS K  V + +  FR GLHAASHA+L
Sbjct: 1028 FYCIQRGTNNVLDKFDLSLPKYSYDSQAVWIQVPQSVKNTV-LKDFPFREGLHAASHALL 1086

Query: 544  NVVPLRIICDSLDLAPECPNPHDTRYYPERILLYDQHPGGMGVSMQVQPFFMXXXXXXXX 365
             +VPL I C+S DLAPECPNPHDTRY PERIL+YDQHPGG GV+ Q+QP+F         
Sbjct: 1087 KLVPLYIRCNSSDLAPECPNPHDTRYCPERILIYDQHPGGTGVTKQIQPYFTELLNAALE 1146

Query: 364  XLSFCCCSGNTGCPNCIQNFACHEYNEVLHKDAAIMIIKGVLDAEEQRSK 215
             L+ C CSG TGCP+C+Q+ ACHE+NE +HK AAI+IIKGVLDAE+   K
Sbjct: 1147 LLTSCHCSGVTGCPSCVQSLACHEFNEEIHKGAAIVIIKGVLDAEKDYFK 1196


>ref|XP_008453310.1| PREDICTED: putative ATP-dependent helicase hrq1 isoform X1 [Cucumis
            melo]
          Length = 1229

 Score =  747 bits (1929), Expect(2) = 0.0
 Identities = 362/496 (72%), Positives = 419/496 (84%)
 Frame = -1

Query: 2721 KGKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGKNVVVA 2542
            +G+IVHV DI ARKANY EIPKE+S +++SALK  GV+KLYSHQA SI+ASL+GK+V VA
Sbjct: 446  EGQIVHVNDILARKANYVEIPKELSNSVVSALKCIGVAKLYSHQARSIEASLSGKHVAVA 505

Query: 2541 TMTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSLNIGVY 2362
            TMTSSGKSLCYNLPVLE +SQ++ +CALYLFPTKALAQDQLR+LLV+ K    +LNIGVY
Sbjct: 506  TMTSSGKSLCYNLPVLEAMSQDVSSCALYLFPTKALAQDQLRSLLVMMKGFIHNLNIGVY 565

Query: 2361 DGDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAYKGAFG 2182
            DGDT + +R  LRDN RLLITNPDMLH+SILPHH+QF RILSNLRF+V+DEAH YKGAFG
Sbjct: 566  DGDTSQADRILLRDNARLLITNPDMLHVSILPHHRQFSRILSNLRFIVIDEAHTYKGAFG 625

Query: 2181 CHTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGSPSARK 2002
            CHTALILRRLRR+CSHVYGSDPSF+F TATSANP EHC EL NL   ELI+NDGSPSARK
Sbjct: 626  CHTALILRRLRRICSHVYGSDPSFIFCTATSANPREHCMELGNLSSLELIDNDGSPSARK 685

Query: 2001 LFILWNPVLHQETVSNETNSTMCTTKSAEGIAKVKKSSPILDVSRLFAEMVQHGLRCIAF 1822
            LF+LWNPV+  ++     +S+  T K+       K  SPI+D++RLFAEMVQHGLRCIAF
Sbjct: 686  LFLLWNPVMALKSYQRGIDSSQSTKKN----ISFKNPSPIMDIARLFAEMVQHGLRCIAF 741

Query: 1821 CRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKLCGIAATN 1642
            C++RKLCELVLCYTREIL+E+APHL+ S+CAYRAGY AEDRR IE DFF G LCG+AATN
Sbjct: 742  CKTRKLCELVLCYTREILKESAPHLVQSVCAYRAGYTAEDRRRIESDFFGGNLCGVAATN 801

Query: 1641 ALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQHFMKFPR 1462
            ALELGIDVGHID TLHLGFPGSIASLWQQAGRAGRRE  SL+VYVAF+GPLDQ+FMK P 
Sbjct: 802  ALELGIDVGHIDATLHLGFPGSIASLWQQAGRAGRREKTSLSVYVAFEGPLDQYFMKHPE 861

Query: 1461 KLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSLKNSGYLX 1282
            KLFGSPIECCHIDA+N+QV+EQHL+CAAYEHP+ + YD+ +FG GL+ A+MSLKN G L 
Sbjct: 862  KLFGSPIECCHIDAENQQVLEQHLLCAAYEHPVCVAYDQIFFGPGLNNALMSLKNRGDLI 921

Query: 1281 XXXXXXXXSKLWNYIG 1234
                      +WNYIG
Sbjct: 922  PEPSCGSSKSIWNYIG 937



 Score =  295 bits (754), Expect(2) = 0.0
 Identities = 185/453 (40%), Positives = 271/453 (59%), Gaps = 17/453 (3%)
 Frame = -2

Query: 4031 MATSDIEIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQ 3852
            M  S+ EI+++T++G+S T+ VS NS+++DLKLLL++ FP A  SPNFHLF+KG KLK Q
Sbjct: 1    MEESEREIRIKTLTGESMTVSVSGNSTIDDLKLLLRRNFPSATISPNFHLFFKGTKLKPQ 60

Query: 3851 RKVGTLDMGNSEFLVLVPFAKRDSNQTQNSSQPKASMKVPNQPSISKFAESAWSDMMHDL 3672
             ++    + + EFLVL+PF K++S++++   Q +    V +  SIS+FA+SAWSDM+ DL
Sbjct: 61   SQISACCIDHGEFLVLIPFNKKESSKSRLRDQYELEFSVSSGTSISQFADSAWSDMVQDL 120

Query: 3671 SYLSDDPV----AKAPEFEIAGNLRNRRDASAGLANSWSSEAKRKRGSI---------EC 3531
            SYL    V        E E A +     DA      S SS + + +G +           
Sbjct: 121  SYLHGCSVEGREETVSESERASSEVGEVDAELEACCSTSSLSSKAKGKLGFGNDGLNGSL 180

Query: 3530 DDLLYDILWAPKSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSCSQAFGIGLPT 3351
            DD+L +  ++P +   L+E  CE FI+FL  V+CL+D  +GNCML+ ++ S++     P 
Sbjct: 181  DDVLRNFSFSP-TEGFLNEQTCESFIKFLESVDCLTDPRNGNCMLAKQANSRSGNKRAPN 239

Query: 3350 ND-GSTCLCPTWLKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRD 3174
            +  GS+CLCPTWLK ++KAF+FLNVFS FLQLQ+   T++ LE+A+DQL K  +  C+ D
Sbjct: 240  STRGSSCLCPTWLKKIMKAFSFLNVFSMFLQLQEEIMTVSRLEQAMDQLQKRRIMFCMED 299

Query: 3173 LEHLSIISPKVVSFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCA 2994
            + +LS + PK V FA + I+E + V  L+II   TE   + K   K +     V+  V  
Sbjct: 300  IHNLSRLCPKAVHFA-SGIMEDTRVHKLIIIIYLTEKNGRPK---KDIDN--TVSMDVTP 353

Query: 2993 LKRRENSFKSDLWKAVEQLMFITGNEK---ATFSLEGLLLSLKDRVTAASSNNRRKAKGS 2823
            LKRRE SFK  LW+A++  M   G+ +     FSLE L+ S  +      S  +R  K  
Sbjct: 354  LKRRERSFKFYLWEAIKCHMLKHGSGREMCVPFSLEALITS--NETDVDGSETKRAKKSD 411

Query: 2822 NGTSSSYSGPKRCNATNELRPVEMVDHLRKGVG 2724
              +SSS S   RC+ T++L P  MV+HL+K VG
Sbjct: 412  TASSSSQSERIRCHDTSKLLPENMVEHLKKSVG 444



 Score =  415 bits (1066), Expect = e-112
 Identities = 196/286 (68%), Positives = 236/286 (82%), Gaps = 6/286 (2%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K+PS SVSIRAIE E+Y+VVD++RNE+LEEIEESKAFFQVYEGAVY+ QG+TYLV+SL  
Sbjct: 940  KMPSRSVSIRAIEAERYKVVDQRRNEVLEEIEESKAFFQVYEGAVYMHQGRTYLVKSLNL 999

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRVG------TAARADPCKVTTSWFG 725
            S+ +AFC EADLKYYT+ RD TDIHVI G++AYP R        T A+A+ C+VTT+WFG
Sbjct: 1000 STMLAFCEEADLKYYTKTRDYTDIHVIGGNLAYPKRAPNIPPPKTTAQANDCRVTTTWFG 1059

Query: 724  FHRVERGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVL 545
            F+R+++GSNQI+++VDL+LP +SY SQAVW+PVPQS K  V   N DFRAGLHAASHA+L
Sbjct: 1060 FYRIQKGSNQILDSVDLSLPKYSYNSQAVWIPVPQSIKEEVKRKNFDFRAGLHAASHALL 1119

Query: 544  NVVPLRIICDSLDLAPECPNPHDTRYYPERILLYDQHPGGMGVSMQVQPFFMXXXXXXXX 365
            NVVPLRIIC+  DLAPEC NPHDTRY+PERILLYDQHPGG G+S+Q+QP F+        
Sbjct: 1120 NVVPLRIICNMSDLAPECANPHDTRYFPERILLYDQHPGGTGMSLQIQPVFIELLNAAFE 1179

Query: 364  XLSFCCCSGNTGCPNCIQNFACHEYNEVLHKDAAIMIIKGVLDAEE 227
             L+ C C G TGCPNC+Q+ ACHEYNEVLHKDAA +IIKGVLDAE+
Sbjct: 1180 LLTSCRCLGETGCPNCVQSLACHEYNEVLHKDAASLIIKGVLDAEK 1225


>ref|XP_008453311.1| PREDICTED: putative ATP-dependent helicase hrq1 isoform X2 [Cucumis
            melo]
          Length = 1129

 Score =  747 bits (1929), Expect(2) = 0.0
 Identities = 362/496 (72%), Positives = 419/496 (84%)
 Frame = -1

Query: 2721 KGKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGKNVVVA 2542
            +G+IVHV DI ARKANY EIPKE+S +++SALK  GV+KLYSHQA SI+ASL+GK+V VA
Sbjct: 446  EGQIVHVNDILARKANYVEIPKELSNSVVSALKCIGVAKLYSHQARSIEASLSGKHVAVA 505

Query: 2541 TMTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSLNIGVY 2362
            TMTSSGKSLCYNLPVLE +SQ++ +CALYLFPTKALAQDQLR+LLV+ K    +LNIGVY
Sbjct: 506  TMTSSGKSLCYNLPVLEAMSQDVSSCALYLFPTKALAQDQLRSLLVMMKGFIHNLNIGVY 565

Query: 2361 DGDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAYKGAFG 2182
            DGDT + +R  LRDN RLLITNPDMLH+SILPHH+QF RILSNLRF+V+DEAH YKGAFG
Sbjct: 566  DGDTSQADRILLRDNARLLITNPDMLHVSILPHHRQFSRILSNLRFIVIDEAHTYKGAFG 625

Query: 2181 CHTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGSPSARK 2002
            CHTALILRRLRR+CSHVYGSDPSF+F TATSANP EHC EL NL   ELI+NDGSPSARK
Sbjct: 626  CHTALILRRLRRICSHVYGSDPSFIFCTATSANPREHCMELGNLSSLELIDNDGSPSARK 685

Query: 2001 LFILWNPVLHQETVSNETNSTMCTTKSAEGIAKVKKSSPILDVSRLFAEMVQHGLRCIAF 1822
            LF+LWNPV+  ++     +S+  T K+       K  SPI+D++RLFAEMVQHGLRCIAF
Sbjct: 686  LFLLWNPVMALKSYQRGIDSSQSTKKN----ISFKNPSPIMDIARLFAEMVQHGLRCIAF 741

Query: 1821 CRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKLCGIAATN 1642
            C++RKLCELVLCYTREIL+E+APHL+ S+CAYRAGY AEDRR IE DFF G LCG+AATN
Sbjct: 742  CKTRKLCELVLCYTREILKESAPHLVQSVCAYRAGYTAEDRRRIESDFFGGNLCGVAATN 801

Query: 1641 ALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQHFMKFPR 1462
            ALELGIDVGHID TLHLGFPGSIASLWQQAGRAGRRE  SL+VYVAF+GPLDQ+FMK P 
Sbjct: 802  ALELGIDVGHIDATLHLGFPGSIASLWQQAGRAGRREKTSLSVYVAFEGPLDQYFMKHPE 861

Query: 1461 KLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSLKNSGYLX 1282
            KLFGSPIECCHIDA+N+QV+EQHL+CAAYEHP+ + YD+ +FG GL+ A+MSLKN G L 
Sbjct: 862  KLFGSPIECCHIDAENQQVLEQHLLCAAYEHPVCVAYDQIFFGPGLNNALMSLKNRGDLI 921

Query: 1281 XXXXXXXXSKLWNYIG 1234
                      +WNYIG
Sbjct: 922  PEPSCGSSKSIWNYIG 937



 Score =  295 bits (754), Expect(2) = 0.0
 Identities = 185/453 (40%), Positives = 271/453 (59%), Gaps = 17/453 (3%)
 Frame = -2

Query: 4031 MATSDIEIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQ 3852
            M  S+ EI+++T++G+S T+ VS NS+++DLKLLL++ FP A  SPNFHLF+KG KLK Q
Sbjct: 1    MEESEREIRIKTLTGESMTVSVSGNSTIDDLKLLLRRNFPSATISPNFHLFFKGTKLKPQ 60

Query: 3851 RKVGTLDMGNSEFLVLVPFAKRDSNQTQNSSQPKASMKVPNQPSISKFAESAWSDMMHDL 3672
             ++    + + EFLVL+PF K++S++++   Q +    V +  SIS+FA+SAWSDM+ DL
Sbjct: 61   SQISACCIDHGEFLVLIPFNKKESSKSRLRDQYELEFSVSSGTSISQFADSAWSDMVQDL 120

Query: 3671 SYLSDDPV----AKAPEFEIAGNLRNRRDASAGLANSWSSEAKRKRGSI---------EC 3531
            SYL    V        E E A +     DA      S SS + + +G +           
Sbjct: 121  SYLHGCSVEGREETVSESERASSEVGEVDAELEACCSTSSLSSKAKGKLGFGNDGLNGSL 180

Query: 3530 DDLLYDILWAPKSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSCSQAFGIGLPT 3351
            DD+L +  ++P +   L+E  CE FI+FL  V+CL+D  +GNCML+ ++ S++     P 
Sbjct: 181  DDVLRNFSFSP-TEGFLNEQTCESFIKFLESVDCLTDPRNGNCMLAKQANSRSGNKRAPN 239

Query: 3350 ND-GSTCLCPTWLKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRD 3174
            +  GS+CLCPTWLK ++KAF+FLNVFS FLQLQ+   T++ LE+A+DQL K  +  C+ D
Sbjct: 240  STRGSSCLCPTWLKKIMKAFSFLNVFSMFLQLQEEIMTVSRLEQAMDQLQKRRIMFCMED 299

Query: 3173 LEHLSIISPKVVSFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCA 2994
            + +LS + PK V FA + I+E + V  L+II   TE   + K   K +     V+  V  
Sbjct: 300  IHNLSRLCPKAVHFA-SGIMEDTRVHKLIIIIYLTEKNGRPK---KDIDN--TVSMDVTP 353

Query: 2993 LKRRENSFKSDLWKAVEQLMFITGNEK---ATFSLEGLLLSLKDRVTAASSNNRRKAKGS 2823
            LKRRE SFK  LW+A++  M   G+ +     FSLE L+ S  +      S  +R  K  
Sbjct: 354  LKRRERSFKFYLWEAIKCHMLKHGSGREMCVPFSLEALITS--NETDVDGSETKRAKKSD 411

Query: 2822 NGTSSSYSGPKRCNATNELRPVEMVDHLRKGVG 2724
              +SSS S   RC+ T++L P  MV+HL+K VG
Sbjct: 412  TASSSSQSERIRCHDTSKLLPENMVEHLKKSVG 444



 Score =  264 bits (674), Expect = 6e-67
 Identities = 126/186 (67%), Positives = 156/186 (83%), Gaps = 6/186 (3%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K+PS SVSIRAIE E+Y+VVD++RNE+LEEIEESKAFFQVYEGAVY+ QG+TYLV+SL  
Sbjct: 940  KMPSRSVSIRAIEAERYKVVDQRRNEVLEEIEESKAFFQVYEGAVYMHQGRTYLVKSLNL 999

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRV------GTAARADPCKVTTSWFG 725
            S+ +AFC EADLKYYT+ RD TDIHVI G++AYP R        T A+A+ C+VTT+WFG
Sbjct: 1000 STMLAFCEEADLKYYTKTRDYTDIHVIGGNLAYPKRAPNIPPPKTTAQANDCRVTTTWFG 1059

Query: 724  FHRVERGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVL 545
            F+R+++GSNQI+++VDL+LP +SY SQAVW+PVPQS K  V   N DFRAGLHAASHA+L
Sbjct: 1060 FYRIQKGSNQILDSVDLSLPKYSYNSQAVWIPVPQSIKEEVKRKNFDFRAGLHAASHALL 1119

Query: 544  NVVPLR 527
            NVVPL+
Sbjct: 1120 NVVPLK 1125


>ref|XP_008453312.1| PREDICTED: putative ATP-dependent helicase hrq1 isoform X3 [Cucumis
            melo]
          Length = 1094

 Score =  747 bits (1929), Expect(2) = 0.0
 Identities = 362/496 (72%), Positives = 419/496 (84%)
 Frame = -1

Query: 2721 KGKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGKNVVVA 2542
            +G+IVHV DI ARKANY EIPKE+S +++SALK  GV+KLYSHQA SI+ASL+GK+V VA
Sbjct: 446  EGQIVHVNDILARKANYVEIPKELSNSVVSALKCIGVAKLYSHQARSIEASLSGKHVAVA 505

Query: 2541 TMTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSLNIGVY 2362
            TMTSSGKSLCYNLPVLE +SQ++ +CALYLFPTKALAQDQLR+LLV+ K    +LNIGVY
Sbjct: 506  TMTSSGKSLCYNLPVLEAMSQDVSSCALYLFPTKALAQDQLRSLLVMMKGFIHNLNIGVY 565

Query: 2361 DGDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAYKGAFG 2182
            DGDT + +R  LRDN RLLITNPDMLH+SILPHH+QF RILSNLRF+V+DEAH YKGAFG
Sbjct: 566  DGDTSQADRILLRDNARLLITNPDMLHVSILPHHRQFSRILSNLRFIVIDEAHTYKGAFG 625

Query: 2181 CHTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGSPSARK 2002
            CHTALILRRLRR+CSHVYGSDPSF+F TATSANP EHC EL NL   ELI+NDGSPSARK
Sbjct: 626  CHTALILRRLRRICSHVYGSDPSFIFCTATSANPREHCMELGNLSSLELIDNDGSPSARK 685

Query: 2001 LFILWNPVLHQETVSNETNSTMCTTKSAEGIAKVKKSSPILDVSRLFAEMVQHGLRCIAF 1822
            LF+LWNPV+  ++     +S+  T K+       K  SPI+D++RLFAEMVQHGLRCIAF
Sbjct: 686  LFLLWNPVMALKSYQRGIDSSQSTKKN----ISFKNPSPIMDIARLFAEMVQHGLRCIAF 741

Query: 1821 CRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKLCGIAATN 1642
            C++RKLCELVLCYTREIL+E+APHL+ S+CAYRAGY AEDRR IE DFF G LCG+AATN
Sbjct: 742  CKTRKLCELVLCYTREILKESAPHLVQSVCAYRAGYTAEDRRRIESDFFGGNLCGVAATN 801

Query: 1641 ALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQHFMKFPR 1462
            ALELGIDVGHID TLHLGFPGSIASLWQQAGRAGRRE  SL+VYVAF+GPLDQ+FMK P 
Sbjct: 802  ALELGIDVGHIDATLHLGFPGSIASLWQQAGRAGRREKTSLSVYVAFEGPLDQYFMKHPE 861

Query: 1461 KLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSLKNSGYLX 1282
            KLFGSPIECCHIDA+N+QV+EQHL+CAAYEHP+ + YD+ +FG GL+ A+MSLKN G L 
Sbjct: 862  KLFGSPIECCHIDAENQQVLEQHLLCAAYEHPVCVAYDQIFFGPGLNNALMSLKNRGDLI 921

Query: 1281 XXXXXXXXSKLWNYIG 1234
                      +WNYIG
Sbjct: 922  PEPSCGSSKSIWNYIG 937



 Score =  295 bits (754), Expect(2) = 0.0
 Identities = 185/453 (40%), Positives = 271/453 (59%), Gaps = 17/453 (3%)
 Frame = -2

Query: 4031 MATSDIEIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQ 3852
            M  S+ EI+++T++G+S T+ VS NS+++DLKLLL++ FP A  SPNFHLF+KG KLK Q
Sbjct: 1    MEESEREIRIKTLTGESMTVSVSGNSTIDDLKLLLRRNFPSATISPNFHLFFKGTKLKPQ 60

Query: 3851 RKVGTLDMGNSEFLVLVPFAKRDSNQTQNSSQPKASMKVPNQPSISKFAESAWSDMMHDL 3672
             ++    + + EFLVL+PF K++S++++   Q +    V +  SIS+FA+SAWSDM+ DL
Sbjct: 61   SQISACCIDHGEFLVLIPFNKKESSKSRLRDQYELEFSVSSGTSISQFADSAWSDMVQDL 120

Query: 3671 SYLSDDPV----AKAPEFEIAGNLRNRRDASAGLANSWSSEAKRKRGSI---------EC 3531
            SYL    V        E E A +     DA      S SS + + +G +           
Sbjct: 121  SYLHGCSVEGREETVSESERASSEVGEVDAELEACCSTSSLSSKAKGKLGFGNDGLNGSL 180

Query: 3530 DDLLYDILWAPKSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSCSQAFGIGLPT 3351
            DD+L +  ++P +   L+E  CE FI+FL  V+CL+D  +GNCML+ ++ S++     P 
Sbjct: 181  DDVLRNFSFSP-TEGFLNEQTCESFIKFLESVDCLTDPRNGNCMLAKQANSRSGNKRAPN 239

Query: 3350 ND-GSTCLCPTWLKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRD 3174
            +  GS+CLCPTWLK ++KAF+FLNVFS FLQLQ+   T++ LE+A+DQL K  +  C+ D
Sbjct: 240  STRGSSCLCPTWLKKIMKAFSFLNVFSMFLQLQEEIMTVSRLEQAMDQLQKRRIMFCMED 299

Query: 3173 LEHLSIISPKVVSFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCA 2994
            + +LS + PK V FA + I+E + V  L+II   TE   + K   K +     V+  V  
Sbjct: 300  IHNLSRLCPKAVHFA-SGIMEDTRVHKLIIIIYLTEKNGRPK---KDIDN--TVSMDVTP 353

Query: 2993 LKRRENSFKSDLWKAVEQLMFITGNEK---ATFSLEGLLLSLKDRVTAASSNNRRKAKGS 2823
            LKRRE SFK  LW+A++  M   G+ +     FSLE L+ S  +      S  +R  K  
Sbjct: 354  LKRRERSFKFYLWEAIKCHMLKHGSGREMCVPFSLEALITS--NETDVDGSETKRAKKSD 411

Query: 2822 NGTSSSYSGPKRCNATNELRPVEMVDHLRKGVG 2724
              +SSS S   RC+ T++L P  MV+HL+K VG
Sbjct: 412  TASSSSQSERIRCHDTSKLLPENMVEHLKKSVG 444



 Score =  207 bits (526), Expect = 9e-50
 Identities = 97/150 (64%), Positives = 126/150 (84%), Gaps = 6/150 (4%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K+PS SVSIRAIE E+Y+VVD++RNE+LEEIEESKAFFQVYEGAVY+ QG+TYLV+SL  
Sbjct: 940  KMPSRSVSIRAIEAERYKVVDQRRNEVLEEIEESKAFFQVYEGAVYMHQGRTYLVKSLNL 999

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRV------GTAARADPCKVTTSWFG 725
            S+ +AFC EADLKYYT+ RD TDIHVI G++AYP R        T A+A+ C+VTT+WFG
Sbjct: 1000 STMLAFCEEADLKYYTKTRDYTDIHVIGGNLAYPKRAPNIPPPKTTAQANDCRVTTTWFG 1059

Query: 724  FHRVERGSNQIIETVDLTLPNFSYTSQAVW 635
            F+R+++GSNQI+++VDL+LP +SY SQ ++
Sbjct: 1060 FYRIQKGSNQILDSVDLSLPKYSYNSQLIY 1089


>ref|XP_011014683.1| PREDICTED: putative ATP-dependent helicase hrq1 isoform X2 [Populus
            euphratica]
          Length = 1214

 Score =  753 bits (1944), Expect(2) = 0.0
 Identities = 374/502 (74%), Positives = 422/502 (84%)
 Frame = -1

Query: 2736 EGSWIKGKIVHVEDIDARKANYTEIPKEISQNMISALKDFGVSKLYSHQAESIQASLAGK 2557
            EG   KG+IVHVEDID+RK  Y ++P  +S NM SALK  G++KLYSHQAESI ASL+GK
Sbjct: 422  EGIGSKGQIVHVEDIDSRKPIYVQVPNVLSDNMKSALKCMGITKLYSHQAESILASLSGK 481

Query: 2556 NVVVATMTSSGKSLCYNLPVLELLSQNLLACALYLFPTKALAQDQLRALLVLTKELDGSL 2377
            NVVVATMTSSGKSLCYN+PVLE LSQ+L ACALYLFPTKALAQDQLRAL  ++K  D S+
Sbjct: 482  NVVVATMTSSGKSLCYNVPVLEALSQDLSACALYLFPTKALAQDQLRALAKMSKGFDTSI 541

Query: 2376 NIGVYDGDTPKEERKWLRDNVRLLITNPDMLHMSILPHHKQFERILSNLRFVVVDEAHAY 2197
            NIG+YDGDT  ++R  LR N RLLITNPDMLH+SILP+H+QF+RILSNLRFVV+DEAH Y
Sbjct: 542  NIGIYDGDTALKDRLLLRANARLLITNPDMLHLSILPYHRQFDRILSNLRFVVIDEAHYY 601

Query: 2196 KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPLEHCKELANLPKAELIENDGS 2017
            KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANP EHC ELANL   ELI+NDGS
Sbjct: 602  KGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPCEHCMELANLSTLELIKNDGS 661

Query: 2016 PSARKLFILWNPVLHQETVSNETNSTMCTTKSAEGIAKVKKSSPILDVSRLFAEMVQHGL 1837
            PS+RKLF+LWNP      V N++   M  ++S E     K  SPI +VS LFAEMVQHGL
Sbjct: 662  PSSRKLFVLWNPTSCPRIVPNKSEGPMDVSESTE-----KSMSPISEVSCLFAEMVQHGL 716

Query: 1836 RCIAFCRSRKLCELVLCYTREILEETAPHLIDSICAYRAGYIAEDRRSIERDFFSGKLCG 1657
            RCIAFCRSRKL E+VL YTREIL++TAPHL+ SICAYRAGY+AEDRR IERDFFSGKL G
Sbjct: 717  RCIAFCRSRKLTEIVLSYTREILQKTAPHLVSSICAYRAGYVAEDRRQIERDFFSGKLSG 776

Query: 1656 IAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRETPSLAVYVAFDGPLDQHF 1477
            IAATNALELGIDVGHID TLHLGFPGS ASLWQQAGR+GRRE PSLAVYVAF GPLDQ+F
Sbjct: 777  IAATNALELGIDVGHIDATLHLGFPGSFASLWQQAGRSGRRERPSLAVYVAFQGPLDQYF 836

Query: 1476 MKFPRKLFGSPIECCHIDAQNKQVIEQHLVCAAYEHPLSLLYDEKYFGFGLSTAIMSLKN 1297
            MKFP+KLF  P+ECCHIDA+N+QV++QHLVCAA EHPLSLL+DEKYFG  LS A+MSLKN
Sbjct: 837  MKFPKKLFHGPVECCHIDAENQQVLKQHLVCAALEHPLSLLHDEKYFGSSLSNALMSLKN 896

Query: 1296 SGYLXXXXXXXXXSKLWNYIGH 1231
             G L         +++W+YIGH
Sbjct: 897  KGDLSFDPSRDSFARIWSYIGH 918



 Score =  288 bits (738), Expect(2) = 0.0
 Identities = 175/449 (38%), Positives = 265/449 (59%), Gaps = 15/449 (3%)
 Frame = -2

Query: 4019 DIEIQVRTISGDSTTLWVSVNSSVEDLKLLLKQTFPPAHRSPNFHLFYKGVKLKLQRKVG 3840
            ++EI++RT++G+ST + +S    V DLKLLL      A  SPNFHLF+KGVKL L+ ++ 
Sbjct: 4    EVEIEIRTLTGESTKVRISSKKMVNDLKLLLIH----ASSSPNFHLFFKGVKLSLKTQID 59

Query: 3839 TLDMGNSEFLVLVPF-AKRDSNQTQNSSQPKASMKVPNQPSISKFAESAWSDMMHDLSYL 3663
            TL + N EFL LVPF  K+DS +T+    P      P +PSIS  A+S +S+MM DLS+L
Sbjct: 60   TLSIENGEFLALVPFNKKKDSPRTRT---PDFYKNAPTEPSISTLADSTFSEMMQDLSFL 116

Query: 3662 SDDPVAKAPEFEIAGNLRNRRDASAGLANSWSSEAKRKRG------SIECDDLLYDILWA 3501
            S+ P              +    +A  ++   S  KRKRG      S   D+ L+  LW+
Sbjct: 117  SEKPTTST----------STHSTAAPQSDYMFSGYKRKRGFKDTPTSSSSDEELFCFLWS 166

Query: 3500 ------PKSMDVLDEYKCEKFIEFLNLVNCLSDLHSGNCMLSIRSCSQAFGIGLPTNDGS 3339
                    +  V D+ KCEKF+E L+  +CL++ HS  C+           +GL  +  S
Sbjct: 167  VLRSPNKNNYIVDDKTKCEKFVEVLDSFSCLTNPHSRTCVF--------LDLGLCGDKRS 218

Query: 3338 TCLCPTWLKILLKAFAFLNVFSAFLQLQQARTTLNLLEEALDQLGKFGVKLCIRDLEHLS 3159
            +CLCP WLK +++AFAFLN+F+AFLQ+Q+   T + L+EAL  L K G+K    D+E LS
Sbjct: 219  SCLCPAWLKRIMQAFAFLNIFTAFLQMQRQEITSDSLKEALKNLAKSGLKAGFEDIELLS 278

Query: 3158 IISPKVVSFANNAILERSHVDALVIIKRPTEYQEQVKYKHKSVSRQMNVAEIVCALKRRE 2979
            ++ PKV+ FA N     +  D  VII   T+ ++++    +   + ++++ I   +K++E
Sbjct: 279  VLCPKVIFFATNDSKFANAADVFVIINSETKDKDEIGEPSRKGKKSLSLSTIFDKMKKQE 338

Query: 2978 NSFKSDLWKAVEQLMFITGNEKA-TFSLEGLLLSLKDRVTAASSNNRRKAKGSNGT-SSS 2805
            ++FK++LW+A + L+    N  A  FSLE LL  ++    + S +  ++AKG + + SSS
Sbjct: 339  SAFKTNLWEAAKFLLCKIENRVAMPFSLEDLLKFVRKDGISVSESEAKQAKGCHSSASSS 398

Query: 2804 YSGPKRCNATNELRPVEMVDHLRKGVGSK 2718
            YS   RC+ TN+L PVEMV+HLR+G+GSK
Sbjct: 399  YSFQSRCHETNQLLPVEMVEHLREGIGSK 427



 Score =  396 bits (1018), Expect = e-107
 Identities = 187/285 (65%), Positives = 225/285 (78%), Gaps = 6/285 (2%)
 Frame = -3

Query: 1066 KLPSHSVSIRAIETEKYRVVDKQRNEILEEIEESKAFFQVYEGAVYIRQGKTYLVESLEF 887
            K+PS  +SIRAIE+ +YRV+D QRNE+LEEIEESKAFFQ+YEGAVY+ QGKTY+V+ L+ 
Sbjct: 920  KMPSRGISIRAIESTRYRVIDMQRNEVLEEIEESKAFFQIYEGAVYMHQGKTYMVKELDI 979

Query: 886  SSKIAFCVEADLKYYTRPRDCTDIHVISGHIAYPTRV------GTAARADPCKVTTSWFG 725
            S KIA C EADL YYT+ RD TDI V+ G IAY  R        TAA+A  CKVTT+WFG
Sbjct: 980  SEKIALCYEADLHYYTKTRDYTDIDVLGGDIAYAPRAFKNQSSRTAAQALSCKVTTTWFG 1039

Query: 724  FHRVERGSNQIIETVDLTLPNFSYTSQAVWVPVPQSTKLAVTMNNLDFRAGLHAASHAVL 545
            F+ ++RGSN++++T DL+LP +SY SQAVW+PVPQ  K  V      FR GLHAASHA+L
Sbjct: 1040 FYCIQRGSNKVLDTFDLSLPKYSYESQAVWIPVPQPIKKLVEEKQFSFRGGLHAASHALL 1099

Query: 544  NVVPLRIICDSLDLAPECPNPHDTRYYPERILLYDQHPGGMGVSMQVQPFFMXXXXXXXX 365
            NVVPL I C+S DLAPECPNPHD+RY+PERIL+YDQHPGG GVSMQ+QP+F         
Sbjct: 1100 NVVPLYIRCNSSDLAPECPNPHDSRYFPERILVYDQHPGGTGVSMQIQPYFTELLNAALE 1159

Query: 364  XLSFCCCSGNTGCPNCIQNFACHEYNEVLHKDAAIMIIKGVLDAE 230
             L++C CSG+TGCPNC+Q+  CHEYNEV+HKDAAIMIIKGVLDAE
Sbjct: 1160 LLTYCHCSGDTGCPNCVQSMVCHEYNEVIHKDAAIMIIKGVLDAE 1204