BLASTX nr result
ID: Ziziphus21_contig00004689
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00004689
(3427 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun... 1582 0.0
ref|XP_008243783.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1574 0.0
ref|XP_008339743.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 1546 0.0
ref|XP_009355625.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1545 0.0
ref|XP_008389363.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1537 0.0
ref|XP_009356470.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1529 0.0
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob... 1496 0.0
ref|XP_012438460.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 1487 0.0
ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 1474 0.0
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1463 0.0
ref|XP_012438461.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 1461 0.0
ref|XP_012573866.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 1443 0.0
ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 1439 0.0
ref|XP_004509767.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 1439 0.0
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m... 1438 0.0
gb|KJB50511.1| hypothetical protein B456_008G174700 [Gossypium r... 1426 0.0
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1422 0.0
ref|XP_011021147.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 1421 0.0
ref|XP_012080481.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 1420 0.0
ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu... 1419 0.0
>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
gi|462422319|gb|EMJ26582.1| hypothetical protein
PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 1582 bits (4096), Expect = 0.0
Identities = 782/1007 (77%), Positives = 878/1007 (87%), Gaps = 16/1007 (1%)
Frame = -2
Query: 3423 RNLTKQAASRKIINFSYESQISSWFSSTAKFSKDSTFLEKVRPFSG----NSRFTVLGFS 3256
RNL KQ ASRK N S +S S S++ FS++S+FL+K R F N+R V+GF
Sbjct: 3 RNLAKQVASRKT-NLSSQSHFGSPSSTSMIFSQESSFLDKARHFEARKCINNRILVMGFR 61
Query: 3255 PNGPISSQIENLRKPSLLNSGKPFGVSGFCNGVKGYASVAEAIVSTDAEEESSGLDENHH 3076
G ++SQ E L + S LN P+G+SGFCN KGYASVAEAI STD EE+SSG +E
Sbjct: 62 QVGDMASQKEELGRCSSLNPSYPYGISGFCNYAKGYASVAEAIASTDGEEDSSGSEEI-- 119
Query: 3075 QDLLDEIERQNK-VDSYLKKPKRMVAGVGISKYNSLRKKQIEIETEAWQEAAKEYRELLM 2899
Q++L+++ R+N V+S+ K+PKR+V G+G+ KYN LRK+QI++ETEAWQEAAKEY+ELL
Sbjct: 120 QEMLEDLIRENNMVESHFKQPKRVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEYQELLA 179
Query: 2898 DMCEQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVI 2719
DMCEQKLAPNLPY+KSLFLGWFEPLR+AIAADQ C + ++ S+APY DHLPAD MAVI
Sbjct: 180 DMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQSHAPYFDHLPADKMAVI 239
Query: 2718 TMHKLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTKK--NTIDNKPKGES 2545
TMHKLMGLLMTN+GGIG+VRVVQAAC IGEA+EHEVRIHRFLEKTKK NTID K + +S
Sbjct: 240 TMHKLMGLLMTNNGGIGSVRVVQAACAIGEAIEHEVRIHRFLEKTKKKKNTIDKKAEADS 299
Query: 2544 ACVT-------NEQEKQIKDQQKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEAHVK 2386
VT +EQEK K+Q++LRKKV +LIK+QK++QVRGIVKEQ+D KPWGQEAHVK
Sbjct: 300 VPVTIEQEKLADEQEKLTKEQERLRKKVNKLIKRQKMQQVRGIVKEQEDLKPWGQEAHVK 359
Query: 2385 IGSRLMQLLMETAYIQPPVDQLGDGPPDLRPAFVHTLKTV--ETPKGSRRYGVIECDPLV 2212
+G RL+QLLM+TAYIQPPVDQ+GDGPPD+RPAFVH LKT+ +T K SRRYGVIECDP+V
Sbjct: 360 VGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQKTSRRYGVIECDPIV 419
Query: 2211 RKGLEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKKQ 2032
RKG+EKTARHMV+PYMPMLVPPINWTGYD+GAYLFLPSYVMRTHGA+QQRE VKRTP+KQ
Sbjct: 420 RKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQREVVKRTPRKQ 479
Query: 2031 LDPIFEALDTLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEIR 1852
L+P+FEALDTLG+TKWR+NKRVLGVIDRIWA GGR ADLVDR+DVPLPEEPDTEDEAEIR
Sbjct: 480 LEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIR 539
Query: 1851 XXXXXXXXXXKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 1672
KEN+ER+SQRCDIELKLA +RKMKDEEGFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 540 KWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 599
Query: 1671 LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFDS 1492
LGSD+CRGILEF+EGR LGKSGLRWLKIHLANLY GGVDK S+D R FTE H+D+IFDS
Sbjct: 600 LGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAFTENHVDEIFDS 659
Query: 1491 ADRPLEGGRWWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAAL 1312
ADRPLEG RWW AEDPFQCLAACINL EALRSPSPETTIS+MPVHQDGSCNGLQHYAAL
Sbjct: 660 ADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGSCNGLQHYAAL 719
Query: 1311 GRDTTGAAAVNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDRK 1132
GRD GAAAVNLVGG +PADVYS IA RV +IM+NDAEKDPATNPNALHARLLINQVDRK
Sbjct: 720 GRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHARLLINQVDRK 779
Query: 1131 LVKQTVMTSVYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTNA 952
LVKQTVMTSVYGVTY+GARDQIKRRLKER SI DD A+FAA+CYAARTTL AL +MF A
Sbjct: 780 LVKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACYAARTTLTALGEMFEAA 839
Query: 951 RDIMKWLGDCAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKIM 772
R IM WLG+CAKVIASENQPV+W TPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDK+M
Sbjct: 840 RSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVM 899
Query: 771 VKRQKTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREKF 592
VKRQ+TAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACD+D+MNRILREKF
Sbjct: 900 VKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDIDEMNRILREKF 959
Query: 591 VELYEAPILENLLESFEKTFPTLKFPALPGRGDFDLREVLESPYFFN 451
VELYEAPILENLLE F+++FPTL FP LP RGDFDLR+VLESPYFFN
Sbjct: 960 VELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006
>ref|XP_008243783.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Prunus mume]
Length = 1006
Score = 1574 bits (4076), Expect = 0.0
Identities = 778/1007 (77%), Positives = 875/1007 (86%), Gaps = 16/1007 (1%)
Frame = -2
Query: 3423 RNLTKQAASRKIINFSYESQISSWFSSTAKFSKDSTFLEKVRPFSG----NSRFTVLGFS 3256
RNL KQ ASRK N S +S SS S++ FS++S+FLEK F N+R V+GF
Sbjct: 3 RNLAKQVASRKT-NLSSQSHFSSPSSTSMIFSQESSFLEKAWHFEARKCINNRILVMGFR 61
Query: 3255 PNGPISSQIENLRKPSLLNSGKPFGVSGFCNGVKGYASVAEAIVSTDAEEESSGLDENHH 3076
G ++SQ + L + S LN P+G+SGFCN KGYASVAEAI STD EE+SSG +E
Sbjct: 62 QVGDMASQKDELGRCSSLNPSYPYGISGFCNYAKGYASVAEAIASTDGEEDSSGSEEI-- 119
Query: 3075 QDLLDEIERQNK-VDSYLKKPKRMVAGVGISKYNSLRKKQIEIETEAWQEAAKEYRELLM 2899
Q++L+++ R+N V+S+ K+PKR+V G+G+ KYN LRK+QI++ETEAWQEAAKEY+ELL
Sbjct: 120 QEMLEDLIRENNMVESHFKQPKRVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEYQELLA 179
Query: 2898 DMCEQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVI 2719
DMCEQKLAPNLPY+KSLFLGWFEPLR+AIAADQ C + ++ S+APY DHLPAD MAVI
Sbjct: 180 DMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQTNSRQSHAPYFDHLPADKMAVI 239
Query: 2718 TMHKLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTKK--NTIDNKPKGES 2545
TMHKLMGLLMTN+GG+G+VRVVQAAC IGEA+EHEVRIHRFLEKTKK NT D K + +S
Sbjct: 240 TMHKLMGLLMTNNGGVGSVRVVQAACAIGEAIEHEVRIHRFLEKTKKKKNTTDKKAEADS 299
Query: 2544 ACVTNEQEKQIKDQ-------QKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEAHVK 2386
VT+EQEK +Q +KLRKKV +LIK+QK++QVRGIVKEQ+D KPWGQEAHVK
Sbjct: 300 VPVTDEQEKLADEQGKLADEQEKLRKKVNKLIKRQKMQQVRGIVKEQEDLKPWGQEAHVK 359
Query: 2385 IGSRLMQLLMETAYIQPPVDQLGDGPPDLRPAFVHTLKTV--ETPKGSRRYGVIECDPLV 2212
+G RL+QLLM+TAYIQPPVDQ+GDGPPD+RPAFVH LKT+ +T K SRRYGVIECDPLV
Sbjct: 360 VGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITKDTQKTSRRYGVIECDPLV 419
Query: 2211 RKGLEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKKQ 2032
RKG++KTARHMV+PYMPMLVPPINWTGYD+GAYLFLPSYVMRTHGA+QQRE VKRTP+KQ
Sbjct: 420 RKGMDKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQREVVKRTPRKQ 479
Query: 2031 LDPIFEALDTLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEIR 1852
L+P+FEALDTLG+TKWR+NKRVLGVIDRIWA GGR ADLVDR+DVPLPEEPDTEDEAEIR
Sbjct: 480 LEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIR 539
Query: 1851 XXXXXXXXXXKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 1672
KEN+ER+SQRCDIELKLA +RKMKDEEGFYYPHNLDFRGRAYPMHPYLNH
Sbjct: 540 KWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 599
Query: 1671 LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFDS 1492
LGSD+CRGILEF+EGR LGKSGLRWLKIHLANLY GGVDK S+D R FTE H+D+IFDS
Sbjct: 600 LGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAFTENHVDEIFDS 659
Query: 1491 ADRPLEGGRWWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAAL 1312
ADRPLEG RWW AEDPFQCLAACINL EALRSPSPETTIS+MPVHQDGSCNGLQHYAAL
Sbjct: 660 ADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGSCNGLQHYAAL 719
Query: 1311 GRDTTGAAAVNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDRK 1132
GRD GAAAVNLVGG +PADVYS IA RV +IM+NDAEKDPATNPNALHARLLINQVDRK
Sbjct: 720 GRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHARLLINQVDRK 779
Query: 1131 LVKQTVMTSVYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTNA 952
LVKQTVMTSVYGVTY+GAR+QIKRRLKER SI DD A+F A+CYAARTTL AL +MF A
Sbjct: 780 LVKQTVMTSVYGVTYVGAREQIKRRLKERGSIADDTALFVAACYAARTTLTALGEMFEAA 839
Query: 951 RDIMKWLGDCAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKIM 772
R IM WLG+CAKVIASENQPV+W TPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDK+M
Sbjct: 840 RSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVM 899
Query: 771 VKRQKTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREKF 592
VKRQ+TAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACD+D+MNRILREKF
Sbjct: 900 VKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDIDEMNRILREKF 959
Query: 591 VELYEAPILENLLESFEKTFPTLKFPALPGRGDFDLREVLESPYFFN 451
VELYEAPILENLLE F+++FPTL FP LP RGDFDLR+VLESPYFFN
Sbjct: 960 VELYEAPILENLLEGFQRSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006
>ref|XP_008339743.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Malus
domestica]
Length = 1007
Score = 1546 bits (4004), Expect = 0.0
Identities = 769/1008 (76%), Positives = 871/1008 (86%), Gaps = 17/1008 (1%)
Frame = -2
Query: 3423 RNLTKQAASRKIINFSYESQISSWFSSTAKFSKDSTFLEKVRPFSG----NSRFTVLGFS 3256
RN K+ ASRK N S + + S SS+ KFS++S+F++K R F NSR V+GF
Sbjct: 3 RNFAKKVASRKA-NPSSQFHLGSATSSSVKFSQESSFIKKTRHFEARNCVNSRLLVMGFR 61
Query: 3255 PNGPISSQIENLRKPSLLNSGKPFGVSGFCNGVKGYASVAEAIVSTDAEEESSGLDENHH 3076
G +SQ + L + SLLN GVSGFC+ +GYAS AEAI STD +EESSG +E
Sbjct: 62 KIGDTASQKDELGRCSLLNPSYFHGVSGFCSYARGYASAAEAIASTDGDEESSGSEEI-- 119
Query: 3075 QDLLDEIERQN-KVDSYLKKPKRMVAGVGISKYNSLRKKQIEIETEAWQEAAKEYRELLM 2899
Q+LL+++ R+N KV+S+ K+PK++VAG+G+ KYN LRK+QI++ETEAW+EAA EY+ELL+
Sbjct: 120 QELLEDLIRENNKVESHFKQPKKVVAGIGVGKYNXLRKRQIKLETEAWEEAANEYQELLV 179
Query: 2898 DMCEQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVI 2719
DMCEQKLAPNLPY+KSLFLGWFEPLRNAIA DQ+ C + N+ S+APY+D LPAD MAVI
Sbjct: 180 DMCEQKLAPNLPYIKSLFLGWFEPLRNAIAEDQEACRQPHNRVSHAPYIDLLPADKMAVI 239
Query: 2718 TMHKLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTKK--NTIDNKPKGES 2545
TMHKLMGLLMTN+GG+G+VRVVQAAC IGEA+E+EVRIHRFL+KTKK N D KP+ ES
Sbjct: 240 TMHKLMGLLMTNNGGVGSVRVVQAACAIGEAIENEVRIHRFLDKTKKKKNPTDKKPEDES 299
Query: 2544 ACVT--------NEQEKQIKDQQKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEAHV 2389
V +EQEK K+Q++LRKKV +LIKKQK+KQVR IVKEQ+D KPWGQEAHV
Sbjct: 300 DPVIIEQEQLSISEQEKLTKEQERLRKKVNKLIKKQKMKQVREIVKEQEDLKPWGQEAHV 359
Query: 2388 KIGSRLMQLLMETAYIQPPVDQLGDGPPDLRPAFVHTLKTV--ETPKGSRRYGVIECDPL 2215
K+G RL+QLLM+TAYIQPPVDQ GD P D+RPAFVH LKT+ +T K SRRYGVIECDPL
Sbjct: 360 KVGCRLIQLLMDTAYIQPPVDQSGDDPLDIRPAFVHVLKTITKDTQKTSRRYGVIECDPL 419
Query: 2214 VRKGLEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKK 2035
VRKG+EK+ARHMVIPYMPMLVPPINWTGYD+GAYLFLPSYVMRTHGA+QQR+ VKRTP+
Sbjct: 420 VRKGMEKSARHMVIPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQRQVVKRTPRX 479
Query: 2034 QLDPIFEALDTLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEI 1855
QL+P+FEALDTLG+TKWR+NKRVLGVIDRIWA GGR ADLVDR+DVPLPEEPDTEDE EI
Sbjct: 480 QLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDETEI 539
Query: 1854 RXXXXXXXXXXKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLN 1675
+ KEN+ER+SQRCDIELKLAV+RKMKDEEGFYYPHNLDFRGRAYPMHPYLN
Sbjct: 540 KKWKWKVKAAKKENSERHSQRCDIELKLAVSRKMKDEEGFYYPHNLDFRGRAYPMHPYLN 599
Query: 1674 HLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFD 1495
HLGSD+CRGILEFAEGR LGKSGL+WLKIHLANLY GGVDK S+D RV FTE H+D+IFD
Sbjct: 600 HLGSDMCRGILEFAEGRRLGKSGLQWLKIHLANLYAGGVDKLSFDERVAFTENHVDEIFD 659
Query: 1494 SADRPLEGGRWWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAA 1315
SA RPLEG RWW AEDPFQCLAACINL EALRSPSPETTIS+MPVHQDGSCNGLQHYAA
Sbjct: 660 SAVRPLEGRRWWLGAEDPFQCLAACINLYEALRSPSPETTISYMPVHQDGSCNGLQHYAA 719
Query: 1314 LGRDTTGAAAVNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDR 1135
LGRD GAAAVNLVGG +PADVYS IA RV +IM++DAEKDPATNPNALHARLLINQVDR
Sbjct: 720 LGRDKLGAAAVNLVGGEKPADVYSGIAXRVLDIMRSDAEKDPATNPNALHARLLINQVDR 779
Query: 1134 KLVKQTVMTSVYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTN 955
KLVKQTVMTSVYGVTY+GARDQIKRRLKERN+I DD+A+FAA+CYAARTTL AL +MF
Sbjct: 780 KLVKQTVMTSVYGVTYVGARDQIKRRLKERNNIADDSALFAAACYAARTTLTALGEMFEA 839
Query: 954 ARDIMKWLGDCAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKI 775
AR IM WLG+CAKVIASEN PVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDK+
Sbjct: 840 ARSIMSWLGECAKVIASENHPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKV 899
Query: 774 MVKRQKTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREK 595
MVKRQ+TAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVD+MNRILREK
Sbjct: 900 MVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREK 959
Query: 594 FVELYEAPILENLLESFEKTFPTLKFPALPGRGDFDLREVLESPYFFN 451
FVELY+APILENLLE F+++FP + FP LP RGDFDLR+VLESPYFFN
Sbjct: 960 FVELYDAPILENLLEGFQESFPNMTFPPLPDRGDFDLRDVLESPYFFN 1007
>ref|XP_009355625.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Pyrus x
bretschneideri]
Length = 1007
Score = 1545 bits (4001), Expect = 0.0
Identities = 770/1008 (76%), Positives = 867/1008 (86%), Gaps = 17/1008 (1%)
Frame = -2
Query: 3423 RNLTKQAASRKIINFSYESQISSWFSSTAKFSKDSTFLEKVRPFSG----NSRFTVLGFS 3256
RN K+ ASRK N S + + SS+ KFS++S+F+EK R F N+R V+GF
Sbjct: 3 RNFAKKVASRKA-NPSSQFHLGFATSSSVKFSQESSFIEKTRHFDARNCVNNRLLVMGFR 61
Query: 3255 PNGPISSQIENLRKPSLLNSGKPFGVSGFCNGVKGYASVAEAIVSTDAEEESSGLDENHH 3076
G +SQ + L + SLLN GVSGF +GYAS AEAI STD +EESSG +E
Sbjct: 62 QIGDTASQKDELGRCSLLNPSYFHGVSGFYGYARGYASAAEAIASTDGDEESSGSEEI-- 119
Query: 3075 QDLLDEIERQN-KVDSYLKKPKRMVAGVGISKYNSLRKKQIEIETEAWQEAAKEYRELLM 2899
Q+LL+++ R+N KV+S+ K+PK++VAG+G+ KYN LRK+QI++ETEAW+EAA EY+ELL+
Sbjct: 120 QELLEDLIRENNKVESHFKQPKKVVAGIGVGKYNLLRKRQIKLETEAWEEAANEYQELLV 179
Query: 2898 DMCEQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVI 2719
DMCEQKLAPNLPY+KSLFLGWFEPLRNAIA DQ+ C + N+ S+APY+DHLPAD MAVI
Sbjct: 180 DMCEQKLAPNLPYIKSLFLGWFEPLRNAIAEDQEACRQPNNRVSHAPYIDHLPADKMAVI 239
Query: 2718 TMHKLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTKK--NTIDNKPKGES 2545
TMHKLMGLLMTN+GG+G+VRVVQAAC IGEA+E+EVRIHRFLEKTKK N D KP+ ES
Sbjct: 240 TMHKLMGLLMTNNGGVGSVRVVQAACAIGEAIENEVRIHRFLEKTKKKKNPTDKKPEDES 299
Query: 2544 ACVT--------NEQEKQIKDQQKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEAHV 2389
V +EQEK K+QQ+LRKKV +LIKKQK+KQVR IVKEQ+D KPWGQEAHV
Sbjct: 300 DPVIIEQEQLMISEQEKLTKEQQRLRKKVNKLIKKQKMKQVREIVKEQEDLKPWGQEAHV 359
Query: 2388 KIGSRLMQLLMETAYIQPPVDQLGDGPPDLRPAFVHTLKTV--ETPKGSRRYGVIECDPL 2215
K+G RL+QLLM+TAYIQPPVDQ GD P D+RPAFVH LKT+ +T K SRRYGVIECDPL
Sbjct: 360 KVGCRLIQLLMDTAYIQPPVDQSGDDPLDIRPAFVHVLKTITKDTQKTSRRYGVIECDPL 419
Query: 2214 VRKGLEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKK 2035
VRKG+EK+ARHMVIPYMPMLVPPINWTGYD+GAYLFLPSYVMRTHGA+QQR+ VKRTP+
Sbjct: 420 VRKGMEKSARHMVIPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQRQVVKRTPRT 479
Query: 2034 QLDPIFEALDTLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEI 1855
QL+P+FEALDTLG+TKWR+NKRVLGVIDRIWA GGR ADLVDR+DVPLPEEPDTEDE EI
Sbjct: 480 QLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDETEI 539
Query: 1854 RXXXXXXXXXXKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLN 1675
+ KEN+ER+SQRCDIELKLAV+RKMKDEEGFYYPHNLDFRGRAYPMHPYLN
Sbjct: 540 KKWKWKVKAAKKENSERHSQRCDIELKLAVSRKMKDEEGFYYPHNLDFRGRAYPMHPYLN 599
Query: 1674 HLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFD 1495
HLGSD+CRGILEFAEGRPLGKSGLRWLKIHLANLY GGVDK S+D RV FTE H+D+IFD
Sbjct: 600 HLGSDMCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSFDERVAFTENHVDEIFD 659
Query: 1494 SADRPLEGGRWWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAA 1315
SA RPLEG RWW AEDPFQCLAACINL EALRSPSPETTIS+MPVHQDGSCNGLQHYAA
Sbjct: 660 SAVRPLEGKRWWLGAEDPFQCLAACINLYEALRSPSPETTISYMPVHQDGSCNGLQHYAA 719
Query: 1314 LGRDTTGAAAVNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDR 1135
LGRD GAAAVNLVGG +PADVYS IA RV +IM++DAEKDPATNPNALHARLLINQVDR
Sbjct: 720 LGRDKLGAAAVNLVGGEKPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLINQVDR 779
Query: 1134 KLVKQTVMTSVYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTN 955
KLVKQTVMTSVYGVTY+GARDQIKRRLKERN+I DD+A+F A+CYAARTTL AL +MF
Sbjct: 780 KLVKQTVMTSVYGVTYVGARDQIKRRLKERNNIADDSALFNAACYAARTTLTALGEMFEA 839
Query: 954 ARDIMKWLGDCAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKI 775
AR IM WLG+CAKVIASEN PVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDK+
Sbjct: 840 ARSIMSWLGECAKVIASENHPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKV 899
Query: 774 MVKRQKTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREK 595
MVKRQ+TAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVD+MN ILREK
Sbjct: 900 MVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNGILREK 959
Query: 594 FVELYEAPILENLLESFEKTFPTLKFPALPGRGDFDLREVLESPYFFN 451
FVELY APILENLLE F+++FP + FP LP RGDFDLR+VLESPYFFN
Sbjct: 960 FVELYNAPILENLLEGFQESFPNMTFPPLPDRGDFDLRDVLESPYFFN 1007
>ref|XP_008389363.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Malus
domestica]
Length = 1007
Score = 1537 bits (3979), Expect = 0.0
Identities = 763/1008 (75%), Positives = 866/1008 (85%), Gaps = 17/1008 (1%)
Frame = -2
Query: 3423 RNLTKQAASRKIINFSYESQISSWFSSTAKFSKDSTFLEKVRPFSG----NSRFTVLGFS 3256
RN K+ ASRK N S + + S SS+ KF ++S+FLEK R F N+RF V+GF
Sbjct: 3 RNFAKKVASRKX-NLSSQFHLGSATSSSVKFYQESSFLEKTRHFEARNCANNRFLVMGFP 61
Query: 3255 PNGPISSQIENLRKPSLLNSGKPFGVSGFCNGVKGYASVAEAIVSTDAEEESSGLDENHH 3076
G +SQ + L + SL+N VSGFC+ +GYAS AEAI STD EE+SSG +E
Sbjct: 62 QIGDKASQKDELGRCSLMNPSYSHAVSGFCSYARGYASAAEAIASTDGEEDSSGSEEI-- 119
Query: 3075 QDLLDEIERQN-KVDSYLKKPKRMVAGVGISKYNSLRKKQIEIETEAWQEAAKEYRELLM 2899
Q+LL+++ R+N KV+S+ K+ K++V G+G+ KYN LRK+QI++ETEAW+EAA EY+ELL+
Sbjct: 120 QELLEDLIRENNKVESHFKQTKKVVGGMGVGKYNLLRKRQIKLETEAWEEAANEYQELLV 179
Query: 2898 DMCEQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVI 2719
DMCEQKLAPNLPY+KSLFLGWFEPLRNAIA DQ+ C + ++ S+APY DHLPAD MAVI
Sbjct: 180 DMCEQKLAPNLPYIKSLFLGWFEPLRNAIAEDQEACRQPNSRASHAPYFDHLPADKMAVI 239
Query: 2718 TMHKLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTKK--NTIDNKPKGES 2545
TMHKLMGLLMTN+GG+G+VRVVQAAC IGEA+E+EVRIHRFLEKTKK N D KP+ ES
Sbjct: 240 TMHKLMGLLMTNNGGVGSVRVVQAACAIGEAIENEVRIHRFLEKTKKKKNLTDKKPEDES 299
Query: 2544 ACVT--------NEQEKQIKDQQKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEAHV 2389
V +EQEK K++++LRKKV +LIKKQK+KQVR IVKEQ+D KPWGQEAHV
Sbjct: 300 DPVAIEQEKLTISEQEKLTKEKERLRKKVNKLIKKQKMKQVREIVKEQEDLKPWGQEAHV 359
Query: 2388 KIGSRLMQLLMETAYIQPPVDQLGDGPPDLRPAFVHTLKTV--ETPKGSRRYGVIECDPL 2215
K+G RL+QLLM+TAYIQPPVDQ GD D+RPAFVH LKTV +T K SRRYG+IECDPL
Sbjct: 360 KVGCRLIQLLMDTAYIQPPVDQSGDASLDIRPAFVHVLKTVTKDTQKTSRRYGMIECDPL 419
Query: 2214 VRKGLEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKK 2035
V KG+EKTARHMVIPYMPMLVPPINWTGYD+GAYLFLPSYVMRTHGA+QQR+ VKRTP+
Sbjct: 420 VHKGMEKTARHMVIPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQRQVVKRTPRT 479
Query: 2034 QLDPIFEALDTLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEI 1855
QL+P+FEALDTLG+TKWR+NKRVLGVIDRIWA GG ADLVDR+DVPLPEEPDTEDE EI
Sbjct: 480 QLEPVFEALDTLGSTKWRVNKRVLGVIDRIWANGGHLADLVDREDVPLPEEPDTEDETEI 539
Query: 1854 RXXXXXXXXXXKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLN 1675
+ KEN+ER+SQRCDIELKLAV+RKMKDEEGFYYPHNLDFRGRAYPMHPYLN
Sbjct: 540 KKWKWKVKDAKKENSERHSQRCDIELKLAVSRKMKDEEGFYYPHNLDFRGRAYPMHPYLN 599
Query: 1674 HLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFD 1495
HLGSD+CRGILEF+EGR LGKSGLRWLKIHLANLY GGVDK S+D RV FTE H+D+IFD
Sbjct: 600 HLGSDMCRGILEFSEGRRLGKSGLRWLKIHLANLYAGGVDKLSFDGRVAFTENHVDEIFD 659
Query: 1494 SADRPLEGGRWWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAA 1315
SADR LEG RWW AEDPFQCLAACINL+EALRSPSPETT+S+MPVHQDGSCNGLQHYAA
Sbjct: 660 SADRXLEGRRWWLGAEDPFQCLAACINLAEALRSPSPETTVSYMPVHQDGSCNGLQHYAA 719
Query: 1314 LGRDTTGAAAVNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDR 1135
LGRD GAAAVNLVGG +PADVYS IA RV +IM++DAEKDPATNPNALHARLL+NQVDR
Sbjct: 720 LGRDKLGAAAVNLVGGEKPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLVNQVDR 779
Query: 1134 KLVKQTVMTSVYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTN 955
KLVKQTVMTSVYGVTY+GARDQIKRRLKER +I DD+A+FAA+CYAARTTL AL +MF
Sbjct: 780 KLVKQTVMTSVYGVTYVGARDQIKRRLKERGNIADDSALFAAACYAARTTLTALGEMFEA 839
Query: 954 ARDIMKWLGDCAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKI 775
AR IM WLG+CAKVIASEN PV+WTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDK+
Sbjct: 840 ARSIMSWLGECAKVIASENHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKV 899
Query: 774 MVKRQKTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREK 595
MVKRQ+TAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVD+MNRILREK
Sbjct: 900 MVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREK 959
Query: 594 FVELYEAPILENLLESFEKTFPTLKFPALPGRGDFDLREVLESPYFFN 451
FVELYEAPILENLLESF+++FP L FP LP RGDFDLR+VLESPYFFN
Sbjct: 960 FVELYEAPILENLLESFQESFPNLTFPPLPDRGDFDLRDVLESPYFFN 1007
>ref|XP_009356470.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Pyrus x
bretschneideri]
Length = 1007
Score = 1530 bits (3960), Expect = 0.0
Identities = 760/1008 (75%), Positives = 863/1008 (85%), Gaps = 17/1008 (1%)
Frame = -2
Query: 3423 RNLTKQAASRKIINFSYESQISSWFSSTAKFSKDSTFLEKVRPFSG----NSRFTVLGFS 3256
RN K+ ASRK N S + + S SS+ KF ++S+FLEK R F N+ F V+GF
Sbjct: 3 RNFAKKVASRKA-NLSSQFHLGSATSSSVKFYQESSFLEKTRHFEARNCANNGFLVMGFR 61
Query: 3255 PNGPISSQIENLRKPSLLNSGKPFGVSGFCNGVKGYASVAEAIVSTDAEEESSGLDENHH 3076
G +SQ + L + SL+N VSGFC+ +GYAS AEAI STD EE+SSG +E
Sbjct: 62 QIGDKASQKDELGRCSLMNPSYSHAVSGFCSYARGYASAAEAIASTDGEEDSSGSEEI-- 119
Query: 3075 QDLLDEIERQN-KVDSYLKKPKRMVAGVGISKYNSLRKKQIEIETEAWQEAAKEYRELLM 2899
++LLD++ R+N KV+S+ K+ K++V G+G+ KYN LRK+QI++ETEAW+EAA EY+ELL+
Sbjct: 120 EELLDDLIRENNKVESHFKQTKKVVGGMGVGKYNLLRKRQIKLETEAWEEAANEYQELLV 179
Query: 2898 DMCEQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVI 2719
DMCEQKLAPNLPY+KSLFLGWFEPLRNAIA DQ+ C + ++ S+APY DHLPAD MAVI
Sbjct: 180 DMCEQKLAPNLPYIKSLFLGWFEPLRNAIAEDQEACRQPNSRVSHAPYFDHLPADKMAVI 239
Query: 2718 TMHKLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTKK--NTIDNKPKGES 2545
TMHKLMGLLMTN+GG+G+VRVVQAAC IGEA+E+EVRIHRFLEKTKK N D KP+ ES
Sbjct: 240 TMHKLMGLLMTNNGGVGSVRVVQAACAIGEAIENEVRIHRFLEKTKKKKNLTDKKPEDES 299
Query: 2544 ACVTNEQEKQI--------KDQQKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEAHV 2389
V EQEK K++++LRKKV +LIKKQK+KQVR IVKEQ+D KPWGQEAHV
Sbjct: 300 DPVAIEQEKLTISEQEELTKEKERLRKKVNKLIKKQKMKQVREIVKEQEDLKPWGQEAHV 359
Query: 2388 KIGSRLMQLLMETAYIQPPVDQLGDGPPDLRPAFVHTLKTV--ETPKGSRRYGVIECDPL 2215
K+G RL+QLLM+TAYIQPPVDQ GDG D+RPAFVH LKT+ +T K SRRYGVI+CDPL
Sbjct: 360 KVGCRLIQLLMDTAYIQPPVDQSGDGSLDIRPAFVHVLKTITKDTQKTSRRYGVIQCDPL 419
Query: 2214 VRKGLEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKK 2035
VRKG+EKTARHMVIPYMPMLVPPINWTGYD+GAYLFLPSYVMRTHGA+QQR+ VKRTP+
Sbjct: 420 VRKGMEKTARHMVIPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQRQVVKRTPRT 479
Query: 2034 QLDPIFEALDTLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEI 1855
QL+P+FEALDTLG+TKWR+NKRVLGVIDRIWA GG ADLVDR+DVPLPEEPDTEDE EI
Sbjct: 480 QLEPVFEALDTLGSTKWRVNKRVLGVIDRIWANGGHLADLVDREDVPLPEEPDTEDETEI 539
Query: 1854 RXXXXXXXXXXKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLN 1675
+ KEN ER+SQRCDIELKLAV+RKMKDEEGFYYPHNLDFRGRAYPMHPYLN
Sbjct: 540 KKWKWKVKDAKKENCERHSQRCDIELKLAVSRKMKDEEGFYYPHNLDFRGRAYPMHPYLN 599
Query: 1674 HLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFD 1495
HLGSD+CR ILEF+EGR LGK GLRWLKIHLANLY G VDK S+D RV FTE H+D+IFD
Sbjct: 600 HLGSDMCRSILEFSEGRRLGKLGLRWLKIHLANLYAGAVDKLSFDGRVAFTENHVDEIFD 659
Query: 1494 SADRPLEGGRWWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAA 1315
SADRPLEG RWW AEDPFQCLAACINL+EALRSPSPETT+S+MPVHQDGSCNGLQHYAA
Sbjct: 660 SADRPLEGRRWWLGAEDPFQCLAACINLAEALRSPSPETTVSYMPVHQDGSCNGLQHYAA 719
Query: 1314 LGRDTTGAAAVNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDR 1135
LGRD GAAAVNLVGG +PADVYS IA RV +IM++DAEKDPATNPNALHARLL+NQVDR
Sbjct: 720 LGRDRLGAAAVNLVGGEKPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLVNQVDR 779
Query: 1134 KLVKQTVMTSVYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTN 955
KLVKQTVMTSVYGVTY+GARDQIKRRLKER +I DD+A+FAA+CYAARTTL AL +MF
Sbjct: 780 KLVKQTVMTSVYGVTYVGARDQIKRRLKERGNISDDSALFAAACYAARTTLTALGEMFEA 839
Query: 954 ARDIMKWLGDCAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKI 775
AR IM WLG+CAKVIASEN PVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDK+
Sbjct: 840 ARSIMSWLGECAKVIASENHPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKV 899
Query: 774 MVKRQKTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREK 595
MVKRQ+TAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVD+MNRILREK
Sbjct: 900 MVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREK 959
Query: 594 FVELYEAPILENLLESFEKTFPTLKFPALPGRGDFDLREVLESPYFFN 451
FVELY+APILENLLESF+++FP L FP LP RGDFDLR+VLESPYFF+
Sbjct: 960 FVELYKAPILENLLESFQESFPNLTFPPLPDRGDFDLRDVLESPYFFH 1007
>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|590698457|ref|XP_007045722.1| DNA-directed RNA
polymerase isoform 1 [Theobroma cacao]
gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 996
Score = 1496 bits (3872), Expect = 0.0
Identities = 754/999 (75%), Positives = 842/999 (84%), Gaps = 8/999 (0%)
Frame = -2
Query: 3423 RNLTKQAASRKIINFSYESQISSWFSSTAK-FSKDSTFLEKVRPFSG--NSRFTVL--GF 3259
R+L KQAA R+ F E S S +A FS+DS F KVR N + L GF
Sbjct: 3 RSLVKQAAYREKFKFVAEPYTCSLSSCSATGFSQDSVFANKVRASEARANGFYGCLFPGF 62
Query: 3258 SPNGPISSQIENLRKPSLLNSGKPFGVSGFCNGVKGYASVAEAIVSTDAEEESSGLDENH 3079
G SSQ ++L K SL G P SG +KGYAS AEA++ST EE+ SG +E H
Sbjct: 63 RQIGVFSSQKDDLGKFSLNQPGDPLRFSGKFWNLKGYASAAEAVIST--EEDMSGSEEIH 120
Query: 3078 HQDLLDEIERQNKVDSYLKKPKRMVAGVGISKYNSLRKKQIEIETEAWQEAAKEYRELLM 2899
+L++ + R+ K S+L +PK++ G+G++KYN+L+K+QI+IETEAW+EAAKEY+ELLM
Sbjct: 121 --ELMEAMAREEKKMSFLVQPKKVAEGMGVAKYNTLKKRQIKIETEAWEEAAKEYQELLM 178
Query: 2898 DMCEQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVI 2719
DMCE KLAPNLPY+KSLFLGWFEPLR++I +Q++C E + S+A Y + L ADMMAV+
Sbjct: 179 DMCEHKLAPNLPYIKSLFLGWFEPLRDSIVGEQELCKENC-RISHAAYFNELSADMMAVV 237
Query: 2718 TMHKLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTKKN-TIDNKPKGESA 2542
TMHKLMGLLMTN+ G G +RVVQAACQIGEA+EHE +I FL KTKK T D KP GES
Sbjct: 238 TMHKLMGLLMTNTAGTGGIRVVQAACQIGEAIEHEAKIQSFLGKTKKKKTTDKKPDGESE 297
Query: 2541 CVTNEQEKQIKDQQKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEAHVKIGSRLMQL 2362
VTN+QEK +KDQ+KLRKKVTQL+KKQKV QVR IVK D SK WGQEAHVK+G RL+QL
Sbjct: 298 PVTNKQEKLVKDQEKLRKKVTQLLKKQKVHQVRKIVKGHDTSKSWGQEAHVKVGCRLIQL 357
Query: 2361 LMETAYIQPPVDQLGDGPPDLRPAFVHTLKTV--ETPKGSRRYGVIECDPLVRKGLEKTA 2188
L+E AYIQPPVDQLGD PPD+RPAFVH+LKT+ + KGSRRYGVIECD LVRKGLEKTA
Sbjct: 358 LIENAYIQPPVDQLGDCPPDIRPAFVHSLKTITKDGNKGSRRYGVIECDLLVRKGLEKTA 417
Query: 2187 RHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKKQLDPIFEAL 2008
RHMVIPYMPMLVPP NWTGYD+GAYLFLPSYVMRTHGA+QQRE VKRTP+KQL+PIFEAL
Sbjct: 418 RHMVIPYMPMLVPPQNWTGYDRGAYLFLPSYVMRTHGAKQQRETVKRTPRKQLEPIFEAL 477
Query: 2007 DTLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEIRXXXXXXXX 1828
DTLGNTKWRINKRVLGV+DR+WA GGR A LVDR+DVPLPE+PDTEDEAEI+
Sbjct: 478 DTLGNTKWRINKRVLGVVDRLWANGGRVASLVDREDVPLPEKPDTEDEAEIQKWKWKVKA 537
Query: 1827 XXKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG 1648
K+NNER+S RCD+ELKLAVARKM+DE+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG
Sbjct: 538 ANKQNNERHSLRCDVELKLAVARKMRDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG 597
Query: 1647 ILEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFDSADRPLEGG 1468
+LEFAEGRPLGKSGLRWLKIHLANLY GGVDK SY+ R+ FTE HLDDIFDSADRPLEG
Sbjct: 598 VLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGR 657
Query: 1467 RWWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDTTGAA 1288
RWW AEDPFQCLAACINLSEALRS SPETTISHMPVHQDGSCNGLQHYAALGRD GAA
Sbjct: 658 RWWLSAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAA 717
Query: 1287 AVNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDRKLVKQTVMT 1108
+VNLV G +PADVYS IA RV +IM+ DAEKDPA NP+ALHARLLINQVDRKLVKQTVMT
Sbjct: 718 SVNLVAGEKPADVYSGIAARVVDIMRRDAEKDPAINPHALHARLLINQVDRKLVKQTVMT 777
Query: 1107 SVYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTNARDIMKWLG 928
SVYGVTYIGARDQIKRRLKER +I DD MF ASCYAARTTL AL +MF AR IM WLG
Sbjct: 778 SVYGVTYIGARDQIKRRLKERCAIADDTEMFVASCYAARTTLTALGEMFQAARSIMNWLG 837
Query: 927 DCAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKIMVKRQKTAF 748
+CAKVI+SENQPV+W TPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDK+M KRQ+TAF
Sbjct: 838 ECAKVISSENQPVRWVTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMAKRQRTAF 897
Query: 747 PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYEAPI 568
PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVD+MNRILREKFVELYEAPI
Sbjct: 898 PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPI 957
Query: 567 LENLLESFEKTFPTLKFPALPGRGDFDLREVLESPYFFN 451
LENLLESF+K+FP+L FP LP RGDFDLREVLESPYFFN
Sbjct: 958 LENLLESFQKSFPSLNFPPLPERGDFDLREVLESPYFFN 996
>ref|XP_012438460.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial isoform X1
[Gossypium raimondii] gi|763783438|gb|KJB50509.1|
hypothetical protein B456_008G174700 [Gossypium
raimondii]
Length = 996
Score = 1487 bits (3850), Expect = 0.0
Identities = 749/999 (74%), Positives = 841/999 (84%), Gaps = 8/999 (0%)
Frame = -2
Query: 3423 RNLTKQAASRKIINFSYESQISSWFSSTAK-FSKDSTFLEKVRPFS----GNSRFTVLGF 3259
R+L KQA+ F ES SS SS++ F + S F+ K RP G S +LGF
Sbjct: 3 RSLLKQASHTHKSKFVPESCTSSLSSSSSTGFCQTSAFINKFRPSKAINHGFSGCPILGF 62
Query: 3258 SPNGPISSQIENLRKPSLLNSGKPFGVSGFCNGVKGYASVAEAIVSTDAEEESSGLDENH 3079
N SQ + L + +SG P SG KGYAS AEAIVS E++ SG +E +
Sbjct: 63 RENYVFPSQKDCLGRFGFSHSGNPLTFSGKFWNFKGYASAAEAIVSN--EDDLSGSEEIN 120
Query: 3078 HQDLLDEIERQNKVDSYLKKPKRMVAGVGISKYNSLRKKQIEIETEAWQEAAKEYRELLM 2899
+L++ + ++ + +S+ K+PK MV G+G++KYN+L+++QI+IETEAW+EAAKEY+EL+
Sbjct: 121 --ELVEAMIKEERKESFSKQPKIMVGGMGVAKYNTLKRRQIKIETEAWEEAAKEYQELIA 178
Query: 2898 DMCEQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVI 2719
DMC+QKLAPNLPYVKSLFLGWFEPLR++IAA+Q++C + K S+A Y + L ADMMAV+
Sbjct: 179 DMCQQKLAPNLPYVKSLFLGWFEPLRDSIAAEQEVC-KGNFKISHAAYFNELSADMMAVV 237
Query: 2718 TMHKLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTKK-NTIDNKPKGESA 2542
TMHKLMGLLMTN+ G G +RVVQAACQIGEA+E+E RI +FLEKTKK NT D K ES
Sbjct: 238 TMHKLMGLLMTNTAGTGGIRVVQAACQIGEAIENEARIQKFLEKTKKKNTTDKKSVTESE 297
Query: 2541 CVTNEQEKQIKDQQKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEAHVKIGSRLMQL 2362
T EQ K K+++KLRKKVTQL+KKQKV QVR IVK +D SKPWGQEAHVK+G RL+QL
Sbjct: 298 PETTEQGKLAKNEEKLRKKVTQLMKKQKVHQVREIVKGRDTSKPWGQEAHVKVGCRLIQL 357
Query: 2361 LMETAYIQPPVDQLGDGPPDLRPAFVHTLKTV--ETPKGSRRYGVIECDPLVRKGLEKTA 2188
LME AYIQPPVDQ+GDGPPD+RPAFVH LK V + KGSRRYGVIECDPLVRKGLEKTA
Sbjct: 358 LMENAYIQPPVDQIGDGPPDIRPAFVHALKNVIKDGNKGSRRYGVIECDPLVRKGLEKTA 417
Query: 2187 RHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKKQLDPIFEAL 2008
+HMVIPYMPMLVPP NWTGYD+GAYLFLPSYVMRTHGA+QQRE VKRTP+KQL+P+FEAL
Sbjct: 418 KHMVIPYMPMLVPPQNWTGYDQGAYLFLPSYVMRTHGAKQQRETVKRTPRKQLEPVFEAL 477
Query: 2007 DTLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEIRXXXXXXXX 1828
DTLGNTKWRIN+R+LGV+DR+WA GGR ADLVDR+DVPLPEEPDTEDE EIR
Sbjct: 478 DTLGNTKWRINRRILGVVDRLWANGGRLADLVDREDVPLPEEPDTEDETEIRKWKWKVKA 537
Query: 1827 XXKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG 1648
KENNER+SQRCD+ELKLAVARKMKDE GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG
Sbjct: 538 VKKENNERHSQRCDVELKLAVARKMKDEVGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG 597
Query: 1647 ILEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFDSADRPLEGG 1468
+LEFAEGRPLGKSGLRWLKIHLANLY GGVDK SY+ RV+FTE HLDDIFDSADRPLEG
Sbjct: 598 VLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRVEFTESHLDDIFDSADRPLEGK 657
Query: 1467 RWWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDTTGAA 1288
RWW AEDPFQCLAACINLSEALRS PE TISHMPVHQDGSCNGLQHYAALGRD GAA
Sbjct: 658 RWWLSAEDPFQCLAACINLSEALRSSIPEATISHMPVHQDGSCNGLQHYAALGRDKLGAA 717
Query: 1287 AVNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDRKLVKQTVMT 1108
AVNLV G +PADVYS IA RV +IM+ DA++DPATNPNALHARLLINQVDRKLVKQTVMT
Sbjct: 718 AVNLVAGDKPADVYSGIAARVLDIMKRDAQEDPATNPNALHARLLINQVDRKLVKQTVMT 777
Query: 1107 SVYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTNARDIMKWLG 928
SVYGVTY+GARDQIKRRLKER +I DD +F ASCYAARTTL AL +MF AR IM WLG
Sbjct: 778 SVYGVTYVGARDQIKRRLKERGAIADDTQLFVASCYAARTTLTALGEMFQAARSIMGWLG 837
Query: 927 DCAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKIMVKRQKTAF 748
+CAKVIASENQPV+W TPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDK+MVKRQ+TAF
Sbjct: 838 ECAKVIASENQPVRWVTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAF 897
Query: 747 PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYEAPI 568
PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVD+MNRILREKFVELYEAPI
Sbjct: 898 PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPI 957
Query: 567 LENLLESFEKTFPTLKFPALPGRGDFDLREVLESPYFFN 451
LENLLESF+K FP+L FP LP RGDFDLREVLESPYFFN
Sbjct: 958 LENLLESFQKAFPSLNFPPLPERGDFDLREVLESPYFFN 996
>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like [Nelumbo nucifera]
Length = 1031
Score = 1474 bits (3815), Expect = 0.0
Identities = 736/999 (73%), Positives = 839/999 (83%), Gaps = 8/999 (0%)
Frame = -2
Query: 3423 RNLTKQAASRKIINFSYESQISSWFSSTAKFSKDSTFLEKVRPFSGNS----RFTVLGFS 3256
R++ ++A+ K+ S I F FS+DS + RPF S RF+ F
Sbjct: 42 RHIARRASLTKVRLSRDSSSILRTFGFMG-FSQDSILNDTTRPFELKSSMSFRFSERSFL 100
Query: 3255 PNGPISSQIENLRKPSLLNSGKPFGVSGFCNGVKGYASVAEAIVSTDAEEESSGLDENHH 3076
NG + S+ + L +P L P N KGYASVAEA+ S DAEE+ S +DE
Sbjct: 101 RNGELPSKEDELGRPILGCFRNPISPPRLSNHPKGYASVAEAVCSMDAEEDLSAIDEI-- 158
Query: 3075 QDLLDEIERQNKVDSYLKKPK--RMVAGVGISKYNSLRKKQIEIETEAWQEAAKEYRELL 2902
Q+LL+E+ ++ K + L+ K ++V G+G KY LR++Q++IETEAW++AAKEYRELL
Sbjct: 159 QELLEEMGKEEKKELELRDQKQIKLVGGMGQGKYLLLRRRQVKIETEAWEQAAKEYRELL 218
Query: 2901 MDMCEQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAV 2722
MDMCEQKLAPNLPY+KSLFLGWFEPLR+ I A+Q++C + KN+ +YAPY D LPA+MM+V
Sbjct: 219 MDMCEQKLAPNLPYMKSLFLGWFEPLRDCIVAEQELCRKGKNRTAYAPYFDQLPAEMMSV 278
Query: 2721 ITMHKLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTKKNTIDNKPKGESA 2542
ITMHKLMGLLMT G G+ RVVQAACQIGEA+E+EVRIH+FLEKT+K T D K +
Sbjct: 279 ITMHKLMGLLMTG-GEHGSCRVVQAACQIGEAIENEVRIHKFLEKTRKKT-DKDKKADGG 336
Query: 2541 CVTNEQEKQIKDQQKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEAHVKIGSRLMQL 2362
E + IK+QQ+LRKKVT L+KKQK++QVR IVK QDDSKPWGQ+A K+GSRL++L
Sbjct: 337 ----ESDPVIKEQQRLRKKVTDLMKKQKLQQVRQIVKGQDDSKPWGQDAQAKVGSRLIEL 392
Query: 2361 LMETAYIQPPVDQLGDGPPDLRPAFVHTLKTV--ETPKGSRRYGVIECDPLVRKGLEKTA 2188
LM+TAYIQPPVDQL DGPPD+RPAF H+LKTV E K SRRYGVIECDPLVRKGLE+TA
Sbjct: 393 LMQTAYIQPPVDQLADGPPDIRPAFRHSLKTVTKEAQKTSRRYGVIECDPLVRKGLERTA 452
Query: 2187 RHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKKQLDPIFEAL 2008
RHMVIPYMPMLVPP+NWTGYDKGAYLFLPSYVMRTHGARQQREAVKR P+KQL+P+FEAL
Sbjct: 453 RHMVIPYMPMLVPPVNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPRKQLEPVFEAL 512
Query: 2007 DTLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEIRXXXXXXXX 1828
DTLGNTKWR+NKRVL V+DRIWA GGR ADLVDR+DVP+PEEPDTEDEAEI+
Sbjct: 513 DTLGNTKWRVNKRVLSVVDRIWASGGRLADLVDREDVPIPEEPDTEDEAEIKKWKWKVKA 572
Query: 1827 XXKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG 1648
KEN+ER+SQRCDIELKLAVAR+MKDE+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRG
Sbjct: 573 AKKENSERHSQRCDIELKLAVARRMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRG 632
Query: 1647 ILEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFDSADRPLEGG 1468
ILEFAEGRPLGKSGL+WLKIHLANLY GGVDK SY+ R+ FTE HLDDIFDSADRPLEG
Sbjct: 633 ILEFAEGRPLGKSGLQWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGR 692
Query: 1467 RWWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDTTGAA 1288
RWW +AEDPFQCLAACINLSEALRS SPETTISHMPVHQDGSCNGLQHYAALGRD GAA
Sbjct: 693 RWWLNAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAA 752
Query: 1287 AVNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDRKLVKQTVMT 1108
AVNLV G +PADVYS IA RV +IM+ DAEKDP T+PNA+HAR+LINQVDRKLVKQTVMT
Sbjct: 753 AVNLVAGEKPADVYSGIAARVLDIMRRDAEKDPETHPNAMHARILINQVDRKLVKQTVMT 812
Query: 1107 SVYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTNARDIMKWLG 928
SVYGVTYIGARDQIKRRLKERN I DD+ +F ASCYAA+TTL AL +MF AR IM WLG
Sbjct: 813 SVYGVTYIGARDQIKRRLKERNVIADDSELFGASCYAAKTTLTALGEMFEAARSIMSWLG 872
Query: 927 DCAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKIMVKRQKTAF 748
DCAK+IASENQPV+WTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQRETDK+MVKRQ+TAF
Sbjct: 873 DCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAF 932
Query: 747 PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYEAPI 568
PPNFVHSLDGSHMMMTAVAC+KAGLNFAGVHDSYWTHACD+D+MN+ILREKFVELYE PI
Sbjct: 933 PPNFVHSLDGSHMMMTAVACRKAGLNFAGVHDSYWTHACDIDEMNKILREKFVELYEKPI 992
Query: 567 LENLLESFEKTFPTLKFPALPGRGDFDLREVLESPYFFN 451
LENLLESF+++FPTL FP LP RGDFDLREVL+SPYFFN
Sbjct: 993 LENLLESFQQSFPTLNFPPLPERGDFDLREVLDSPYFFN 1031
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 1463 bits (3787), Expect = 0.0
Identities = 744/1001 (74%), Positives = 826/1001 (82%), Gaps = 10/1001 (0%)
Frame = -2
Query: 3423 RNLTKQAASRKIINFSYESQISS-------WFSSTAKFSKDSTFLEKVRPFSGNSRFTVL 3265
RNL K A +R++ S S S +F A+ + + +RP +G R VL
Sbjct: 3 RNLAKHAYTRRLQLSSQHSSFSPSNCTSRFYFPDKARALESQDHVNSLRPVAGLRRIGVL 62
Query: 3264 GFSPNGPISSQIENLRKPSLLNSGKPFGVSGFCNGVKGYASVAEAIVSTDAEEESSGLDE 3085
F Q + L +P + P G KGYAS AEAI S EE+ SG+DE
Sbjct: 63 SF--------QQDELGRPGFGVTKTPVNFFGLFGYQKGYASAAEAIAS---EEDMSGVDE 111
Query: 3084 NHHQDLLDEIERQNKVDSYLKKPKRMVAGVGISKYNSLRKKQIEIETEAWQEAAKEYREL 2905
Q+L++E+ NK D K+PK ++ GV K+N LR++QI++ETEAW+EAAKEYREL
Sbjct: 112 V--QELVEEV---NKGDKLEKQPK-LIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYREL 165
Query: 2904 LMDMCEQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMA 2725
L DMCEQKLAPNLPY+KSLFLGWFEPLR+ IAA+Q +C + KN+ +YAPY DHLPADMMA
Sbjct: 166 LSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMA 225
Query: 2724 VITMHKLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTKKNTID-NKPKGE 2548
VITMHKLMGLLMT G G+ RVVQAAC IGEA+EHEVRI RF+EKTKK + N P G
Sbjct: 226 VITMHKLMGLLMTGEGN-GSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGG 284
Query: 2547 SACVTNEQEKQIKDQQKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEAHVKIGSRLM 2368
S VT EQEK LRKKV+ L+KKQK++QVR IVK QDDSKPWGQ+A+VK+GSRL+
Sbjct: 285 SNPVTKEQEK-------LRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLI 337
Query: 2367 QLLMETAYIQPPVDQLGDGPPDLRPAFVHTLKTV--ETPKGSRRYGVIECDPLVRKGLEK 2194
+LL+ETAYIQPP DQLGDGPPD+RPAFVHTLKTV ET KG+RRYGVIECDPLVRKGLEK
Sbjct: 338 ELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEK 397
Query: 2193 TARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKKQLDPIFE 2014
TARHMVIPYMPMLVPP+NWTGYDKGAYLFLPSYVMR HGARQQREA+KR P+K L+P FE
Sbjct: 398 TARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFE 457
Query: 2013 ALDTLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEIRXXXXXX 1834
AL+TLGNTKWRINKRVLGVIDRIWA GGR ADLVDR+DVPLPEEPDTEDEAEIR
Sbjct: 458 ALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKV 517
Query: 1833 XXXXKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLC 1654
KEN+ER+SQRCDIELKLAVARKMKDE+GF+YPHNLDFRGRAYPMHPYLNHLGSDLC
Sbjct: 518 RSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLC 577
Query: 1653 RGILEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFDSADRPLE 1474
RGILEFAEGRPLGKSGLRWLKIHLAN+Y GGVDK SY+ RV FTE HL+DIFDSADRPLE
Sbjct: 578 RGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLE 637
Query: 1473 GGRWWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDTTG 1294
G RWW AEDPFQCLA CINLSEALRS SPETTISHMPVHQDGSCNGLQHYAALGRD G
Sbjct: 638 GRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLG 697
Query: 1293 AAAVNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDRKLVKQTV 1114
AAAVNLV G +PADVYS IA RV +IMQ DA+KDPAT PNAL ARLLI+QVDRKLVKQTV
Sbjct: 698 AAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTV 757
Query: 1113 MTSVYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTNARDIMKW 934
MTSVYGVTYIGARDQIKRRLKER +I D+ +F+ASCYAA+TTL AL +MF AR IM W
Sbjct: 758 MTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSW 817
Query: 933 LGDCAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKIMVKRQKT 754
LGDCAKVIASEN PV+W TPLGLPVVQPYR+LGRHLIKTSLQVL+LQRETDK+MVKRQ+T
Sbjct: 818 LGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRT 877
Query: 753 AFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYEA 574
AFPPNFVHSLDGSHMMMTAVAC+KAGLNFAGVHDSYWTHACDVD+MNRILREKFVELY
Sbjct: 878 AFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGM 937
Query: 573 PILENLLESFEKTFPTLKFPALPGRGDFDLREVLESPYFFN 451
PILENLLE F+K+FPTL FP LP RGDFDLREVLESPYFFN
Sbjct: 938 PILENLLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 978
>ref|XP_012438461.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial isoform X2
[Gossypium raimondii] gi|763783439|gb|KJB50510.1|
hypothetical protein B456_008G174700 [Gossypium
raimondii]
Length = 987
Score = 1461 bits (3783), Expect = 0.0
Identities = 741/999 (74%), Positives = 833/999 (83%), Gaps = 8/999 (0%)
Frame = -2
Query: 3423 RNLTKQAASRKIINFSYESQISSWFSSTAK-FSKDSTFLEKVRPFS----GNSRFTVLGF 3259
R+L KQA+ F ES SS SS++ F + S F+ K RP G S +LGF
Sbjct: 3 RSLLKQASHTHKSKFVPESCTSSLSSSSSTGFCQTSAFINKFRPSKAINHGFSGCPILGF 62
Query: 3258 SPNGPISSQIENLRKPSLLNSGKPFGVSGFCNGVKGYASVAEAIVSTDAEEESSGLDENH 3079
N SQ + L + +SG P SG KGYAS AEAIVS E++ SG +E +
Sbjct: 63 RENYVFPSQKDCLGRFGFSHSGNPLTFSGKFWNFKGYASAAEAIVSN--EDDLSGSEEIN 120
Query: 3078 HQDLLDEIERQNKVDSYLKKPKRMVAGVGISKYNSLRKKQIEIETEAWQEAAKEYRELLM 2899
+L++ + ++ + +S+ K+PK MV G+G++KYN+L+++QI+IETEAW+EAAKEY+EL+
Sbjct: 121 --ELVEAMIKEERKESFSKQPKIMVGGMGVAKYNTLKRRQIKIETEAWEEAAKEYQELIA 178
Query: 2898 DMCEQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVI 2719
DMC+QKLAPNLPYVKSLFLGWFEPLR++IAA+Q++C + K S+A Y + L ADMMAV+
Sbjct: 179 DMCQQKLAPNLPYVKSLFLGWFEPLRDSIAAEQEVC-KGNFKISHAAYFNELSADMMAVV 237
Query: 2718 TMHKLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTKK-NTIDNKPKGESA 2542
TMHKLMGLLMTN+ G G +RVVQAACQIGEA+E+E RI +FLEKTKK NT D K ES
Sbjct: 238 TMHKLMGLLMTNTAGTGGIRVVQAACQIGEAIENEARIQKFLEKTKKKNTTDKKSVTESE 297
Query: 2541 CVTNEQEKQIKDQQKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEAHVKIGSRLMQL 2362
T EQ K K+++KLRKKVTQL+KKQKV QVR IVK +D SKPWGQEAHVK+G RL+QL
Sbjct: 298 PETTEQGKLAKNEEKLRKKVTQLMKKQKVHQVREIVKGRDTSKPWGQEAHVKVGCRLIQL 357
Query: 2361 LMETAYIQPPVDQLGDGPPDLRPAFVHTLKTV--ETPKGSRRYGVIECDPLVRKGLEKTA 2188
LME AYIQPPVDQ+GDGPPD+RPAFVH LK V + KGSRRYGVIECDPLVRKGLEKTA
Sbjct: 358 LMENAYIQPPVDQIGDGPPDIRPAFVHALKNVIKDGNKGSRRYGVIECDPLVRKGLEKTA 417
Query: 2187 RHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKKQLDPIFEAL 2008
+HMVIPYMPM YD+GAYLFLPSYVMRTHGA+QQRE VKRTP+KQL+P+FEAL
Sbjct: 418 KHMVIPYMPM---------YDQGAYLFLPSYVMRTHGAKQQRETVKRTPRKQLEPVFEAL 468
Query: 2007 DTLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEIRXXXXXXXX 1828
DTLGNTKWRIN+R+LGV+DR+WA GGR ADLVDR+DVPLPEEPDTEDE EIR
Sbjct: 469 DTLGNTKWRINRRILGVVDRLWANGGRLADLVDREDVPLPEEPDTEDETEIRKWKWKVKA 528
Query: 1827 XXKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG 1648
KENNER+SQRCD+ELKLAVARKMKDE GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG
Sbjct: 529 VKKENNERHSQRCDVELKLAVARKMKDEVGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG 588
Query: 1647 ILEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFDSADRPLEGG 1468
+LEFAEGRPLGKSGLRWLKIHLANLY GGVDK SY+ RV+FTE HLDDIFDSADRPLEG
Sbjct: 589 VLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRVEFTESHLDDIFDSADRPLEGK 648
Query: 1467 RWWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDTTGAA 1288
RWW AEDPFQCLAACINLSEALRS PE TISHMPVHQDGSCNGLQHYAALGRD GAA
Sbjct: 649 RWWLSAEDPFQCLAACINLSEALRSSIPEATISHMPVHQDGSCNGLQHYAALGRDKLGAA 708
Query: 1287 AVNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDRKLVKQTVMT 1108
AVNLV G +PADVYS IA RV +IM+ DA++DPATNPNALHARLLINQVDRKLVKQTVMT
Sbjct: 709 AVNLVAGDKPADVYSGIAARVLDIMKRDAQEDPATNPNALHARLLINQVDRKLVKQTVMT 768
Query: 1107 SVYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTNARDIMKWLG 928
SVYGVTY+GARDQIKRRLKER +I DD +F ASCYAARTTL AL +MF AR IM WLG
Sbjct: 769 SVYGVTYVGARDQIKRRLKERGAIADDTQLFVASCYAARTTLTALGEMFQAARSIMGWLG 828
Query: 927 DCAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKIMVKRQKTAF 748
+CAKVIASENQPV+W TPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDK+MVKRQ+TAF
Sbjct: 829 ECAKVIASENQPVRWVTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAF 888
Query: 747 PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYEAPI 568
PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVD+MNRILREKFVELYEAPI
Sbjct: 889 PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPI 948
Query: 567 LENLLESFEKTFPTLKFPALPGRGDFDLREVLESPYFFN 451
LENLLESF+K FP+L FP LP RGDFDLREVLESPYFFN
Sbjct: 949 LENLLESFQKAFPSLNFPPLPERGDFDLREVLESPYFFN 987
>ref|XP_012573866.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
X2 [Cicer arietinum]
Length = 1002
Score = 1443 bits (3736), Expect = 0.0
Identities = 731/1005 (72%), Positives = 831/1005 (82%), Gaps = 15/1005 (1%)
Frame = -2
Query: 3420 NLTKQAASRKIINFSYESQISSWFSSTAKFSKDSTFLEKVRPFSG--NSRFTVLGFSPNG 3247
N+ K+A+S+K N SY ISS SS+ +FS+ S F EK+ P + NSR GFS
Sbjct: 4 NIVKRASSKKF-NLSYS--ISSSSSSSLRFSQHSNFPEKILPQTRIINSRHPFFGFSQVS 60
Query: 3246 PISSQIENLRKPSLLNSGKPFGVSGFCNG-VKGYASVAEAIVSTDAEEESSGLDENHHQD 3070
+S+ L + +L S PF S +GY SVAEAI S+D E++ SG +E Q
Sbjct: 61 IFNSE-NKLGRSNLSFSEDPFTFSSTSVAHFRGYGSVAEAIESSDTEDDHSGCEEV--QK 117
Query: 3069 LLDEIERQNKVDSYLKKPKRMVAGVGIS-KYNSLRKKQIEIETEAWQEAAKEYRELLMDM 2893
LL+E+ ++ K L+ K G S KY L+++QI+IETEAW+EAA+EY+ELL DM
Sbjct: 118 LLEEMVKEEKKKPELENQKNNSGGGMASYKYKMLKRRQIKIETEAWEEAAREYQELLEDM 177
Query: 2892 CEQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVITM 2713
EQKLAPNLPY+KSLFLGWFEPL+NAIA DQ++C + +++ S++PY + LP DMMAVITM
Sbjct: 178 REQKLAPNLPYMKSLFLGWFEPLKNAIADDQELCKDYRHRASHSPYFNELPPDMMAVITM 237
Query: 2712 HKLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTK-KNTIDNKPKGESACV 2536
HKLMGLLMTNS G+G+ RV+QAACQIGEA+EHE +I+RF+EKTK K T K GES
Sbjct: 238 HKLMGLLMTNSNGVGSARVIQAACQIGEAIEHEGKIYRFMEKTKGKKTTTGKSAGESVLA 297
Query: 2535 --------TNEQEKQIKDQQKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEAHVKIG 2380
E+EK K+Q +LR+KV LIKKQK +Q GIV+ +D+ KPWGQEA VK+G
Sbjct: 298 PVKIDEMTAEEKEKFKKEQTRLRRKVASLIKKQKTQQAMGIVRGRDEGKPWGQEAQVKVG 357
Query: 2379 SRLMQLLMETAYIQPPVDQLGDGPPDLRPAFVHTLKTV--ETPKGSRRYGVIECDPLVRK 2206
SRL+QLL+ETAY+QPP +Q GD PPD+ PAF HTLKTV ++ GS+RYGVIECDPL++K
Sbjct: 358 SRLVQLLIETAYLQPPANQFGDSPPDIYPAFKHTLKTVSADSNNGSKRYGVIECDPLIQK 417
Query: 2205 GLEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKKQLD 2026
GLEKTARHMVIPYMPMLVPP NWTGYDKGAYLFLPSYVMR HGA+QQREAVKR PK QL
Sbjct: 418 GLEKTARHMVIPYMPMLVPPTNWTGYDKGAYLFLPSYVMRIHGAKQQREAVKRAPKNQLK 477
Query: 2025 PIFEALDTLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEIRXX 1846
P+FEAL+TLG+TKWR+NK VLGVID+IWA GGR ADLVDRDD PLPEEPDTEDEAEIR
Sbjct: 478 PVFEALNTLGDTKWRVNKSVLGVIDQIWANGGRLADLVDRDDTPLPEEPDTEDEAEIRKW 537
Query: 1845 XXXXXXXXKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLG 1666
KEN+ER+SQRCDIELKLAVARKMK+EEGFYYPHNLDFRGRAYPMHPYLNHLG
Sbjct: 538 KWKVKSVKKENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPYLNHLG 597
Query: 1665 SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFDSAD 1486
SDLCRGILEFAEGRPLGKSG++WLKIHLANLYGGGVDK YD R+ FTE HLDDIFDSAD
Sbjct: 598 SDLCRGILEFAEGRPLGKSGMQWLKIHLANLYGGGVDKLCYDGRIAFTEDHLDDIFDSAD 657
Query: 1485 RPLEGGRWWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGR 1306
RPLEG RWW AEDPFQCLAACINLSEALRS +PETT+SHMPVHQDGSCNGLQHYAALGR
Sbjct: 658 RPLEGKRWWLQAEDPFQCLAACINLSEALRSDTPETTLSHMPVHQDGSCNGLQHYAALGR 717
Query: 1305 DTTGAAAVNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDRKLV 1126
D GAAAVNLVGG +PADVYS IA RV EIM++DA KDP TNP+ALHAR LI+QVDRKLV
Sbjct: 718 DKLGAAAVNLVGGDQPADVYSGIAARVLEIMKSDALKDPKTNPHALHARRLISQVDRKLV 777
Query: 1125 KQTVMTSVYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTNARD 946
KQTVMTSVYGVTYIGARDQIKRRLKER +IEDD+ +FAASCYAA+TTL ALE+MF AR
Sbjct: 778 KQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDSELFAASCYAAKTTLTALEEMFEAARS 837
Query: 945 IMKWLGDCAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKIMVK 766
IM WLGDCAKVIAS NQ V+W TPLGLPVVQPYR++GRHLIKTSLQVLTLQRETDK+MVK
Sbjct: 838 IMSWLGDCAKVIASTNQAVRWVTPLGLPVVQPYREIGRHLIKTSLQVLTLQRETDKVMVK 897
Query: 765 RQKTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREKFVE 586
RQ+TAFPPNFVHSLDGSHMMMTAVACKKAG++FAGVHDSYWTHACDVD+MNRILREKFVE
Sbjct: 898 RQRTAFPPNFVHSLDGSHMMMTAVACKKAGMSFAGVHDSYWTHACDVDEMNRILREKFVE 957
Query: 585 LYEAPILENLLESFEKTFPTLKFPALPGRGDFDLREVLESPYFFN 451
LYEAPILENLLE FEKTFPTLKFP LP RGDFDLR+VLESPYFFN
Sbjct: 958 LYEAPILENLLEDFEKTFPTLKFPPLPERGDFDLRQVLESPYFFN 1002
>ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like isoform X1 [Nelumbo
nucifera]
Length = 990
Score = 1439 bits (3726), Expect = 0.0
Identities = 718/998 (71%), Positives = 831/998 (83%), Gaps = 7/998 (0%)
Frame = -2
Query: 3423 RNLTKQAASRKIINFSYESQISSWFSSTAKFSKDSTFLEKVRPF----SGNSRFTVLGFS 3256
RN+ KQA S + S + ++ +S+ F +K R F S N+ F+ F
Sbjct: 3 RNIVKQACSTNFFSRDSSSMLRTF--GVVGYSQYPVFHDKARQFEFKSSINAGFSESCFL 60
Query: 3255 PNGPISSQIENLRKPSLLNSGKPFGVSGFCNGVKGYASVAEAIVSTDAEEESSGLDENHH 3076
NG S+ ++L S G+S F N KGYASVAE + STDAEE+ S +DE
Sbjct: 61 RNGESPSKEDDLGILSFGCFRNSMGLSRFSNHPKGYASVAEVLSSTDAEEDVSVVDEI-- 118
Query: 3075 QDLLDEIERQNK-VDSYLKKPKRMVAGVGISKYNSLRKKQIEIETEAWQEAAKEYRELLM 2899
Q+LL+E+ ++ K ++ +K ++V G+G KY LR++Q++IETEAW++AAKEY+ELLM
Sbjct: 119 QELLEEMSKEEKELEFSHQKQTKLVGGMGQGKYLLLRRRQVKIETEAWEQAAKEYKELLM 178
Query: 2898 DMCEQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVI 2719
DMCEQKLAPNLPY+KSLFLGWFEPLR+ IAA+Q++C + KN+ +YAPY D LPA+MM+VI
Sbjct: 179 DMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQELCRKGKNRAAYAPYFDQLPAEMMSVI 238
Query: 2718 TMHKLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTKKNTIDNKPKGESAC 2539
TMHKL+GLLMT G G+ RVVQAAC IG+A+E+EVRI++FLEKTKK T D K E
Sbjct: 239 TMHKLVGLLMTG-GEHGSARVVQAACLIGQAIENEVRIYKFLEKTKKKT-DKDKKAEGG- 295
Query: 2538 VTNEQEKQIKDQQKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEAHVKIGSRLMQLL 2359
E + IK+QQ+LRKKVT L+KKQK++QVR IVK QDDSKPWGQ+A K+GS L++LL
Sbjct: 296 ---ESDPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQDDSKPWGQDAQAKVGSHLIELL 352
Query: 2358 METAYIQPPVDQLGDGPPDLRPAFVHTLKTV--ETPKGSRRYGVIECDPLVRKGLEKTAR 2185
M+TAYIQ P DQL DGPPD+RPAF HTLKT+ E+ K SRRYG+IECDPLVRKGLE+TAR
Sbjct: 353 MQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQKTSRRYGLIECDPLVRKGLERTAR 412
Query: 2184 HMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKKQLDPIFEALD 2005
HMVIPYMPMLVPP+NWTGYDKGAYLFLPSYVMRTHGARQQREAVKRT +KQL+PIFEALD
Sbjct: 413 HMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTSRKQLEPIFEALD 472
Query: 2004 TLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEIRXXXXXXXXX 1825
TLGNTKWRINKRVLGV+DRIWA GGR ADLVDR+DVPLPEEP+TEDEAE++
Sbjct: 473 TLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEEPETEDEAELKKWKWKVKAV 532
Query: 1824 XKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 1645
KEN+ER+SQRCD ELKLAVAR+MKDE GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGI
Sbjct: 533 KKENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 592
Query: 1644 LEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFDSADRPLEGGR 1465
LEFAEGRPLGKSGLRWLKIHLANLY GGVDK SY+ R+ FTE HLDDIFDSADRPLEG R
Sbjct: 593 LEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRR 652
Query: 1464 WWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDTTGAAA 1285
WW +A+DPFQCLA CINLSEALRS SPET ISH+P+HQDGSCNGLQHYAALGRD GAAA
Sbjct: 653 WWLNADDPFQCLAVCINLSEALRSCSPETMISHIPIHQDGSCNGLQHYAALGRDKLGAAA 712
Query: 1284 VNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDRKLVKQTVMTS 1105
VNLV G +PADVYS +A RV +IM+ DA+KDP T PNA+HARLLINQVDRKLVKQTVMTS
Sbjct: 713 VNLVAGDKPADVYSGVAARVLDIMRRDAQKDPTTEPNAMHARLLINQVDRKLVKQTVMTS 772
Query: 1104 VYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTNARDIMKWLGD 925
VYGVTYIGARDQIKRRLKERN+I D++ +F ASCYAA+TT+ AL +MF AR IM WLGD
Sbjct: 773 VYGVTYIGARDQIKRRLKERNAIADESELFGASCYAAKTTITALGEMFKAARSIMSWLGD 832
Query: 924 CAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKIMVKRQKTAFP 745
CAK+IASENQPV+WTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQRETDK+MVKRQ+TAFP
Sbjct: 833 CAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFP 892
Query: 744 PNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYEAPIL 565
PNF+HSLDGSHMMMTAVACK+AGLNFAGVHDS+WTHACDVD+MN+ILREKFVELYE PI+
Sbjct: 893 PNFIHSLDGSHMMMTAVACKRAGLNFAGVHDSFWTHACDVDEMNKILREKFVELYETPIM 952
Query: 564 ENLLESFEKTFPTLKFPALPGRGDFDLREVLESPYFFN 451
ENLLESF+++FP L FP LP GDFDL EVL SPYFFN
Sbjct: 953 ENLLESFQQSFPALSFPPLPECGDFDLHEVLVSPYFFN 990
>ref|XP_004509767.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
X1 [Cicer arietinum]
Length = 1002
Score = 1439 bits (3726), Expect = 0.0
Identities = 730/1005 (72%), Positives = 830/1005 (82%), Gaps = 15/1005 (1%)
Frame = -2
Query: 3420 NLTKQAASRKIINFSYESQISSWFSSTAKFSKDSTFLEKVRPFSG--NSRFTVLGFSPNG 3247
N+ K+A+S+K N SY ISS SS+ +FS+ S F EK+ P + NSR GFS
Sbjct: 4 NIVKRASSKKF-NLSYS--ISSSSSSSLRFSQHSNFPEKILPQTRIINSRHPFFGFSQVS 60
Query: 3246 PISSQIENLRKPSLLNSGKPFGVSGFCNG-VKGYASVAEAIVSTDAEEESSGLDENHHQD 3070
+S+ L + +L S PF S +GY SVAEAI S+D E++ SG +E Q
Sbjct: 61 IFNSE-NKLGRSNLSFSEDPFTFSSTSVAHFRGYGSVAEAIESSDTEDDHSGCEEV--QK 117
Query: 3069 LLDEIERQNKVDSYLKKPKRMVAGVGIS-KYNSLRKKQIEIETEAWQEAAKEYRELLMDM 2893
LL+E+ ++ K L+ K G S KY L+++QI+IETEAW+EAA+EY+ELL DM
Sbjct: 118 LLEEMVKEEKKKPELENQKNNSGGGMASYKYKMLKRRQIKIETEAWEEAAREYQELLEDM 177
Query: 2892 CEQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVITM 2713
EQKLAPNLPY+KSLFLGWFEPL+NAIA DQ++C + +++ S++PY + LP DMMAVITM
Sbjct: 178 REQKLAPNLPYMKSLFLGWFEPLKNAIADDQELCKDYRHRASHSPYFNELPPDMMAVITM 237
Query: 2712 HKLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTK-KNTIDNKPKGESACV 2536
HKLMGLLMTNS G+G+ RV+QAACQIGEA+EHE +I+RF+EKTK K T K GES
Sbjct: 238 HKLMGLLMTNSNGVGSARVIQAACQIGEAIEHEGKIYRFMEKTKGKKTTTGKSAGESVLA 297
Query: 2535 --------TNEQEKQIKDQQKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEAHVKIG 2380
E+EK K+Q +LR+KV LIKKQK +Q GIV+ +D+ KPWGQEA VK+G
Sbjct: 298 PVKIDEMTAEEKEKFKKEQTRLRRKVASLIKKQKTQQAMGIVRGRDEGKPWGQEAQVKVG 357
Query: 2379 SRLMQLLMETAYIQPPVDQLGDGPPDLRPAFVHTLKTV--ETPKGSRRYGVIECDPLVRK 2206
SRL+QLL+ETAY+QPP +Q GD PPD+ PAF HTLKTV ++ GS+RYGVIECDPL++K
Sbjct: 358 SRLVQLLIETAYLQPPANQFGDSPPDIYPAFKHTLKTVSADSNNGSKRYGVIECDPLIQK 417
Query: 2205 GLEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKKQLD 2026
GLEKTARHMVIPYMPMLVPP NWTG DKGAYLFLPSYVMR HGA+QQREAVKR PK QL
Sbjct: 418 GLEKTARHMVIPYMPMLVPPTNWTGDDKGAYLFLPSYVMRIHGAKQQREAVKRAPKNQLK 477
Query: 2025 PIFEALDTLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEIRXX 1846
P+FEAL+TLG+TKWR+NK VLGVID+IWA GGR ADLVDRDD PLPEEPDTEDEAEIR
Sbjct: 478 PVFEALNTLGDTKWRVNKSVLGVIDQIWANGGRLADLVDRDDTPLPEEPDTEDEAEIRKW 537
Query: 1845 XXXXXXXXKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLG 1666
KEN+ER+SQRCDIELKLAVARKMK+EEGFYYPHNLDFRGRAYPMHPYLNHLG
Sbjct: 538 KWKVKSVKKENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPYLNHLG 597
Query: 1665 SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFDSAD 1486
SDLCRGILEFAEGRPLGKSG++WLKIHLANLYGGGVDK YD R+ FTE HLDDIFDSAD
Sbjct: 598 SDLCRGILEFAEGRPLGKSGMQWLKIHLANLYGGGVDKLCYDGRIAFTEDHLDDIFDSAD 657
Query: 1485 RPLEGGRWWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGR 1306
RPLEG RWW AEDPFQCLAACINLSEALRS +PETT+SHMPVHQDGSCNGLQHYAALGR
Sbjct: 658 RPLEGKRWWLQAEDPFQCLAACINLSEALRSDTPETTLSHMPVHQDGSCNGLQHYAALGR 717
Query: 1305 DTTGAAAVNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDRKLV 1126
D GAAAVNLVGG +PADVYS IA RV EIM++DA KDP TNP+ALHAR LI+QVDRKLV
Sbjct: 718 DKLGAAAVNLVGGDQPADVYSGIAARVLEIMKSDALKDPKTNPHALHARRLISQVDRKLV 777
Query: 1125 KQTVMTSVYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTNARD 946
KQTVMTSVYGVTYIGARDQIKRRLKER +IEDD+ +FAASCYAA+TTL ALE+MF AR
Sbjct: 778 KQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDSELFAASCYAAKTTLTALEEMFEAARS 837
Query: 945 IMKWLGDCAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKIMVK 766
IM WLGDCAKVIAS NQ V+W TPLGLPVVQPYR++GRHLIKTSLQVLTLQRETDK+MVK
Sbjct: 838 IMSWLGDCAKVIASTNQAVRWVTPLGLPVVQPYREIGRHLIKTSLQVLTLQRETDKVMVK 897
Query: 765 RQKTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREKFVE 586
RQ+TAFPPNFVHSLDGSHMMMTAVACKKAG++FAGVHDSYWTHACDVD+MNRILREKFVE
Sbjct: 898 RQRTAFPPNFVHSLDGSHMMMTAVACKKAGMSFAGVHDSYWTHACDVDEMNRILREKFVE 957
Query: 585 LYEAPILENLLESFEKTFPTLKFPALPGRGDFDLREVLESPYFFN 451
LYEAPILENLLE FEKTFPTLKFP LP RGDFDLR+VLESPYFFN
Sbjct: 958 LYEAPILENLLEDFEKTFPTLKFPPLPERGDFDLRQVLESPYFFN 1002
>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
DNA-directed RNA polymerase 2, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
Length = 997
Score = 1438 bits (3722), Expect = 0.0
Identities = 715/998 (71%), Positives = 828/998 (82%), Gaps = 20/998 (2%)
Frame = -2
Query: 3384 NFSYESQISS----WFSSTAKFSKDSTFLEKVRPFSGN----SRFTVLGFSPNGPISSQI 3229
NF+ + +SS + S + ++D L+KVR S ++ LG +SSQ
Sbjct: 4 NFARRTSLSSKKLNFSSDCTQLNQDLDILQKVRHPEAQTLLCSPYSFLGSRRISGLSSQN 63
Query: 3228 ENLRKPSLLNSGKPFGVSGFCNGVKGYASVAEAIVSTDAEEESSGLDENHHQDLLDEIER 3049
KPS N PFG S F KGYA+ A ++++ E + SG DE Q ++EI +
Sbjct: 64 HEFIKPSFTNLTNPFGFSHFL--FKGYATAAAQVIASTDESDFSGCDELQEQ--IEEINK 119
Query: 3048 QNK-VDSYLKKP------KRMVAGVGISKYNSLRKKQIEIETEAWQEAAKEYRELLMDMC 2890
+K +D++ ++ K+ +AG+GI KY L+K+QI++ETEAW+EAA+EY+ELL DMC
Sbjct: 120 HHKKMDAHFRQQQQQQQRKKTIAGMGIGKYTILKKRQIKMETEAWEEAAREYQELLTDMC 179
Query: 2889 EQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVITMH 2710
EQKLAPNLPY+KSLFLGWFEPLR+AIA +Q++ E+ NK S+ PY D LPADMMAVITMH
Sbjct: 180 EQKLAPNLPYIKSLFLGWFEPLRDAIAKEQELSREKNNKLSHGPYFDALPADMMAVITMH 239
Query: 2709 KLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTKK---NTIDNKPKGESAC 2539
KLMGLLMT +GG G+VRVVQAAC +GEA+EHE RIHRFLEKTKK +T + +P+G+
Sbjct: 240 KLMGLLMTTNGGNGSVRVVQAACAVGEAIEHEARIHRFLEKTKKKKKSTKNEEPEGKLEP 299
Query: 2538 VTNEQEKQIKDQQKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEAHVKIGSRLMQLL 2359
VT++ EK K+Q+KLRKKVT+L+KKQKV+QVRG+ K DDS PWGQEA VK+G RL+QLL
Sbjct: 300 VTSDAEKLAKEQEKLRKKVTELMKKQKVQQVRGLTKGHDDSMPWGQEAQVKVGCRLIQLL 359
Query: 2358 METAYIQPPVDQLGDGPPDLRPAFVHTLKTV--ETPKGSRRYGVIECDPLVRKGLEKTAR 2185
+ETAYIQPPV+QLGDG PD+RPAF+HTLK V +T K SRRYGVIECDP+VR GLEK+AR
Sbjct: 360 IETAYIQPPVNQLGDGLPDIRPAFMHTLKNVMKDTQKTSRRYGVIECDPIVRNGLEKSAR 419
Query: 2184 HMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKKQLDPIFEALD 2005
HMVIPYMPMLVPP+NW GYD+GAYLFLPSYVMRTHGA+QQR AVKRTP KQL+P++EAL+
Sbjct: 420 HMVIPYMPMLVPPLNWEGYDQGAYLFLPSYVMRTHGAKQQRNAVKRTPWKQLEPVYEALN 479
Query: 2004 TLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEIRXXXXXXXXX 1825
TLGNTKWRINK++L V+DRIWA GGR A L+DR+D PLPEE +TEDE EI+
Sbjct: 480 TLGNTKWRINKKILTVVDRIWANGGRLAGLIDREDEPLPEELETEDENEIKKWKWKVKNV 539
Query: 1824 XKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 1645
KEN+ER+SQRCDIELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHLGSD+CRGI
Sbjct: 540 KKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGI 599
Query: 1644 LEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFDSADRPLEGGR 1465
LEFAEGRPLGKSG RWLKIHLAN+Y GGVDK SY+ RV FTE HLD IFDSADRPLEG R
Sbjct: 600 LEFAEGRPLGKSGFRWLKIHLANVYAGGVDKLSYEGRVAFTENHLDYIFDSADRPLEGRR 659
Query: 1464 WWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDTTGAAA 1285
WW AEDPFQCLA C NL+EA RS SPETTISHMP+HQDGSCNGLQHYAALGRD GAAA
Sbjct: 660 WWLGAEDPFQCLATCFNLAEAFRSSSPETTISHMPIHQDGSCNGLQHYAALGRDKLGAAA 719
Query: 1284 VNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDRKLVKQTVMTS 1105
VNLV G +PADVYS IA RV +IM+ DAEKDP TNPNALHA+LLIN+VDRKLVKQTVMTS
Sbjct: 720 VNLVSGEKPADVYSGIAARVLDIMRTDAEKDPGTNPNALHAKLLINEVDRKLVKQTVMTS 779
Query: 1104 VYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTNARDIMKWLGD 925
VYGVTYIGARDQIKRRLKER+++ DD +++AASCYAA+TTL ALE+MF AR IM WLG+
Sbjct: 780 VYGVTYIGARDQIKRRLKERDAVADDPSLYAASCYAAKTTLMALEEMFEGARSIMAWLGE 839
Query: 924 CAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKIMVKRQKTAFP 745
CAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQ+L LQ+ETDKIMVKRQ+TAFP
Sbjct: 840 CAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQMLALQKETDKIMVKRQRTAFP 899
Query: 744 PNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYEAPIL 565
PNFVHSLDGSHMMMTAVACK AGLNFAGVHDSYWTHACDVD+MNRILRE FVELYEAPIL
Sbjct: 900 PNFVHSLDGSHMMMTAVACKHAGLNFAGVHDSYWTHACDVDEMNRILRENFVELYEAPIL 959
Query: 564 ENLLESFEKTFPTLKFPALPGRGDFDLREVLESPYFFN 451
ENLLE F+K+FP LKFP LP RGDFDLR+VLESPYFFN
Sbjct: 960 ENLLEGFQKSFPKLKFPPLPDRGDFDLRDVLESPYFFN 997
>gb|KJB50511.1| hypothetical protein B456_008G174700 [Gossypium raimondii]
Length = 964
Score = 1426 bits (3692), Expect = 0.0
Identities = 719/965 (74%), Positives = 811/965 (84%), Gaps = 8/965 (0%)
Frame = -2
Query: 3423 RNLTKQAASRKIINFSYESQISSWFSSTAK-FSKDSTFLEKVRPFS----GNSRFTVLGF 3259
R+L KQA+ F ES SS SS++ F + S F+ K RP G S +LGF
Sbjct: 3 RSLLKQASHTHKSKFVPESCTSSLSSSSSTGFCQTSAFINKFRPSKAINHGFSGCPILGF 62
Query: 3258 SPNGPISSQIENLRKPSLLNSGKPFGVSGFCNGVKGYASVAEAIVSTDAEEESSGLDENH 3079
N SQ + L + +SG P SG KGYAS AEAIVS E++ SG +E +
Sbjct: 63 RENYVFPSQKDCLGRFGFSHSGNPLTFSGKFWNFKGYASAAEAIVSN--EDDLSGSEEIN 120
Query: 3078 HQDLLDEIERQNKVDSYLKKPKRMVAGVGISKYNSLRKKQIEIETEAWQEAAKEYRELLM 2899
+L++ + ++ + +S+ K+PK MV G+G++KYN+L+++QI+IETEAW+EAAKEY+EL+
Sbjct: 121 --ELVEAMIKEERKESFSKQPKIMVGGMGVAKYNTLKRRQIKIETEAWEEAAKEYQELIA 178
Query: 2898 DMCEQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVI 2719
DMC+QKLAPNLPYVKSLFLGWFEPLR++IAA+Q++C + K S+A Y + L ADMMAV+
Sbjct: 179 DMCQQKLAPNLPYVKSLFLGWFEPLRDSIAAEQEVC-KGNFKISHAAYFNELSADMMAVV 237
Query: 2718 TMHKLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTKK-NTIDNKPKGESA 2542
TMHKLMGLLMTN+ G G +RVVQAACQIGEA+E+E RI +FLEKTKK NT D K ES
Sbjct: 238 TMHKLMGLLMTNTAGTGGIRVVQAACQIGEAIENEARIQKFLEKTKKKNTTDKKSVTESE 297
Query: 2541 CVTNEQEKQIKDQQKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEAHVKIGSRLMQL 2362
T EQ K K+++KLRKKVTQL+KKQKV QVR IVK +D SKPWGQEAHVK+G RL+QL
Sbjct: 298 PETTEQGKLAKNEEKLRKKVTQLMKKQKVHQVREIVKGRDTSKPWGQEAHVKVGCRLIQL 357
Query: 2361 LMETAYIQPPVDQLGDGPPDLRPAFVHTLKTV--ETPKGSRRYGVIECDPLVRKGLEKTA 2188
LME AYIQPPVDQ+GDGPPD+RPAFVH LK V + KGSRRYGVIECDPLVRKGLEKTA
Sbjct: 358 LMENAYIQPPVDQIGDGPPDIRPAFVHALKNVIKDGNKGSRRYGVIECDPLVRKGLEKTA 417
Query: 2187 RHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKKQLDPIFEAL 2008
+HMVIPYMPMLVPP NWTGYD+GAYLFLPSYVMRTHGA+QQRE VKRTP+KQL+P+FEAL
Sbjct: 418 KHMVIPYMPMLVPPQNWTGYDQGAYLFLPSYVMRTHGAKQQRETVKRTPRKQLEPVFEAL 477
Query: 2007 DTLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEIRXXXXXXXX 1828
DTLGNTKWRIN+R+LGV+DR+WA GGR ADLVDR+DVPLPEEPDTEDE EIR
Sbjct: 478 DTLGNTKWRINRRILGVVDRLWANGGRLADLVDREDVPLPEEPDTEDETEIRKWKWKVKA 537
Query: 1827 XXKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG 1648
KENNER+SQRCD+ELKLAVARKMKDE GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG
Sbjct: 538 VKKENNERHSQRCDVELKLAVARKMKDEVGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG 597
Query: 1647 ILEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFDSADRPLEGG 1468
+LEFAEGRPLGKSGLRWLKIHLANLY GGVDK SY+ RV+FTE HLDDIFDSADRPLEG
Sbjct: 598 VLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRVEFTESHLDDIFDSADRPLEGK 657
Query: 1467 RWWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDTTGAA 1288
RWW AEDPFQCLAACINLSEALRS PE TISHMPVHQDGSCNGLQHYAALGRD GAA
Sbjct: 658 RWWLSAEDPFQCLAACINLSEALRSSIPEATISHMPVHQDGSCNGLQHYAALGRDKLGAA 717
Query: 1287 AVNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDRKLVKQTVMT 1108
AVNLV G +PADVYS IA RV +IM+ DA++DPATNPNALHARLLINQVDRKLVKQTVMT
Sbjct: 718 AVNLVAGDKPADVYSGIAARVLDIMKRDAQEDPATNPNALHARLLINQVDRKLVKQTVMT 777
Query: 1107 SVYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTNARDIMKWLG 928
SVYGVTY+GARDQIKRRLKER +I DD +F ASCYAARTTL AL +MF AR IM WLG
Sbjct: 778 SVYGVTYVGARDQIKRRLKERGAIADDTQLFVASCYAARTTLTALGEMFQAARSIMGWLG 837
Query: 927 DCAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKIMVKRQKTAF 748
+CAKVIASENQPV+W TPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDK+MVKRQ+TAF
Sbjct: 838 ECAKVIASENQPVRWVTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAF 897
Query: 747 PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYEAPI 568
PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVD+MNRILREKFVELYEAPI
Sbjct: 898 PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPI 957
Query: 567 LENLL 553
LEN++
Sbjct: 958 LENVM 962
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
tuberosum]
Length = 993
Score = 1422 bits (3681), Expect = 0.0
Identities = 711/1008 (70%), Positives = 832/1008 (82%), Gaps = 17/1008 (1%)
Frame = -2
Query: 3423 RNLTKQAASRKIINFSYESQISSWFSSTAKFSKDSTFLEKV--RPFSGNSRFTVLGFSPN 3250
R ++KQA SRK+ N +++S + S K E++ P G S+ ++ F+
Sbjct: 3 RYISKQAYSRKLRN-THDSDFLGFAQSFGKTRPLQGLCEEIYRNPNLGVSQSSI--FTRV 59
Query: 3249 GPISSQIENLRKPSLLNSGKPFGVSGFCNGVKG-------------YASVAEAIVSTDAE 3109
S ++ + + S N F S + VKG Y S AEAI ST E
Sbjct: 60 NGKSRCLDGMCEDSCRNHYLGFSESSIFSRVKGDFRVCGSLGILRSYGSAAEAIASTSEE 119
Query: 3108 EESSGLDENHHQDLLDEIERQNKVDSYLKKPK--RMVAGVGISKYNSLRKKQIEIETEAW 2935
+ +DE Q+L++E+ ++N+ +PK + V G+GI KYN LR++QI++ETEAW
Sbjct: 120 D----IDEI--QELIEEMNKENEALKTNLQPKQPKTVGGMGIGKYNLLRRRQIKVETEAW 173
Query: 2934 QEAAKEYRELLMDMCEQKLAPNLPYVKSLFLGWFEPLRNAIAADQKMCNERKNKPSYAPY 2755
++AAKEY+ELLMDMCEQKLAPNLPY+KSLFLGWFEPLR+AIAA+QK+C+E KN+ +YAP+
Sbjct: 174 EDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPF 233
Query: 2754 LDHLPADMMAVITMHKLMGLLMTNSGGIGNVRVVQAACQIGEALEHEVRIHRFLEKTKKN 2575
D LPA+MMAVITMHKLMGLLMT GG G+ RVVQAA IGEA+EHE RIHRFLEKTKKN
Sbjct: 234 FDQLPAEMMAVITMHKLMGLLMTG-GGSGSARVVQAASHIGEAIEHEARIHRFLEKTKKN 292
Query: 2574 TIDNKPKGESACVTNEQEKQIKDQQKLRKKVTQLIKKQKVKQVRGIVKEQDDSKPWGQEA 2395
+D + + + +K++++LRKKV L+KKQK++QVR IVK+QDD KPWGQ+
Sbjct: 293 ALDGSLEETAGDI-------MKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDN 345
Query: 2394 HVKIGSRLMQLLMETAYIQPPVDQLGDGPPDLRPAFVHTLKTVETPKGSRRYGVIECDPL 2215
VK+G +L+Q+L+ETAYIQPP DQL D PPD+RPAF+HTLKTVET KGSRRYGVI+CDPL
Sbjct: 346 LVKVGCKLIQILIETAYIQPPNDQLDDCPPDIRPAFMHTLKTVETVKGSRRYGVIQCDPL 405
Query: 2214 VRKGLEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTPKK 2035
VRKGL+KTARHMVIPYMPMLVPP NW+GYD+GAYLFLPSY+MRTHGA+QQREAVKR PKK
Sbjct: 406 VRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPKK 465
Query: 2034 QLDPIFEALDTLGNTKWRINKRVLGVIDRIWAGGGRTADLVDRDDVPLPEEPDTEDEAEI 1855
QL+P+F+ALDTLGNTKWR+NKRVLG++DRIWA GGR ADLVDR+DVPLPEEPDTEDE EI
Sbjct: 466 QLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVPLPEEPDTEDEEEI 525
Query: 1854 RXXXXXXXXXXKENNERNSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLN 1675
+ KEN ER+SQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLN
Sbjct: 526 KKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLN 585
Query: 1674 HLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVDKASYDHRVDFTEKHLDDIFD 1495
HLGSDLCRGILEF+EGRPLGKSGLRWLKIHLAN+YGGGVDK SY+ R F+E H++DIFD
Sbjct: 586 HLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRAAFSENHVEDIFD 645
Query: 1494 SADRPLEGGRWWTHAEDPFQCLAACINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAA 1315
SADRPLEG RWW AEDPFQCLA CIN+SEALRSPSPET+ISHMP+HQDGSCNGLQHYAA
Sbjct: 646 SADRPLEGRRWWLGAEDPFQCLATCINISEALRSPSPETSISHMPIHQDGSCNGLQHYAA 705
Query: 1314 LGRDTTGAAAVNLVGGGEPADVYSEIANRVKEIMQNDAEKDPATNPNALHARLLINQVDR 1135
LGRD GAAAVNLV G +PADVYS IA RV +IM+ DA+KDPAT+PN + ARLLINQVDR
Sbjct: 706 LGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMRARLLINQVDR 765
Query: 1134 KLVKQTVMTSVYGVTYIGARDQIKRRLKERNSIEDDAAMFAASCYAARTTLAALEQMFTN 955
KLVKQTVMTSVYGVTYIGARDQIKRRLKER +IEDD +F+A+CYAA+TTL AL +MF
Sbjct: 766 KLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFSAACYAAKTTLTALGEMFEA 825
Query: 954 ARDIMKWLGDCAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKI 775
AR IM WLGDCAK+IA ENQPV+WTTPLGLPVVQPYR+LGRHLIKTSLQ+LTLQRETDK+
Sbjct: 826 ARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKV 885
Query: 774 MVKRQKTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDKMNRILREK 595
MVKRQ+TAFPPNFVHSLDGSHMMMTA+ CK+AGL+FAGVHDSYWTHA DVD+MN+ILREK
Sbjct: 886 MVKRQRTAFPPNFVHSLDGSHMMMTAITCKEAGLSFAGVHDSYWTHASDVDQMNKILREK 945
Query: 594 FVELYEAPILENLLESFEKTFPTLKFPALPGRGDFDLREVLESPYFFN 451
FVELY+APILENLLESF+++FP L+FP LP RGDFDLREVLESPYFFN
Sbjct: 946 FVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993
>ref|XP_011021147.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Populus euphratica]
Length = 988
Score = 1421 bits (3679), Expect = 0.0
Identities = 712/977 (72%), Positives = 817/977 (83%), Gaps = 11/977 (1%)
Frame = -2
Query: 3348 SSTAKFSKDSTFLEKVRPFSGN----SRFTVLGFSPNGPISSQIENLRKPSLLNSGKPFG 3181
S+++ F KDSTF+E +R S F+ L G + Q + L S + KPF
Sbjct: 18 SNSSNFFKDSTFIENIRSPDAKKCLKSAFSFLCSRQIG-VFPQNDKLCNSSFGDLTKPFD 76
Query: 3180 VSGFCNGVKGYASVAEA-IVSTDAEEESSGLDENHHQDLLDEIER--QNKVDSYLKKPKR 3010
+S F KGYA+ A A ++ ++ E + SG D+ Q L++++ + Q + + K+
Sbjct: 77 LSPFF--FKGYATAAAADVIPSNDESDLSGSDD--FQGLMEQVNKHFQKMEPQFRPQEKK 132
Query: 3009 MVAGVGISKYNSLRKKQIEIETEAWQEAAKEYRELLMDMCEQKLAPNLPYVKSLFLGWFE 2830
MVAG+GI KY L+++QI++ETEAW++AA+EY+E+L DMCEQKLAPNLPYVKSLFLGWFE
Sbjct: 133 MVAGMGIGKYAILKRRQIKMETEAWEQAAQEYQEMLEDMCEQKLAPNLPYVKSLFLGWFE 192
Query: 2829 PLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVITMHKLMGLLMTNSGGIGNVRVVQ 2650
PLR+AI A+Q++C +R + S+ + + LPADMMAVITMHKLMGLLMT +GG ++RVVQ
Sbjct: 193 PLRDAIVAEQELC-KRNLRVSHRAHFNDLPADMMAVITMHKLMGLLMTGNGGSASIRVVQ 251
Query: 2649 AACQIGEALEHEVRIHRFLEKTKK--NTIDNKPKGESACVTNEQEKQIKDQQKLRKKVTQ 2476
AA +GEA+EHE RIH+FLEKTKK N D +GES E EK K+Q+KLRKKVT
Sbjct: 252 AASVVGEAIEHEGRIHKFLEKTKKRKNVEDKISEGESDAAIEEGEKLNKEQEKLRKKVTT 311
Query: 2475 LIKKQKVKQVRGIVKEQDDSKPWGQEAHVKIGSRLMQLLMETAYIQPPVDQLGDGPPDLR 2296
LIKKQKV+QVR IVK DDS+PWGQE HVK+GSRL+QL++ETAYIQPP+DQ+GDGPPD+R
Sbjct: 312 LIKKQKVQQVRRIVKGHDDSRPWGQEEHVKVGSRLIQLMIETAYIQPPIDQIGDGPPDIR 371
Query: 2295 PAFVHTLKTV--ETPKGSRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPINWTGYDK 2122
PAFVHTLKT+ +T K SRRYGVIECDPLVRKGLEK+ARHMVIPYMPMLVPP+NWTGYD+
Sbjct: 372 PAFVHTLKTITKDTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQ 431
Query: 2121 GAYLFLPSYVMRTHGARQQREAVKRTPKKQLDPIFEALDTLGNTKWRINKRVLGVIDRIW 1942
GA+LFLPSYVMR HG++QQR+AVKR + QL+P+F+ALDTLGNTKWRINKRVL V+DRIW
Sbjct: 432 GAHLFLPSYVMRIHGSKQQRDAVKRASRNQLEPVFKALDTLGNTKWRINKRVLLVVDRIW 491
Query: 1941 AGGGRTADLVDRDDVPLPEEPDTEDEAEIRXXXXXXXXXXKENNERNSQRCDIELKLAVA 1762
A GG A LVDR+D PLPEEP TEDEAEIR KEN+ER+SQRCDIELKLAVA
Sbjct: 492 ASGGHLAGLVDREDAPLPEEPQTEDEAEIRKWTWKVRSVKKENSERHSQRCDIELKLAVA 551
Query: 1761 RKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHL 1582
RKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD+CRGILEFAEGRPLGKSGLRWLKIHL
Sbjct: 552 RKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHL 611
Query: 1581 ANLYGGGVDKASYDHRVDFTEKHLDDIFDSADRPLEGGRWWTHAEDPFQCLAACINLSEA 1402
ANLY GGVDK SYD R+ FTE HLDDIFDSAD+PLEG RWW AEDPFQCLAACINLSEA
Sbjct: 612 ANLYAGGVDKLSYDGRISFTENHLDDIFDSADQPLEGRRWWLGAEDPFQCLAACINLSEA 671
Query: 1401 LRSPSPETTISHMPVHQDGSCNGLQHYAALGRDTTGAAAVNLVGGGEPADVYSEIANRVK 1222
LRSPSPET SH PVHQDGSCNGLQHYAALGRD GAAAVNLVGG +PADVYS IA RV
Sbjct: 672 LRSPSPETATSHTPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGEKPADVYSGIATRVL 731
Query: 1221 EIMQNDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERN 1042
+IMQ DAEKDPA NPN++HA+LL+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER
Sbjct: 732 DIMQRDAEKDPAINPNSVHAKLLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERC 791
Query: 1041 SIEDDAAMFAASCYAARTTLAALEQMFTNARDIMKWLGDCAKVIASENQPVQWTTPLGLP 862
I DD +++A+CYAA+TTL ALE+MF AR IM WLG+CAKVIASENQPVQWTTPLGLP
Sbjct: 792 IIADDPQLYSAACYAAKTTLMALEEMFEGARGIMAWLGECAKVIASENQPVQWTTPLGLP 851
Query: 861 VVQPYRQLGRHLIKTSLQVLTLQRETDKIMVKRQKTAFPPNFVHSLDGSHMMMTAVACKK 682
VVQPYRQLGRHLIKTSLQVLTL+RETDK+MVKRQ+TAFPPNFVHSLDGSHMMMTAVACK+
Sbjct: 852 VVQPYRQLGRHLIKTSLQVLTLKRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKE 911
Query: 681 AGLNFAGVHDSYWTHACDVDKMNRILREKFVELYEAPILENLLESFEKTFPTLKFPALPG 502
AGLNFAGVHDSYWTHACDVD+MNRILREKFVELYEAPILENLLESF+ +FP LKFP LP
Sbjct: 912 AGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQSSFPNLKFPPLPE 971
Query: 501 RGDFDLREVLESPYFFN 451
RG FDL++VL S YFFN
Sbjct: 972 RGVFDLKDVLRSTYFFN 988
>ref|XP_012080481.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Jatropha
curcas] gi|643721154|gb|KDP31418.1| hypothetical protein
JCGZ_11794 [Jatropha curcas]
Length = 990
Score = 1420 bits (3677), Expect = 0.0
Identities = 715/979 (73%), Positives = 821/979 (83%), Gaps = 13/979 (1%)
Frame = -2
Query: 3348 SSTAKFSKDSTFLEKVRPFS----GNSRFTVLGFSPNGPISSQIENLRKPSLLNSGKPFG 3181
S+ K + S F+EK+RP NS ++ L FS +SS + L K S N P G
Sbjct: 19 SNLTKPYQVSNFIEKIRPLEIPTFFNSPYSPLYFSRMLVLSSPSDELSK-SFTNFRNPLG 77
Query: 3180 VSGFCNGVKGYASVA-EAIVSTDAEEESSGLDENHHQDLLDEIERQNKVDSYLKKP--KR 3010
+S +K YA+ A ++I+STD E + SG DE Q ++EI + ++ +P K+
Sbjct: 78 LSP--PFLKSYATAAAQSILSTD-ESDFSGSDELQEQ--IEEINKHHQKMEMQFRPQQKK 132
Query: 3009 MVAGVGISKYNSLRKKQIEIETEAWQEAAKEYRELLMDMCEQKLAPNLPYVKSLFLGWFE 2830
+AG+G+ KY L+++Q+++ETEAW+EAAKEY+ELL DMCEQKLAPNLPYVKSLFLGWFE
Sbjct: 133 TIAGMGVGKYTILKRRQVKMETEAWEEAAKEYQELLEDMCEQKLAPNLPYVKSLFLGWFE 192
Query: 2829 PLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVITMHKLMGLLMTNSGGIGNVRVVQ 2650
PLR+AIAA+Q++C E+ KPS+ PY D LPADMMAVITMHKLMGLLMT +GG G+VRVVQ
Sbjct: 193 PLRDAIAAEQELCMEKLGKPSHRPYFDALPADMMAVITMHKLMGLLMTTNGGNGSVRVVQ 252
Query: 2649 AACQIGEALEHEVRIHRFLEKTKKNTIDNKPKGESAC----VTNEQEKQIKDQQKLRKKV 2482
AAC +GEA+E E RIHRFLEKTKK K K ES C VT E+ K K+Q+KLR+K+
Sbjct: 253 AACAVGEAIEQEARIHRFLEKTKKKKKSTKDK-ESECNSEPVTVEEHKLAKEQEKLRRKI 311
Query: 2481 TQLIKKQKVKQVRGIVKEQDDSKPWGQEAHVKIGSRLMQLLMETAYIQPPVDQLGDGPPD 2302
T+L+KKQKV QVRG+VK D S PWGQEAHVK+G RL+QLL+ETAYIQPPVDQ GDG P+
Sbjct: 312 TELMKKQKVHQVRGLVKVFDHSMPWGQEAHVKVGCRLIQLLIETAYIQPPVDQFGDGLPN 371
Query: 2301 LRPAFVHTLKTV--ETPKGSRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPINWTGY 2128
+RPAF+HTLKT+ ++ K SRRYGVIECDPLV GLEK+ARHMVIPYMPMLVPP+NWTGY
Sbjct: 372 IRPAFMHTLKTIVKDSQKTSRRYGVIECDPLVHSGLEKSARHMVIPYMPMLVPPLNWTGY 431
Query: 2127 DKGAYLFLPSYVMRTHGARQQREAVKRTPKKQLDPIFEALDTLGNTKWRINKRVLGVIDR 1948
D+GAYLFLPSYVMRTHGA+QQRE V+RTP++QL P+FEALDTLGNTKWR+NK+VL V+DR
Sbjct: 432 DQGAYLFLPSYVMRTHGAKQQREVVRRTPRQQLQPVFEALDTLGNTKWRVNKKVLAVVDR 491
Query: 1947 IWAGGGRTADLVDRDDVPLPEEPDTEDEAEIRXXXXXXXXXXKENNERNSQRCDIELKLA 1768
IWA GG A LVDR+DVPLPEEP+T DEAEIR KEN+ER+SQRCDIELKLA
Sbjct: 492 IWANGGDLAGLVDREDVPLPEEPETVDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLA 551
Query: 1767 VARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKI 1588
VARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSGL WLKI
Sbjct: 552 VARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLCWLKI 611
Query: 1587 HLANLYGGGVDKASYDHRVDFTEKHLDDIFDSADRPLEGGRWWTHAEDPFQCLAACINLS 1408
HLAN+Y GGVDK S + R+ FTE HLDDIFDSADRPLEG RWW AEDPFQCLA CI+LS
Sbjct: 612 HLANVYAGGVDKLSNEGRIAFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLATCISLS 671
Query: 1407 EALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDTTGAAAVNLVGGGEPADVYSEIANR 1228
EALRS SPET ISH+PVHQDGSCNGLQHYAALGRD GAAAVNLV G +PADVYS IA R
Sbjct: 672 EALRSSSPETAISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVHGEKPADVYSGIAAR 731
Query: 1227 VKEIMQNDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 1048
V +IM++DAEKDP+TNPNALHA+ LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE
Sbjct: 732 VLDIMKSDAEKDPSTNPNALHAKRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 791
Query: 1047 RNSIEDDAAMFAASCYAARTTLAALEQMFTNARDIMKWLGDCAKVIASENQPVQWTTPLG 868
R +I++DAA FAA+ YAA+ TL ALE+MF AR IM WLG+CAKVIASENQPV+WTTPLG
Sbjct: 792 RGAIDNDAASFAAASYAAKITLTALEEMFEGARGIMAWLGECAKVIASENQPVRWTTPLG 851
Query: 867 LPVVQPYRQLGRHLIKTSLQVLTLQRETDKIMVKRQKTAFPPNFVHSLDGSHMMMTAVAC 688
LPVVQPY+QLGRHLIKTSLQ L LQRETDK+MVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 852 LPVVQPYKQLGRHLIKTSLQTLALQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTALAC 911
Query: 687 KKAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYEAPILENLLESFEKTFPTLKFPAL 508
K+AGLNFAGVHDSYWTHACDVD+MNRILR+KFVELYEAPILENLLE F+KTFP LKFP L
Sbjct: 912 KQAGLNFAGVHDSYWTHACDVDEMNRILRQKFVELYEAPILENLLEGFQKTFPKLKFPPL 971
Query: 507 PGRGDFDLREVLESPYFFN 451
P RGDFDLR+VL+SPYFFN
Sbjct: 972 PERGDFDLRDVLDSPYFFN 990
>ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa]
gi|550332836|gb|EEE88785.2| hypothetical protein
POPTR_0008s11200g [Populus trichocarpa]
Length = 988
Score = 1419 bits (3674), Expect = 0.0
Identities = 711/977 (72%), Positives = 816/977 (83%), Gaps = 11/977 (1%)
Frame = -2
Query: 3348 SSTAKFSKDSTFLEKVRPFSG----NSRFTVLGFSPNGPISSQIENLRKPSLLNSGKPFG 3181
S+++ F KDSTF+E +R NS F+ L G + Q + L S + KPF
Sbjct: 18 SNSSNFFKDSTFIENIRSPDAKKCLNSAFSFLCSRQIG-VFPQNDKLCNSSFGDLTKPFD 76
Query: 3180 VSGFCNGVKGYASVAEA-IVSTDAEEESSGLDENHHQDLLDEIER--QNKVDSYLKKPKR 3010
+S F KGYA+ A A ++ ++ E + SG D+ Q L++++ + Q + + K+
Sbjct: 77 LSPFF--FKGYATAAAADVIPSNDESDLSGSDD--FQGLMEQVNKHFQKMEPQFRPQEKK 132
Query: 3009 MVAGVGISKYNSLRKKQIEIETEAWQEAAKEYRELLMDMCEQKLAPNLPYVKSLFLGWFE 2830
MVAG+GI KY L+++QI++ETEAW++AA+EY+E+L DMCEQKLAPNLPYVKSLFLGWFE
Sbjct: 133 MVAGMGIGKYAILKRRQIKMETEAWEQAAQEYQEMLEDMCEQKLAPNLPYVKSLFLGWFE 192
Query: 2829 PLRNAIAADQKMCNERKNKPSYAPYLDHLPADMMAVITMHKLMGLLMTNSGGIGNVRVVQ 2650
PLR+AI A+Q++C +R + S+ + LPADMMAVITMHKLMGLLMT +GG ++RVVQ
Sbjct: 193 PLRDAIVAEQELC-KRNLRVSHRAHFSDLPADMMAVITMHKLMGLLMTGNGGSASIRVVQ 251
Query: 2649 AACQIGEALEHEVRIHRFLEKTKK--NTIDNKPKGESACVTNEQEKQIKDQQKLRKKVTQ 2476
AA +GEA+EHE RIH+FLEKTKK N +GES E EK K+Q+KLRKKVT
Sbjct: 252 AASVVGEAIEHEGRIHKFLEKTKKRKNVEAKISEGESDAAIEEGEKLSKEQEKLRKKVTT 311
Query: 2475 LIKKQKVKQVRGIVKEQDDSKPWGQEAHVKIGSRLMQLLMETAYIQPPVDQLGDGPPDLR 2296
LIKKQKV+QVR IVK DDS+PWGQE HVK+GSRL+QL++ETAYIQPP+DQ+GDGPPD+R
Sbjct: 312 LIKKQKVQQVRRIVKGHDDSRPWGQEEHVKVGSRLIQLMIETAYIQPPIDQIGDGPPDIR 371
Query: 2295 PAFVHTLKTV--ETPKGSRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPINWTGYDK 2122
PAFVHTLKT+ +T K SRRYGVIECDPLVRKGLEK+ARHMVIPYMPMLVPP+NWTGYD+
Sbjct: 372 PAFVHTLKTITKDTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQ 431
Query: 2121 GAYLFLPSYVMRTHGARQQREAVKRTPKKQLDPIFEALDTLGNTKWRINKRVLGVIDRIW 1942
GA+LFLPSYVMR HG++QQR+AVKR + QL+P+F+ALDTLGNTKWRINKRVL V+DRIW
Sbjct: 432 GAHLFLPSYVMRIHGSKQQRDAVKRASRNQLEPVFKALDTLGNTKWRINKRVLVVVDRIW 491
Query: 1941 AGGGRTADLVDRDDVPLPEEPDTEDEAEIRXXXXXXXXXXKENNERNSQRCDIELKLAVA 1762
A GG A LVDR+D PLPEEP TEDEAEIR KEN+ER+SQRCDIELKLAVA
Sbjct: 492 ASGGHLAGLVDREDAPLPEEPQTEDEAEIRKWTWKVRSVKKENSERHSQRCDIELKLAVA 551
Query: 1761 RKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHL 1582
RKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSD+CRGILEFAEGRPLGKSGLRWLKIHL
Sbjct: 552 RKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHL 611
Query: 1581 ANLYGGGVDKASYDHRVDFTEKHLDDIFDSADRPLEGGRWWTHAEDPFQCLAACINLSEA 1402
ANLY GGVDK SYD R+ FTE HLDDIFDSAD+PLEG RWW AEDPFQCLAACINLSEA
Sbjct: 612 ANLYAGGVDKLSYDGRISFTENHLDDIFDSADQPLEGRRWWLGAEDPFQCLAACINLSEA 671
Query: 1401 LRSPSPETTISHMPVHQDGSCNGLQHYAALGRDTTGAAAVNLVGGGEPADVYSEIANRVK 1222
LRSPSPET SH PVHQDGSCNGLQHYAALGRD GAAAVNLVGG +PADVYS IA RV
Sbjct: 672 LRSPSPETATSHTPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGEKPADVYSGIATRVL 731
Query: 1221 EIMQNDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERN 1042
+IMQ DAEKDPA NPN++HA+LL+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER
Sbjct: 732 DIMQRDAEKDPAINPNSVHAKLLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERC 791
Query: 1041 SIEDDAAMFAASCYAARTTLAALEQMFTNARDIMKWLGDCAKVIASENQPVQWTTPLGLP 862
I DD +++A+CYAA+TTL ALE+MF AR IM WLG+CAKVIASENQPV+WTTPLGLP
Sbjct: 792 IIADDPQLYSAACYAAKTTLMALEEMFEGARGIMAWLGECAKVIASENQPVRWTTPLGLP 851
Query: 861 VVQPYRQLGRHLIKTSLQVLTLQRETDKIMVKRQKTAFPPNFVHSLDGSHMMMTAVACKK 682
VVQPYRQLGRHLIKTSLQVLTL+RETDK+MVKRQ+TAFPPNFVHSLDGSHMMMTAVACK+
Sbjct: 852 VVQPYRQLGRHLIKTSLQVLTLKRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKE 911
Query: 681 AGLNFAGVHDSYWTHACDVDKMNRILREKFVELYEAPILENLLESFEKTFPTLKFPALPG 502
AGLNFAGVHDSYWTHACDVD+MNRILREKFVELYEAPILENLLESF+ +FP LKFP LP
Sbjct: 912 AGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQSSFPNLKFPPLPE 971
Query: 501 RGDFDLREVLESPYFFN 451
RG FDL++VL S YFFN
Sbjct: 972 RGVFDLKDVLRSTYFFN 988