BLASTX nr result

ID: Ziziphus21_contig00003356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00003356
         (526 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523078.1| conserved hypothetical protein [Ricinus comm...    61   3e-07
ref|XP_010106376.1| Pre-mRNA-splicing factor SF2 [Morus notabili...    61   4e-07

>ref|XP_002523078.1| conserved hypothetical protein [Ricinus communis]
           gi|223537640|gb|EEF39263.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 62

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 33/44 (75%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = +1

Query: 40  GDLDLERDLQKFQKQPI*IPHVPL-TKFDPRSLMPLPRQSYQIQ 168
           GDLDLERDLQKFQKQP    H  L   F PR+LMPLPRQSYQIQ
Sbjct: 10  GDLDLERDLQKFQKQPKFKIHTFLFNNFHPRALMPLPRQSYQIQ 53


>ref|XP_010106376.1| Pre-mRNA-splicing factor SF2 [Morus notabilis]
           gi|587922920|gb|EXC10292.1| Pre-mRNA-splicing factor SF2
           [Morus notabilis]
          Length = 389

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -1

Query: 526 DWGQRSSWITI*ELDNCVLSAIGIWKSPSICSRD 425
           DW QR SWI I ELDNCVLSAIGIWKSPS CSRD
Sbjct: 299 DWEQRRSWIAIVELDNCVLSAIGIWKSPS-CSRD 331


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