BLASTX nr result

ID: Ziziphus21_contig00002481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00002481
         (259 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009367671.1| PREDICTED: ribosome-recycling factor, chloro...    70   5e-10
ref|XP_009367642.1| PREDICTED: ribosome-recycling factor, chloro...    70   5e-10
ref|XP_008350057.1| PREDICTED: ribosome-recycling factor, chloro...    67   7e-09
ref|XP_008368934.1| PREDICTED: ribosome-recycling factor, chloro...    64   6e-08
ref|XP_008235289.1| PREDICTED: ribosome-recycling factor, chloro...    60   6e-07
ref|XP_004290648.1| PREDICTED: ribosome-recycling factor, chloro...    56   9e-06

>ref|XP_009367671.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Pyrus x
           bretschneideri] gi|694383421|ref|XP_009367672.1|
           PREDICTED: ribosome-recycling factor, chloroplastic-like
           [Pyrus x bretschneideri]
          Length = 341

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
 Frame = -2

Query: 255 MATSFSSATSLRSILQPKQKP---LISFRESYGGGGFCAKCQPXXXXXXXXXXXXXXXSL 85
           MAT FS AT +R +LQPKQ P   L+S R+S+GGG  C KCQP                 
Sbjct: 61  MATHFSPATPVRFVLQPKQNPPKTLLSIRDSFGGGSACKKCQPRTVNVCSWSSSANYVRS 120

Query: 84  QDGTAKLSCSGTLILPRRLLQKRGSIVR 1
           QDG A+LS    +++ ++L QKR  IVR
Sbjct: 121 QDGAARLS-GNAIVVKKQLFQKRAGIVR 147


>ref|XP_009367642.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Pyrus x
           bretschneideri]
          Length = 281

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
 Frame = -2

Query: 255 MATSFSSATSLRSILQPKQKP---LISFRESYGGGGFCAKCQPXXXXXXXXXXXXXXXSL 85
           MAT FS AT +R +LQPKQ P   L+S R+S+GGG  C KCQP                 
Sbjct: 1   MATHFSPATPVRFVLQPKQNPPKTLLSIRDSFGGGSACKKCQPRTVNVCSWSSSANYVRS 60

Query: 84  QDGTAKLSCSGTLILPRRLLQKRGSIVR 1
           QDG A+LS    +++ ++L QKR  IVR
Sbjct: 61  QDGAARLS-GNAIVVKKQLFQKRAGIVR 87


>ref|XP_008350057.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Malus
           domestica]
          Length = 281

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 38/88 (43%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
 Frame = -2

Query: 255 MATSFSSATSLRSILQPKQKP---LISFRESYGGGGFCAKCQPXXXXXXXXXXXXXXXSL 85
           MAT FS AT +R +LQPKQ P   L+S R+S+GGG  C KCQP                 
Sbjct: 1   MATHFSPATPVRFVLQPKQNPPKTLLSIRDSFGGGPACKKCQPRTVNVCPWSSSASYVRS 60

Query: 84  QDGTAKLSCSGTLILPRRLLQKRGSIVR 1
           QD  AKLS    +++ ++L Q R  IVR
Sbjct: 61  QDSAAKLS-GNAIVVKKQLFQNRAGIVR 87


>ref|XP_008368934.1| PREDICTED: ribosome-recycling factor, chloroplastic, partial [Malus
           domestica]
          Length = 227

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
 Frame = -2

Query: 255 MATSFSSATSLRSILQPKQKP---LISFRESYGGGGFCAKCQPXXXXXXXXXXXXXXXSL 85
           MAT FS AT +R +LQPKQ P    +S R+S+GGG  C KCQP                 
Sbjct: 1   MATHFSPATPVRFVLQPKQNPPKTXLSIRDSFGGGPACKKCQPRTVKVCSWSSSASYVRS 60

Query: 84  QDGTAKLSCSGTLILPRRLLQKRGSIVR 1
           +D  AK S    +++ ++L QKR  IVR
Sbjct: 61  EDSAAKFS-GNPIVVKKQLFQKRAGIVR 87


>ref|XP_008235289.1| PREDICTED: ribosome-recycling factor, chloroplastic [Prunus mume]
          Length = 281

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
 Frame = -2

Query: 255 MATSFSSATSLRSILQPKQKP---LISFRESYGGGGFCAKCQPXXXXXXXXXXXXXXXSL 85
           MAT FS AT +R  LQP Q P   L+S R+ +GGG  C KCQP                 
Sbjct: 1   MATHFSPATPVRFFLQPTQNPPKTLLSVRDPFGGGPVCKKCQPITVNVCSWSSAVSYVGS 60

Query: 84  QDGTAKLSCSGTLILPRRLLQKRGSIVR 1
           QDG+ K S    +++ ++ LQKR   VR
Sbjct: 61  QDGSMKFS-GNPIVVKKQFLQKRAGTVR 87


>ref|XP_004290648.1| PREDICTED: ribosome-recycling factor, chloroplastic [Fragaria vesca
           subsp. vesca]
          Length = 281

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 36/88 (40%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
 Frame = -2

Query: 255 MATSFSSATSLRSILQPKQKP---LISFRESYGGGGFCAKCQPXXXXXXXXXXXXXXXSL 85
           MAT  S A  +RSILQPKQ P   L+S R+SYG G    KCQP               + 
Sbjct: 1   MATHLSPANPVRSILQPKQNPPKALLSIRDSYGAGLVWKKCQPSTVNVCSWSSAASYVTP 60

Query: 84  QDGTAKLSCSGTLILPRRLLQKRGSIVR 1
             G AK S    +++ ++LLQKR   VR
Sbjct: 61  PGGAAKFS-GNPIVVKKQLLQKRAGTVR 87


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