BLASTX nr result
ID: Ziziphus21_contig00002274
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00002274
(1121 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu... 364 6e-98
ref|XP_010097238.1| DNA-directed RNA polymerase III subunit RPC6... 363 1e-97
ref|XP_011003010.1| PREDICTED: DNA-directed RNA polymerase III s... 363 1e-97
ref|XP_011003009.1| PREDICTED: DNA-directed RNA polymerase III s... 363 1e-97
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p... 362 4e-97
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu... 359 3e-96
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s... 356 2e-95
ref|XP_011048175.1| PREDICTED: DNA-directed RNA polymerase III s... 355 4e-95
ref|XP_012073203.1| PREDICTED: DNA-directed RNA polymerase III s... 355 4e-95
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 353 2e-94
ref|XP_009345829.1| PREDICTED: DNA-directed RNA polymerase III s... 352 3e-94
emb|CBI33284.3| unnamed protein product [Vitis vinifera] 352 4e-94
ref|XP_010647482.1| PREDICTED: DNA-directed RNA polymerase III s... 352 4e-94
ref|XP_008339509.1| PREDICTED: DNA-directed RNA polymerase III s... 351 7e-94
ref|XP_008238459.1| PREDICTED: DNA-directed RNA polymerase III s... 351 7e-94
ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prun... 350 1e-93
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr... 350 2e-93
ref|XP_008218752.1| PREDICTED: DNA-directed RNA polymerase III s... 349 3e-93
ref|XP_011008461.1| PREDICTED: DNA-directed RNA polymerase III s... 348 5e-93
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 348 5e-93
>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
gi|222866141|gb|EEF03272.1| hypothetical protein
POPTR_0018s04220g [Populus trichocarpa]
Length = 239
Score = 364 bits (935), Expect = 6e-98
Identities = 178/239 (74%), Positives = 204/239 (85%), Gaps = 1/239 (0%)
Frame = +1
Query: 124 MSRLQGPLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVN 303
MSRLQGP +LKRKRP+ NSP++SLTE ER+LYDVIRSKQD+GIWTRDMK+E LPDNVVN
Sbjct: 1 MSRLQGPSSLKRKRPEVNSPAQSLTEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVN 60
Query: 304 KSLKSLQAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQC 483
KSLK+LQ KKLIKEVVNIQNKGRKH+MA EFEPSKEISGGAWY+EGSLDTEFI+ LK C
Sbjct: 61 KSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLC 120
Query: 484 AKIIYKQRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDS 663
+ I ++ VAT+E + D I F V+ + QQIEEILR L+LDNV+M+VKSNGMGEF S
Sbjct: 121 KRQIERRGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFAS 180
Query: 664 IPVGKVCYKCTNK-GVRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
IP G+VCYK +K G+ GEPKAGA+ASIPCGVCPRI+ CTPDGIISP TCVYY KWLDF
Sbjct: 181 IPFGEVCYKYISKVGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWLDF 239
>ref|XP_010097238.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
gi|587878298|gb|EXB67305.1| DNA-directed RNA polymerase
III subunit RPC6 [Morus notabilis]
Length = 238
Score = 363 bits (933), Expect = 1e-97
Identities = 174/238 (73%), Positives = 205/238 (86%)
Frame = +1
Query: 124 MSRLQGPLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVN 303
MSRLQ P +LKRK+PDS SP +SLTE ERI+Y+VIRSKQDMGIW +DMKR +PDNV N
Sbjct: 1 MSRLQEPSSLKRKQPDSRSPLDSLTEHERIIYNVIRSKQDMGIWMQDMKRVAKVPDNVAN 60
Query: 304 KSLKSLQAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQC 483
K+LKSL+ KKLIKEVVNIQ +G+KHY+AAEFEP+ EI+GGAWY G +D I++LKDQC
Sbjct: 61 KALKSLETKKLIKEVVNIQKRGKKHYVAAEFEPATEITGGAWYSNGKMDFVVINILKDQC 120
Query: 484 AKIIYKQRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDS 663
K IYKQRVAT+EGILD IR++GI VE +T QIEE++RALVLDN V++VKSNGMGEFDS
Sbjct: 121 LKWIYKQRVATLEGILDAIRKSGISNVELTTVQIEELVRALVLDNEVVEVKSNGMGEFDS 180
Query: 664 IPVGKVCYKCTNKGVRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
IPVGKVCYK T+KG RG+PK GAM+SIPCGVCPRI+ CTPDGIISP TC YY++WLDF
Sbjct: 181 IPVGKVCYKSTSKGSRGDPKIGAMSSIPCGVCPRISDCTPDGIISPKTCKYYSQWLDF 238
>ref|XP_011003010.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Populus euphratica]
Length = 258
Score = 363 bits (932), Expect = 1e-97
Identities = 177/239 (74%), Positives = 202/239 (84%), Gaps = 1/239 (0%)
Frame = +1
Query: 124 MSRLQGPLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVN 303
MSRLQGP +LKRKRP+ NSP++SL E ER+LYDVIRSKQD+GIWTRDMK+E LPDNVVN
Sbjct: 20 MSRLQGPSSLKRKRPEVNSPAQSLNEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVN 79
Query: 304 KSLKSLQAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQC 483
KSLK+LQ KKLIKEVVNIQNKGRKH+MA EFEPSKEISGGAWY+EGSLDTEFI+ LK C
Sbjct: 80 KSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLC 139
Query: 484 AKIIYKQRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDS 663
+ I + VAT+E + D I F V+ + QQIEEILR L+LDNV+M+VKSNGMGEF S
Sbjct: 140 KRQIERSGVATLEAVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFAS 199
Query: 664 IPVGKVCYKCTNK-GVRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
IP G+VCYK +K G+ GEPKAGA+ASIPCGVCPRI+ CTPDGIISP TCVYY KWLDF
Sbjct: 200 IPFGEVCYKYVSKGGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWLDF 258
>ref|XP_011003009.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Populus euphratica]
Length = 239
Score = 363 bits (932), Expect = 1e-97
Identities = 177/239 (74%), Positives = 202/239 (84%), Gaps = 1/239 (0%)
Frame = +1
Query: 124 MSRLQGPLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVN 303
MSRLQGP +LKRKRP+ NSP++SL E ER+LYDVIRSKQD+GIWTRDMK+E LPDNVVN
Sbjct: 1 MSRLQGPSSLKRKRPEVNSPAQSLNEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVN 60
Query: 304 KSLKSLQAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQC 483
KSLK+LQ KKLIKEVVNIQNKGRKH+MA EFEPSKEISGGAWY+EGSLDTEFI+ LK C
Sbjct: 61 KSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLC 120
Query: 484 AKIIYKQRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDS 663
+ I + VAT+E + D I F V+ + QQIEEILR L+LDNV+M+VKSNGMGEF S
Sbjct: 121 KRQIERSGVATLEAVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFAS 180
Query: 664 IPVGKVCYKCTNK-GVRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
IP G+VCYK +K G+ GEPKAGA+ASIPCGVCPRI+ CTPDGIISP TCVYY KWLDF
Sbjct: 181 IPFGEVCYKYVSKGGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWLDF 239
>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
polymerase III subunit F, putative [Ricinus communis]
Length = 236
Score = 362 bits (928), Expect = 4e-97
Identities = 176/231 (76%), Positives = 200/231 (86%), Gaps = 1/231 (0%)
Frame = +1
Query: 148 ALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVNKSLKSLQA 327
ALKRK+P+S+SP++SLTE E LY+VI SKQDMGIWTRDMKRETNLPDNVVNKSLK LQA
Sbjct: 6 ALKRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVNKSLKVLQA 65
Query: 328 KKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQCAKIIYKQR 507
K LIKEVVNIQNKGRKHYMA EFEPSKEI+GGAWYVEG+LDTEFI LLK+ C K + K +
Sbjct: 66 KNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLKLK 125
Query: 508 VATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDSIPVGKVCY 687
VAT+EGI D I+R+GIF E + QQIEEI++ALVLDN +++VKSNGM EF IP+GKVCY
Sbjct: 126 VATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPIGKVCY 185
Query: 688 KCTNKG-VRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
KC KG GEP+ GAMASIPCGVCPRI+ CTPDGIISP TCVYY+KWLDF
Sbjct: 186 KCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWLDF 236
>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
gi|550346475|gb|EEE82426.2| hypothetical protein
POPTR_0001s04090g [Populus trichocarpa]
Length = 291
Score = 359 bits (921), Expect = 3e-96
Identities = 178/251 (70%), Positives = 205/251 (81%), Gaps = 1/251 (0%)
Frame = +1
Query: 88 GSLQSFALTLPRMSRLQGPLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDM 267
G L F + MSR+QGP +LKRKRP+ NSP +SLTE ERILYDVIRSKQD+GIWTRDM
Sbjct: 41 GCLFRFDVLSVGMSRVQGPSSLKRKRPELNSPVQSLTEHERILYDVIRSKQDIGIWTRDM 100
Query: 268 KRETNLPDNVVNKSLKSLQAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSL 447
K+E LPDNVVNKSLK+L+ K LIKEVVNIQNKGRKH+MA EFEPSKEISGGAWY+EGSL
Sbjct: 101 KKEAKLPDNVVNKSLKALRVKNLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSL 160
Query: 448 DTEFIDLLKDQCAKIIYKQRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVM 627
DTEFI+ L+ C + I K+ VAT+E + D I F V+ + QQIEEILR L+LDN +M
Sbjct: 161 DTEFIESLRQLCKRQIEKKGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNAIM 220
Query: 628 DVKSNGMGEFDSIPVGKVCYKCTNKG-VRGEPKAGAMASIPCGVCPRINLCTPDGIISPT 804
+VKSNGMGEF SIP GKVCY+ +KG + GEPKAGA+ASIPCGVCPRI+ CTPDGIISP
Sbjct: 221 EVKSNGMGEFASIPFGKVCYRYISKGALGGEPKAGALASIPCGVCPRISHCTPDGIISPK 280
Query: 805 TCVYYNKWLDF 837
TCVYY KWLDF
Sbjct: 281 TCVYYQKWLDF 291
>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera] gi|731402737|ref|XP_010654780.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera] gi|731402739|ref|XP_010654781.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 356 bits (913), Expect = 2e-95
Identities = 173/240 (72%), Positives = 202/240 (84%), Gaps = 2/240 (0%)
Frame = +1
Query: 124 MSRLQGPLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVN 303
MSR QG L+LKRKRPD+N+ S+ L + ER+LYD+IRSK+DMGIWTRDMKRETNLPDNVV
Sbjct: 1 MSRSQG-LSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59
Query: 304 KSLKSLQAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQC 483
KSLK+LQ KKLIKEVVNIQ+KGRKHYMA EFEPSKE++GGAWYVEG+LDTE+I +LK+ C
Sbjct: 60 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119
Query: 484 AKIIYKQRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDS 663
K++ K +VAT EGI + I +TG+ E STQQI EILRALVLDN +M+V+S+G GEF S
Sbjct: 120 VKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179
Query: 664 IPVGKVCYKCTNKG--VRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
IP+G VCY+CTNKG G PK GAMASIPCGVCPRI CTPDGIISP +C YY KWLDF
Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWLDF 239
>ref|XP_011048175.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Populus euphratica] gi|743909396|ref|XP_011048177.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC6-like [Populus euphratica]
gi|743909398|ref|XP_011048178.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC6-like [Populus
euphratica]
Length = 239
Score = 355 bits (911), Expect = 4e-95
Identities = 173/239 (72%), Positives = 200/239 (83%), Gaps = 1/239 (0%)
Frame = +1
Query: 124 MSRLQGPLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVN 303
MSR+QGP +LKRKRP+ NSP +SLTE ERILYDVIR KQD+GIWTRDMK+E LPDNVVN
Sbjct: 1 MSRVQGPSSLKRKRPELNSPVQSLTEHERILYDVIRGKQDIGIWTRDMKKEAKLPDNVVN 60
Query: 304 KSLKSLQAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQC 483
KSLK+L+ K LIKEVVNIQNKGRKH+MA EFEPSKEISGGAWY+EGSLDTEFI+ L+ C
Sbjct: 61 KSLKALRVKNLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLRQLC 120
Query: 484 AKIIYKQRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDS 663
+ I K+ VAT+ + D+I F V+ + QQIEEILR L+LDN +M+VKSNGMGEF S
Sbjct: 121 KRQIEKKGVATLVEVTDMINSYPAFNVDVTKQQIEEILRTLILDNAIMEVKSNGMGEFAS 180
Query: 664 IPVGKVCYKCTNK-GVRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
IP G+VCYK +K G+ GEPKAGA+ASIPCGVCPRI+ CTPDGIISP TCVYY KWLDF
Sbjct: 181 IPFGEVCYKYVSKGGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWLDF 239
>ref|XP_012073203.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Jatropha
curcas] gi|317106726|dbj|BAJ53222.1| JHL06P13.1
[Jatropha curcas] gi|643729216|gb|KDP37096.1|
hypothetical protein JCGZ_06152 [Jatropha curcas]
Length = 235
Score = 355 bits (911), Expect = 4e-95
Identities = 177/238 (74%), Positives = 196/238 (82%)
Frame = +1
Query: 124 MSRLQGPLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVN 303
MSR QG KRK+P+SNS ++SLTE E+ LY+ IRSKQDMGIWTRDMKRETNLPD VVN
Sbjct: 1 MSRFQGQ---KRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRETNLPDTVVN 57
Query: 304 KSLKSLQAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQC 483
KSLK LQAK LIKEVVNIQNKGRK+YMA EFEPSKEI+GG WYVEG+LDT FI +LKDQC
Sbjct: 58 KSLKVLQAKNLIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQC 117
Query: 484 AKIIYKQRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDS 663
K I K +VATVE + D I RTG+ V + QQIEEIL+ALVLDN V +VKSNGMGEF S
Sbjct: 118 KKQIEKLKVATVEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNGMGEFAS 177
Query: 664 IPVGKVCYKCTNKGVRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
IPVGKVCYK KG G+PK GAMASIPCGVCPRI CTP+GIISP TCVYY KWL+F
Sbjct: 178 IPVGKVCYKSIGKGSSGDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGKWLEF 235
>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 353 bits (905), Expect = 2e-94
Identities = 171/240 (71%), Positives = 200/240 (83%), Gaps = 2/240 (0%)
Frame = +1
Query: 124 MSRLQGPLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVN 303
MSR QG +LKRKRPD+N+ S+ L + ER+LYD+IRSK+DMGIWTRDMKRETNLPDNVV
Sbjct: 1 MSRSQGS-SLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59
Query: 304 KSLKSLQAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQC 483
KSLK+LQ KKLIKEVVNIQ+KGRKHYMA EFEPSKE++GGAWYVEG+LDTE+I +LK+ C
Sbjct: 60 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119
Query: 484 AKIIYKQRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDS 663
+++ K +VAT EGI + I +TG+ E STQQI EILRALVLDN +M+V+S+G GEF S
Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179
Query: 664 IPVGKVCYKCTNKG--VRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
IP+G VCY+CTNKG G P GAMASIPCGVCPRI CTPDGIISP TC YY KWLDF
Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239
>ref|XP_009345829.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Pyrus
x bretschneideri] gi|694437628|ref|XP_009345830.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc6-like [Pyrus x bretschneideri]
gi|694437630|ref|XP_009345831.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc6-like [Pyrus x
bretschneideri] gi|694437665|ref|XP_009345848.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc6-like [Pyrus x bretschneideri]
gi|694437667|ref|XP_009345849.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc6-like [Pyrus x
bretschneideri] gi|694437669|ref|XP_009345850.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc6-like [Pyrus x bretschneideri]
Length = 231
Score = 352 bits (903), Expect = 3e-94
Identities = 168/229 (73%), Positives = 200/229 (87%), Gaps = 1/229 (0%)
Frame = +1
Query: 154 KRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVNKSLKSLQAKK 333
KRK+PDS+SP++SL++ ERILY+VI SKQDMGIWTRDMK+ETNLPD V N +LK+LQAKK
Sbjct: 3 KRKQPDSSSPADSLSQNERILYNVIHSKQDMGIWTRDMKKETNLPDKVFNAALKTLQAKK 62
Query: 334 LIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQCAKIIYKQRVA 513
LI+EVVN+Q+KGRKHY+A EFEPSKE++GGAWY EG LD ++I+L+KDQ AK+IY+Q+VA
Sbjct: 63 LIQEVVNVQSKGRKHYIATEFEPSKELTGGAWYSEGKLDKDYINLVKDQFAKMIYQQKVA 122
Query: 514 TVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDSIPVGKVCYKC 693
T+EGI D IR+T IFK EF+ QQ EEI+R LVLDN VM+VKS GMGEF SI +GKVCYKC
Sbjct: 123 TLEGIADAIRKTKIFKTEFTKQQTEEIVRDLVLDNRVMEVKSTGMGEFASIQIGKVCYKC 182
Query: 694 TNK-GVRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
K G RGE K GAMASIPCGVCPRI+ CTPDGIISP+TCVY+ KWLDF
Sbjct: 183 KGKGGTRGETKVGAMASIPCGVCPRISQCTPDGIISPSTCVYFAKWLDF 231
>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 352 bits (902), Expect = 4e-94
Identities = 171/240 (71%), Positives = 199/240 (82%), Gaps = 2/240 (0%)
Frame = +1
Query: 124 MSRLQGPLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVN 303
MSR QG +LKRKRPD+N+ S+ L + ER+LYD+IRSK+DMGIWTRDMKRETNLPDNVV
Sbjct: 62 MSRSQGS-SLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 120
Query: 304 KSLKSLQAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQC 483
KSLK+LQ KKLIKEVVNIQ+KGRKHYMA EFEPSKE++GGAWYVEG+LDTE+I +LK C
Sbjct: 121 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTC 180
Query: 484 AKIIYKQRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDS 663
+++ K +VAT EGI + I +TG+ E STQQI EILRALVLDN +M+V+S+G GEF S
Sbjct: 181 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 240
Query: 664 IPVGKVCYKCTNKG--VRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
IP+G VCY+CTNKG G P GAMASIPCGVCPRI CTPDGIISP TC YY KWLDF
Sbjct: 241 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 300
>ref|XP_010647482.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 352 bits (902), Expect = 4e-94
Identities = 171/240 (71%), Positives = 199/240 (82%), Gaps = 2/240 (0%)
Frame = +1
Query: 124 MSRLQGPLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVN 303
MSR QG +LKRKRPD+N+ S+ L + ER+LYD+IRSK+DMGIWTRDMKRETNLPDNVV
Sbjct: 1 MSRSQGS-SLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59
Query: 304 KSLKSLQAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQC 483
KSLK+LQ KKLIKEVVNIQ+KGRKHYMA EFEPSKE++GGAWYVEG+LDTE+I +LK C
Sbjct: 60 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTC 119
Query: 484 AKIIYKQRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDS 663
+++ K +VAT EGI + I +TG+ E STQQI EILRALVLDN +M+V+S+G GEF S
Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179
Query: 664 IPVGKVCYKCTNKG--VRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
IP+G VCY+CTNKG G P GAMASIPCGVCPRI CTPDGIISP TC YY KWLDF
Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239
>ref|XP_008339509.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Malus
domestica] gi|658034767|ref|XP_008352902.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc6-like [Malus
domestica] gi|658034769|ref|XP_008352904.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc6-like [Malus
domestica]
Length = 231
Score = 351 bits (900), Expect = 7e-94
Identities = 167/229 (72%), Positives = 200/229 (87%), Gaps = 1/229 (0%)
Frame = +1
Query: 154 KRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVNKSLKSLQAKK 333
KRK+PDS+SP++SL++ ERILY+VI KQDMGIWTRDMK+ETNLPD V N +LK+LQAKK
Sbjct: 3 KRKQPDSSSPADSLSQNERILYNVIHGKQDMGIWTRDMKKETNLPDKVFNAALKTLQAKK 62
Query: 334 LIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQCAKIIYKQRVA 513
LI+EVVN+Q+KGRKHY+A EFEPSKE++GGAWY EG LD ++I+L+KDQ AK+IY+Q+VA
Sbjct: 63 LIQEVVNVQSKGRKHYIATEFEPSKELTGGAWYSEGKLDKDYINLVKDQFAKMIYQQKVA 122
Query: 514 TVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDSIPVGKVCYKC 693
T+EGI D IR+T IFK EF+ QQ EEI+R LVLDN VM+VKS GMGEF SI +GKVCYKC
Sbjct: 123 TLEGIADAIRKTKIFKTEFTKQQTEEIVRDLVLDNRVMEVKSTGMGEFASIQIGKVCYKC 182
Query: 694 TNK-GVRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
+K G RGE K GAMASIPCGVCPRI+ CTPDGIISP+TCVY+ KWLDF
Sbjct: 183 KSKGGTRGETKVGAMASIPCGVCPRISQCTPDGIISPSTCVYFAKWLDF 231
>ref|XP_008238459.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Prunus mume]
Length = 236
Score = 351 bits (900), Expect = 7e-94
Identities = 170/233 (72%), Positives = 198/233 (84%), Gaps = 1/233 (0%)
Frame = +1
Query: 142 PLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVNKSLKSL 321
P ALKRK+PDS+SPSESLTE E+I+Y VIRSKQDMGIWTRDMK+E NLPDN+V KS+KSL
Sbjct: 4 PSALKRKQPDSSSPSESLTEHEKIVYTVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSL 63
Query: 322 QAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQCAKIIYK 501
QAK LIKEVVN+Q+KGRKHYMAAEFEPSKE++GG WY G+LD +I +KD AKIIY+
Sbjct: 64 QAKNLIKEVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNGTLDKYYITCVKDGFAKIIYQ 123
Query: 502 QRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDSIPVGKV 681
+VAT+EGI ++++GIFK F+ QQIEEILR LVLD V +VKSNGMGEF S PVGK+
Sbjct: 124 LKVATLEGISHEVKKSGIFKTSFTKQQIEEILRVLVLDKRVTEVKSNGMGEFGSFPVGKI 183
Query: 682 CYKCTNK-GVRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
CYK T+K G + EPKAGAMASIPCGVCPRI+ CTPDGIISP TCVY+ KWLDF
Sbjct: 184 CYKSTSKGGTKREPKAGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWLDF 236
>ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
gi|462404542|gb|EMJ10006.1| hypothetical protein
PRUPE_ppa024742mg [Prunus persica]
Length = 236
Score = 350 bits (898), Expect = 1e-93
Identities = 170/233 (72%), Positives = 197/233 (84%), Gaps = 1/233 (0%)
Frame = +1
Query: 142 PLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVNKSLKSL 321
P ALKRK+PDS+SPSESLTE E+I+Y VIRSKQDMGIWTRDMK+E NLPDN+V KS+KSL
Sbjct: 4 PSALKRKQPDSSSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSL 63
Query: 322 QAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQCAKIIYK 501
QAK LIKEVVN+Q+KGRKHYMAAEFEPSKE++GG WY G+LD +I +KD AKIIY+
Sbjct: 64 QAKNLIKEVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNGTLDKYYISCVKDGFAKIIYQ 123
Query: 502 QRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDSIPVGKV 681
+VAT+EGI D ++++GIFK F+ QQIEEILR LVLD V +VKS GMGEF S PVGKV
Sbjct: 124 LKVATLEGISDEVKKSGIFKTSFTKQQIEEILRVLVLDKRVTEVKSTGMGEFGSFPVGKV 183
Query: 682 CYKCTNK-GVRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
CYK T+K G + EPK GAMASIPCGVCPRI+ CTPDGIISP TCVY+ KWLDF
Sbjct: 184 CYKSTSKGGSKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWLDF 236
>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gi|557529238|gb|ESR40488.1| hypothetical protein
CICLE_v10026399mg [Citrus clementina]
gi|641825965|gb|KDO45213.1| hypothetical protein
CISIN_1g026766mg [Citrus sinensis]
gi|641825966|gb|KDO45214.1| hypothetical protein
CISIN_1g026766mg [Citrus sinensis]
Length = 233
Score = 350 bits (897), Expect = 2e-93
Identities = 170/231 (73%), Positives = 197/231 (85%), Gaps = 3/231 (1%)
Frame = +1
Query: 154 KRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRE--TNLPDNVVNKSLKSLQA 327
KRKRPDSN+PS+SLT+ ER++YDVIRSKQDMGIWTRDMKRE NLPDN+V KS+KSLQ
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 328 KKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQCAKIIYKQR 507
K LIKEVVNI +KG+KH MA EFEPSKEISGGAWY EGSLDTEFI ++K QC K I K +
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 508 VATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDSIPVGKVCY 687
VAT+EGI D I+R+G FKV+ + QQIEEI+RALVLDN +M+VKSNG GEF +IPVGKVCY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 688 KCTNK-GVRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
K +K G GEPK G++ASIPCGVCP+IN+C PDG+ISP TCVYY KWLDF
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICKPDGVISPKTCVYYTKWLDF 233
>ref|XP_008218752.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Prunus mume]
Length = 236
Score = 349 bits (895), Expect = 3e-93
Identities = 168/233 (72%), Positives = 197/233 (84%), Gaps = 1/233 (0%)
Frame = +1
Query: 142 PLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVNKSLKSL 321
P ALKRK+PDSNSPSESLTE E+I+Y+VIRSKQDMGIWTRDMK+E NLPDN+V KS+KSL
Sbjct: 4 PSALKRKQPDSNSPSESLTEHEKIIYNVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSL 63
Query: 322 QAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQCAKIIYK 501
QAK LIKEVVN+Q+KGRKHYMA+EFEPSKE++GG WY G+LD +I +KD AKIIY+
Sbjct: 64 QAKNLIKEVVNVQSKGRKHYMASEFEPSKELTGGDWYSNGTLDKYYITCVKDGFAKIIYQ 123
Query: 502 QRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDSIPVGKV 681
+VAT+EGI D ++++GIFK F+ QIEEILR LVLD + +VKS GMGEF S PVGKV
Sbjct: 124 LKVATLEGISDEVKKSGIFKTSFTRPQIEEILRVLVLDKRITEVKSTGMGEFASFPVGKV 183
Query: 682 CYKCTNK-GVRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
CYK T+K G + EPK GAMASIPCGVCPRI+ CTPDGIISP TCVY+ KWLDF
Sbjct: 184 CYKSTSKGGTKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWLDF 236
>ref|XP_011008461.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Populus euphratica] gi|743928510|ref|XP_011008462.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC6-like [Populus euphratica]
Length = 241
Score = 348 bits (893), Expect = 5e-93
Identities = 173/241 (71%), Positives = 200/241 (82%), Gaps = 3/241 (1%)
Frame = +1
Query: 124 MSRLQGPLA-LKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVV 300
MSR QG + LKRKRP +SPS+SL + ER LYDVIRSK+DMGIWTRDMK+ETNLPDNVV
Sbjct: 1 MSRSQGSSSSLKRKRPGLSSPSQSLIDHERKLYDVIRSKKDMGIWTRDMKKETNLPDNVV 60
Query: 301 NKSLKSLQAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQ 480
NKSLK+L AK LIKEVVNIQNKGRKHYMA EF+PSKE++GG+WYV GSLDT+FI L+
Sbjct: 61 NKSLKALHAKNLIKEVVNIQNKGRKHYMATEFQPSKELTGGSWYVAGSLDTDFIGSLRMF 120
Query: 481 CAKIIYKQRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFD 660
C K I +++VATVE + ++IR G F VE + QQ+EEI+RALVLD+ VM+VKSNGMGEF
Sbjct: 121 CVKYIAEEKVATVEQVTELIRGNGAFAVEVTKQQVEEIVRALVLDDEVMEVKSNGMGEFG 180
Query: 661 SIPVGKVCYKCTNKGVRGEPKA--GAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLD 834
S+PVG VCYKC KG G KA GAMASIPCGVCPRI+LCTPDG+ISP TCVYY KWLD
Sbjct: 181 SVPVGNVCYKCVGKGRGGGVKAVIGAMASIPCGVCPRISLCTPDGVISPRTCVYYTKWLD 240
Query: 835 F 837
F
Sbjct: 241 F 241
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Citrus sinensis]
Length = 233
Score = 348 bits (893), Expect = 5e-93
Identities = 169/231 (73%), Positives = 197/231 (85%), Gaps = 3/231 (1%)
Frame = +1
Query: 154 KRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRE--TNLPDNVVNKSLKSLQA 327
KRKRP+SN+PS+SLT+ ER++YDVIRSKQDMGIWTRDMKRE NLPDN+V KS+KSLQ
Sbjct: 3 KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 328 KKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQCAKIIYKQR 507
K LIKEVVNI +KG+KH MA EFEPSKEISGGAWY EGSLDTEFI ++K QC K I K +
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 508 VATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDSIPVGKVCY 687
VAT+EGI D I+R+G FKV+ + QQIEEI+RALVLDN +M+VKSNG GEF +IPVGKVCY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 688 KCTNK-GVRGEPKAGAMASIPCGVCPRINLCTPDGIISPTTCVYYNKWLDF 837
K +K G GEPK G++ASIPCGVCP+IN+CTPDG+ISP TCVYY WLDF
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICTPDGVISPKTCVYYTTWLDF 233