BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00001326
         (2653 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010094587.1| hypothetical protein L484_024883 [Morus nota...  1086   0.0  
ref|XP_007225185.1| hypothetical protein PRUPE_ppa002191mg [Prun...  1077   0.0  
ref|XP_008221147.1| PREDICTED: pentatricopeptide repeat-containi...  1076   0.0  
ref|XP_011459077.1| PREDICTED: pentatricopeptide repeat-containi...  1060   0.0  
ref|XP_008377072.1| PREDICTED: pentatricopeptide repeat-containi...  1060   0.0  
ref|XP_007018010.1| Pentatricopeptide repeat (PPR-like) superfam...  1055   0.0  
ref|XP_012073668.1| PREDICTED: pentatricopeptide repeat-containi...  1052   0.0  
gb|KHG22213.1| hypothetical protein F383_28108 [Gossypium arboreum]  1049   0.0  
ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containi...  1049   0.0  
ref|XP_012464758.1| PREDICTED: pentatricopeptide repeat-containi...  1047   0.0  
ref|XP_007018011.1| Pentatricopeptide repeat (PPR-like) superfam...  1046   0.0  
ref|XP_012464747.1| PREDICTED: pentatricopeptide repeat-containi...  1040   0.0  
ref|XP_010266137.1| PREDICTED: pentatricopeptide repeat-containi...  1039   0.0  
ref|XP_002510663.1| pentatricopeptide repeat-containing protein,...  1037   0.0  
ref|XP_002306972.1| hypothetical protein POPTR_0005s27160g [Popu...  1031   0.0  
ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containi...  1026   0.0  
ref|XP_008347337.1| PREDICTED: pentatricopeptide repeat-containi...  1025   0.0  
ref|XP_008464858.1| PREDICTED: pentatricopeptide repeat-containi...  1024   0.0  
ref|XP_011041249.1| PREDICTED: pentatricopeptide repeat-containi...  1022   0.0  
ref|XP_013462265.1| PPR containing plant-like protein [Medicago ...  1018   0.0  

>ref|XP_010094587.1| hypothetical protein L484_024883 [Morus notabilis]
            gi|587866903|gb|EXB56341.1| hypothetical protein
            L484_024883 [Morus notabilis]
          Length = 734

 Score = 1086 bits (2809), Expect = 0.0
 Identities = 566/717 (78%), Positives = 611/717 (85%), Gaps = 14/717 (1%)
 Frame = -1

Query: 2542 LLLPLPVPSRFPSIQLASPIIIGRHHHNH----------IFQPPVSAVATSTSCTHDEAF 2393
            LLLP P  ++FPSIQ  +     RHHH H          +F    SAV+TS S    EA 
Sbjct: 3    LLLPPPASAKFPSIQTTTTFHT-RHHHQHHYHYTSSQLLLFSAAASAVSTSGS---GEAP 58

Query: 2392 LSTSNS--KRRFDDENDLHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXSEPAKSGS-- 2225
            LS+S+S  +RRFDDENDL SLRNRRYDF                          +SGS  
Sbjct: 59   LSSSSSSMRRRFDDENDLVSLRNRRYDFNPLLNFLSNRTNISAA---------TESGSDP 109

Query: 2224 PTSLDPEEFLLAESYRAVPAPLWHXXXXXXXXXXXSIGLAYAVVFWLQKHNLCFSYELLY 2045
            PTSLD EEF LAESYRAVPA LWH           SIGLAYAVV WLQKHNLCFSYELLY
Sbjct: 110  PTSLDREEFELAESYRAVPALLWHSLLKSLCSKSSSIGLAYAVVSWLQKHNLCFSYELLY 169

Query: 2044 SILIHALGRSEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQS 1865
            SILIHALGRSEKLYEAFLLSQRQTLT LTYNALIGACARN+DLEKALNLM+RMRQDGF S
Sbjct: 170  SILIHALGRSEKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMARMRQDGFPS 229

Query: 1864 DFVNYSLVIQSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAMH 1685
            DFVNYSL+IQSLTR NKI+SP+LQKLY+EIE DKIELDGQLLNDIIVGFAKAGDP++AMH
Sbjct: 230  DFVNYSLIIQSLTRKNKIDSPILQKLYKEIECDKIELDGQLLNDIIVGFAKAGDPSQAMH 289

Query: 1684 FLAAAQAIGLSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGYV 1505
            FLA  QA+GLSP+TATL AVI ALGNSGR VEAE +FEEIK+GGL+PRTRAYNALLKGYV
Sbjct: 290  FLAVVQAMGLSPKTATLTAVISALGNSGRIVEAEALFEEIKDGGLQPRTRAYNALLKGYV 349

Query: 1504 KAGSLKDAESIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSY 1325
            KA SLKDAES+VSEME NGV+PD+HTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSY
Sbjct: 350  KASSLKDAESVVSEMEMNGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSY 409

Query: 1324 VFSRILASYRDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDRM 1145
            VFSRILASYRDRGEWQKTFQVLREMK SGVRPDRHFYNVMIDTFGK+NCLDHAMATF+RM
Sbjct: 410  VFSRILASYRDRGEWQKTFQVLREMKSSGVRPDRHFYNVMIDTFGKFNCLDHAMATFERM 469

Query: 1144 LSEGIQPDTVTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQERW 965
            + +GIQPDTVTWNTLI+CHCK+GRH RAEELFEEM E G  PCATTYNI+INSFGEQERW
Sbjct: 470  ILDGIQPDTVTWNTLINCHCKAGRHERAEELFEEMQERGYPPCATTYNILINSFGEQERW 529

Query: 964  DDVKGLLVKMQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNAL 785
            DDVK LL KMQSQGLLPNVVTYTTL+DIYGQSGRFNDA++CL+ MK++GLKPS+TMYNAL
Sbjct: 530  DDVKVLLGKMQSQGLLPNVVTYTTLIDIYGQSGRFNDAMDCLQDMKTSGLKPSSTMYNAL 589

Query: 784  INAYAQRGLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENDV 605
            INAYAQRGLSEQA+NAFR+MR DGLKPS+LALNSLINAFGEDRRDAEAFAVLQYMKEN +
Sbjct: 590  INAYAQRGLSEQALNAFRLMRGDGLKPSILALNSLINAFGEDRRDAEAFAVLQYMKENGL 649

Query: 604  KPDVVTYTTLMKALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTIK 434
            KPDVVTYTTLMKAL RVDKF +VP VYEEMI SGCTPDRKAR MLRSALRYMKQT+K
Sbjct: 650  KPDVVTYTTLMKALNRVDKFDKVPVVYEEMISSGCTPDRKAREMLRSALRYMKQTLK 706


>ref|XP_007225185.1| hypothetical protein PRUPE_ppa002191mg [Prunus persica]
            gi|462422121|gb|EMJ26384.1| hypothetical protein
            PRUPE_ppa002191mg [Prunus persica]
          Length = 703

 Score = 1077 bits (2784), Expect = 0.0
 Identities = 557/717 (77%), Positives = 610/717 (85%), Gaps = 13/717 (1%)
 Frame = -1

Query: 2545 MLLLPLPVP--SRFPSIQLASPIIIGRHHHNH------IFQPPVSAVATSTSCTH---DE 2399
            MLLLP+PVP  +RFPS QLASPI+I  HHH+H            +A  T++S  H     
Sbjct: 1    MLLLPVPVPGSTRFPSFQLASPILIRHHHHHHHMFHLWSLSATTAAAVTNSSQAHLPPIP 60

Query: 2398 AFLSTSNSKRR-FDDENDLHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXSEPAKSGSP 2222
            +  STSNS+RR FDD+    S    RYDF                         + + SP
Sbjct: 61   SSTSTSNSRRRSFDDDQAAVS----RYDFSPLLTFLAAKSMSMS----------SSASSP 106

Query: 2221 TSLDPEEFLLAESYRAVPAPLWHXXXXXXXXXXXS-IGLAYAVVFWLQKHNLCFSYELLY 2045
            TSLDP EF LAESYRAVPAPLWH           S I LAYAVV WLQKHNLCFSYELLY
Sbjct: 107  TSLDPAEFQLAESYRAVPAPLWHSLLKSLCSSSSSDIQLAYAVVSWLQKHNLCFSYELLY 166

Query: 2044 SILIHALGRSEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQS 1865
            SILIHALGRSEKLYEAFLLSQRQ+LT LTYNALIGACARN DLEKAL+LMSRMRQDG++S
Sbjct: 167  SILIHALGRSEKLYEAFLLSQRQSLTPLTYNALIGACARNGDLEKALHLMSRMRQDGYRS 226

Query: 1864 DFVNYSLVIQSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAMH 1685
            DFVNYSL+IQSL+R+NKI+SP++ KLYREIE++ IE+DGQL NDII GFAKAG+P +AMH
Sbjct: 227  DFVNYSLIIQSLSRSNKIDSPIMLKLYREIESESIEIDGQLYNDIIAGFAKAGEPTQAMH 286

Query: 1684 FLAAAQAIGLSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGYV 1505
             LA  QA GLSP+TATLVA+I ALGN GR VEAE IFEE+KEGGL+PRTRAYNALLKGYV
Sbjct: 287  LLAMVQATGLSPKTATLVALISALGNCGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYV 346

Query: 1504 KAGSLKDAESIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSY 1325
            KA  LKDAESIVS+MEK+G++PD+HTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSY
Sbjct: 347  KAAQLKDAESIVSQMEKSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSY 406

Query: 1324 VFSRILASYRDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDRM 1145
            VFSRILASYRDRGEWQK+FQVLREMK SGVRPDRHFYNVMIDTFGK NCLDH MATF+RM
Sbjct: 407  VFSRILASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHVMATFERM 466

Query: 1144 LSEGIQPDTVTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQERW 965
            LSEGIQPDTVTWNTLIDCHCKSG H RAEELFEEMH+SGC+PCATTYNIMINSFGEQ+RW
Sbjct: 467  LSEGIQPDTVTWNTLIDCHCKSGHHKRAEELFEEMHQSGCAPCATTYNIMINSFGEQQRW 526

Query: 964  DDVKGLLVKMQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNAL 785
             +VKGLL KMQ+QGLLPN+VTYTTLVDIYG+SGRFNDAIECLEVMKSAGLKPS TMYNAL
Sbjct: 527  VEVKGLLGKMQAQGLLPNIVTYTTLVDIYGKSGRFNDAIECLEVMKSAGLKPSPTMYNAL 586

Query: 784  INAYAQRGLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENDV 605
            INAYAQRGLSEQA+NAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAF+VLQYMKEND+
Sbjct: 587  INAYAQRGLSEQALNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDL 646

Query: 604  KPDVVTYTTLMKALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTIK 434
            KPDVVTYTTLMK LIRVDKF++VPAVYEEMILS CTPDRKARAMLRSAL+YMKQT++
Sbjct: 647  KPDVVTYTTLMKTLIRVDKFYKVPAVYEEMILSRCTPDRKARAMLRSALKYMKQTLR 703


>ref|XP_008221147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Prunus mume]
          Length = 702

 Score = 1076 bits (2782), Expect = 0.0
 Identities = 555/716 (77%), Positives = 609/716 (85%), Gaps = 12/716 (1%)
 Frame = -1

Query: 2545 MLLLPLPVPSR--FPSIQLASPIIIGRHHHNHIFQ-----PPVSAVATSTSCTH---DEA 2396
            MLLLP+PVP    FPS QLASPI+I  HHH+H+F         +A  T++S  H     +
Sbjct: 1    MLLLPVPVPGTTCFPSFQLASPILIRHHHHHHMFHLWSLSATTAAAVTNSSQAHLPPIPS 60

Query: 2395 FLSTSNSKRR-FDDENDLHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXSEPAKSGSPT 2219
              STSNS+RR FDD    H     RYDF                         + + SPT
Sbjct: 61   STSTSNSRRRSFDD----HQAAVSRYDFGPLLTFLAAKSMSMS----------SSASSPT 106

Query: 2218 SLDPEEFLLAESYRAVPAPLWHXXXXXXXXXXXS-IGLAYAVVFWLQKHNLCFSYELLYS 2042
            SLDP EF LAESYRAVP+PLWH           S I LAYAVV WLQKHNLCFSYELLYS
Sbjct: 107  SLDPAEFQLAESYRAVPSPLWHSLLKSLCSSSSSDIQLAYAVVSWLQKHNLCFSYELLYS 166

Query: 2041 ILIHALGRSEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQSD 1862
            ILIHALGRSEKLYEAFLLSQRQ+LT LTYNALIGACARN DLEKAL+LMSRMR+DG++SD
Sbjct: 167  ILIHALGRSEKLYEAFLLSQRQSLTPLTYNALIGACARNGDLEKALHLMSRMRRDGYRSD 226

Query: 1861 FVNYSLVIQSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAMHF 1682
            FVNYSL+IQSL+R+NKI+SP++ KLYREIE++ IE+DGQL NDII GFAKAG+P +AMH 
Sbjct: 227  FVNYSLIIQSLSRSNKIDSPIMLKLYREIESESIEIDGQLYNDIIAGFAKAGEPTQAMHL 286

Query: 1681 LAAAQAIGLSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGYVK 1502
            LA  QA GLSP+TATLVA+I ALGN GR VEAE IFEE+KEGGL+PRTRAYNALLKGYVK
Sbjct: 287  LAMVQATGLSPKTATLVALISALGNCGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVK 346

Query: 1501 AGSLKDAESIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYV 1322
            A  LKDAESIVS+MEK+G++PD+HTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYV
Sbjct: 347  AAQLKDAESIVSQMEKSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYV 406

Query: 1321 FSRILASYRDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDRML 1142
            FSRILASYRDRGEWQK+FQVLREMK SGVRPDRHFYNVMIDTFGK NCLDH MATF+RML
Sbjct: 407  FSRILASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHVMATFERML 466

Query: 1141 SEGIQPDTVTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQERWD 962
            SEGIQPDTVTWNTLIDCHCKSG H RAEELFEEMH+SGC+PCATTYNIMINSFGEQ+RW 
Sbjct: 467  SEGIQPDTVTWNTLIDCHCKSGHHKRAEELFEEMHQSGCAPCATTYNIMINSFGEQQRWV 526

Query: 961  DVKGLLVKMQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNALI 782
            +VKGLL KMQ+QGLLPN+VTYTTLVDIYG+SGRFNDAIECLEVMKSAGLKPS TMYNALI
Sbjct: 527  EVKGLLGKMQAQGLLPNIVTYTTLVDIYGKSGRFNDAIECLEVMKSAGLKPSPTMYNALI 586

Query: 781  NAYAQRGLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENDVK 602
            NAYAQRGLSEQA+NAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAF+VLQYMKEND+K
Sbjct: 587  NAYAQRGLSEQALNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDLK 646

Query: 601  PDVVTYTTLMKALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTIK 434
            PDVVTYTTLMK LIRVDKF++VPAVYEEMILS CTPDRKARAMLRSAL+YMKQT++
Sbjct: 647  PDVVTYTTLMKTLIRVDKFYKVPAVYEEMILSRCTPDRKARAMLRSALKYMKQTLR 702


>ref|XP_011459077.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Fragaria vesca subsp. vesca]
          Length = 698

 Score = 1060 bits (2742), Expect = 0.0
 Identities = 548/708 (77%), Positives = 601/708 (84%), Gaps = 4/708 (0%)
 Frame = -1

Query: 2545 MLLLPLPVPSRFPSIQLAS--PIIIGRHHHNHIFQPPVSAVATSTSCTHDEAFLSTSNSK 2372
            MLLLPLP  +RFPS+QLAS  PI+I RHHH  IF  P+SA       T  E+ L +    
Sbjct: 1    MLLLPLPGSTRFPSVQLASTSPILI-RHHH--IFHAPLSATTPCAVSTSAESHLPSLPPS 57

Query: 2371 RRFDDENDLHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXSEPAKSGSPTSLDPEEFLL 2192
            RR  D  D       RYDF                       +   S SPTSLDP EF L
Sbjct: 58   RRRFDNYDTDQATVSRYDFAPLLAFLSTSSSAH---------DVTDSASPTSLDPAEFQL 108

Query: 2191 AESYRAVPAPLWHXXXXXXXXXXXSIGL--AYAVVFWLQKHNLCFSYELLYSILIHALGR 2018
            AE YRAVPAPLWH           S  L  AYA+V WLQKHNLCFSYELLYSILIHALGR
Sbjct: 109  AELYRAVPAPLWHSLLKSLCSSSSSSSLKQAYALVAWLQKHNLCFSYELLYSILIHALGR 168

Query: 2017 SEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFVNYSLVI 1838
            SEKLYEAFLLSQR+TLT LTYNALIGACARN DLEKALNLMSRMRQDG++SDFVNYSLVI
Sbjct: 169  SEKLYEAFLLSQRRTLTPLTYNALIGACARNGDLEKALNLMSRMRQDGYRSDFVNYSLVI 228

Query: 1837 QSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAMHFLAAAQAIG 1658
            QSL R+NK++SP++ KLY+EIE++ +E+DGQLLND+IVGFAKAG+P++AMHFLA  QA G
Sbjct: 229  QSLNRSNKVDSPIMLKLYKEIESENVEIDGQLLNDLIVGFAKAGEPSQAMHFLAMVQASG 288

Query: 1657 LSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGYVKAGSLKDAE 1478
            LSP+TATLV+VI ALGN+GR VEAE IFEE+KEGGL+PRTRAYNALLKGYVKA SL+DAE
Sbjct: 289  LSPKTATLVSVISALGNAGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAASLEDAE 348

Query: 1477 SIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASY 1298
            SIVS+ME++G++PD+HTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASY
Sbjct: 349  SIVSQMERSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASY 408

Query: 1297 RDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEGIQPDT 1118
            RDRGEWQK+FQVLREM+ SGV PDRHFYNVMIDTFGK NCLDHAMATF+RMLSEGIQPDT
Sbjct: 409  RDRGEWQKSFQVLREMRSSGVMPDRHFYNVMIDTFGKSNCLDHAMATFERMLSEGIQPDT 468

Query: 1117 VTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQERWDDVKGLLVK 938
            VTWNTLID HCKSG HARAEELFEEM ESGC+PCATT+NIMINS GEQERWD+VKGL+ K
Sbjct: 469  VTWNTLIDIHCKSGHHARAEELFEEMQESGCAPCATTFNIMINSLGEQERWDEVKGLMGK 528

Query: 937  MQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNALINAYAQRGL 758
            MQSQGLLPN+VTYTTLVDIYG+SGRFNDAIECLE+MKSAGLKPS TMYNALINAYAQRGL
Sbjct: 529  MQSQGLLPNIVTYTTLVDIYGKSGRFNDAIECLEIMKSAGLKPSPTMYNALINAYAQRGL 588

Query: 757  SEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENDVKPDVVTYTT 578
            SE A+NAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAF+VLQYMKENDVKPDVVTYTT
Sbjct: 589  SELALNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDVKPDVVTYTT 648

Query: 577  LMKALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTIK 434
            LMKALIRVDKF++VP VYEEMI S  TPDRKARAMLRSAL+YMKQT+K
Sbjct: 649  LMKALIRVDKFYKVPDVYEEMIHSRVTPDRKARAMLRSALKYMKQTLK 696


>ref|XP_008377072.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Malus domestica]
          Length = 721

 Score = 1060 bits (2741), Expect = 0.0
 Identities = 546/721 (75%), Positives = 605/721 (83%), Gaps = 16/721 (2%)
 Frame = -1

Query: 2545 MLLLPLPVPSRFPSIQLASPIIIGRHHHNHIFQPPVSAVATSTSCTH--------DEAFL 2390
            M+LLP+P  + FPSIQLASP +I  HHH        +A  T++S  H            L
Sbjct: 1    MMLLPVPGSTCFPSIQLASPTLIRHHHHVWPLSATAAAAVTNSSEPHLPPIPSSSTTIHL 60

Query: 2389 STSNSKRRFDDEN------DLHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXSEPAKSG 2228
            ++++ +RRF D+       D   L     +                       S  + + 
Sbjct: 61   TSTSRRRRFGDDQAAASPYDFGPLLTFLANSLSSDNDSASSSSXXSXSSSSSSSSSSSTS 120

Query: 2227 SPTSLDPEEFLLAESYRAVPAPLWH--XXXXXXXXXXXSIGLAYAVVFWLQKHNLCFSYE 2054
            S TSLDP EF LA+SYRAVPAPLWH              IGLAYAVV WLQKHNLCFSYE
Sbjct: 121  SXTSLDPSEFQLAQSYRAVPAPLWHSLLKSLCASHSSSDIGLAYAVVSWLQKHNLCFSYE 180

Query: 2053 LLYSILIHALGRSEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDG 1874
            LLYSILIHALGRSEKLYEAFLLSQRQ+LT LTYNALIGACARN DLEKAL+LMSRMRQDG
Sbjct: 181  LLYSILIHALGRSEKLYEAFLLSQRQSLTPLTYNALIGACARNGDLEKALHLMSRMRQDG 240

Query: 1873 FQSDFVNYSLVIQSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNR 1694
            ++SDFVNYSL+IQSLTR+NKI+SP++ KLYREIE++ IE+DGQL NDII GFAKAG+P++
Sbjct: 241  YRSDFVNYSLIIQSLTRSNKIDSPIMFKLYREIESESIEIDGQLFNDIIAGFAKAGEPSQ 300

Query: 1693 AMHFLAAAQAIGLSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLK 1514
            A+H LA  QA GLSP+TATLVAVI ALGNSGR VEAE IFEE++EGGL+PRTRAYNALLK
Sbjct: 301  AVHLLAMVQATGLSPKTATLVAVISALGNSGRVVEAEAIFEEMREGGLQPRTRAYNALLK 360

Query: 1513 GYVKAGSLKDAESIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQP 1334
            GYVKAG LKDAESIVS+MEK+G++PD+HTYSLLIDAYANAGRWESARIVLKEMEASNVQP
Sbjct: 361  GYVKAGQLKDAESIVSQMEKSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQP 420

Query: 1333 NSYVFSRILASYRDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATF 1154
            NSYVFSRILASYRDRGEWQK+FQVLREMK SGVRPDRHFYNVMIDTFGK NCLDHAMATF
Sbjct: 421  NSYVFSRILASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHAMATF 480

Query: 1153 DRMLSEGIQPDTVTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQ 974
            +RMLSEGI PDTVTWNTLIDCHCKSG H RAEELFEEM +SGC+PCATTYNIMINSFGEQ
Sbjct: 481  ERMLSEGIHPDTVTWNTLIDCHCKSGHHVRAEELFEEMQQSGCAPCATTYNIMINSFGEQ 540

Query: 973  ERWDDVKGLLVKMQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMY 794
            +RWD+VKGLL KMQSQGLLPN+VTYTTLVDIYG+SGRF DAIECLEVMKSAG+KPS TMY
Sbjct: 541  QRWDEVKGLLGKMQSQGLLPNIVTYTTLVDIYGKSGRFTDAIECLEVMKSAGMKPSPTMY 600

Query: 793  NALINAYAQRGLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 614
            NALINAYAQRGLSEQA+NAFRVMRADGLKPS LALNSLINAFGEDRRD EAF+VLQYMKE
Sbjct: 601  NALINAYAQRGLSEQALNAFRVMRADGLKPSPLALNSLINAFGEDRRDTEAFSVLQYMKE 660

Query: 613  NDVKPDVVTYTTLMKALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTIK 434
            ND+KPDVVTYTTLMK LIRVDKF +VPAVYEEMI+SGCTPDRKARAMLRSAL+YMKQT++
Sbjct: 661  NDLKPDVVTYTTLMKTLIRVDKFCKVPAVYEEMIMSGCTPDRKARAMLRSALKYMKQTLR 720

Query: 433  S 431
            S
Sbjct: 721  S 721


>ref|XP_007018010.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1
            [Theobroma cacao] gi|508723338|gb|EOY15235.1|
            Pentatricopeptide repeat (PPR-like) superfamily protein
            isoform 1 [Theobroma cacao]
          Length = 703

 Score = 1055 bits (2727), Expect = 0.0
 Identities = 547/718 (76%), Positives = 604/718 (84%), Gaps = 13/718 (1%)
 Frame = -1

Query: 2545 MLLLPLPVPSRFPSIQLASPIIIGRHHHNHIFQPPVSAVATSTSCTHDEAFLSTSNSKR- 2369
            MLLLP P+P+RFPSIQL+SPI         +     +++ T+ + T  EA +S S  K  
Sbjct: 1    MLLLPPPLPARFPSIQLSSPI-------TRLHVSLQTSIYTAAAATAAEASISLSIDKDK 53

Query: 2368 ---RFDDEND----LHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXSEPAKSGSPTSLD 2210
               R+DDE+D    + S+  RRYDF                         + S SPTSLD
Sbjct: 54   DRDRYDDEDDDQSDVLSIHKRRYDFTPLLNYLSSSNSEPD--------SDSDSASPTSLD 105

Query: 2209 PEEFLLAESYRAVPAPLWHXXXXXXXXXXXS-----IGLAYAVVFWLQKHNLCFSYELLY 2045
            P EF LAESYRAVPAPLWH           S     I LAYAVV WLQ+HNLCFSYELLY
Sbjct: 106  PIEFQLAESYRAVPAPLWHSLLKSMCSSSSSSSSSSINLAYAVVSWLQRHNLCFSYELLY 165

Query: 2044 SILIHALGRSEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQS 1865
            SILIHALGRSEKLYEAFLLSQRQTLT LTYNALI ACARNNDLEKALNLMSRMRQDG+QS
Sbjct: 166  SILIHALGRSEKLYEAFLLSQRQTLTPLTYNALINACARNNDLEKALNLMSRMRQDGYQS 225

Query: 1864 DFVNYSLVIQSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAMH 1685
            DFVNYSL+IQSLTR+NKI+S LLQKLY EIE DKIE+DGQLLNDIIVGFAKA DP+ A+ 
Sbjct: 226  DFVNYSLIIQSLTRSNKIDSSLLQKLYGEIECDKIEVDGQLLNDIIVGFAKANDPSHALK 285

Query: 1684 FLAAAQAIGLSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGYV 1505
            FLA AQAIGL+P+TATLVAVI +LG  GR  EAE +FEE+K  GLKPRTRAYNALLKGYV
Sbjct: 286  FLAMAQAIGLNPKTATLVAVIYSLGCCGRIAEAEAVFEEMKGTGLKPRTRAYNALLKGYV 345

Query: 1504 KAGSLKDAESIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSY 1325
            KAGSLKDAE +VSEME++GV+PD+HTYSLLIDAYANAGRWESARIVLKEMEA+NVQPNS+
Sbjct: 346  KAGSLKDAELVVSEMERSGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEANNVQPNSF 405

Query: 1324 VFSRILASYRDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDRM 1145
            V+SRILASYR++GEWQ++FQVLREMK +G++PDRHFYNVMIDTFGKYNCLDHAM TFDRM
Sbjct: 406  VYSRILASYRNKGEWQRSFQVLREMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMDTFDRM 465

Query: 1144 LSEGIQPDTVTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQERW 965
            LSEGI+PDTVTWNTLIDCHCK+GRH RAEELFEEM ESG SPC TTYNIMINSFG QERW
Sbjct: 466  LSEGIKPDTVTWNTLIDCHCKAGRHGRAEELFEEMKESGYSPCTTTYNIMINSFGGQERW 525

Query: 964  DDVKGLLVKMQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNAL 785
            D+VK LL KMQSQGLLPN+VTYTTLVDIYG+SGRF+DA+ECLE+MKSAGLKPS TMYNAL
Sbjct: 526  DNVKSLLGKMQSQGLLPNIVTYTTLVDIYGKSGRFSDAMECLELMKSAGLKPSLTMYNAL 585

Query: 784  INAYAQRGLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENDV 605
            INAYAQRGLSEQA+NA R+MRADGLKP+LLALNSLINAFGEDRRD EAFAVLQYMKENDV
Sbjct: 586  INAYAQRGLSEQAINALRIMRADGLKPNLLALNSLINAFGEDRRDVEAFAVLQYMKENDV 645

Query: 604  KPDVVTYTTLMKALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTIKS 431
            KPDVVTYTTLMK+LIRVDKFH+VPAVYEEMILSGCTPDRKARAMLRSALRYMKQ +KS
Sbjct: 646  KPDVVTYTTLMKSLIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRYMKQKVKS 703


>ref|XP_012073668.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Jatropha curcas]
            gi|643728867|gb|KDP36804.1| hypothetical protein
            JCGZ_08095 [Jatropha curcas]
          Length = 705

 Score = 1052 bits (2720), Expect = 0.0
 Identities = 549/710 (77%), Positives = 596/710 (83%), Gaps = 6/710 (0%)
 Frame = -1

Query: 2545 MLLLPLPVPSRFPSIQLASPIIIGRHHHNHIFQPPVSAVATSTSCTHDEAFLST--SNSK 2372
            MLL P   P+RFPSI   SPI+   HHH  IFQ P+SA  ++   T   A L+   ++S 
Sbjct: 1    MLLFPPHSPTRFPSIHSPSPILHHHHHHQLIFQLPLSATNSTIPVTTVAANLADPYASSL 60

Query: 2371 RRFD-DENDLH---SLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXSEPAKSGSPTSLDPE 2204
            RR D D+ND+    +L +RRYDF                         ++S SPTSLD  
Sbjct: 61   RRLDNDQNDVEDILALHSRRYDFTPLLNFLSNKISSSEASTE------SESTSPTSLDAA 114

Query: 2203 EFLLAESYRAVPAPLWHXXXXXXXXXXXSIGLAYAVVFWLQKHNLCFSYELLYSILIHAL 2024
            EF LAESYRAVP PLWH           SIGLAYAVV WLQKHNLCFSYELLYSILIHAL
Sbjct: 115  EFELAESYRAVPGPLWHSVLKSLCSSSSSIGLAYAVVSWLQKHNLCFSYELLYSILIHAL 174

Query: 2023 GRSEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFVNYSL 1844
            GRSEKLYEAFLLSQRQTL+ LTYNALI ACARNN+LEKALNL+SRMRQDG+ SDFVNYSL
Sbjct: 175  GRSEKLYEAFLLSQRQTLSPLTYNALINACARNNELEKALNLISRMRQDGYPSDFVNYSL 234

Query: 1843 VIQSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAMHFLAAAQA 1664
            +I+SLTR+NKI+S +LQK+Y EIE DK+ELD QL NDIIVGFAKAGDP+RAM FL   Q 
Sbjct: 235  IIRSLTRSNKIDSVILQKIYNEIECDKLELDVQLSNDIIVGFAKAGDPSRAMEFLGMVQG 294

Query: 1663 IGLSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGYVKAGSLKD 1484
             GLSP  ATLVAVI ALG+SGRTVEAE IFEE+K+ GLKPRTRAYNALLKGYVKAGSLKD
Sbjct: 295  CGLSPGPATLVAVISALGDSGRTVEAEAIFEEMKDNGLKPRTRAYNALLKGYVKAGSLKD 354

Query: 1483 AESIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILA 1304
            AE IVSEMEK GV+PD+HTYSLLIDAYANAGRWESARIVLKEMEASNV PNSYVFSRILA
Sbjct: 355  AEFIVSEMEKTGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVMPNSYVFSRILA 414

Query: 1303 SYRDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEGIQP 1124
            SYRDRGEWQK+FQVLREMK+ GVRPDRHFYNVMIDTFGK+NCLDHAMATFDRM+SEGIQP
Sbjct: 415  SYRDRGEWQKSFQVLREMKNIGVRPDRHFYNVMIDTFGKFNCLDHAMATFDRMISEGIQP 474

Query: 1123 DTVTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQERWDDVKGLL 944
            D VTWNTLID HCK+ RH RAEELFEEM E G SPC TT+NIMINSFGEQ+RWDDVK L+
Sbjct: 475  DAVTWNTLIDSHCKAERHDRAEELFEEMMEKGFSPCTTTFNIMINSFGEQQRWDDVKSLM 534

Query: 943  VKMQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNALINAYAQR 764
             KM+S GLLPN VTYTTLVDIYGQSGRFNDAIECLE MKSAGLKPS+TMYNALINAYAQR
Sbjct: 535  GKMRSLGLLPNAVTYTTLVDIYGQSGRFNDAIECLEDMKSAGLKPSSTMYNALINAYAQR 594

Query: 763  GLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENDVKPDVVTY 584
            GLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAF+VLQYMKEND+KPDVVTY
Sbjct: 595  GLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTY 654

Query: 583  TTLMKALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTIK 434
            TTLMKALIRVDKF +VP+VYEEMIL+GC PD KARAMLRSALRYMKQT+K
Sbjct: 655  TTLMKALIRVDKFQKVPSVYEEMILAGCIPDSKARAMLRSALRYMKQTLK 704


>gb|KHG22213.1| hypothetical protein F383_28108 [Gossypium arboreum]
          Length = 706

 Score = 1049 bits (2713), Expect = 0.0
 Identities = 543/716 (75%), Positives = 598/716 (83%), Gaps = 11/716 (1%)
 Frame = -1

Query: 2545 MLLLPLPVPSRFPSIQLASPIIIGRHHHNHIFQPPVSAVATSTSCTHDEAFLSTSNSKRR 2366
            MLLLP P+P RFPSIQL+SPII  R H +H      SA A + +       LS    + R
Sbjct: 1    MLLLPPPLPVRFPSIQLSSPII--RLHFSHHTSLCTSAAAEAAAAAETSITLSFDKERDR 58

Query: 2365 F------DDENDLHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXSEPAKSGSPTSLDPE 2204
                   DDEND+ SL  RRYDF                         + S SPTSLDP 
Sbjct: 59   DRYGDENDDENDVLSLHKRRYDFTPLLNYLSRSNSASD--------SDSDSASPTSLDPI 110

Query: 2203 EFLLAESYRAVPAPLWHXXXXXXXXXXXS-----IGLAYAVVFWLQKHNLCFSYELLYSI 2039
            EF LAESYRAVPAPLWH           S     I LAYAVV WLQ+HNLCFSYELLYSI
Sbjct: 111  EFQLAESYRAVPAPLWHSLLKSLCASSSSSSSSSINLAYAVVSWLQRHNLCFSYELLYSI 170

Query: 2038 LIHALGRSEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQSDF 1859
            LIHALGRSEKLYEAFLLSQRQ+LT LTYNALI ACARN+DLEKALNLMSRMRQDG+QSDF
Sbjct: 171  LIHALGRSEKLYEAFLLSQRQSLTPLTYNALINACARNDDLEKALNLMSRMRQDGYQSDF 230

Query: 1858 VNYSLVIQSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAMHFL 1679
            VNYSL+IQSLTR NKI+S LLQKLY EIE D+IE+DGQLLNDIIVGFAKA DP+RA+ FL
Sbjct: 231  VNYSLIIQSLTRNNKIDSSLLQKLYGEIECDRIEVDGQLLNDIIVGFAKANDPSRALKFL 290

Query: 1678 AAAQAIGLSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGYVKA 1499
            A AQAIGLSP+TATLVAVI +LG  GR  EAE +FEE+K  GLKPRTRAYNALLKGYVK+
Sbjct: 291  AMAQAIGLSPKTATLVAVIYSLGCCGRIAEAEAVFEEMKGSGLKPRTRAYNALLKGYVKS 350

Query: 1498 GSLKDAESIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVF 1319
            GSLKDAE +VSEME++GV+PD+HTYSLLIDAY+NAGRWESARIVLKEMEA+NV+PNS+V+
Sbjct: 351  GSLKDAELVVSEMERSGVSPDEHTYSLLIDAYSNAGRWESARIVLKEMEANNVKPNSFVY 410

Query: 1318 SRILASYRDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDRMLS 1139
            SRILASYR++GEWQ++FQVL+EMK +G++PDRHFYNVMIDTFGKYNCLDHAMATFDRMLS
Sbjct: 411  SRILASYRNKGEWQRSFQVLKEMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMATFDRMLS 470

Query: 1138 EGIQPDTVTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQERWDD 959
            EGI+PDTVTWNTLIDCHCK+G H RAE+LFEEM E G SPC TTYNIMINS GEQERWDD
Sbjct: 471  EGIEPDTVTWNTLIDCHCKAGWHDRAEQLFEEMKEKGYSPCTTTYNIMINSLGEQERWDD 530

Query: 958  VKGLLVKMQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNALIN 779
            VK LL KMQ +GLLPN+VTYTTLVDIYG+SGRF+DAIECLE+MKSAGLKPS+TMYNALIN
Sbjct: 531  VKSLLGKMQGEGLLPNIVTYTTLVDIYGKSGRFSDAIECLELMKSAGLKPSSTMYNALIN 590

Query: 778  AYAQRGLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENDVKP 599
            AYAQRGLSEQA+NA RVM ADGLKP+LLALNSLINAFGEDRRD EAFAVLQYMKEN +KP
Sbjct: 591  AYAQRGLSEQAMNALRVMGADGLKPNLLALNSLINAFGEDRRDVEAFAVLQYMKENGLKP 650

Query: 598  DVVTYTTLMKALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTIKS 431
            DVVTYTTLMKALIRVDKFH+VPAVYEEMILSGCTPDRKARAMLRSALRYMKQ +KS
Sbjct: 651  DVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRYMKQAVKS 706


>ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Vitis vinifera]
            gi|297745544|emb|CBI40709.3| unnamed protein product
            [Vitis vinifera]
          Length = 695

 Score = 1049 bits (2712), Expect = 0.0
 Identities = 538/705 (76%), Positives = 587/705 (83%)
 Frame = -1

Query: 2545 MLLLPLPVPSRFPSIQLASPIIIGRHHHNHIFQPPVSAVATSTSCTHDEAFLSTSNSKRR 2366
            MLLLP P+P+RFPS    SP++  R H   I QPP+ A  ++   T        S     
Sbjct: 1    MLLLPAPLPTRFPSYHFLSPVL--RDHR--ILQPPLLATTSAAVTTASGEASQFSKPLNE 56

Query: 2365 FDDENDLHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXSEPAKSGSPTSLDPEEFLLAE 2186
            +    DL+S+ NRRYDF                          +S  PTSLD  EF L E
Sbjct: 57   YGSSGDLNSVPNRRYDFTPLLRFLSNSESDSDSGAE------VESPPPTSLDFTEFQLVE 110

Query: 2185 SYRAVPAPLWHXXXXXXXXXXXSIGLAYAVVFWLQKHNLCFSYELLYSILIHALGRSEKL 2006
            SYRAVPAPLWH           SIG AY++V WL++HNLCFSYELLYSILIHALGRSEKL
Sbjct: 111  SYRAVPAPLWHSLLKSLCSDSSSIGTAYSLVTWLERHNLCFSYELLYSILIHALGRSEKL 170

Query: 2005 YEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFVNYSLVIQSLT 1826
            YEAFLLSQRQTLT LTYNALIGACARN+DLEKALNLMSRMR+DGF SDFVNYS +IQSLT
Sbjct: 171  YEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLT 230

Query: 1825 RTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAMHFLAAAQAIGLSPR 1646
            RTNK +S +LQK+Y EIE+DKIELDGQLLNDIIVGFAK+GD NRAM FLA  Q  GLSP+
Sbjct: 231  RTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPK 290

Query: 1645 TATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGYVKAGSLKDAESIVS 1466
            TATLVAVI ALGN+GRT EAE IFEE+KEGGL PRTRAYNALLKGYVK GSLKDAESIVS
Sbjct: 291  TATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVS 350

Query: 1465 EMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRG 1286
            EME++G +PD+HTYSLLIDAYANAGRWESARIVLKEMEAS V+PNSYVFSRILASYRDRG
Sbjct: 351  EMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRG 410

Query: 1285 EWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEGIQPDTVTWN 1106
            +WQK+FQVLREM++SGV PDRHFYNVMIDTFGK NCLDHA+ATFDRM  EG+QPD VTWN
Sbjct: 411  KWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWN 470

Query: 1105 TLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQERWDDVKGLLVKMQSQ 926
            TLIDCHCKSG H +AEELFE M ESGCSPC TTYNIMINSFGEQERW+DVK LL KMQSQ
Sbjct: 471  TLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQ 530

Query: 925  GLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNALINAYAQRGLSEQA 746
            GLL NVVTYTTLVDIYGQSGRF DAIECLEVMKS GLKPS+TMYNALINAYAQRGLSEQA
Sbjct: 531  GLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQA 590

Query: 745  VNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENDVKPDVVTYTTLMKA 566
            +NAFRVMRADGLKPS+L LNSLINAFGEDRRDAEAF+VLQYMKEND+KPDVVTYTTLMKA
Sbjct: 591  INAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKA 650

Query: 565  LIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTIKS 431
            LIRV+KF +VPAVYEEM LSGCTPDRKARAMLRSALRYM++T+KS
Sbjct: 651  LIRVEKFDKVPAVYEEMTLSGCTPDRKARAMLRSALRYMERTLKS 695


>ref|XP_012464758.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X2 [Gossypium raimondii]
            gi|763746834|gb|KJB14273.1| hypothetical protein
            B456_002G117100 [Gossypium raimondii]
          Length = 701

 Score = 1047 bits (2707), Expect = 0.0
 Identities = 544/714 (76%), Positives = 597/714 (83%), Gaps = 9/714 (1%)
 Frame = -1

Query: 2545 MLLLPLPVPSRFPSIQLASPIIIGRHHHNHIFQPPVSAVATSTSCTHDEAFLSTSNSKRR 2366
            MLLLP  +P RFPSIQL+SPII  R H +H      SA A  TS T           + R
Sbjct: 1    MLLLPPTLPVRFPSIQLSSPII--RLHFSHHTSLCTSAAAAETSITLS---FDKERDRDR 55

Query: 2365 F----DDENDLHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXSEPAKSGSPTSLDPEEF 2198
            +    DDEND+ SL  RRYDF                         + S SPTSLDP EF
Sbjct: 56   YGDENDDENDVLSLHKRRYDFTPLLNYLSRSNSASDLD--------SDSASPTSLDPIEF 107

Query: 2197 LLAESYRAVPAPLWHXXXXXXXXXXXS-----IGLAYAVVFWLQKHNLCFSYELLYSILI 2033
             LAESYRAVPAPLWH           S     I LAYAVV WLQ+HNLCFSYELLYSILI
Sbjct: 108  QLAESYRAVPAPLWHSLLKSLCASSSSSSSSSINLAYAVVSWLQRHNLCFSYELLYSILI 167

Query: 2032 HALGRSEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFVN 1853
            HALGRSEKLYEAFLLSQRQ+LT LTYNALI ACARN+DLEKALNLMSRMRQDG+QSDFVN
Sbjct: 168  HALGRSEKLYEAFLLSQRQSLTPLTYNALINACARNDDLEKALNLMSRMRQDGYQSDFVN 227

Query: 1852 YSLVIQSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAMHFLAA 1673
            YSL+IQSLTR NKI+S LLQKLY EIE D+IE+DGQLLNDIIVGFAKA DP+RA+ FLA 
Sbjct: 228  YSLIIQSLTRNNKIDSSLLQKLYGEIECDRIEVDGQLLNDIIVGFAKANDPSRALKFLAM 287

Query: 1672 AQAIGLSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGYVKAGS 1493
            AQAIGLSP+TATLVAVI +LG  GR  EAE +FEE+K  GLKPRTRAYNALLKGYVK+GS
Sbjct: 288  AQAIGLSPKTATLVAVIYSLGCCGRIAEAEAVFEEMKGSGLKPRTRAYNALLKGYVKSGS 347

Query: 1492 LKDAESIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSR 1313
            LKDAE +VSEME++GV+PD+HTYSLLIDAY+NAGRWESARIVLKEMEA+NV+PNS+V+SR
Sbjct: 348  LKDAELVVSEMERSGVSPDEHTYSLLIDAYSNAGRWESARIVLKEMEANNVKPNSFVYSR 407

Query: 1312 ILASYRDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEG 1133
            ILASYR++GEWQ++FQVL+EMK +G++PDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEG
Sbjct: 408  ILASYRNKGEWQRSFQVLKEMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEG 467

Query: 1132 IQPDTVTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQERWDDVK 953
            I+PDTVTWNTLIDCHCK+G H RAE+LFEEM E G SPC TTYNIMINS GEQERWDDVK
Sbjct: 468  IEPDTVTWNTLIDCHCKAGWHDRAEQLFEEMKEKGYSPCTTTYNIMINSLGEQERWDDVK 527

Query: 952  GLLVKMQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNALINAY 773
             LL KMQ +GLLPN+VTYTTLVDIYG+SGRF+DAIECLE+MKSAGLKPS+TMYNALINAY
Sbjct: 528  SLLGKMQGEGLLPNIVTYTTLVDIYGKSGRFSDAIECLELMKSAGLKPSSTMYNALINAY 587

Query: 772  AQRGLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENDVKPDV 593
            AQRGLSEQA+NA RVM ADGLKP+LLALNSLINAFGEDRRD EAFAVLQYMKEN VKPDV
Sbjct: 588  AQRGLSEQAMNALRVMGADGLKPNLLALNSLINAFGEDRRDVEAFAVLQYMKENGVKPDV 647

Query: 592  VTYTTLMKALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTIKS 431
            VTYTTLMKALIRVDKFH+VPAVYEEMILSGCTPDRKARAMLRSALRYMKQ +KS
Sbjct: 648  VTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRYMKQAVKS 701


>ref|XP_007018011.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 2,
            partial [Theobroma cacao] gi|508723339|gb|EOY15236.1|
            Pentatricopeptide repeat (PPR-like) superfamily protein
            isoform 2, partial [Theobroma cacao]
          Length = 698

 Score = 1046 bits (2706), Expect = 0.0
 Identities = 542/712 (76%), Positives = 599/712 (84%), Gaps = 13/712 (1%)
 Frame = -1

Query: 2527 PVPSRFPSIQLASPIIIGRHHHNHIFQPPVSAVATSTSCTHDEAFLSTSNSKR----RFD 2360
            P+P+RFPSIQL+SPI         +     +++ T+ + T  EA +S S  K     R+D
Sbjct: 2    PLPARFPSIQLSSPI-------TRLHVSLQTSIYTAAAATAAEASISLSIDKDKDRDRYD 54

Query: 2359 DEND----LHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXSEPAKSGSPTSLDPEEFLL 2192
            DE+D    + S+  RRYDF                         + S SPTSLDP EF L
Sbjct: 55   DEDDDQSDVLSIHKRRYDFTPLLNYLSSSNSEPD--------SDSDSASPTSLDPIEFQL 106

Query: 2191 AESYRAVPAPLWHXXXXXXXXXXXS-----IGLAYAVVFWLQKHNLCFSYELLYSILIHA 2027
            AESYRAVPAPLWH           S     I LAYAVV WLQ+HNLCFSYELLYSILIHA
Sbjct: 107  AESYRAVPAPLWHSLLKSMCSSSSSSSSSSINLAYAVVSWLQRHNLCFSYELLYSILIHA 166

Query: 2026 LGRSEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFVNYS 1847
            LGRSEKLYEAFLLSQRQTLT LTYNALI ACARNNDLEKALNLMSRMRQDG+QSDFVNYS
Sbjct: 167  LGRSEKLYEAFLLSQRQTLTPLTYNALINACARNNDLEKALNLMSRMRQDGYQSDFVNYS 226

Query: 1846 LVIQSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAMHFLAAAQ 1667
            L+IQSLTR+NKI+S LLQKLY EIE DKIE+DGQLLNDIIVGFAKA DP+ A+ FLA AQ
Sbjct: 227  LIIQSLTRSNKIDSSLLQKLYGEIECDKIEVDGQLLNDIIVGFAKANDPSHALKFLAMAQ 286

Query: 1666 AIGLSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGYVKAGSLK 1487
            AIGL+P+TATLVAVI +LG  GR  EAE +FEE+K  GLKPRTRAYNALLKGYVKAGSLK
Sbjct: 287  AIGLNPKTATLVAVIYSLGCCGRIAEAEAVFEEMKGTGLKPRTRAYNALLKGYVKAGSLK 346

Query: 1486 DAESIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRIL 1307
            DAE +VSEME++GV+PD+HTYSLLIDAYANAGRWESARIVLKEMEA+NVQPNS+V+SRIL
Sbjct: 347  DAELVVSEMERSGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEANNVQPNSFVYSRIL 406

Query: 1306 ASYRDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEGIQ 1127
            ASYR++GEWQ++FQVLREMK +G++PDRHFYNVMIDTFGKYNCLDHAM TFDRMLSEGI+
Sbjct: 407  ASYRNKGEWQRSFQVLREMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMDTFDRMLSEGIK 466

Query: 1126 PDTVTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQERWDDVKGL 947
            PDTVTWNTLIDCHCK+GRH RAEELFEEM ESG SPC TTYNIMINSFG QERWD+VK L
Sbjct: 467  PDTVTWNTLIDCHCKAGRHGRAEELFEEMKESGYSPCTTTYNIMINSFGGQERWDNVKSL 526

Query: 946  LVKMQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNALINAYAQ 767
            L KMQSQGLLPN+VTYTTLVDIYG+SGRF+DA+ECLE+MKSAGLKPS TMYNALINAYAQ
Sbjct: 527  LGKMQSQGLLPNIVTYTTLVDIYGKSGRFSDAMECLELMKSAGLKPSLTMYNALINAYAQ 586

Query: 766  RGLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENDVKPDVVT 587
            RGLSEQA+NA R+MRADGLKP+LLALNSLINAFGEDRRD EAFAVLQYMKENDVKPDVVT
Sbjct: 587  RGLSEQAINALRIMRADGLKPNLLALNSLINAFGEDRRDVEAFAVLQYMKENDVKPDVVT 646

Query: 586  YTTLMKALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTIKS 431
            YTTLMK+LIRVDKFH+VPAVYEEMILSGCTPDRKARAMLRSALRYMKQ +KS
Sbjct: 647  YTTLMKSLIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRYMKQKVKS 698


>ref|XP_012464747.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X1 [Gossypium raimondii]
            gi|823132894|ref|XP_012464753.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X1 [Gossypium raimondii]
          Length = 709

 Score = 1040 bits (2688), Expect = 0.0
 Identities = 544/722 (75%), Positives = 597/722 (82%), Gaps = 17/722 (2%)
 Frame = -1

Query: 2545 MLLLPLPVPSRFPSIQLASPIIIGRHHHNHIFQPPVSAVATSTSCTHDEAFLSTSNSKRR 2366
            MLLLP  +P RFPSIQL+SPII  R H +H      SA A  TS T           + R
Sbjct: 1    MLLLPPTLPVRFPSIQLSSPII--RLHFSHHTSLCTSAAAAETSITLS---FDKERDRDR 55

Query: 2365 F----DDENDLHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXSEPAKSGSPTSLDPEEF 2198
            +    DDEND+ SL  RRYDF                         + S SPTSLDP EF
Sbjct: 56   YGDENDDENDVLSLHKRRYDFTPLLNYLSRSNSASDLD--------SDSASPTSLDPIEF 107

Query: 2197 LLAESYRAVPAPLWHXXXXXXXXXXXS-----IGLAYAVVFWLQKHNLCFSYELLYSILI 2033
             LAESYRAVPAPLWH           S     I LAYAVV WLQ+HNLCFSYELLYSILI
Sbjct: 108  QLAESYRAVPAPLWHSLLKSLCASSSSSSSSSINLAYAVVSWLQRHNLCFSYELLYSILI 167

Query: 2032 HALGRSEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFVN 1853
            HALGRSEKLYEAFLLSQRQ+LT LTYNALI ACARN+DLEKALNLMSRMRQDG+QSDFVN
Sbjct: 168  HALGRSEKLYEAFLLSQRQSLTPLTYNALINACARNDDLEKALNLMSRMRQDGYQSDFVN 227

Query: 1852 YSLVIQSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAMHFLAA 1673
            YSL+IQSLTR NKI+S LLQKLY EIE D+IE+DGQLLNDIIVGFAKA DP+RA+ FLA 
Sbjct: 228  YSLIIQSLTRNNKIDSSLLQKLYGEIECDRIEVDGQLLNDIIVGFAKANDPSRALKFLAM 287

Query: 1672 AQAIGLSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGYVKAGS 1493
            AQAIGLSP+TATLVAVI +LG  GR  EAE +FEE+K  GLKPRTRAYNALLKGYVK+GS
Sbjct: 288  AQAIGLSPKTATLVAVIYSLGCCGRIAEAEAVFEEMKGSGLKPRTRAYNALLKGYVKSGS 347

Query: 1492 LKDAESIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSR 1313
            LKDAE +VSEME++GV+PD+HTYSLLIDAY+NAGRWESARIVLKEMEA+NV+PNS+V+SR
Sbjct: 348  LKDAELVVSEMERSGVSPDEHTYSLLIDAYSNAGRWESARIVLKEMEANNVKPNSFVYSR 407

Query: 1312 ILASYRDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEG 1133
            ILASYR++GEWQ++FQVL+EMK +G++PDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEG
Sbjct: 408  ILASYRNKGEWQRSFQVLKEMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEG 467

Query: 1132 IQPDTVTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQERWDDVK 953
            I+PDTVTWNTLIDCHCK+G H RAE+LFEEM E G SPC TTYNIMINS GEQERWDDVK
Sbjct: 468  IEPDTVTWNTLIDCHCKAGWHDRAEQLFEEMKEKGYSPCTTTYNIMINSLGEQERWDDVK 527

Query: 952  GLLVKMQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNALINAY 773
             LL KMQ +GLLPN+VTYTTLVDIYG+SGRF+DAIECLE+MKSAGLKPS+TMYNALINAY
Sbjct: 528  SLLGKMQGEGLLPNIVTYTTLVDIYGKSGRFSDAIECLELMKSAGLKPSSTMYNALINAY 587

Query: 772  AQRGLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENDVKPDV 593
            AQRGLSEQA+NA RVM ADGLKP+LLALNSLINAFGEDRRD EAFAVLQYMKEN VKPDV
Sbjct: 588  AQRGLSEQAMNALRVMGADGLKPNLLALNSLINAFGEDRRDVEAFAVLQYMKENGVKPDV 647

Query: 592  VTYTTLMKALIRVDKFH--------EVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTI 437
            VTYTTLMKALIRVDKFH        +VPAVYEEMILSGCTPDRKARAMLRSALRYMKQ +
Sbjct: 648  VTYTTLMKALIRVDKFHKILCVVWIKVPAVYEEMILSGCTPDRKARAMLRSALRYMKQAV 707

Query: 436  KS 431
            KS
Sbjct: 708  KS 709


>ref|XP_010266137.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X1 [Nelumbo nucifera]
            gi|720032527|ref|XP_010266139.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial isoform X1 [Nelumbo nucifera]
          Length = 691

 Score = 1039 bits (2687), Expect = 0.0
 Identities = 534/704 (75%), Positives = 590/704 (83%)
 Frame = -1

Query: 2545 MLLLPLPVPSRFPSIQLASPIIIGRHHHNHIFQPPVSAVATSTSCTHDEAFLSTSNSKRR 2366
            MLLLP   P+RFPSI + SP +  RHHH   F P       +T+ T      +TS+S   
Sbjct: 1    MLLLPPLPPTRFPSINVFSPNL--RHHH---FFPLPPITLFTTAVTSATTIATTSSS--- 52

Query: 2365 FDDENDLHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXSEPAKSGSPTSLDPEEFLLAE 2186
             D+ N LH   NRRYDF                      S+   + SPTSLDP E  LAE
Sbjct: 53   LDNCNSLH---NRRYDFDPLIRFLSSTTAYSTTSDTDSDSD---TDSPTSLDPIELRLAE 106

Query: 2185 SYRAVPAPLWHXXXXXXXXXXXSIGLAYAVVFWLQKHNLCFSYELLYSILIHALGRSEKL 2006
            SYRAVPAPLWH           ++  AYA+V WLQ+HNLCFSYELLYSILIHALGRS+KL
Sbjct: 107  SYRAVPAPLWHSLLKSLCSSPSTLETAYALVSWLQRHNLCFSYELLYSILIHALGRSDKL 166

Query: 2005 YEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFVNYSLVIQSLT 1826
            YEAFLLSQRQ LT LTYNALIGACARN+DLEKALNLMSRMR+DG+QSDFVNYSL+IQSLT
Sbjct: 167  YEAFLLSQRQILTPLTYNALIGACARNDDLEKALNLMSRMRRDGYQSDFVNYSLIIQSLT 226

Query: 1825 RTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAMHFLAAAQAIGLSPR 1646
            RTNK++S +LQKLY E+E DKIELDGQLLND+IV FAKAGDP+RAM FLA  Q  GLSP+
Sbjct: 227  RTNKVDSSVLQKLYGEMETDKIELDGQLLNDLIVAFAKAGDPDRAMFFLAMVQGQGLSPK 286

Query: 1645 TATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGYVKAGSLKDAESIVS 1466
            TATLVAVI ALGN GRT EAE IFEE+KEGGLKPRTRAYNALLKGYVK GSL+DAESIVS
Sbjct: 287  TATLVAVIAALGNLGRTEEAEAIFEEMKEGGLKPRTRAYNALLKGYVKTGSLRDAESIVS 346

Query: 1465 EMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRG 1286
            EME+ G++PD+HTYSLLIDAYANAGRWESARIVLKEMEA+NVQPNSYVFSRILASYRDRG
Sbjct: 347  EMERGGLSPDEHTYSLLIDAYANAGRWESARIVLKEMEANNVQPNSYVFSRILASYRDRG 406

Query: 1285 EWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEGIQPDTVTWN 1106
            EWQK+F VL+EM+ SGVRPDRHFYNVMIDTFGKYNCL+H MATF+RM  +GIQPDTVTWN
Sbjct: 407  EWQKSFSVLKEMRSSGVRPDRHFYNVMIDTFGKYNCLEHTMATFERMQLDGIQPDTVTWN 466

Query: 1105 TLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQERWDDVKGLLVKMQSQ 926
            TLIDCHCKSGRH RAEELF+ M ESGC PC TTYNIMINS GEQE+W++VK LL KMQSQ
Sbjct: 467  TLIDCHCKSGRHDRAEELFQAMQESGCLPCTTTYNIMINSLGEQEKWEEVKSLLGKMQSQ 526

Query: 925  GLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNALINAYAQRGLSEQA 746
            GLLPNVVTYTTL+DIYGQSGRF DAIECLE MKSAGLKPS TMY+AL+NAYAQRGLSEQA
Sbjct: 527  GLLPNVVTYTTLIDIYGQSGRFKDAIECLEAMKSAGLKPSPTMYHALVNAYAQRGLSEQA 586

Query: 745  VNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENDVKPDVVTYTTLMKA 566
            VNAFRVMRADGLKPS+L LNSLINAFGEDRRD EAFAVLQYMKEND++PDVVTYTTLMKA
Sbjct: 587  VNAFRVMRADGLKPSVLVLNSLINAFGEDRRDTEAFAVLQYMKENDLQPDVVTYTTLMKA 646

Query: 565  LIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTIK 434
            LIRV+KF +VPA+YE+MILSGCTPDRKARAMLRSALRYM+QT++
Sbjct: 647  LIRVEKFEKVPAIYEDMILSGCTPDRKARAMLRSALRYMRQTLR 690


>ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223551364|gb|EEF52850.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score = 1037 bits (2682), Expect = 0.0
 Identities = 530/704 (75%), Positives = 594/704 (84%), Gaps = 1/704 (0%)
 Frame = -1

Query: 2545 MLLLPLPVPSRFPSIQLASPIIIGRHHHNHIFQPPVSAVATS-TSCTHDEAFLSTSNSKR 2369
            MLL P P  +RFPSI +  PI + RH+H+H   PP+SA  TS T+     + LS S    
Sbjct: 1    MLLFPPPPATRFPSITVTCPIPV-RHYHHHSQLPPLSATNTSATAIASSFSNLSLSLDNN 59

Query: 2368 RFDDENDLHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXSEPAKSGSPTSLDPEEFLLA 2189
            + D E D+ +L++RRYDF                        P  S SPTSLD  EF LA
Sbjct: 60   QKDTEQDILALQSRRYDFTPLLNFLSNQIKA----------SPNTSSSPTSLDTTEFQLA 109

Query: 2188 ESYRAVPAPLWHXXXXXXXXXXXSIGLAYAVVFWLQKHNLCFSYELLYSILIHALGRSEK 2009
            ESYRAVP PLWH           SIGLAYAVV WLQKHNLCFSYELLYSILIHALGRSEK
Sbjct: 110  ESYRAVPGPLWHSLLKSLSSSSSSIGLAYAVVSWLQKHNLCFSYELLYSILIHALGRSEK 169

Query: 2008 LYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFVNYSLVIQSL 1829
            LYEAFLLSQ+Q L+ LTYNALI ACARNNDLEKA+NL+SRMRQDG+ SDFVNYSL+IQSL
Sbjct: 170  LYEAFLLSQQQALSPLTYNALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSL 229

Query: 1828 TRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAMHFLAAAQAIGLSP 1649
             R+N+I+SP+LQKLY EI+ DK+ELD QL NDIIVGFAKAGDPN+AM FL   QA GLSP
Sbjct: 230  VRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSP 289

Query: 1648 RTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGYVKAGSLKDAESIV 1469
            RTATL+AVI ALG+SGR +EAE IFEE+K+ GLKP+TRAYN LLKGYVKAG LKDAE IV
Sbjct: 290  RTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIV 349

Query: 1468 SEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDR 1289
            SEME++GV+PD+ TYSLLIDAY+NAGRWESARIVLKEMEA+N+ PNSYVFSRILASYRDR
Sbjct: 350  SEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDR 409

Query: 1288 GEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEGIQPDTVTW 1109
            GEWQK+FQVL+EMK+SGVRPDRHFYNVMIDTFGK++CLDHAM TFD+MLSEGIQPDTVTW
Sbjct: 410  GEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTW 469

Query: 1108 NTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQERWDDVKGLLVKMQS 929
            NTLIDCHCK+  H RAEELFEEM E G SPC TT+NIMINSFGEQERWDDVK L+  M+S
Sbjct: 470  NTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRS 529

Query: 928  QGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNALINAYAQRGLSEQ 749
             GLLPNVVTYTTL+DIYG+SGRF+DAIECLE MKSAGLKPS+TMYNALINAYAQ+GLSEQ
Sbjct: 530  LGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQ 589

Query: 748  AVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENDVKPDVVTYTTLMK 569
            AVNAFR+MRAD LKPSLLALNSLINAFGEDRRDAEAF+VL+YMKEND+KPDVVTYTTLMK
Sbjct: 590  AVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMK 649

Query: 568  ALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTI 437
            ALIRVDKF++VP+VYEEMIL+GCTPDRKARAMLRSAL+YMKQT+
Sbjct: 650  ALIRVDKFNKVPSVYEEMILAGCTPDRKARAMLRSALKYMKQTL 693


>ref|XP_002306972.1| hypothetical protein POPTR_0005s27160g [Populus trichocarpa]
            gi|222856421|gb|EEE93968.1| hypothetical protein
            POPTR_0005s27160g [Populus trichocarpa]
          Length = 709

 Score = 1031 bits (2666), Expect = 0.0
 Identities = 525/712 (73%), Positives = 592/712 (83%), Gaps = 8/712 (1%)
 Frame = -1

Query: 2545 MLLLPLPVPSRFPSIQLASPIIIGRHHHNH--IFQPPVSAVATSTSCTHDEAFLS----- 2387
            MLL P P+P+RFPS+   SPI+   HHH+H  IFQPP SA +T+T+        S     
Sbjct: 1    MLLFPPPLPNRFPSVYTTSPIVHHHHHHHHHLIFQPPFSATSTTTNFADSSLSYSKRLHY 60

Query: 2386 -TSNSKRRFDDENDLHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXSEPAKSGSPTSLD 2210
             + N    F D+ D+  L++RRYDF                         + S SPTSLD
Sbjct: 61   ASQNDIEGFSDD-DVLPLQSRRYDFTPLLDYLSKKITTSTDTDSD---SDSASSSPTSLD 116

Query: 2209 PEEFLLAESYRAVPAPLWHXXXXXXXXXXXSIGLAYAVVFWLQKHNLCFSYELLYSILIH 2030
            P EF LAESYR VP PLWH           SIGLAYAVV WLQKHNLCFSYELLYSILIH
Sbjct: 117  PTEFQLAESYRVVPGPLWHSLLKSLCTSSSSIGLAYAVVLWLQKHNLCFSYELLYSILIH 176

Query: 2029 ALGRSEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFVNY 1850
            ALG+SEKLYEAFLLSQRQ LT LTYNALI ACARNNDLEKALNL++RMRQDG+ SDFVNY
Sbjct: 177  ALGQSEKLYEAFLLSQRQNLTPLTYNALISACARNNDLEKALNLITRMRQDGYPSDFVNY 236

Query: 1849 SLVIQSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAMHFLAAA 1670
            SL+I+SL R N+++S +LQKLYREIE DK+ELD QL NDIIVGFAKAGD ++A+ FL   
Sbjct: 237  SLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVV 296

Query: 1669 QAIGLSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGYVKAGSL 1490
            Q  GLS +TATLVAVI ALGN GRTVEAE IFEE+++ GLKPRTRAYNALL+GYVKAG L
Sbjct: 297  QGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLL 356

Query: 1489 KDAESIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRI 1310
            KDAE +VSEME++GV+P++ TYS LIDAY NAGRWESARIVLKEMEASNVQPN+YVFSRI
Sbjct: 357  KDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRI 416

Query: 1309 LASYRDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEGI 1130
            L+SYRD+GEWQK+FQVLREM++SGVRPDR FYNVMIDTFGK+NCLDHAMATFDRMLSEGI
Sbjct: 417  LSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGI 476

Query: 1129 QPDTVTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQERWDDVKG 950
            +PDTVTWNTLIDCHC++G+H RAEELFEEM E G SPC TT+NIMINSFG+QERWDDVK 
Sbjct: 477  EPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKN 536

Query: 949  LLVKMQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNALINAYA 770
            LL  M+SQGL+PN VTYTTL+DIYG+SGRFNDAIECL+ MK+AGLKPS+TMYNALINAYA
Sbjct: 537  LLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYA 596

Query: 769  QRGLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENDVKPDVV 590
            QRGLSEQAV+AFR MR DGLKPSLLALNSLINAFGEDRRDAEAF VLQYMKEND+KPDVV
Sbjct: 597  QRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVV 656

Query: 589  TYTTLMKALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTIK 434
            TYTTLMKALIRV+KF +VP+VYEEMILSGCTPDRKARAMLRSAL+YMKQT++
Sbjct: 657  TYTTLMKALIRVEKFDKVPSVYEEMILSGCTPDRKARAMLRSALKYMKQTLE 708


>ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Cucumis sativus]
            gi|700192341|gb|KGN47545.1| hypothetical protein
            Csa_6G358090 [Cucumis sativus]
          Length = 720

 Score = 1026 bits (2652), Expect = 0.0
 Identities = 525/717 (73%), Positives = 589/717 (82%), Gaps = 14/717 (1%)
 Frame = -1

Query: 2545 MLLLPLPVPSRFPSIQLASPIIIGRHHHN-HIFQPPVSAVATSTSCTHDEAFLS--TSNS 2375
            +LL PLP+ +RFP+  L+SP +   HHHN HI    +S    S   T   + ++  TS+ 
Sbjct: 2    LLLSPLPLSTRFPATHLSSPPVFLHHHHNPHIATTHLSFSFFSAPATSSSSLVTCYTSSD 61

Query: 2374 KRRFDD-ENDLHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXS----------EPAKSG 2228
               FD  END  SL++RRYDF                                   + + 
Sbjct: 62   NLEFDVFENDPVSLQSRRYDFTPLLDFLSRSSAYPKFDSDSDSEVEFDSTFNSGSDSDTA 121

Query: 2227 SPTSLDPEEFLLAESYRAVPAPLWHXXXXXXXXXXXSIGLAYAVVFWLQKHNLCFSYELL 2048
            SPTSLDP EF LAE+YRAVPAPLWH           SIGL YAVV WLQ+HNLCFSYELL
Sbjct: 122  SPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQRHNLCFSYELL 181

Query: 2047 YSILIHALGRSEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQ 1868
            YSILIHALGRSEKLYEAF+LSQ+QTLT LTYNALIGACARNNDLEKALNLMSRMRQDGFQ
Sbjct: 182  YSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQ 241

Query: 1867 SDFVNYSLVIQSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAM 1688
            SDF+NYSL+IQSLTRTNKI+ PLLQKLY EIE+DKIELDG LLNDII+GFAKAGDPNRA+
Sbjct: 242  SDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRAL 301

Query: 1687 HFLAAAQAIGLSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGY 1508
            +FL+  QA GL+P+T+T VAVI ALGN GRT EAE IFEE+KEGGLKPR +A+NALLKGY
Sbjct: 302  YFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 361

Query: 1507 VKAGSLKDAESIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNS 1328
             + GSLK+AESI+SEMEK+G++PD+HTY LL+DAYAN GRWESAR +LK+MEA NVQPN+
Sbjct: 362  ARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNT 421

Query: 1327 YVFSRILASYRDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDR 1148
            ++FSRILASYRDRGEWQKTF+VLREMK+S V+PDRHFYNVMIDTFGK+NCLDHAM T+DR
Sbjct: 422  FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDR 481

Query: 1147 MLSEGIQPDTVTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQER 968
            MLSEGI+PD VTWNTLIDCH K G H RA ELFEEM E G  PC TTYNIMINS GEQE+
Sbjct: 482  MLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEK 541

Query: 967  WDDVKGLLVKMQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNA 788
            WD+VK LL KMQSQGLLPNVVTYTTLVDIYG SGRFNDAI+CLE MKSAGLKPS TMYNA
Sbjct: 542  WDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNA 601

Query: 787  LINAYAQRGLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKEND 608
            LINA+AQRGLSEQAVNA+RVM +DGL+PSLLALNSLINAFGEDRRD EAF++LQYMKEND
Sbjct: 602  LINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKEND 661

Query: 607  VKPDVVTYTTLMKALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTI 437
            VKPDVVTYTTLMKALIRVDKF +VPAVYEEMILSGCTPD KARAMLRSALRYMK+T+
Sbjct: 662  VKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTL 718


>ref|XP_008347337.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like, partial [Malus domestica]
          Length = 597

 Score = 1025 bits (2649), Expect = 0.0
 Identities = 510/597 (85%), Positives = 553/597 (92%), Gaps = 2/597 (0%)
 Frame = -1

Query: 2215 LDPEEFLLAESYRAVPAPLWHXXXXXXXXXXXS--IGLAYAVVFWLQKHNLCFSYELLYS 2042
            LDP EF LA+SYRAV APLWH           S  IGLAYAVV WLQKHNLCFSYELLYS
Sbjct: 1    LDPSEFQLAQSYRAVXAPLWHSLLKSLCASHSSSDIGLAYAVVSWLQKHNLCFSYELLYS 60

Query: 2041 ILIHALGRSEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQSD 1862
            ILIHALGRSEKLYEAFLLSQRQ+LT LTYNALIGACARN DLEKAL+LMSRMRQDG++SD
Sbjct: 61   ILIHALGRSEKLYEAFLLSQRQSLTPLTYNALIGACARNGDLEKALHLMSRMRQDGYRSD 120

Query: 1861 FVNYSLVIQSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAMHF 1682
            FVNYSL+IQSLTR+NKI+SP++ KLYREIE++ IE+DGQL NDII GFAKAG+P++A+H 
Sbjct: 121  FVNYSLIIQSLTRSNKIDSPIMFKLYREIESESIEIDGQLFNDIIAGFAKAGEPSQAVHL 180

Query: 1681 LAAAQAIGLSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGYVK 1502
            LA  QA GLSP+TATLVAVI ALGNSGR VEAE IFEE++EGGL+PRTRAYNALLKGYVK
Sbjct: 181  LAMVQATGLSPKTATLVAVISALGNSGRVVEAEAIFEEMREGGLQPRTRAYNALLKGYVK 240

Query: 1501 AGSLKDAESIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYV 1322
            AG LKDAESIVS+MEK+G++PD+HTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYV
Sbjct: 241  AGQLKDAESIVSQMEKSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYV 300

Query: 1321 FSRILASYRDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDRML 1142
            FSRILASYRDRGEWQK+FQVLREMK SGVRPDRHFYNVMIDTFGK NCLDHAMATF+RML
Sbjct: 301  FSRILASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHAMATFERML 360

Query: 1141 SEGIQPDTVTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQERWD 962
            SEGI PDTVTWNTLIDCHCKSG H RAEELFEEM +SGC+PCATTYNIMINSFGEQ+RWD
Sbjct: 361  SEGIHPDTVTWNTLIDCHCKSGHHVRAEELFEEMQQSGCAPCATTYNIMINSFGEQQRWD 420

Query: 961  DVKGLLVKMQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNALI 782
            +VKGLL KMQSQGLLPN+VTYTTLVDIYG+SGRF DAIECLEVMKSAG+KPS TMYNALI
Sbjct: 421  EVKGLLGKMQSQGLLPNIVTYTTLVDIYGKSGRFTDAIECLEVMKSAGMKPSPTMYNALI 480

Query: 781  NAYAQRGLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENDVK 602
            NAYAQRGLSEQA+NAFRVMRADGLKPS LALNSLINAFGEDRRD EAF+VLQYMKEND+K
Sbjct: 481  NAYAQRGLSEQALNAFRVMRADGLKPSPLALNSLINAFGEDRRDTEAFSVLQYMKENDLK 540

Query: 601  PDVVTYTTLMKALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTIKS 431
            PDVVTYTTLMK LIRVDKF +VPAVYEEMI+SGCTPDRKARAMLRSAL+YMKQT++S
Sbjct: 541  PDVVTYTTLMKTLIRVDKFCKVPAVYEEMIMSGCTPDRKARAMLRSALKYMKQTLRS 597


>ref|XP_008464858.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Cucumis melo]
          Length = 720

 Score = 1024 bits (2648), Expect = 0.0
 Identities = 526/719 (73%), Positives = 591/719 (82%), Gaps = 16/719 (2%)
 Frame = -1

Query: 2545 MLLLPLPVPSRFPSIQLASPIIIGRHHHNHIFQPP-----VSAVATSTSCTHDEAFLSTS 2381
            +LL PLP+ +RFP+  L+SP +   HH+ HI         +SA A +TS +    + S+ 
Sbjct: 2    LLLSPLPLSTRFPATHLSSPAVFLHHHNPHITTTHLSFSFISAAAAATSSSVVTCYTSSD 61

Query: 2380 NSKRRFDD-ENDLHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXS----------EPAK 2234
            N +  FD  E+D  SL++RRYDF                                   + 
Sbjct: 62   NLE--FDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSD 119

Query: 2233 SGSPTSLDPEEFLLAESYRAVPAPLWHXXXXXXXXXXXSIGLAYAVVFWLQKHNLCFSYE 2054
            + SPTSLDP EF LAE+YRAVPAPLWH           SIGL YAVV WLQKHNLCFSYE
Sbjct: 120  TASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYE 179

Query: 2053 LLYSILIHALGRSEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDG 1874
            LLYSILIHALGRSEKLYEAF+LSQ+QTLT LTYNALIGACARNNDLEKALNLMSRMRQDG
Sbjct: 180  LLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDG 239

Query: 1873 FQSDFVNYSLVIQSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNR 1694
            FQSDFVNYSL+IQSLTRTNKI+ P+LQKLY EIE+DKIELDG LLNDII+GFAKAGDPNR
Sbjct: 240  FQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNR 299

Query: 1693 AMHFLAAAQAIGLSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLK 1514
            A++FL+  QA GL+P+T+T VAVI ALGN GRT EAE IFEE+KEGGLKPR +A+NALLK
Sbjct: 300  ALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 359

Query: 1513 GYVKAGSLKDAESIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQP 1334
            GY + GSLK+AESIVSEMEK+G++PD+HTY LL+DAYAN GRWESAR +LK+MEA NVQP
Sbjct: 360  GYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQP 419

Query: 1333 NSYVFSRILASYRDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATF 1154
            N+++FSRILASYRDRGEWQKTF+VLREMK+S V+PDRHFYNVMIDTFGK+NCLDHAM T+
Sbjct: 420  NTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETY 479

Query: 1153 DRMLSEGIQPDTVTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQ 974
            DRMLSEGI+PD VTWNTLIDCH K G H RA ELFEEM E G  PC TTYNIMINS GEQ
Sbjct: 480  DRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQ 539

Query: 973  ERWDDVKGLLVKMQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMY 794
            E+WD+VK LL KMQSQGLLPNVVTYTTLVDIYG SGRFNDAI+CLE MKSAGLKPS TMY
Sbjct: 540  EKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMY 599

Query: 793  NALINAYAQRGLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 614
            NALINA+AQRGLSEQAVNA+RVM +DGL+PSLLALNSLINAFGEDRRD EAF++LQYMKE
Sbjct: 600  NALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKE 659

Query: 613  NDVKPDVVTYTTLMKALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTI 437
            NDVKPDVVTYTTLMKALIRVDKF +VPAVYEEMILSGCTPD KARAMLRSALRYMK+T+
Sbjct: 660  NDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTL 718


>ref|XP_011041249.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Populus euphratica]
          Length = 701

 Score = 1022 bits (2643), Expect = 0.0
 Identities = 523/710 (73%), Positives = 590/710 (83%), Gaps = 6/710 (0%)
 Frame = -1

Query: 2545 MLLLPLPVPSRFPSIQLASPIIIGRHHHNHIFQPPVSAVATSTSCTHDEAFLS------T 2384
            MLL P P+P+R PS+ + SPI     HHN IFQPP+S  +T+ + T      S      +
Sbjct: 1    MLLFPPPLPNRIPSVYITSPIF----HHNLIFQPPLSTTSTTANFTDSSLSYSKRLHYAS 56

Query: 2383 SNSKRRFDDENDLHSLRNRRYDFXXXXXXXXXXXXXXXXXXXXXXSEPAKSGSPTSLDPE 2204
             N    F D+ D+  L++RRYDF                       +PA S SPTSLDP 
Sbjct: 57   QNDIEGFSDD-DVLPLQSRRYDFTPLLDYLSKKITTSTSTDS----DPASS-SPTSLDPT 110

Query: 2203 EFLLAESYRAVPAPLWHXXXXXXXXXXXSIGLAYAVVFWLQKHNLCFSYELLYSILIHAL 2024
            EF LAESYRAVP PLWH           SIGLAYAVV WLQKHNLCFSYELLYSILIHAL
Sbjct: 111  EFQLAESYRAVPGPLWHSLLKSLCTSSSSIGLAYAVVLWLQKHNLCFSYELLYSILIHAL 170

Query: 2023 GRSEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFVNYSL 1844
            G+SEKLYEAFLLSQRQ LT LTYNALI ACARNNDLEKALNL++RMRQDG+ SDFVNYSL
Sbjct: 171  GQSEKLYEAFLLSQRQNLTPLTYNALISACARNNDLEKALNLITRMRQDGYPSDFVNYSL 230

Query: 1843 VIQSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPNRAMHFLAAAQA 1664
            +I+SL R N+++S +LQKLYREIE DK+ELD QL NDIIVGFAKAGD ++A+ FL   Q 
Sbjct: 231  IIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQG 290

Query: 1663 IGLSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALLKGYVKAGSLKD 1484
             GLS +TATLV VI ALGN GRTVEAE IFEE+++ GLKPRTRAYNALL+GYVKAG LKD
Sbjct: 291  SGLSVKTATLVTVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKD 350

Query: 1483 AESIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILA 1304
            AE +VSEME++GV+P++ TYS LIDAY NAGRWESARIVLKEMEASNVQPN+YVFSRIL+
Sbjct: 351  AEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILS 410

Query: 1303 SYRDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMATFDRMLSEGIQP 1124
            SYRD+GEWQK+FQVLREM++SGVRPDR FYNVMIDTFGK+NCLDHAMATFDRMLSEGI+P
Sbjct: 411  SYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEP 470

Query: 1123 DTVTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGEQERWDDVKGLL 944
            DTVTWNTLIDCHC++G+H RAEELFEEM E G SPC TT+NIMINSFG+QERWDDVK LL
Sbjct: 471  DTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLL 530

Query: 943  VKMQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTMYNALINAYAQR 764
              M+SQGL+PN VTYTTL+DIYG+SGRFNDAIECL+ MK+AGLKPS+TMYNALINAYAQR
Sbjct: 531  ANMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQR 590

Query: 763  GLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENDVKPDVVTY 584
            GLSEQAV+AFR MR DGLKPS LALNSLINAFGEDRRDAEAF VLQYMKEND+KPDVVTY
Sbjct: 591  GLSEQAVSAFRAMRVDGLKPSHLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTY 650

Query: 583  TTLMKALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTIK 434
            TTLMKALIRV+KF +VP+VYEEMILSGCTPDRKARAMLRSAL+YMKQT++
Sbjct: 651  TTLMKALIRVEKFDKVPSVYEEMILSGCTPDRKARAMLRSALKYMKQTLE 700


>ref|XP_013462265.1| PPR containing plant-like protein [Medicago truncatula]
            gi|657396184|gb|KEH36300.1| PPR containing plant-like
            protein [Medicago truncatula]
          Length = 685

 Score = 1018 bits (2631), Expect = 0.0
 Identities = 516/683 (75%), Positives = 574/683 (84%)
 Frame = -1

Query: 2479 IGRHHHNHIFQPPVSAVATSTSCTHDEAFLSTSNSKRRFDDENDLHSLRNRRYDFXXXXX 2300
            I RH H+ I QPP SA ++           S++      D  ND+ SL++RRYDF     
Sbjct: 25   IHRHRHHVISQPPPSATSS----------FSSARPIIIDDGPNDILSLQSRRYDFTPLLN 74

Query: 2299 XXXXXXXXXXXXXXXXXSEPAKSGSPTSLDPEEFLLAESYRAVPAPLWHXXXXXXXXXXX 2120
                                  + +  SL P EF LAESYRAVPAPLWH           
Sbjct: 75   FLSTDSTT------------TAAATTNSLSPTEFQLAESYRAVPAPLWHALLKSLCSSSS 122

Query: 2119 SIGLAYAVVFWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLLSQRQTLTALTYNALIG 1940
            SI LAYAVV WLQKHNLCFSYELLYSILIHALGR+EKLYEAFLLSQRQ LT LTYNALIG
Sbjct: 123  SINLAYAVVSWLQKHNLCFSYELLYSILIHALGRNEKLYEAFLLSQRQVLTPLTYNALIG 182

Query: 1939 ACARNNDLEKALNLMSRMRQDGFQSDFVNYSLVIQSLTRTNKINSPLLQKLYREIENDKI 1760
            ACARN DLEKALNLMSRMR+DGFQ DF+NYS +I+SLTR+N+I+SP+LQKLY EIE+DKI
Sbjct: 183  ACARNGDLEKALNLMSRMRRDGFQPDFINYSSIIKSLTRSNRIDSPILQKLYAEIESDKI 242

Query: 1759 ELDGQLLNDIIVGFAKAGDPNRAMHFLAAAQAIGLSPRTATLVAVILALGNSGRTVEAEC 1580
            E DG LLNDII+GF+KAGD  RAMHFLA AQ  GLSP++ TL AVILALGNSGRT+EAE 
Sbjct: 243  EADGHLLNDIILGFSKAGDATRAMHFLAVAQGKGLSPKSGTLAAVILALGNSGRTIEAEA 302

Query: 1579 IFEEIKEGGLKPRTRAYNALLKGYVKAGSLKDAESIVSEMEKNGVAPDDHTYSLLIDAYA 1400
            +FEEIKE GL+PRTRAYNALLKGYVK GSLKDAE +VSEMEK+GV PD+HTYSLL+DAYA
Sbjct: 303  LFEEIKENGLEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKSGVLPDEHTYSLLVDAYA 362

Query: 1399 NAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKTFQVLREMKDSGVRPDRH 1220
            +AGRWESARIVLKEMEASN+QPNS+++SRILASYRD+GEWQK+FQVL+EMK SGV+PDRH
Sbjct: 363  HAGRWESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEMKMSGVQPDRH 422

Query: 1219 FYNVMIDTFGKYNCLDHAMATFDRMLSEGIQPDTVTWNTLIDCHCKSGRHARAEELFEEM 1040
            FYNVMIDTFGKYNCLDHAMATF+RMLSEGI+PDTVTWNTLIDCHCKSGRH+RAEELFEEM
Sbjct: 423  FYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEM 482

Query: 1039 HESGCSPCATTYNIMINSFGEQERWDDVKGLLVKMQSQGLLPNVVTYTTLVDIYGQSGRF 860
             +SG SPC  TYNIMINS G QERW+ V  LL KMQSQGLLPN VTYTTLVDIYG+SGRF
Sbjct: 483  QQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRF 542

Query: 859  NDAIECLEVMKSAGLKPSTTMYNALINAYAQRGLSEQAVNAFRVMRADGLKPSLLALNSL 680
            NDAIECLEV+KS G KP++TMYNALINAYAQRGLS+QAVNAFR+M A+GL PSLLALNSL
Sbjct: 543  NDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPSLLALNSL 602

Query: 679  INAFGEDRRDAEAFAVLQYMKENDVKPDVVTYTTLMKALIRVDKFHEVPAVYEEMILSGC 500
            INAFGEDRRDAEAFAVLQYMKEN VKPDVVTYTTLMKALIRVDKFH+VPAVYEEM++SGC
Sbjct: 603  INAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFHKVPAVYEEMVMSGC 662

Query: 499  TPDRKARAMLRSALRYMKQTIKS 431
            TPDRKARAMLRSALRY+KQT++S
Sbjct: 663  TPDRKARAMLRSALRYVKQTLRS 685