BLASTX nr result
ID: Ziziphus21_contig00001115
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00001115
(3296 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008242006.1| PREDICTED: DNA-directed RNA polymerase II su... 1951 0.0
ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prun... 1950 0.0
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su... 1944 0.0
ref|XP_009337078.1| PREDICTED: DNA-directed RNA polymerase II su... 1940 0.0
ref|XP_009363439.1| PREDICTED: DNA-directed RNA polymerase II su... 1940 0.0
ref|XP_008337964.1| PREDICTED: DNA-directed RNA polymerase II su... 1940 0.0
ref|XP_009344822.1| PREDICTED: DNA-directed RNA polymerase II su... 1939 0.0
ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 1937 0.0
ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II su... 1935 0.0
ref|XP_008337428.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 1934 0.0
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 1927 0.0
ref|XP_011022252.1| PREDICTED: DNA-directed RNA polymerase II su... 1923 0.0
ref|XP_010113285.1| DNA-directed RNA polymerase II subunit rpb1 ... 1922 0.0
ref|XP_006383037.1| DNA-directed RNA polymerase II largest subun... 1921 0.0
ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II su... 1918 0.0
gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium r... 1918 0.0
ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II su... 1918 0.0
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su... 1915 0.0
gb|KRH28857.1| hypothetical protein GLYMA_11G081200 [Glycine max] 1907 0.0
ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II su... 1907 0.0
>ref|XP_008242006.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Prunus mume]
gi|645273710|ref|XP_008242007.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 [Prunus mume]
Length = 1844
Score = 1951 bits (5055), Expect = 0.0
Identities = 957/1021 (93%), Positives = 993/1021 (97%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MDIRFPFSPAE+AKVR VQFGILSPDEIRQMSV+QIEHSETM+GGKPK AGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGFMKTVLS+MRCVCFNCSKILVDE+DHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSVMRCVCFNCSKILVDEDDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQALRIK+PKNRLKKILDACKNKTKC+GGDEI VQGQESEEPVKKSRGGCGAQQPK SI
Sbjct: 121 FKQALRIKSPKNRLKKILDACKNKTKCDGGDEIDVQGQESEEPVKKSRGGCGAQQPKLSI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
+GMKM AEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDED +LLGL+PKYAR
Sbjct: 181 EGMKMNAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQLLGLNPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RTS+WHSE+E+G++TPGDTFVRIEKGELL GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LQRTSAWHSEAESGNVTPGDTFVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETI+KAKN+VK+LI KAQ++ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
EAEPGRTMM+SFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 184
LDSLKMKK+EFD+ F YE DDENWNP+YM+ EH++DLKTIREFRNVFDAEVQKL+TDR Q
Sbjct: 901 LDSLKMKKSEFDKTFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960
Query: 183 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVVP 4
LGTEIA TGDNSWPLPVNLKRLI NAQKTFKID+RRTSDMHPMEIVEAIDKLQER KVVP
Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3 G 1
G
Sbjct: 1021 G 1021
>ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
gi|462398589|gb|EMJ04257.1| hypothetical protein
PRUPE_ppa000093mg [Prunus persica]
Length = 1844
Score = 1950 bits (5052), Expect = 0.0
Identities = 958/1021 (93%), Positives = 992/1021 (97%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MDIRFPFSPAE+AKVR VQFGILSPDEIRQMSV+QIEHSETM+GGKPK AGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDE+DHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQALRIK+PKNRLKKILDACKNKTKC+GGDEI VQGQESEEPVKKSRGGCGAQQPK SI
Sbjct: 121 FKQALRIKSPKNRLKKILDACKNKTKCDGGDEIDVQGQESEEPVKKSRGGCGAQQPKLSI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
+GMKM AEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDED +LLGL+PKYAR
Sbjct: 181 EGMKMNAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQLLGLNPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RTS+WHSE+E+G+ITPGDTFVRIEKGELL GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LQRTSAWHSEAESGNITPGDTFVRIEKGELLAGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETI+KAKN+VK+LI KAQ++ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
EAEPGRTMM+SFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 184
LDSLKMKK+EFD+ F YE DDENWNP+YM+ EH++DLKTIREFRNVFDAEVQKL+TDR Q
Sbjct: 901 LDSLKMKKSEFDKTFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960
Query: 183 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVVP 4
LGTEIA TGDNSWPLPVNLKRLI NAQKTFKID+RRTSDMHPMEIVEAIDKLQER KVVP
Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3 G 1
G
Sbjct: 1021 G 1021
>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Fragaria vesca
subsp. vesca] gi|764511805|ref|XP_011461993.1| PREDICTED:
DNA-directed RNA polymerase II subunit 1 [Fragaria vesca
subsp. vesca]
Length = 1842
Score = 1944 bits (5035), Expect = 0.0
Identities = 954/1021 (93%), Positives = 988/1021 (96%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MDIRFPFSP E+AKVR VQFGILSPDEIRQMSV+QIEHSETM+GGKPK AGLSDPRLGTI
Sbjct: 1 MDIRFPFSPCEVAKVRRVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDE+DHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FK ALRIKNPKNRLKKILDACKNKTKCEGGDEI VQ +++EP+KKSRGGCGAQQPK +I
Sbjct: 121 FKTALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQ--DTDEPLKKSRGGCGAQQPKLTI 178
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
DGMKM+AEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDC+LLGL+PKYAR
Sbjct: 179 DGMKMVAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 238
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 239 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 298
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 299 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 358
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 359 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 418
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 419 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 478
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 479 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 538
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 539 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 598
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RTS+WHSESETG+ITPGDT VRIEKGELL GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 599 LQRTSAWHSESETGNITPGDTHVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 658
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETI+KAKN+VKELI KAQ++ L
Sbjct: 659 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKELISKAQSKSL 718
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
E EPGRTMM+SFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 719 EPEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 778
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 779 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 838
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 839 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 898
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 184
LDSLKMKK EFD+ F Y FDDENWNP+YM+PEH++DLKTIREFRNVFDAEV KL+TDR Q
Sbjct: 899 LDSLKMKKKEFDKTFAYVFDDENWNPDYMLPEHVEDLKTIREFRNVFDAEVSKLETDRLQ 958
Query: 183 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVVP 4
LGTEIA TGDNSWPLPVNLKRLI NAQKTFKID+RRTSDMHPMEIVEAIDKLQER +VVP
Sbjct: 959 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLRVVP 1018
Query: 3 G 1
G
Sbjct: 1019 G 1019
>ref|XP_009337078.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Pyrus x
bretschneideri]
Length = 1820
Score = 1940 bits (5026), Expect = 0.0
Identities = 948/1021 (92%), Positives = 990/1021 (96%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MDIRFPFSPAE+AKV+ VQFGILSPDEIRQMSV++IEHSETM+GGKPK AGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGF+KTVLS+MRCVCFNCSKILVDE+DHK
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFIKTVLSVMRCVCFNCSKILVDEDDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQA+RIKNPKNRLKKILDACKNK+KCEGGDEI VQGQ++EEPVKKSRGGCGAQQPK SI
Sbjct: 121 FKQAMRIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
+GMKM AEYKAQRKK+DDQEQLPEPVERKQTLTAERVLSVLKRISDED ++LGL+PKYAR
Sbjct: 181 EGMKMNAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNGSPAHIIS
Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDF+LFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFILFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RTS+WHSESE+G+ITPGDT VRIEKGELL GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LQRTSAWHSESESGNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETI+KAKN+VK+LI KAQ++ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
EAEPGRTMM+SFENKVNQVLNRARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 184
LDSLKMKKTEFD+ F YE DDE WNP+YM+ EH++DLKTIREFRNVFDAEVQKL+TDR Q
Sbjct: 901 LDSLKMKKTEFDKTFTYELDDEYWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960
Query: 183 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVVP 4
LGTEIA TGDNSWPLPVNLKRLI NAQKTFKID+RRTSDMHPMEIVEAIDKLQER KVVP
Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3 G 1
G
Sbjct: 1021 G 1021
>ref|XP_009363439.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Pyrus x
bretschneideri]
Length = 1820
Score = 1940 bits (5026), Expect = 0.0
Identities = 948/1021 (92%), Positives = 990/1021 (96%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MDIRFPFSPAE+AKV+ VQFGILSPDEIRQMSV++IEHSETM+GGKPK AGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGF+KTVLS+MRCVCFNCSKILVDE+DHK
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFIKTVLSVMRCVCFNCSKILVDEDDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQA+RIKNPKNRLKKILDACKNK+KCEGGDEI VQGQ++EEPVKKSRGGCGAQQPK SI
Sbjct: 121 FKQAMRIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
+GMKM AEYKAQRKK+DDQEQLPEPVERKQTLTAERVLSVLKRISDED ++LGL+PKYAR
Sbjct: 181 EGMKMNAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNGSPAHIIS
Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDF+LFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFILFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RTS+WHSESE+G+ITPGDT VRIEKGELL GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LQRTSAWHSESESGNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETI+KAKN+VK+LI KAQ++ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
EAEPGRTMM+SFENKVNQVLNRARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 184
LDSLKMKKTEFD+ F YE DDE WNP+YM+ EH++DLKTIREFRNVFDAEVQKL+TDR Q
Sbjct: 901 LDSLKMKKTEFDKTFTYELDDEYWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960
Query: 183 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVVP 4
LGTEIA TGDNSWPLPVNLKRLI NAQKTFKID+RRTSDMHPMEIVEAIDKLQER KVVP
Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3 G 1
G
Sbjct: 1021 G 1021
>ref|XP_008337964.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Malus
domestica]
Length = 1820
Score = 1940 bits (5026), Expect = 0.0
Identities = 948/1021 (92%), Positives = 990/1021 (96%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MDIRFPFSPAE+AKV+ VQFGILSPDEIRQMSV++IEHSETM+GGKPK AGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGF+KTVLS+MRCVCFNCSKILVDE+DHK
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFIKTVLSVMRCVCFNCSKILVDEDDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQA+RIKNPKNRLKKILDACKNK+KCEGGDEI VQGQ++EEPVKKSRGGCGAQQPK SI
Sbjct: 121 FKQAMRIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
+GMKM AEYKAQRKK+DDQEQLPEPVERKQTLTAERVLSVLKRISDED ++LGL+PKYAR
Sbjct: 181 EGMKMNAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNGSPAHIIS
Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDF+LFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFILFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RTS+WHSESE+G+ITPGDT VRIEKGELL GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LQRTSAWHSESESGNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETI+KAKN+VK+LI KAQ++ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
EAEPGRTMM+SFENKVNQVLNRARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 184
LDSLKMKKTEFD+ F YE DDE WNP+YM+ EH++DLKTIREFRNVFDAEVQKL+TDR Q
Sbjct: 901 LDSLKMKKTEFDKTFTYELDDEYWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960
Query: 183 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVVP 4
LGTEIA TGDNSWPLPVNLKRLI NAQKTFKID+RRTSDMHPMEIVEAIDKLQER KVVP
Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3 G 1
G
Sbjct: 1021 G 1021
>ref|XP_009344822.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Pyrus x
bretschneideri]
Length = 1820
Score = 1939 bits (5023), Expect = 0.0
Identities = 948/1021 (92%), Positives = 989/1021 (96%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MDIRFP+SPAE+AKV+ VQFGILSPDEIRQMSV++IEHSETM+GGKPK AGLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGFMK VLS+MRCVCFNCSKILVDE+DHK
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSVMRCVCFNCSKILVDEDDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQA+RIKNPK+RLKKILDACKNKTKCEGGDEI VQGQ++EEPVKKSRGGCGAQQPK SI
Sbjct: 121 FKQAMRIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
+GMKM AEYKAQRKK+DD EQLPEPVERKQTLTAERVLSVLKRISDED ++LGL+PKYAR
Sbjct: 181 EGMKMNAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNGSPAHIIS
Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RTS+WHSESE+G+ITPGDT VRIEKGELL GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LQRTSAWHSESESGNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETI+KAKN+VK+LI KAQ++ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
EAEPGRTMM+SFENKVNQVLNRARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 184
LDSLKMKKTEFDR F YE DDENWNP+YM+ EH++DLKTIREFRNVFDAEVQKL+TDR Q
Sbjct: 901 LDSLKMKKTEFDRTFTYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960
Query: 183 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVVP 4
LGTEIA TGDNSWPLPVNLKRLI NAQKTFKID+RRTSDMHPMEIVEAIDKLQER KVVP
Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3 G 1
G
Sbjct: 1021 G 1021
>ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit 1 [Cucumis melo]
Length = 1837
Score = 1937 bits (5018), Expect = 0.0
Identities = 944/1021 (92%), Positives = 988/1021 (96%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MD+RFP+SPAE+AKVRMVQFGILSPDEIRQMSV+QIEH ET GKPK AGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMR VCFNCSKILVDEED K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQALRIKNPKNRL+KILDACKNKTKCEGGDEI VQGQ+S++PVKKSRGGCGAQQPK +I
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKITI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
+GMKM AEYKAQRKK+DDQEQLPEPVERKQTLTAERVL +LKRI+D+DC+LLGL+PKYAR
Sbjct: 181 EGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGILKRITDDDCKLLGLNPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFI KDVFMNILMWWEDFDGK+PAPAILKPQPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RTS+WHSESETGH+TPGDTFVRIEKGELL GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETI+ AKN+VK LI+KAQ R L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
E EPGRTMM+SFENKVNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 184
LDSLKMKK EF+R+F+YEF+DENW PNYM+PEH++DLKTIREFRNVF+AEVQKL+ DR+Q
Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
Query: 183 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVVP 4
LGTEIATTG+NSWP+PVNLKRLIQNAQKTFKID+RR SDMHPMEIVEAIDKLQER KVVP
Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3 G 1
G
Sbjct: 1021 G 1021
>ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Cucumis sativus]
gi|778674691|ref|XP_011650276.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 [Cucumis sativus]
gi|700200498|gb|KGN55631.1| hypothetical protein
Csa_3G002510 [Cucumis sativus]
Length = 1867
Score = 1936 bits (5014), Expect = 0.0
Identities = 945/1021 (92%), Positives = 986/1021 (96%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MD+RFP+SPAE+AKVRMVQFGILSPDEIRQMSV+QIEH ET GKPK AGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMR VCFNCSKILVDEED K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQALRIKNPKNRL+KILDACKNKTKCEGGDEI VQGQ+S++PVKKSRGGCGAQQPK SI
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
+GMKM AEYKAQRKK+DD EQLPEPVERKQTLTAERVL +LKRI+DEDC+LLGL+PKYAR
Sbjct: 181 EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAPAILKPQPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RTS+WHSESETGHITPGDTFVRIEKGELL GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETI+ AKN+VK LI+KAQ R L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
E EPGRTMM+SFENKVNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 184
LDSLKMKK EF+R+F+YEF+DENW PNYM+PEH++DLKTIREFRNVF+AEVQKL+ DR+Q
Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
Query: 183 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVVP 4
LGTEIATTG+NSWP+PVNLKRLIQNAQKTFKID+RR SDMHPMEIVEAIDKLQER KVVP
Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3 G 1
G
Sbjct: 1021 G 1021
>ref|XP_008337428.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit 1-like [Malus domestica]
Length = 1763
Score = 1934 bits (5010), Expect = 0.0
Identities = 946/1021 (92%), Positives = 987/1021 (96%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MDIRFP+SPAE+AKV+ VQFGILSPDEIRQMSV++IEHSETM+GGKPK AGLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGFMK VLS+MRCVCFNCSKILVDE+DHK
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSVMRCVCFNCSKILVDEDDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQA+RIKNPK+RLKKILDACKNKTKCEGGDEI VQGQ++EEPVKKSRGGCGAQQPK SI
Sbjct: 121 FKQAMRIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
+GMKM AEYKAQRKK+DD EQLPEPVERKQTLTAERVLSVLKRISDED ++LGL+PKYAR
Sbjct: 181 EGMKMNAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHN+NLRRQERNGSPAHIIS
Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RTS+WHSESE+G+ITPGDT VRIEKGELL GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LQRTSAWHSESESGNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETI+KAKN+VK+LI KAQ++ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
EAEPGRTMM+SFENKVNQVLNRARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 184
LDSLKMKKTEFD F YE DDE WNP+YM+ EH++DLKTIREFRNVFDAEVQKL+TDR Q
Sbjct: 901 LDSLKMKKTEFDXTFTYELDDEXWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960
Query: 183 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVVP 4
LGTEIA TGDNSWPLPVNLKRLI NAQKTFKID+RRTSDMHPMEIVEAIDKLQER KVVP
Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3 G 1
G
Sbjct: 1021 G 1021
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 1927 bits (4993), Expect = 0.0
Identities = 943/1021 (92%), Positives = 982/1021 (96%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MD+RFP+SPAE+AKVRMVQFGILSPDEIRQMSV+QIEHSET GKPKP GLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL DEEDHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQA +I+NPKNRLKKILDACKNK+KCEGGDEI Q +S+EPVKKSRGGCGAQQPK +I
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
+GMKMIAEYK QRKK+DD EQLPEPVERKQ L+AERVL+VLKRISDEDC LLGL+PKYAR
Sbjct: 181 EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RTS+WHSESETG ITPGDT VRIEKGELL GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETI+KAKN+VKELIR AQ R L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
EAEPGRTMMESFEN+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+QK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 184
LDSLKMKK EFDRVFKYE DDENWNP+YM+PEH++DLKTIREFRNVFDAEVQKL+ DRFQ
Sbjct: 901 LDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQ 960
Query: 183 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVVP 4
LGTEIATTGDNSWP+PVNLKRLI NAQKTFK+D RR SDMHPMEIVEA+DKLQER KVVP
Sbjct: 961 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3 G 1
G
Sbjct: 1021 G 1021
>ref|XP_011022252.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Populus
euphratica]
Length = 1837
Score = 1923 bits (4982), Expect = 0.0
Identities = 941/1023 (91%), Positives = 984/1023 (96%), Gaps = 2/1023 (0%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MD RFP+SPAE+AKVRMVQFGILSPDEIRQMSV+QIEHSET GKPKP GLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL DEEDHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQAL+IKNPK+RLKKILDACKNKTKCEGGDEI VQGQ++EEPVKKSRGGCGAQQPK +I
Sbjct: 121 FKQALKIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDNEEPVKKSRGGCGAQQPKLTI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
+GMKMIAEYK QRKK+DDQEQLPEPVERKQTLTAERVLSVLKRISDEDC+LLGLDPKYAR
Sbjct: 181 EGMKMIAEYKVQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER+G+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP I+KP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTIVKPRPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RT++WH +SE G ITPGDT VRIEKGELL GTLCKKTLGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LIRTAAWHMDSERGMITPGDTLVRIEKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETI+ AKN+VK+LIRKAQ ++L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKNEVKDLIRKAQNKEL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
EAEPGRTMMESFEN+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 184
LDSLKMKK EFDRVF+YEFDDE+WNP YMMP+H++DL+ IRE R+VFDAEVQKL+ DR+Q
Sbjct: 901 LDSLKMKKAEFDRVFRYEFDDEDWNPTYMMPDHVEDLRNIRELRDVFDAEVQKLEADRYQ 960
Query: 183 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYR--RTSDMHPMEIVEAIDKLQERRKV 10
LGTEIATTGDN+WP+PVNLKRLI NAQKTFKID R R SD+HPME VEA+DKLQER KV
Sbjct: 961 LGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDTRIGRVSDIHPMEAVEAVDKLQERLKV 1020
Query: 9 VPG 1
VPG
Sbjct: 1021 VPG 1023
>ref|XP_010113285.1| DNA-directed RNA polymerase II subunit rpb1 [Morus notabilis]
gi|587949090|gb|EXC35292.1| DNA-directed RNA polymerase
II subunit rpb1 [Morus notabilis]
Length = 1866
Score = 1922 bits (4979), Expect = 0.0
Identities = 951/1043 (91%), Positives = 989/1043 (94%), Gaps = 22/1043 (2%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MDIRFPFSPAE+AKVR VQFGILSPDEI + E + G KPKPAGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRTVQFGILSPDEI-------MGQGEKIRGEKPKPAGLSDPRLGTI 53
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKI+VDE+DHK
Sbjct: 54 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKIMVDEDDHK 113
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQAL+IKNPKN+LKKILDACKNK+KCEGGD+I VQGQESEEPVKKSRGGCGAQQPK SI
Sbjct: 114 FKQALKIKNPKNKLKKILDACKNKSKCEGGDDINVQGQESEEPVKKSRGGCGAQQPKLSI 173
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
DGMKM+AEYK+QRKK D+QEQLPEPVERKQTLTAERVLSVLKRISDEDC+LLGL+PKYAR
Sbjct: 174 DGMKMVAEYKSQRKKIDEQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 233
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSE--DDLTHQLAMIIRHNENLRRQERNGSPAHI 2170
PDWMILQVL PSVMMDTSSRSE DDLTHQLAMIIRHNENLRRQERNGSPAHI
Sbjct: 234 PDWMILQVLPIPPPPVRPSVMMDTSSRSEASDDLTHQLAMIIRHNENLRRQERNGSPAHI 293
Query: 2169 ISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFS 1990
ISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFS
Sbjct: 294 ISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFS 353
Query: 1989 ARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 1810
ARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI
Sbjct: 354 ARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 413
Query: 1809 IRDDGQRLDLRYLKKSSDHHLELGYK--------------------VERHLNDGDFVLFN 1690
IRDDGQRLDLRYLKKSSDHHLELGYK VERHLNDGDFVLFN
Sbjct: 414 IRDDGQRLDLRYLKKSSDHHLELGYKARLPILLLLLLFLGPWSGSVVERHLNDGDFVLFN 473
Query: 1689 RQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 1510
RQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM
Sbjct: 474 RQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM 533
Query: 1509 MVPKCVVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAI 1330
MVPKC+VSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAI
Sbjct: 534 MVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAI 593
Query: 1329 LKPQPLWTGKQVFNLIIPKQINLNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKK 1150
LKP+PLWTGKQVFNLIIPKQINLNRTS+WH+ESE+G+ITPGDT VRIEKGELL GTLCKK
Sbjct: 594 LKPRPLWTGKQVFNLIIPKQINLNRTSAWHAESESGYITPGDTLVRIEKGELLSGTLCKK 653
Query: 1149 TLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKIN 970
TLGTS+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADASTMEKIN
Sbjct: 654 TLGTSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKIN 713
Query: 969 ETITKAKNDVKELIRKAQARDLEAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSES 790
ETI++AKNDVKELIRKAQA++LEAEPGRTMMESFENKVNQVLN+ARDDAGSSAQKSLSES
Sbjct: 714 ETISRAKNDVKELIRKAQAKELEAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSES 773
Query: 789 NNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFV 610
NNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFV
Sbjct: 774 NNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFV 833
Query: 609 ENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSL 430
ENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSL
Sbjct: 834 ENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSL 893
Query: 429 GDVIQFLYGEDGMDSVWIESQKLDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLK 250
GDVIQFLYGEDGMDSVWIESQKLDSLKMKKTEF+RVF+YEFD+E WNP YM+PEH++DLK
Sbjct: 894 GDVIQFLYGEDGMDSVWIESQKLDSLKMKKTEFERVFRYEFDNETWNPTYMLPEHVEDLK 953
Query: 249 TIREFRNVFDAEVQKLDTDRFQLGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTS 70
TIREFRNVFDAEVQKL++DR QLGTEIATTGDNSWPLPVNLKRLIQNAQKTFKID+RRTS
Sbjct: 954 TIREFRNVFDAEVQKLESDRLQLGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDFRRTS 1013
Query: 69 DMHPMEIVEAIDKLQERRKVVPG 1
DMHPMEIVEAIDKLQER KVVPG
Sbjct: 1014 DMHPMEIVEAIDKLQERLKVVPG 1036
>ref|XP_006383037.1| DNA-directed RNA polymerase II largest subunit family protein
[Populus trichocarpa] gi|550338614|gb|ERP60834.1|
DNA-directed RNA polymerase II largest subunit family
protein [Populus trichocarpa]
Length = 1837
Score = 1921 bits (4977), Expect = 0.0
Identities = 941/1023 (91%), Positives = 983/1023 (96%), Gaps = 2/1023 (0%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MD RFP+SPAE+AKVRMVQFGILSPDEIRQMSV+QIEHSET GKPKP GLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL DEEDHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQAL+IKNPK+RLKKILDACKNKTKCEGGDEI VQGQ++EEPVKKSRGGCGAQQPK +I
Sbjct: 121 FKQALKIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDNEEPVKKSRGGCGAQQPKLTI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
+GMKMIAEYK QRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDC+LLGLDPKYAR
Sbjct: 181 EGMKMIAEYKVQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER+G+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP I+KP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTIVKPRPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RT++WH +SE G ITPGDT VRIEKGELL GTLCKKTLGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LIRTAAWHMDSERGMITPGDTLVRIEKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETI+ AKN+VK+LIRKAQ ++L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKNEVKDLIRKAQNKEL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
EAEPGRTMMESFEN+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 184
LDSLKMKK EFDRVF+YEFDDE+WNP YMM +H++DL+ IRE R+VFDAEVQKL+ DR+Q
Sbjct: 901 LDSLKMKKAEFDRVFRYEFDDEDWNPTYMMTDHVEDLRNIRELRDVFDAEVQKLEADRYQ 960
Query: 183 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYR--RTSDMHPMEIVEAIDKLQERRKV 10
LGTEIATTGDN+WP+PVNLKRLI NAQKTFKID R R SD+HPME VEA+DKLQER KV
Sbjct: 961 LGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDTRIGRVSDIHPMEAVEAVDKLQERLKV 1020
Query: 9 VPG 1
VPG
Sbjct: 1021 VPG 1023
>ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X2
[Gossypium raimondii]
Length = 1832
Score = 1918 bits (4968), Expect = 0.0
Identities = 938/1022 (91%), Positives = 987/1022 (96%), Gaps = 1/1022 (0%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MD+RFP+SPAE+AKVR+VQFGILSPDEIRQMSV+QIEHSET GKPK GLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL DEEDHK
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQAL+IKNPKNRLKKILDACKNKTKCEGGDEI VQGQ++EEPVKKSRGGCGAQQPK +I
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
DGMKMIAEYKAQRKK+DD EQLPEPVERKQTLTAERVLSVLKRISDEDC+LLGL+PKYAR
Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTH LAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFH+ATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RTS+WHSESETG ITPGDT VRIEKGE+L GTLCKKTLGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETI+KAK+DVK+LI KAQ +DL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
E EPGRTMMESFENKVNQVLN+ARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNP-NYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRF 187
LDSLKMKK+EFDRVF+Y+ DDENWNP +YM+PEHI+DL+TI+E R+VFDAEV KL+ DR+
Sbjct: 901 LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960
Query: 186 QLGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVV 7
QLGTEIA TGD++WPLPVNLKRLI NAQKTFK+D+RR SD+HP+EIV+++DKLQER KVV
Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020
Query: 6 PG 1
PG
Sbjct: 1021 PG 1022
>gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium raimondii]
Length = 1809
Score = 1918 bits (4968), Expect = 0.0
Identities = 938/1022 (91%), Positives = 987/1022 (96%), Gaps = 1/1022 (0%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MD+RFP+SPAE+AKVR+VQFGILSPDEIRQMSV+QIEHSET GKPK GLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL DEEDHK
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQAL+IKNPKNRLKKILDACKNKTKCEGGDEI VQGQ++EEPVKKSRGGCGAQQPK +I
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
DGMKMIAEYKAQRKK+DD EQLPEPVERKQTLTAERVLSVLKRISDEDC+LLGL+PKYAR
Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTH LAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFH+ATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RTS+WHSESETG ITPGDT VRIEKGE+L GTLCKKTLGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETI+KAK+DVK+LI KAQ +DL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
E EPGRTMMESFENKVNQVLN+ARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNP-NYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRF 187
LDSLKMKK+EFDRVF+Y+ DDENWNP +YM+PEHI+DL+TI+E R+VFDAEV KL+ DR+
Sbjct: 901 LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960
Query: 186 QLGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVV 7
QLGTEIA TGD++WPLPVNLKRLI NAQKTFK+D+RR SD+HP+EIV+++DKLQER KVV
Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020
Query: 6 PG 1
PG
Sbjct: 1021 PG 1022
>ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] gi|823191464|ref|XP_012491468.1|
PREDICTED: DNA-directed RNA polymerase II subunit 1
isoform X1 [Gossypium raimondii]
gi|823191467|ref|XP_012491470.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 isoform X1 [Gossypium
raimondii] gi|823191470|ref|XP_012491471.1| PREDICTED:
DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] gi|763776132|gb|KJB43255.1|
hypothetical protein B456_007G190500 [Gossypium
raimondii] gi|763776133|gb|KJB43256.1| hypothetical
protein B456_007G190500 [Gossypium raimondii]
gi|763776135|gb|KJB43258.1| hypothetical protein
B456_007G190500 [Gossypium raimondii]
Length = 1846
Score = 1918 bits (4968), Expect = 0.0
Identities = 938/1022 (91%), Positives = 987/1022 (96%), Gaps = 1/1022 (0%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MD+RFP+SPAE+AKVR+VQFGILSPDEIRQMSV+QIEHSET GKPK GLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL DEEDHK
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQAL+IKNPKNRLKKILDACKNKTKCEGGDEI VQGQ++EEPVKKSRGGCGAQQPK +I
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
DGMKMIAEYKAQRKK+DD EQLPEPVERKQTLTAERVLSVLKRISDEDC+LLGL+PKYAR
Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTH LAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFH+ATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RTS+WHSESETG ITPGDT VRIEKGE+L GTLCKKTLGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETI+KAK+DVK+LI KAQ +DL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
E EPGRTMMESFENKVNQVLN+ARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNP-NYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRF 187
LDSLKMKK+EFDRVF+Y+ DDENWNP +YM+PEHI+DL+TI+E R+VFDAEV KL+ DR+
Sbjct: 901 LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960
Query: 186 QLGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVV 7
QLGTEIA TGD++WPLPVNLKRLI NAQKTFK+D+RR SD+HP+EIV+++DKLQER KVV
Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020
Query: 6 PG 1
PG
Sbjct: 1021 PG 1022
>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 1915 bits (4962), Expect = 0.0
Identities = 935/1021 (91%), Positives = 980/1021 (95%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MD RFP+SPAE++KVR VQFGILSPD IRQMSV+QIEHSET GKPKP GLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVSKVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TC ANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL DEEDHK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQA RI+NPKNRLKK+LDACKNKTKCEGGDEI VQGQ++ EP+KK RGGCGAQQPK +I
Sbjct: 121 FKQAQRIRNPKNRLKKVLDACKNKTKCEGGDEIEVQGQDTGEPIKKRRGGCGAQQPKLTI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
+GMKMIAEYKAQRKK+DDQEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGL+P+YAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCILLGLNPEYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
+DGQRLDLRYLKKSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L RTS+WHSESETG ITPGDT VRIE+GELL GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LMRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETI+KAKN+VKELIR AQ R L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
EAEPGRTMMESFEN+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+QK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 184
LDSLKM+K+EFD+VF+YE DDENWNP+YM+PEH++DLKTIREFRNVFDAEVQKL+ DR+Q
Sbjct: 901 LDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 960
Query: 183 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVVP 4
LGTEIATTGDN+WP+PVNLKRLI NAQKTFK+D RR SDMHPMEIVEA+DKLQER KVVP
Sbjct: 961 LGTEIATTGDNNWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3 G 1
G
Sbjct: 1021 G 1021
>gb|KRH28857.1| hypothetical protein GLYMA_11G081200 [Glycine max]
Length = 1803
Score = 1907 bits (4939), Expect = 0.0
Identities = 935/1021 (91%), Positives = 977/1021 (95%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MDIRFPFSPAE+AKVRMVQFGILSPDEIRQMSV+QIEH ET GKPK GLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTA+MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL DE DHK
Sbjct: 61 DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQALRI+NPKNRLKKILDACKNK+KCEGGDEI + GQ+++EPVKKSRGGCGAQQPK +I
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
+GMKMIAEYKAQRKKSDDQEQLPEPVERKQTL+AERVL VLKRISDEDC+LLGL+PKYAR
Sbjct: 181 EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGSPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFI KDVFMNILMWWEDFDGKVPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPEPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L R SSWHSESE G ITPGDT VRIEKGELL GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTME IN+TI+ AK VK+LIR+AQ + L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIREAQEKKL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
EAEPGRTMM+SFEN+VNQ LNRARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+QK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 184
LDSLKMKKTEFDRVF+YEFDDENW P YM+ E ++DLKTIREFRNVF+AEVQKL+ DR+Q
Sbjct: 901 LDSLKMKKTEFDRVFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLEADRYQ 960
Query: 183 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVVP 4
L TEIATTGD+S PLPVNLKRLI NAQKTFK+D+RR SDMHPMEIVEAIDKLQER KVVP
Sbjct: 961 LATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3 G 1
G
Sbjct: 1021 G 1021
>ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Glycine
max] gi|947080066|gb|KRH28855.1| hypothetical protein
GLYMA_11G081200 [Glycine max] gi|947080067|gb|KRH28856.1|
hypothetical protein GLYMA_11G081200 [Glycine max]
Length = 1827
Score = 1907 bits (4939), Expect = 0.0
Identities = 935/1021 (91%), Positives = 977/1021 (95%)
Frame = -3
Query: 3063 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 2884
MDIRFPFSPAE+AKVRMVQFGILSPDEIRQMSV+QIEH ET GKPK GLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 2883 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 2704
DRK+KC+TCTA+MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL DE DHK
Sbjct: 61 DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120
Query: 2703 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 2524
FKQALRI+NPKNRLKKILDACKNK+KCEGGDEI + GQ+++EPVKKSRGGCGAQQPK +I
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180
Query: 2523 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 2344
+GMKMIAEYKAQRKKSDDQEQLPEPVERKQTL+AERVL VLKRISDEDC+LLGL+PKYAR
Sbjct: 181 EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 2343 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 2164
PDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGSPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300
Query: 2163 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1984
EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1983 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1804
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1803 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1624
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1623 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 1444
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1443 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 1264
LLGCRKITKRDTFI KDVFMNILMWWEDFDGKVPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPEPLWTGKQVFNLIIPKQIN 600
Query: 1263 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 1084
L R SSWHSESE G ITPGDT VRIEKGELL GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 1083 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 904
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTME IN+TI+ AK VK+LIR+AQ + L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIREAQEKKL 720
Query: 903 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 724
EAEPGRTMM+SFEN+VNQ LNRARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 723 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 544
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 543 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 364
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+QK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 363 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 184
LDSLKMKKTEFDRVF+YEFDDENW P YM+ E ++DLKTIREFRNVF+AEVQKL+ DR+Q
Sbjct: 901 LDSLKMKKTEFDRVFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLEADRYQ 960
Query: 183 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERRKVVP 4
L TEIATTGD+S PLPVNLKRLI NAQKTFK+D+RR SDMHPMEIVEAIDKLQER KVVP
Sbjct: 961 LATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3 G 1
G
Sbjct: 1021 G 1021