BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00000785
         (3823 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun...  1593   0.0  
ref|XP_008243031.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1591   0.0  
ref|XP_009366215.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1587   0.0  
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1580   0.0  
ref|XP_008452554.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1501   0.0  
ref|XP_004144791.2| PREDICTED: DNA-directed RNA polymerase 3, ch...  1493   0.0  
ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isof...  1488   0.0  
ref|XP_012445978.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1483   0.0  
ref|XP_011018068.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1483   0.0  
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1479   0.0  
ref|XP_012071554.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1478   0.0  
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...  1470   0.0  
gb|KJB53874.1| hypothetical protein B456_009G009300 [Gossypium r...  1469   0.0  
ref|XP_011033373.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1466   0.0  
gb|KDO62286.1| hypothetical protein CISIN_1g001795mg [Citrus sin...  1466   0.0  
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu...  1466   0.0  
gb|KDO62285.1| hypothetical protein CISIN_1g001795mg [Citrus sin...  1465   0.0  
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1462   0.0  
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr...  1460   0.0  
ref|XP_008394282.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1459   0.0  

>ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
            gi|462398756|gb|EMJ04424.1| hypothetical protein
            PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score = 1593 bits (4125), Expect = 0.0
 Identities = 788/980 (80%), Positives = 861/980 (87%), Gaps = 1/980 (0%)
 Frame = -1

Query: 3664 MTSAASFYPSPPQAQISNSTWRKNNPPKANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 3485
            M S ASF PSP QAQ    + R +  PK N                              
Sbjct: 1    MASTASFSPSP-QAQTYTCSSRWSKAPKLNHKFLFSSTSNSLFFKPSHSSSTHFPLNLKP 59

Query: 3484 S-DPIHFHPLSDSIQDNLVENLENSVNFQIPINEIGRVMPQESPSRIFIQDPPWIASLFL 3308
              +P+H  PL DSIQDN+VEN   S+NFQIP++E   + PQES  RIFIQDPPWIASLFL
Sbjct: 60   PPEPVHIPPLRDSIQDNIVEN---SMNFQIPMSEFHLITPQESAPRIFIQDPPWIASLFL 116

Query: 3307 KGIYKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERTVXXXXXXXXXXXXXKLAPN 3128
            KGIYKR  QELKLE KEIERR YN+LRRRQIKAETEAWER V             KLAPN
Sbjct: 117  KGIYKRANQELKLESKEIERRNYNVLRRRQIKAETEAWERMVDEYKDLEKVMREKKLAPN 176

Query: 3127 LPHVKLLFLGWFEPLREAIEKEQRVQQTKKQKAAFAPHIDLLPAEKMALIVMHKMMGLVM 2948
            LP+VK LFLGWFEPLREAI +EQ+ QQTKK KAAFAPHIDLLPA+KMALIVMHKMMGLVM
Sbjct: 177  LPYVKALFLGWFEPLREAIAREQKTQQTKKHKAAFAPHIDLLPADKMALIVMHKMMGLVM 236

Query: 2947 VGNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKKTLAENDEGLSKEKEMLRKR 2768
            VGN DGCVQVVQAAV IGMAIEQEVRIHSFLEKTKN Q+KKT   +++GLSKEKE+LRKR
Sbjct: 237  VGNQDGCVQVVQAAVHIGMAIEQEVRIHSFLEKTKNLQKKKTGVADEDGLSKEKEILRKR 296

Query: 2767 INGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELLTETAYIQPPLDQSADSPPD 2588
            +NGL+RRKRL+EVQKLL KEE KPWGRD QAKLGSRLIELLTETAY+QPPL Q ADSPPD
Sbjct: 297  VNGLIRRKRLNEVQKLLIKEEMKPWGRDKQAKLGSRLIELLTETAYVQPPLSQLADSPPD 356

Query: 2587 VRPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTAKHMLIPYVPMLVPPRKWKG 2408
            VRPAFRHRFK + K+PG K+VKNYGVIECDPL+LTGLD TAKHMLIPYVPMLVPP++WKG
Sbjct: 357  VRPAFRHRFKAVAKSPGQKIVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPKRWKG 416

Query: 2407 YDRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEALDMLGNTKWRVNRRVLNVVE 2228
            YD+GGHLFLPSYVMRTHGSRKQ +A+  +   QMQKV+EALDMLG+TKWRVN++VL+VVE
Sbjct: 417  YDKGGHLFLPSYVMRTHGSRKQVDAMRNISRNQMQKVFEALDMLGSTKWRVNKKVLSVVE 476

Query: 2227 SIWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRKAKKLNQERHSQRCDTELKL 2048
            SIWARGGNIAGLV+REDVP+P+K  SEDL EIQ+W+WS+RKAKK+NQERHSQRCDTELKL
Sbjct: 477  SIWARGGNIAGLVNREDVPVPDKSPSEDLKEIQEWKWSVRKAKKINQERHSQRCDTELKL 536

Query: 2047 SVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLK 1868
            SVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGL WLK
Sbjct: 537  SVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLK 596

Query: 1867 IHLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGNRWWLTAEDPFQCLAACMSL 1688
            IHLANLYAGGVEKLSY+GRLAFVDNHI++IFDSA NPVNGNRWWLTAEDP QCLAAC++L
Sbjct: 597  IHLANLYAGGVEKLSYEGRLAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINL 656

Query: 1687 SEALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGDKPADVYSEIAR 1508
            SEALNS SP TVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLV GDKPADVYSEIA 
Sbjct: 657  SEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVDGDKPADVYSEIAA 716

Query: 1507 RVHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLE 1328
            RVH+IM RDSNKDP ++PNALLA++L+NQ+DRKLVKQTVMTSVYGVTYVGAREQIKRRLE
Sbjct: 717  RVHEIMKRDSNKDPTTSPNALLARILVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLE 776

Query: 1327 EKGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLGDCAKVIASENRPVRWITPL 1148
            EKG+ITDDR+LF+A+CYAAKVTLAALGEIF+AAR IMSWLGDCAKVIASEN+PVRW TPL
Sbjct: 777  EKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPL 836

Query: 1147 GLPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAFPPNFVHSLDGSHMMMTALA 968
            GLPVVQPYCK+ERHLIRT+LQVLALQRE +SVD+R+QRTAFPPNFVHSLDGSHMMMTALA
Sbjct: 837  GLPVVQPYCKSERHLIRTSLQVLALQRESNSVDIRKQRTAFPPNFVHSLDGSHMMMTALA 896

Query: 967  CRDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPILENLLEGFEASYPALKFPP 788
            CRDAGLRFAGVHDSFWTH CDVDQMN+ILREKFVELYSMPILE+LLE F+ASYPAL FPP
Sbjct: 897  CRDAGLRFAGVHDSFWTHPCDVDQMNEILREKFVELYSMPILESLLESFQASYPALTFPP 956

Query: 787  LPERGDFDLHEVLESPYFFN 728
            LPERGDFDL +VLESPYFFN
Sbjct: 957  LPERGDFDLLQVLESPYFFN 976


>ref|XP_008243031.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Prunus mume]
          Length = 976

 Score = 1591 bits (4120), Expect = 0.0
 Identities = 788/981 (80%), Positives = 860/981 (87%), Gaps = 2/981 (0%)
 Frame = -1

Query: 3664 MTSAASFYPSPP-QAQISNSTWRKNNPPKANXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 3488
            M S ASF PSP  Q    +S W K  PPK N                             
Sbjct: 1    MASTASFSPSPQGQGYTCSSRWSK--PPKLNHKFLFSSTSNSLFFKPSHSSSTHFPLSLK 58

Query: 3487 XS-DPIHFHPLSDSIQDNLVENLENSVNFQIPINEIGRVMPQESPSRIFIQDPPWIASLF 3311
               +P+H  PL DSIQDN+VEN   S+NFQIP++E   + PQES  RIFIQDPPWIASLF
Sbjct: 59   PPPEPVHIPPLRDSIQDNIVEN---SMNFQIPMSEFHLITPQESGPRIFIQDPPWIASLF 115

Query: 3310 LKGIYKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERTVXXXXXXXXXXXXXKLAP 3131
            LKGIYKR  QELKLE KEIERR YNLLRRRQIKAETEAWER V             KLAP
Sbjct: 116  LKGIYKRANQELKLESKEIERRNYNLLRRRQIKAETEAWERMVDEYKDLEKVMREKKLAP 175

Query: 3130 NLPHVKLLFLGWFEPLREAIEKEQRVQQTKKQKAAFAPHIDLLPAEKMALIVMHKMMGLV 2951
            NLP+VK LFLGWFEPLREAI +EQ+ QQTKK KAAFAPHIDLLPA+KMALIVMHKMMGLV
Sbjct: 176  NLPYVKALFLGWFEPLREAIAREQKTQQTKKHKAAFAPHIDLLPADKMALIVMHKMMGLV 235

Query: 2950 MVGNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKKTLAENDEGLSKEKEMLRK 2771
            MVGN DGCVQVVQAAV IGMAIEQEVRIHSFLEKTKN Q+KKT   +++GLSKEKE+LRK
Sbjct: 236  MVGNQDGCVQVVQAAVHIGMAIEQEVRIHSFLEKTKNLQKKKTGVADEDGLSKEKEILRK 295

Query: 2770 RINGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELLTETAYIQPPLDQSADSPP 2591
            R+NGL+RRKRL+EVQKLL KEE KPWGRD QAKLGSRLIELLTETAY+QPPL Q A+SPP
Sbjct: 296  RVNGLIRRKRLNEVQKLLIKEEMKPWGRDKQAKLGSRLIELLTETAYVQPPLSQLAESPP 355

Query: 2590 DVRPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTAKHMLIPYVPMLVPPRKWK 2411
            DVRPAFRHRFK + K+PG K+VKNYGVIECDPL+LTGLD TAKHMLIPYVPMLVPP++WK
Sbjct: 356  DVRPAFRHRFKAVAKSPGQKIVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPKRWK 415

Query: 2410 GYDRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEALDMLGNTKWRVNRRVLNVV 2231
            GYD+GGHLFLPSYVMRTHGSRKQ +A+  +   QMQKV+EALDMLG+TKWRVN++VL+VV
Sbjct: 416  GYDKGGHLFLPSYVMRTHGSRKQVDAMRNISRNQMQKVFEALDMLGSTKWRVNKKVLSVV 475

Query: 2230 ESIWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRKAKKLNQERHSQRCDTELK 2051
            ESIWARGGNIAGLV+REDVP+P+K  SEDL EIQ+W+WS+RKAKK+NQERHS RCDTELK
Sbjct: 476  ESIWARGGNIAGLVNREDVPVPDKSPSEDLKEIQEWKWSVRKAKKINQERHSLRCDTELK 535

Query: 2050 LSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWL 1871
            LSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGL WL
Sbjct: 536  LSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWL 595

Query: 1870 KIHLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGNRWWLTAEDPFQCLAACMS 1691
            KIHLANLYAGGVEKLSY+GRLAFVDNHI++IFDSA NPVNGNRWWLTAEDP QCLAAC++
Sbjct: 596  KIHLANLYAGGVEKLSYEGRLAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACIN 655

Query: 1690 LSEALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGDKPADVYSEIA 1511
            LSEALNS SP TVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLV GDKPADVYSEIA
Sbjct: 656  LSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVDGDKPADVYSEIA 715

Query: 1510 RRVHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL 1331
             RVH+IM RDSNKDP ++PNALLA++L+NQ+DRKLVKQTVMTSVYGVTYVGAREQIKRRL
Sbjct: 716  ARVHEIMKRDSNKDPTTSPNALLARILVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRL 775

Query: 1330 EEKGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLGDCAKVIASENRPVRWITP 1151
            EEKG+ITDDR+LF+A+CYAAKVTLAALGEIF+AAR IMSWLGDCAKVIASEN+PVRW TP
Sbjct: 776  EEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTP 835

Query: 1150 LGLPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAFPPNFVHSLDGSHMMMTAL 971
            LGLPVVQPYCK+ERHLIRT+LQVLALQRE +SVD+R+QRTAFPPNFVHSLDGSHMMMTAL
Sbjct: 836  LGLPVVQPYCKSERHLIRTSLQVLALQRESNSVDIRKQRTAFPPNFVHSLDGSHMMMTAL 895

Query: 970  ACRDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPILENLLEGFEASYPALKFP 791
            ACRDAGLRFAGVHDSFWTH CDVDQMN+ILREKFVELYSMPILE+LLE F+ASYPAL FP
Sbjct: 896  ACRDAGLRFAGVHDSFWTHPCDVDQMNEILREKFVELYSMPILESLLESFQASYPALTFP 955

Query: 790  PLPERGDFDLHEVLESPYFFN 728
            PLPERGDFDL +VLESPYFFN
Sbjct: 956  PLPERGDFDLLQVLESPYFFN 976


>ref|XP_009366215.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Pyrus x
            bretschneideri]
          Length = 972

 Score = 1587 bits (4110), Expect = 0.0
 Identities = 787/979 (80%), Positives = 856/979 (87%)
 Frame = -1

Query: 3664 MTSAASFYPSPPQAQISNSTWRKNNPPKANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 3485
            M S ASF PSP QAQ  +STWRK  PPK +                              
Sbjct: 1    MASTASFSPSP-QAQTYSSTWRK--PPKLSHKFLFSSASNRLVFKPSLSTPFPLSLQPPP 57

Query: 3484 SDPIHFHPLSDSIQDNLVENLENSVNFQIPINEIGRVMPQESPSRIFIQDPPWIASLFLK 3305
             +P+  H + DS+QDNLVEN   S+N Q+PI E   + P ES  RIFIQDPPWIA+LFLK
Sbjct: 58   -EPVLSHLVRDSVQDNLVEN---SMNLQLPIREFHLITPDESAPRIFIQDPPWIAALFLK 113

Query: 3304 GIYKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERTVXXXXXXXXXXXXXKLAPNL 3125
            G+YK+  QELKLE KEI+RRKYNLLRRRQIKAETEAWER V             KLAP+L
Sbjct: 114  GMYKKANQELKLESKEIDRRKYNLLRRRQIKAETEAWERMVEEYKDLERVMREKKLAPSL 173

Query: 3124 PHVKLLFLGWFEPLREAIEKEQRVQQTKKQKAAFAPHIDLLPAEKMALIVMHKMMGLVMV 2945
            P+VK LFLGWFEPLREAI +EQ+VQQTKK KAAFAPHIDLLP +KMALIVMHKMMGLVMV
Sbjct: 174  PYVKTLFLGWFEPLREAIAREQQVQQTKKHKAAFAPHIDLLPPDKMALIVMHKMMGLVMV 233

Query: 2944 GNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKKTLAENDEGLSKEKEMLRKRI 2765
            GN DGCVQVVQAAV IGMAIEQEVRIHSFLEKTKN+QRKKT   +++ L KEKE+LRKR+
Sbjct: 234  GNQDGCVQVVQAAVHIGMAIEQEVRIHSFLEKTKNFQRKKTAVADEDSLIKEKEILRKRV 293

Query: 2764 NGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELLTETAYIQPPLDQSADSPPDV 2585
            N L++RKRL EVQKLL KEEFKPWGRDTQAKLGSRLIELLTETAY+QPPL+Q AD PPDV
Sbjct: 294  NVLIKRKRLREVQKLLVKEEFKPWGRDTQAKLGSRLIELLTETAYVQPPLNQLADGPPDV 353

Query: 2584 RPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTAKHMLIPYVPMLVPPRKWKGY 2405
            RPAFRHRFK   K PG KLVKNYGVIECDPL+LTGLD TAKHMLIPYVPMLVPPRKWKGY
Sbjct: 354  RPAFRHRFKAAAKTPGQKLVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPRKWKGY 413

Query: 2404 DRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEALDMLGNTKWRVNRRVLNVVES 2225
            D+GGHLFLPSYVMRTHGSRKQ + +  + GKQMQKV+EALDMLG+TKWRVN++VLNVVES
Sbjct: 414  DKGGHLFLPSYVMRTHGSRKQVDTMRNISGKQMQKVFEALDMLGSTKWRVNKKVLNVVES 473

Query: 2224 IWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRKAKKLNQERHSQRCDTELKLS 2045
            IWARGGNIAGLVDREDVP+P+KP  E LTEIQ+W+WS+RKAKK+NQERHS RCDTELKLS
Sbjct: 474  IWARGGNIAGLVDREDVPVPDKPPLEGLTEIQEWKWSVRKAKKINQERHSLRCDTELKLS 533

Query: 2044 VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLKI 1865
            VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGL WLKI
Sbjct: 534  VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKI 593

Query: 1864 HLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGNRWWLTAEDPFQCLAACMSLS 1685
            HLANLYAGGVEKLSY+ R AFVD+HI++IFDSA NPVNGNRWWLTAEDP QCLAAC++LS
Sbjct: 594  HLANLYAGGVEKLSYEERHAFVDHHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLS 653

Query: 1684 EALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGDKPADVYSEIARR 1505
            EALNS SP TVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAG+KPADVYSEIA R
Sbjct: 654  EALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAAR 713

Query: 1504 VHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEE 1325
            VH+IM RDSNKDP ++PNALLA+VL+NQ+DRKLVKQTVMTSVYGVTYVGAREQIKRRLEE
Sbjct: 714  VHEIMERDSNKDPTTSPNALLARVLVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEE 773

Query: 1324 KGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLGDCAKVIASENRPVRWITPLG 1145
            KG ITDDR+LF+A+CYAAKVTLAALGEIF+AAR IM WLGDCAKVIASEN+PVRW TPLG
Sbjct: 774  KGFITDDRLLFTAACYAAKVTLAALGEIFQAARGIMGWLGDCAKVIASENQPVRWTTPLG 833

Query: 1144 LPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAFPPNFVHSLDGSHMMMTALAC 965
            LPVVQPYCK ERHLIRT+LQVLALQRE +S+DVR+QRTAFPPNFVHSLDGSHMMMTALAC
Sbjct: 834  LPVVQPYCKNERHLIRTSLQVLALQRESNSIDVRKQRTAFPPNFVHSLDGSHMMMTALAC 893

Query: 964  RDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPILENLLEGFEASYPALKFPPL 785
            RDAGLRFAGVHDSFWTHACDVDQMN+ILREKF+ELYSMPILENLLE F+ASYPAL FPPL
Sbjct: 894  RDAGLRFAGVHDSFWTHACDVDQMNEILREKFIELYSMPILENLLESFQASYPALTFPPL 953

Query: 784  PERGDFDLHEVLESPYFFN 728
            PERGDFDL EVLESPYFFN
Sbjct: 954  PERGDFDLQEVLESPYFFN 972


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Fragaria
            vesca subsp. vesca]
          Length = 973

 Score = 1580 bits (4092), Expect = 0.0
 Identities = 765/918 (83%), Positives = 840/918 (91%)
 Frame = -1

Query: 3481 DPIHFHPLSDSIQDNLVENLENSVNFQIPINEIGRVMPQESPSRIFIQDPPWIASLFLKG 3302
            DPI FHPL+DS+QDNLVENLENS+ FQ+PI+E           RIFIQDPPWIASLFLKG
Sbjct: 66   DPIQFHPLNDSVQDNLVENLENSIKFQVPISE----------PRIFIQDPPWIASLFLKG 115

Query: 3301 IYKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERTVXXXXXXXXXXXXXKLAPNLP 3122
            ++K+  +ELK+E KEI+RRKYNLLRRRQIKAETEAWE+ V             KLAP+LP
Sbjct: 116  MFKKVNKELKVESKEIDRRKYNLLRRRQIKAETEAWEKMVEDYKDLERVMREKKLAPSLP 175

Query: 3121 HVKLLFLGWFEPLREAIEKEQRVQQTKKQKAAFAPHIDLLPAEKMALIVMHKMMGLVMVG 2942
            +VK LFLGWFEPLREAI KEQ+ QQTKK K AFAPHIDLLPA+KMALIVMHK+MGLVM+G
Sbjct: 176  YVKALFLGWFEPLREAIAKEQKAQQTKKHKQAFAPHIDLLPADKMALIVMHKLMGLVMMG 235

Query: 2941 NHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKKTLAENDEGLSKEKEMLRKRIN 2762
            N DGCVQVVQAAV IGMAIEQEVRIHSFLEK+K+ QRKKT   +++GLSKEKE+LRKR+N
Sbjct: 236  NQDGCVQVVQAAVHIGMAIEQEVRIHSFLEKSKSLQRKKTSVADEDGLSKEKEILRKRVN 295

Query: 2761 GLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELLTETAYIQPPLDQSADSPPDVR 2582
            GL+RRKRL EVQKLL+KE+ KPWGRDTQAKLGSRLIELLTETA++QPPLDQ AD PPDVR
Sbjct: 296  GLIRRKRLVEVQKLLKKEDMKPWGRDTQAKLGSRLIELLTETAHVQPPLDQLADGPPDVR 355

Query: 2581 PAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTAKHMLIPYVPMLVPPRKWKGYD 2402
            PAFRHR K   K+PG KLVKNYGVIECDPL+L GLD TAKHMLIPYVPMLVPP++WKGYD
Sbjct: 356  PAFRHRLKAAAKSPGQKLVKNYGVIECDPLVLAGLDKTAKHMLIPYVPMLVPPKRWKGYD 415

Query: 2401 RGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEALDMLGNTKWRVNRRVLNVVESI 2222
            +GGHLFLPSYVMRTHGSRKQ + +  + G+QMQKV+EALDMLG+TKWR+N++VLNVVESI
Sbjct: 416  KGGHLFLPSYVMRTHGSRKQVDTMRNISGRQMQKVFEALDMLGSTKWRINKKVLNVVESI 475

Query: 2221 WARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRKAKKLNQERHSQRCDTELKLSV 2042
            WARGGNIAGLVDREDVP+PEKP SED TEIQ+WRWS RKAKKLNQERHSQRCDTELKLSV
Sbjct: 476  WARGGNIAGLVDREDVPVPEKPPSEDPTEIQEWRWSARKAKKLNQERHSQRCDTELKLSV 535

Query: 2041 ARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLKIH 1862
            AR+MKDE+GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGL WLKIH
Sbjct: 536  ARRMKDEDGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIH 595

Query: 1861 LANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGNRWWLTAEDPFQCLAACMSLSE 1682
            LANLY+GGVEKLSYDGR++FVDNHI++IFDSA NPVNGNRWWLTAEDP QCLAAC++LSE
Sbjct: 596  LANLYSGGVEKLSYDGRISFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSE 655

Query: 1681 ALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGDKPADVYSEIARRV 1502
            ALNS SP TVISHLPIHQDGSCNGLQHYAALGRD+LEAAAVNLVAG+KPADVYSEIA RV
Sbjct: 656  ALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAVRV 715

Query: 1501 HDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEK 1322
            HDIM RDSNKDP +NPNALLAKVL+NQ+DRKLVKQTVMTSVYGVTYVGAREQIKRRLEEK
Sbjct: 716  HDIMKRDSNKDPTTNPNALLAKVLVNQIDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEK 775

Query: 1321 GVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLGDCAKVIASENRPVRWITPLGL 1142
            G+ITDDR+LF+A+CYAAKVTLAALGEIF+AAR IMSWLGDCAKVIASEN+PVRW TPLGL
Sbjct: 776  GLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIASENQPVRWTTPLGL 835

Query: 1141 PVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAFPPNFVHSLDGSHMMMTALACR 962
            PVVQPYCK+ERHLIRT+LQVLALQRE + VDVR+QRTAFPPNFVHSLDGSHMMMTALACR
Sbjct: 836  PVVQPYCKSERHLIRTSLQVLALQRESNLVDVRKQRTAFPPNFVHSLDGSHMMMTALACR 895

Query: 961  DAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPILENLLEGFEASYPALKFPPLP 782
            DAG+RFAGVHDSFWTHACDVDQMNQILRE FVELYS PILENLLE F+A+YP L FPPLP
Sbjct: 896  DAGIRFAGVHDSFWTHACDVDQMNQILRENFVELYSKPILENLLESFQAAYPELTFPPLP 955

Query: 781  ERGDFDLHEVLESPYFFN 728
            ERGDFDL EVL+SPYFFN
Sbjct: 956  ERGDFDLQEVLKSPYFFN 973


>ref|XP_008452554.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Cucumis
            melo]
          Length = 975

 Score = 1501 bits (3886), Expect = 0.0
 Identities = 739/979 (75%), Positives = 837/979 (85%)
 Frame = -1

Query: 3664 MTSAASFYPSPPQAQISNSTWRKNNPPKANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 3485
            MT+ ASF+P+       ++ W+K  P K                                
Sbjct: 1    MTTTASFFPTLQAPIHGSNAWKK--PTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDST 58

Query: 3484 SDPIHFHPLSDSIQDNLVENLENSVNFQIPINEIGRVMPQESPSRIFIQDPPWIASLFLK 3305
            S P H  PL+DS+ +N  E L+NS+N QIP +EI ++  +ES  RIFIQDPPWIASLFLK
Sbjct: 59   SQPFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITREESGQRIFIQDPPWIASLFLK 118

Query: 3304 GIYKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERTVXXXXXXXXXXXXXKLAPNL 3125
            G+YK  Q+E+KLEF +IE+RKYNLLRRRQIKAETEAWE+ V             KLAPNL
Sbjct: 119  GLYKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNL 178

Query: 3124 PHVKLLFLGWFEPLREAIEKEQRVQQTKKQKAAFAPHIDLLPAEKMALIVMHKMMGLVMV 2945
            P+VK LFLGWFEPL++AIEKEQ+ Q++KKQKAAFAPHI+LL A+K+A+IVM+KMMGL+MV
Sbjct: 179  PYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMV 238

Query: 2944 GNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKKTLAENDEGLSKEKEMLRKRI 2765
               D CVQVVQAAVQIG AIEQEVRI SFLEK ++ QR K  A+  E LSKEKE+LRKR+
Sbjct: 239  AQQDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADT-ECLSKEKEVLRKRV 297

Query: 2764 NGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELLTETAYIQPPLDQSADSPPDV 2585
            NG +RR+RL EVQKLL+KEEFK WGRDTQAKLGSRLIELL E+A+IQPP+ QSADSPPDV
Sbjct: 298  NGFIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDV 357

Query: 2584 RPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTAKHMLIPYVPMLVPPRKWKGY 2405
            RPAF H FKP+ K PG   VK YGVIECDP++L GLD TAKHMLIPY+PMLVPP+KWKGY
Sbjct: 358  RPAFWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGY 417

Query: 2404 DRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEALDMLGNTKWRVNRRVLNVVES 2225
            D+GGH FLPSYVMRTHGS +QQ+A+  + GKQMQKV+EALDMLG+TKWRVNRRVL+VVES
Sbjct: 418  DKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVES 477

Query: 2224 IWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRKAKKLNQERHSQRCDTELKLS 2045
            +WA+GGN AGLVDR+DVP+PEK    DLTE Q+WRWS++KAKK+NQE HSQRCD ELKLS
Sbjct: 478  LWAQGGNTAGLVDRKDVPIPEKQLG-DLTETQEWRWSMKKAKKINQELHSQRCDVELKLS 536

Query: 2044 VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLKI 1865
            VARKMKDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGLHWLKI
Sbjct: 537  VARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKI 596

Query: 1864 HLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGNRWWLTAEDPFQCLAACMSLS 1685
            HLANLYAGGVEKLSYD RLAFVD+H++ IFDSA+NPVNG+RWWLTAEDPFQCLAACM+LS
Sbjct: 597  HLANLYAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLS 656

Query: 1684 EALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGDKPADVYSEIARR 1505
            EAL SS+P TVIS+LPIHQDGSCNGLQHYAALGRD+LEAAAVNLVAG+KPADVYSEIA R
Sbjct: 657  EALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAAR 716

Query: 1504 VHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEE 1325
            VH IMIRD+NKDP +NPNA LAK+LI+QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLEE
Sbjct: 717  VHTIMIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEE 776

Query: 1324 KGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLGDCAKVIASENRPVRWITPLG 1145
            KG+I+DDR+LF ASCYAAKVTLAALGEIFEAAR IM WLGDCAKVIA +N+PVRW TPLG
Sbjct: 777  KGLISDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLG 836

Query: 1144 LPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAFPPNFVHSLDGSHMMMTALAC 965
            LPVVQPY K+ERHLIRT+LQVLAL+REG+SVDVR+QRTAFPPNFVHSLDGSHMM+TALAC
Sbjct: 837  LPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALAC 896

Query: 964  RDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPILENLLEGFEASYPALKFPPL 785
            RDAGLRFAGVHDSFWTHACDVD+MN ILREKFVELYSMP+LE+LLEGFE +YP L FP L
Sbjct: 897  RDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSL 956

Query: 784  PERGDFDLHEVLESPYFFN 728
            PERGDF+L EVL SPYFFN
Sbjct: 957  PERGDFNLQEVLRSPYFFN 975


>ref|XP_004144791.2| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Cucumis
            sativus] gi|700205944|gb|KGN61063.1| hypothetical protein
            Csa_2G036610 [Cucumis sativus]
          Length = 975

 Score = 1493 bits (3865), Expect = 0.0
 Identities = 733/979 (74%), Positives = 836/979 (85%)
 Frame = -1

Query: 3664 MTSAASFYPSPPQAQISNSTWRKNNPPKANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 3485
            MT+ ASF+P+       ++ W+K  P K                                
Sbjct: 1    MTATASFFPTLQAPIHGSNAWKK--PTKRWKCERKTHTSFTSTFNSPLSSVSFPVNFDST 58

Query: 3484 SDPIHFHPLSDSIQDNLVENLENSVNFQIPINEIGRVMPQESPSRIFIQDPPWIASLFLK 3305
            S  +H  PL+DS+ +N  E L+NS+N QIPI+EI ++   ES  RIFIQDPPWIASLFLK
Sbjct: 59   SQSLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLK 118

Query: 3304 GIYKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERTVXXXXXXXXXXXXXKLAPNL 3125
            G+YK  Q+E+KLEF EIE+RKYNLLRRRQIKAETEAWE+ V             KLAPNL
Sbjct: 119  GLYKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNL 178

Query: 3124 PHVKLLFLGWFEPLREAIEKEQRVQQTKKQKAAFAPHIDLLPAEKMALIVMHKMMGLVMV 2945
            P+VK LFLGWFEPL+ AIE+EQ+ Q++KKQKAAFAPHI+LL A+KMA+IVM+KMMGL+M+
Sbjct: 179  PYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMM 238

Query: 2944 GNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKKTLAENDEGLSKEKEMLRKRI 2765
               DGCVQVVQAAVQIG AIEQEVRI S LEK ++ QR K  A+  E L+KEKE+LRK++
Sbjct: 239  AAQDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADT-ECLTKEKEVLRKQV 297

Query: 2764 NGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELLTETAYIQPPLDQSADSPPDV 2585
            NGL+RR++L EVQKLL+KEEFK WGRDTQAKLGSRLIELL E+A+IQPP+ QSADSPPD+
Sbjct: 298  NGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDI 357

Query: 2584 RPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTAKHMLIPYVPMLVPPRKWKGY 2405
            RPAF H FKP+ K PG   VK YGV+ECDP++L GLD TAKHMLIPY+PMLVPP+KWKGY
Sbjct: 358  RPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGY 417

Query: 2404 DRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEALDMLGNTKWRVNRRVLNVVES 2225
            D+GGH FLPSYVMRTHGS +QQ+A+  + GKQMQKV+EALDMLG+TKWRVNR VL+VVES
Sbjct: 418  DKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVES 477

Query: 2224 IWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRKAKKLNQERHSQRCDTELKLS 2045
            +WA+GGN AGLVDR+DVP+PEKP   DLTE+Q+WRWS++KAKK+NQE HSQRCD ELKLS
Sbjct: 478  LWAQGGNTAGLVDRKDVPIPEKPLG-DLTEMQEWRWSMKKAKKINQELHSQRCDVELKLS 536

Query: 2044 VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLKI 1865
            VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGLHWLKI
Sbjct: 537  VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKI 596

Query: 1864 HLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGNRWWLTAEDPFQCLAACMSLS 1685
            HLANLYAGGVEKLSYD RLAFVD+H++ IFDSA+NPVNG+RWWLTAEDPFQCLAACM+LS
Sbjct: 597  HLANLYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLS 656

Query: 1684 EALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGDKPADVYSEIARR 1505
            EAL SS+P TVIS+LPIHQDGSCNGLQHYAALGRD+LEAAAVNLVAG+KPADVYSEIA R
Sbjct: 657  EALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAAR 716

Query: 1504 VHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEE 1325
            VH IMIRD++KDP +NPNA LAK+LI+QVDRKLVKQTVMTSVYGVTY+GAREQIKRRLEE
Sbjct: 717  VHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEE 776

Query: 1324 KGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLGDCAKVIASENRPVRWITPLG 1145
            KG+I+DDR+ F ASCYAAKVTL+ALGEIFEAAR IM WLGDCAKVIA +N+PVRW TPLG
Sbjct: 777  KGLISDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLG 836

Query: 1144 LPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAFPPNFVHSLDGSHMMMTALAC 965
            LPVVQPY K+ERHLIRT+LQVLALQREG+ VDVR+QRTAFPPNFVHSLDGSHMM+TALAC
Sbjct: 837  LPVVQPYYKSERHLIRTSLQVLALQREGNLVDVRKQRTAFPPNFVHSLDGSHMMLTALAC 896

Query: 964  RDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPILENLLEGFEASYPALKFPPL 785
            RDAGLRFAGVHDSFWTHACDVD+MN ILREKFVELYSMP+LE+LLEGFE +YP L FP L
Sbjct: 897  RDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSL 956

Query: 784  PERGDFDLHEVLESPYFFN 728
            P RGDFDL EVL+SPYFFN
Sbjct: 957  PGRGDFDLQEVLKSPYFFN 975


>ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
            gi|508784240|gb|EOY31496.1| DNA/RNA polymerases
            superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score = 1488 bits (3851), Expect = 0.0
 Identities = 718/920 (78%), Positives = 827/920 (89%), Gaps = 2/920 (0%)
 Frame = -1

Query: 3481 DPIHFHPLSDSIQDNLVENLENSVNFQIPINEIGRVMPQESPSRIFIQDPPWIASLFLKG 3302
            +P  F PL DS+ DN VEN+EN  NF +P  +  +++  ES  R+FIQDPPWI++LFLKG
Sbjct: 60   NPARFCPLHDSLHDNFVENIENPSNFLLPKAQSHQILSPESTPRLFIQDPPWISALFLKG 119

Query: 3301 IYKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERTVXXXXXXXXXXXXXKLAPNLP 3122
            +YK T Q +K+E KEIE+RKYNLLRRRQ+K ETEAWE+ V             KLAPNLP
Sbjct: 120  LYKMTNQTVKIEHKEIEKRKYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKLAPNLP 179

Query: 3121 HVKLLFLGWFEPLREAIEKEQRVQQ--TKKQKAAFAPHIDLLPAEKMALIVMHKMMGLVM 2948
            +VK LFLGWFEP+REAI +EQ+VQ+  +KK +AA+APHI+LLPA+KMA+IVMHKMMGLVM
Sbjct: 180  YVKGLFLGWFEPMREAIAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMGLVM 239

Query: 2947 VGNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKKTLAENDEGLSKEKEMLRKR 2768
                +G VQVVQAAV IG+AIEQEVRIH+FLEKTKNYQRKKT  E  +GLSKEKE+L+KR
Sbjct: 240  GAQENGFVQVVQAAVHIGVAIEQEVRIHNFLEKTKNYQRKKTTDEV-QGLSKEKEILKKR 298

Query: 2767 INGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELLTETAYIQPPLDQSADSPPD 2588
            +N L+RR+RL EVQKL++ EE KPWGRD QAKLGSRL+ELLTETAY+QPP+DQS DSPPD
Sbjct: 299  VNSLIRRRRLVEVQKLVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPD 358

Query: 2587 VRPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTAKHMLIPYVPMLVPPRKWKG 2408
            V+PAFRH+FK I K+PG K++K YGVIECDPL+L+GLD +AKHMLIPYVPMLVPP+KWKG
Sbjct: 359  VQPAFRHKFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKG 418

Query: 2407 YDRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEALDMLGNTKWRVNRRVLNVVE 2228
            YD+GG+LFLPSYVMRTHGSRKQQ+A+  V  K+MQKV+EALD LG+TKWRVN++VL VVE
Sbjct: 419  YDKGGYLFLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVE 478

Query: 2227 SIWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRKAKKLNQERHSQRCDTELKL 2048
            SIWA GGNIAGLVDR D+P+PEKP+SED TE Q+W+WS+RKA K+N+ERHSQRCDTELKL
Sbjct: 479  SIWASGGNIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKL 538

Query: 2047 SVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLK 1868
            SVARKM++EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLG+SGLHWLK
Sbjct: 539  SVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLK 598

Query: 1867 IHLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGNRWWLTAEDPFQCLAACMSL 1688
            IHLANL+AGGVEKLS+DGRLAFVDNH+++IFDSA NP+NGNRWWLTAEDPFQCLAAC++L
Sbjct: 599  IHLANLFAGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINL 658

Query: 1687 SEALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGDKPADVYSEIAR 1508
            SE+L SSSP +V+S+LPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAG+KPADVYSEIA 
Sbjct: 659  SESLKSSSPHSVLSYLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAV 718

Query: 1507 RVHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLE 1328
            RVH+IM RDS+KDP +NPNA LAK+LI+QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLE
Sbjct: 719  RVHNIMKRDSDKDPATNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLE 778

Query: 1327 EKGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLGDCAKVIASENRPVRWITPL 1148
            EKG ITDDRVLF+A+CY AKVTLAALGE+F+AAR IM WLGDCAKVIASEN+PV+W TPL
Sbjct: 779  EKGHITDDRVLFAAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPL 838

Query: 1147 GLPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAFPPNFVHSLDGSHMMMTALA 968
            GLPVVQPY K+ERHLIRT+LQVLALQREGDSV+VR+QRTAFPPNFVHSLDGSHMMMTA+A
Sbjct: 839  GLPVVQPYYKSERHLIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHMMMTAVA 898

Query: 967  CRDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPILENLLEGFEASYPALKFPP 788
            CRDAGL FAGVHDSFWTHACDV++MNQILREKFVELYSMP+LENL E  + SYP+L FPP
Sbjct: 899  CRDAGLHFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLENLFESVQTSYPSLVFPP 958

Query: 787  LPERGDFDLHEVLESPYFFN 728
            LPERG+FDL EVL+SPYFFN
Sbjct: 959  LPERGNFDLREVLKSPYFFN 978


>ref|XP_012445978.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Gossypium
            raimondii] gi|763786877|gb|KJB53873.1| hypothetical
            protein B456_009G009300 [Gossypium raimondii]
          Length = 972

 Score = 1483 bits (3839), Expect = 0.0
 Identities = 720/919 (78%), Positives = 818/919 (89%), Gaps = 2/919 (0%)
 Frame = -1

Query: 3478 PIHFHPLSDSIQDNLVENLENSVNFQIPINEIGRVMPQESPSRIFIQDPPWIASLFLKGI 3299
            P  F PL DS+QDN+V+N+EN     +P     +++  ES  RIFIQDPPWI++LF KG+
Sbjct: 55   PPRFLPLCDSLQDNIVQNIENPKKLLLPNAHSRQILSPESAPRIFIQDPPWISALFWKGL 114

Query: 3298 YKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERTVXXXXXXXXXXXXXKLAPNLPH 3119
            YK T Q +K+E KEIE+RKYNLLRRRQ+K ETEAWE+ V             KLAPNLP+
Sbjct: 115  YKMTNQTVKIEHKEIEKRKYNLLRRRQVKEETEAWEKMVEEYRELEREMCEKKLAPNLPY 174

Query: 3118 VKLLFLGWFEPLREAIEKEQRVQQ--TKKQKAAFAPHIDLLPAEKMALIVMHKMMGLVMV 2945
            VK LFLGWFEPLREAI KEQ+VQ+   KK +AA+APHI+LLPA+K+A+IVMHKMMGLVM 
Sbjct: 175  VKGLFLGWFEPLREAIAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMMGLVMG 234

Query: 2944 GNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKKTLAENDEGLSKEKEMLRKRI 2765
               DG VQVVQAAV IG+AIEQEVRIHSFLEKTKNYQRK+ + +  +G SKEKE+LRKR+
Sbjct: 235  AEEDGYVQVVQAAVHIGVAIEQEVRIHSFLEKTKNYQRKQ-IVDEVQGASKEKEILRKRV 293

Query: 2764 NGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELLTETAYIQPPLDQSADSPPDV 2585
            N L+RR+RL+EVQKL++ EE KPWGRD QAKLGSRL+ELLTETAY+QPP+DQS DSP DV
Sbjct: 294  NSLIRRRRLTEVQKLVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPLDV 353

Query: 2584 RPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTAKHMLIPYVPMLVPPRKWKGY 2405
            RPAFRH+FK I + PG K+ K YGVIECDPL+ +GLD +AKHM+IPYVPMLVPP+KWKGY
Sbjct: 354  RPAFRHKFKTISRGPGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPKKWKGY 413

Query: 2404 DRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEALDMLGNTKWRVNRRVLNVVES 2225
            D+GG+LFLPSYVMRTHGSRKQQ A+  V  K M+KV+EALD LG+TKWRVN +VL VVES
Sbjct: 414  DKGGYLFLPSYVMRTHGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVLAVVES 473

Query: 2224 IWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRKAKKLNQERHSQRCDTELKLS 2045
            IWA GGNIAGLVDR D+P+PEKP SED TEIQ+W+WS+RKA K+N+ERHSQRCDTELKLS
Sbjct: 474  IWASGGNIAGLVDRNDIPIPEKPYSEDSTEIQEWKWSVRKANKVNRERHSQRCDTELKLS 533

Query: 2044 VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLKI 1865
            VARKM++EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLG+SGLHWLKI
Sbjct: 534  VARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKI 593

Query: 1864 HLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGNRWWLTAEDPFQCLAACMSLS 1685
            HLANLY+GGVEKLS+DGRLAFVDNH++EIFDSA NP+NGNRWWLTAEDPFQCLAACM+LS
Sbjct: 594  HLANLYSGGVEKLSHDGRLAFVDNHLDEIFDSAENPINGNRWWLTAEDPFQCLAACMNLS 653

Query: 1684 EALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGDKPADVYSEIARR 1505
            EAL S+SP ++IS+LPIHQDGSCNGLQHYAALGRD+LEAAAVNLVAG+KPADVYSEIA R
Sbjct: 654  EALKSTSPHSMISYLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVYSEIAVR 713

Query: 1504 VHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEE 1325
            VH+IM RDSNKDP +NPNALLAK+LI+QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEE
Sbjct: 714  VHNIMKRDSNKDPATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEE 773

Query: 1324 KGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLGDCAKVIASENRPVRWITPLG 1145
            KG ITDDR+LFSA+CY AKVTLAALGE+F+AAR IM WLGDCAKVIASEN+PVRW TPLG
Sbjct: 774  KGHITDDRLLFSAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRWTTPLG 833

Query: 1144 LPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAFPPNFVHSLDGSHMMMTALAC 965
            LPVVQPY K+ERHLIRTTLQVLALQREG+SV+VR+QRTAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 834  LPVVQPYYKSERHLIRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMMTAVAC 893

Query: 964  RDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPILENLLEGFEASYPALKFPPL 785
            RDAGL FAGVHDSFWTHACDV++MNQILREKFVELYSMP+LENLLE FE SYP L FPPL
Sbjct: 894  RDAGLYFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLENLLESFETSYPTLVFPPL 953

Query: 784  PERGDFDLHEVLESPYFFN 728
            PERG+FDL EVL+SPYFFN
Sbjct: 954  PERGNFDLREVLKSPYFFN 972


>ref|XP_011018068.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Populus
            euphratica]
          Length = 983

 Score = 1483 bits (3839), Expect = 0.0
 Identities = 716/924 (77%), Positives = 820/924 (88%), Gaps = 10/924 (1%)
 Frame = -1

Query: 3469 FHPLSDSIQDNLVENLENSVNFQIP----------INEIGRVMPQESPSRIFIQDPPWIA 3320
            FHPL DS  D L+E+      F+IP          + +  ++M  ES  R+FIQDPPWI+
Sbjct: 66   FHPLHDSSHDRLLED------FEIPTICSHQKLETLIKFDQIMHGESSKRVFIQDPPWIS 119

Query: 3319 SLFLKGIYKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERTVXXXXXXXXXXXXXK 3140
            + F KG+YK   +++K+EFK+IE+RKYNLLRRRQI+ ETEAWER               K
Sbjct: 120  AHFWKGVYKIANKKVKVEFKDIEKRKYNLLRRRQIREETEAWERMADEYRGLVREMCERK 179

Query: 3139 LAPNLPHVKLLFLGWFEPLREAIEKEQRVQQTKKQKAAFAPHIDLLPAEKMALIVMHKMM 2960
            LAPNLP+VK L LGWFEPL+EAIEKEQ+++++KKQK+AF+P+I+LLPA+KMA+IVMHKMM
Sbjct: 180  LAPNLPYVKGLLLGWFEPLKEAIEKEQKMEKSKKQKSAFSPNIELLPADKMAVIVMHKMM 239

Query: 2959 GLVMVGNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKKTLAENDEGLSKEKEM 2780
            GL+MVG+ DGCV+VVQAAVQIGMAIEQEVRIH+FLEKTKN+QRKKT+ +  E + KEKEM
Sbjct: 240  GLLMVGHEDGCVRVVQAAVQIGMAIEQEVRIHNFLEKTKNHQRKKTMHDVQESMDKEKEM 299

Query: 2779 LRKRINGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELLTETAYIQPPLDQSAD 2600
            LRKR+N L+RRKRL EVQ L++++E KPW R TQAKLGSRLIELLTETAY+QPP++QS D
Sbjct: 300  LRKRVNSLIRRKRLMEVQNLVKQDETKPWSRGTQAKLGSRLIELLTETAYVQPPVNQSED 359

Query: 2599 SPPDVRPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTAKHMLIPYVPMLVPPR 2420
             PPDVRPAFRH FK + KNPG K+VK YGVIECDPL+LTGLDGTAKHMLIPY PMLVPP+
Sbjct: 360  IPPDVRPAFRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPK 419

Query: 2419 KWKGYDRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEALDMLGNTKWRVNRRVL 2240
            KWKGYD+GGHLFLPSY+MRTHGSR+QQ A+ +VPGKQMQKV+EALD LGNTKWRVNRR+L
Sbjct: 420  KWKGYDKGGHLFLPSYIMRTHGSRQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLL 479

Query: 2239 NVVESIWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRKAKKLNQERHSQRCDT 2060
            +VVE IW  GGNIAGLVDRED+P+PEKP+S+DLTEIQKW+WS+RKAKK+NQERHSQRCDT
Sbjct: 480  DVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDT 539

Query: 2059 ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGL 1880
            ELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHL HLSSDLCRG+LEF EGRPLGKSGL
Sbjct: 540  ELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGL 599

Query: 1879 HWLKIHLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGNRWWLTAEDPFQCLAA 1700
             WLKIHLANLY+GGVEKLS+DGRLAFV+NH++EIFDSA NPVNG RWWL AEDPFQCLAA
Sbjct: 600  RWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAA 659

Query: 1699 CMSLSEALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGDKPADVYS 1520
            C++LSEALNS+SP TVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVA +KP+DVYS
Sbjct: 660  CINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAAEKPSDVYS 719

Query: 1519 EIARRVHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMTSVYGVTYVGAREQIK 1340
            EIA RVH+I+ RDSNKDP +NP+ALLAK+L++QVDRKLVKQTVMTSVYGVTYVGAREQIK
Sbjct: 720  EIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQTVMTSVYGVTYVGAREQIK 779

Query: 1339 RRLEEKGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLGDCAKVIASENRPVRW 1160
            RRLEEKG ITDDR+LFSA+CY AKVTL ALGE+F+AAR IMSWLGDCAK+IASE++PV+W
Sbjct: 780  RRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAARDIMSWLGDCAKIIASEDQPVQW 839

Query: 1159 ITPLGLPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAFPPNFVHSLDGSHMMM 980
             TPLGLPVVQPY K ERHLI+T+LQ+LALQREG SV VR+QRTAFPPNFVHSLDGSHMMM
Sbjct: 840  TTPLGLPVVQPYYKRERHLIKTSLQILALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMM 899

Query: 979  TALACRDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPILENLLEGFEASYPAL 800
            TA+ACRDAGL FAGVHDSFWTHA DVD MN+ILREKFVELY+MPILENLLE F+ SYP L
Sbjct: 900  TAVACRDAGLCFAGVHDSFWTHARDVDLMNRILREKFVELYNMPILENLLEDFQTSYPTL 959

Query: 799  KFPPLPERGDFDLHEVLESPYFFN 728
            KFPPLPERG+FDL +VL SPYFFN
Sbjct: 960  KFPPLPERGNFDLQKVLRSPYFFN 983


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus
            sinensis]
          Length = 1009

 Score = 1479 bits (3829), Expect = 0.0
 Identities = 714/945 (75%), Positives = 820/945 (86%), Gaps = 27/945 (2%)
 Frame = -1

Query: 3481 DPIHFHPLSDSIQDNLVENLENSVNFQIPINEIGRVMPQ--------------------- 3365
            +P    PL DSIQ N +EN+ENSV+F IP  E  ++  Q                     
Sbjct: 68   NPTRLRPLQDSIQSNFMENIENSVDFHIPTCEQEQIFHQRVENTETCADLVIPRSENSTN 127

Query: 3364 ------ESPSRIFIQDPPWIASLFLKGIYKRTQQELKLEFKEIERRKYNLLRRRQIKAET 3203
                  E   RIF+QDPPW +S+FLKG+YKR + +   E++E+++RK+NLLRRRQ+K ET
Sbjct: 128  HQLMCLEPRRRIFVQDPPWFSSIFLKGLYKRIKLQ---EYREMKKRKFNLLRRRQVKQET 184

Query: 3202 EAWERTVXXXXXXXXXXXXXKLAPNLPHVKLLFLGWFEPLREAIEKEQRVQQTKKQKAAF 3023
            EAWER V             +LAPNLPH+K LFLGWF PLREAIE+EQ++Q+TKKQKAA+
Sbjct: 185  EAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPLREAIEREQKMQRTKKQKAAY 244

Query: 3022 APHIDLLPAEKMALIVMHKMMGLVMVGNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTK 2843
            APHI+LLPA+K+A+IVMHKMMGLVM G+ D CVQVVQAAV IGMAIEQE+RIHSFLEKTK
Sbjct: 245  APHIELLPADKVAVIVMHKMMGLVMAGHEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTK 304

Query: 2842 NYQRKKTLAENDEGLSKEKEMLRKRINGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGS 2663
            NY+RKK +A+ +E LSKEKE+LRKR+N L++ KR+ E QKLL+ EE KPWGRDTQAKLGS
Sbjct: 305  NYKRKKIIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEETKPWGRDTQAKLGS 364

Query: 2662 RLIELLTETAYIQPPLDQSADSPPDVRPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLT 2483
            RL+ELL ETAY+Q P++ +  SPPDVRPAFRHRFK I+K+PG K  K YGV+ECDPL+L 
Sbjct: 365  RLVELLIETAYVQHPVNPADYSPPDVRPAFRHRFKTILKHPGQKTTKRYGVVECDPLVLA 424

Query: 2482 GLDGTAKHMLIPYVPMLVPPRKWKGYDRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQ 2303
            GLD +AKHMLIPYVPMLVPP+KWKGY++GG+LFLPSYVMRTHGSRKQQ A+ +V G  M+
Sbjct: 425  GLDRSAKHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMK 484

Query: 2302 KVYEALDMLGNTKWRVNRRVLNVVESIWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKW 2123
            KV+EALD LG+TKWRVN++VL+V+ESIW  GGNIAGLVDR DVP+PEKP SED+TE+QKW
Sbjct: 485  KVFEALDTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVPIPEKPLSEDMTEVQKW 544

Query: 2122 RWSLRKAKKLNQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLS 1943
            +WS+RKAKK+NQERHSQRCDTELKLSVAR+MKDEEGFYYPHNLDFRGRAYPMHPHLNHLS
Sbjct: 545  KWSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLS 604

Query: 1942 SDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDGRLAFVDNHINEIFDSAN 1763
            SD+CRG+LEFAEGRPLGKSGL WLKIHLANL++GGVEKLS+DGRLAFV+NH+ EIFDSA 
Sbjct: 605  SDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAE 664

Query: 1762 NPVNGNRWWLTAEDPFQCLAACMSLSEALNSSSPLTVISHLPIHQDGSCNGLQHYAALGR 1583
            NP+NG+RWWLTAEDPFQCLAAC++LSEAL SSSP +VISHLPIHQDGSCNGLQHYAALGR
Sbjct: 665  NPINGSRWWLTAEDPFQCLAACINLSEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGR 724

Query: 1582 DSLEAAAVNLVAGDKPADVYSEIARRVHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLV 1403
            ++LEAAAVNLVAG+KPADVYSEIA RVH+IM RDSNKDP  +P ALLAK+LI+QVDRKLV
Sbjct: 725  NTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDPSKHPQALLAKILIDQVDRKLV 784

Query: 1402 KQTVMTSVYGVTYVGAREQIKRRLEEKGVITDDRVLFSASCYAAKVTLAALGEIFEAARA 1223
            KQTVMTSVYGVT+VGAREQIKRRLEEKG ITDDR LF+A+CYAAKVTL ALGEIFEAAR+
Sbjct: 785  KQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARS 844

Query: 1222 IMSWLGDCAKVIASENRPVRWITPLGLPVVQPYCKTERHLIRTTLQVLALQREGDSVDVR 1043
            IM WLGDCAKVIASEN+PVRW TPLGLPVVQPYCK ERHLIRT+LQVLALQREG SV++R
Sbjct: 845  IMGWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGKSVEIR 904

Query: 1042 RQRTAFPPNFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTHACDVDQMNQILREKFVE 863
            +QRTAFPPNFVHSLDGSHMMMTA+ACRDAGL FAGVHDSFWTHACDVD+MNQILR+KFVE
Sbjct: 905  KQRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVE 964

Query: 862  LYSMPILENLLEGFEASYPALKFPPLPERGDFDLHEVLESPYFFN 728
            LY+MPILENLLE F+ SYP L FPPLPERG+FDL EVLESPYFFN
Sbjct: 965  LYNMPILENLLESFQTSYPTLSFPPLPERGNFDLEEVLESPYFFN 1009


>ref|XP_012071554.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Jatropha
            curcas]
          Length = 993

 Score = 1478 bits (3827), Expect = 0.0
 Identities = 713/925 (77%), Positives = 827/925 (89%), Gaps = 12/925 (1%)
 Frame = -1

Query: 3466 HPLSDSIQDNLVENLENS----------VNFQIPI--NEIGRVMPQESPSRIFIQDPPWI 3323
            HPL D+ +++L+E+++NS          + F +P   ++  +++ QESP R+FIQDPPWI
Sbjct: 70   HPLHDATEEHLLEDMDNSMPNLQNFENLIKFDLPSCSSQNHQILGQESPKRVFIQDPPWI 129

Query: 3322 ASLFLKGIYKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERTVXXXXXXXXXXXXX 3143
            ++LFLKG+YK   ++ K+EFK+IE+RKYNLLRRRQI+ ETEAWER               
Sbjct: 130  SALFLKGLYKVANRKFKVEFKDIEKRKYNLLRRRQIREETEAWERMADEYKGMVREMCDK 189

Query: 3142 KLAPNLPHVKLLFLGWFEPLREAIEKEQRVQQTKKQKAAFAPHIDLLPAEKMALIVMHKM 2963
            KLAPNLP+VK LFLGWFEPL+EAIE EQ++Q++KKQK+AFAPHI+LLPA+KMALIVMHKM
Sbjct: 190  KLAPNLPYVKGLFLGWFEPLKEAIEAEQKLQRSKKQKSAFAPHIELLPADKMALIVMHKM 249

Query: 2962 MGLVMVGNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKKTLAENDEGLSKEKE 2783
            MGL+MVG+ DGCV VVQAAVQIGMA+EQEVRIH+FLEKTK++QRK  + +  E LSKEKE
Sbjct: 250  MGLMMVGHEDGCVPVVQAAVQIGMAVEQEVRIHNFLEKTKSFQRKNAVGDAQESLSKEKE 309

Query: 2782 MLRKRINGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELLTETAYIQPPLDQSA 2603
            +LRKRIN L+RRKRL +VQKL+R EE KPWGRDTQAKLGSRL+ELL E+A++QPP++QS 
Sbjct: 310  VLRKRINNLIRRKRLIQVQKLVRNEETKPWGRDTQAKLGSRLVELLIESAFVQPPVNQSP 369

Query: 2602 DSPPDVRPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTAKHMLIPYVPMLVPP 2423
            D+ PDVRPAFRHRF+    NPG K++K YGVIECDPL+L GLDG+AKHM+IPY PMLVPP
Sbjct: 370  DTLPDVRPAFRHRFRTA-NNPGRKIMKRYGVIECDPLVLAGLDGSAKHMMIPYFPMLVPP 428

Query: 2422 RKWKGYDRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEALDMLGNTKWRVNRRV 2243
            +KWKGYD+GGH FLPS++MRTHGSRKQQ+A+  VPGK MQKV+EALD LGNTKWRVNRRV
Sbjct: 429  KKWKGYDKGGHFFLPSFLMRTHGSRKQQDALKHVPGKNMQKVFEALDTLGNTKWRVNRRV 488

Query: 2242 LNVVESIWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRKAKKLNQERHSQRCD 2063
            L+VVESIWA GGNIAGLVDR D+P+PEKP SEDLTEIQKWRWS+RKAKK+N+E HSQRCD
Sbjct: 489  LDVVESIWAGGGNIAGLVDRADIPIPEKPISEDLTEIQKWRWSMRKAKKINREMHSQRCD 548

Query: 2062 TELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSG 1883
            TELKLSVARK+KDE+GFYYPHNLDFRGRAYPMHPHL+HLSSDL RGILEFAEGRPLGKSG
Sbjct: 549  TELKLSVARKLKDEDGFYYPHNLDFRGRAYPMHPHLSHLSSDLSRGILEFAEGRPLGKSG 608

Query: 1882 LHWLKIHLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGNRWWLTAEDPFQCLA 1703
            LHWLKIHLANLY+GGV+KLS++GRLAFV+NH++EIFDSA NPV+G RWWL AEDPFQCLA
Sbjct: 609  LHWLKIHLANLYSGGVKKLSHEGRLAFVENHLDEIFDSAANPVHGKRWWLMAEDPFQCLA 668

Query: 1702 ACMSLSEALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGDKPADVY 1523
            AC++LSEAL SSSP  VISHLPIHQDGSCNGLQHYAALGR+SLEAAAVNLVAG+KPADVY
Sbjct: 669  ACINLSEALKSSSPYNVISHLPIHQDGSCNGLQHYAALGRNSLEAAAVNLVAGEKPADVY 728

Query: 1522 SEIARRVHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMTSVYGVTYVGAREQI 1343
            +EIA RVH+I+++DS+KDP +NPNALLAK+LI+QVDRKLVKQTVMTSVYGVTYVGAREQI
Sbjct: 729  TEIAVRVHEIILKDSSKDPATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQI 788

Query: 1342 KRRLEEKGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLGDCAKVIASENRPVR 1163
            KRRLEEKG ITDDR+LFSA+CY AKVT+ ALGE+F+AAR IMSWLGDCAKVIASE++PVR
Sbjct: 789  KRRLEEKGHITDDRLLFSAACYTAKVTMKALGELFQAARDIMSWLGDCAKVIASEDQPVR 848

Query: 1162 WITPLGLPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAFPPNFVHSLDGSHMM 983
            W TPLGLPVVQPY K++RHLIRT+LQVLALQREG SV+VR+QRTAFPPNFVHSLDGSHMM
Sbjct: 849  WTTPLGLPVVQPYFKSKRHLIRTSLQVLALQREGSSVEVRKQRTAFPPNFVHSLDGSHMM 908

Query: 982  MTALACRDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPILENLLEGFEASYPA 803
            MTA+ACRDA LRFAGVHDSFWTHACDVD MN+ILR+KFVELY MPILENLLE F+ SYPA
Sbjct: 909  MTAVACRDADLRFAGVHDSFWTHACDVDLMNRILRDKFVELYRMPILENLLEDFQTSYPA 968

Query: 802  LKFPPLPERGDFDLHEVLESPYFFN 728
            L FPPLPERG+FDL EVL+SPYFFN
Sbjct: 969  LTFPPLPERGNFDLQEVLKSPYFFN 993


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 882

 Score = 1470 bits (3806), Expect = 0.0
 Identities = 704/882 (79%), Positives = 802/882 (90%)
 Frame = -1

Query: 3373 MPQESPSRIFIQDPPWIASLFLKGIYKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAW 3194
            M  ES  ++FIQDPPWI++ F KG+YK   +++K+EFK+IE+RKYNLLRRRQI+ ETEAW
Sbjct: 1    MHGESSKKVFIQDPPWISAHFWKGMYKLANKKVKVEFKDIEKRKYNLLRRRQIREETEAW 60

Query: 3193 ERTVXXXXXXXXXXXXXKLAPNLPHVKLLFLGWFEPLREAIEKEQRVQQTKKQKAAFAPH 3014
            ER               KLAPNLP+VK L LGWFEPL+EAIEKEQ+++++KKQK+AF+P+
Sbjct: 61   ERMADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEAIEKEQKMEKSKKQKSAFSPN 120

Query: 3013 IDLLPAEKMALIVMHKMMGLVMVGNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQ 2834
            I+LLPA+KMA+IVMHKMMGL+MVG+ DGCV+VVQAAVQIGMAIEQEVRIH+FLEKTKNYQ
Sbjct: 121  IELLPADKMAVIVMHKMMGLLMVGHEDGCVRVVQAAVQIGMAIEQEVRIHNFLEKTKNYQ 180

Query: 2833 RKKTLAENDEGLSKEKEMLRKRINGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLI 2654
            RKKT+ E  E + KEKE+LRKR+N L+RRKRL EVQ L++++E KPW R TQAKLGSRLI
Sbjct: 181  RKKTMHEVQETMDKEKEVLRKRVNSLIRRKRLMEVQNLVKQDETKPWSRGTQAKLGSRLI 240

Query: 2653 ELLTETAYIQPPLDQSADSPPDVRPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLD 2474
            ELLTETAY+QPP++QS D PPDVRPAFRH FK + KNPG K+VK YGVIECDPL+LTGLD
Sbjct: 241  ELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLD 300

Query: 2473 GTAKHMLIPYVPMLVPPRKWKGYDRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVY 2294
            GTAKHMLIPY PMLVPP+KWKGYD+GGHLFLPSYVMRTHGSR+QQ A+ +VPGKQMQKV+
Sbjct: 301  GTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSRQQQVAVRSVPGKQMQKVF 360

Query: 2293 EALDMLGNTKWRVNRRVLNVVESIWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWS 2114
            EALD LGNTKWRVNRR+L+VVE IW  GGNIAGLVDRED+P+PEKP+S+DLTEIQKW+WS
Sbjct: 361  EALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWS 420

Query: 2113 LRKAKKLNQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDL 1934
            +RKAKK+NQERHSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHL HLSSDL
Sbjct: 421  VRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDL 480

Query: 1933 CRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPV 1754
            CRG+LEF EGRPLGKSGL WLKIHLANLY+GGVEKLS+DGRLAFV+NH++EIFDSA NPV
Sbjct: 481  CRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPV 540

Query: 1753 NGNRWWLTAEDPFQCLAACMSLSEALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSL 1574
            NG RWWL AEDPFQCLAAC++LSEALNS+SP TVISHLPIHQDGSCNGLQHYAALGRD+L
Sbjct: 541  NGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAALGRDTL 600

Query: 1573 EAAAVNLVAGDKPADVYSEIARRVHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQT 1394
            EAAAVNLVA +KP+DVYSEIA RVH+I+ RDSNKDP +NP+ALLAK+L++QVDRKLVKQT
Sbjct: 601  EAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQT 660

Query: 1393 VMTSVYGVTYVGAREQIKRRLEEKGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMS 1214
            VMTSVYGVTYVGAREQIKRRLEEKG ITDDR+LFSA+CY AKVTL ALGE+F+AAR IMS
Sbjct: 661  VMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAARDIMS 720

Query: 1213 WLGDCAKVIASENRPVRWITPLGLPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQR 1034
            WLGDCAK+IASE++PV+W TPLGLPVVQPY KTERHLI+T+LQ+LALQREG SV VR+QR
Sbjct: 721  WLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKTERHLIKTSLQILALQREGSSVQVRKQR 780

Query: 1033 TAFPPNFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYS 854
            TAFPPNFVHSLDGSHMMMTA+ACRDAGL FAGVHDSFWTHA DVD MN+ILREKFVELY+
Sbjct: 781  TAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHATDVDLMNRILREKFVELYN 840

Query: 853  MPILENLLEGFEASYPALKFPPLPERGDFDLHEVLESPYFFN 728
            MPILENLLE F+ SYP L+FPPLPERG+FDL +VL SPYFFN
Sbjct: 841  MPILENLLEDFQTSYPTLQFPPLPERGNFDLQKVLRSPYFFN 882


>gb|KJB53874.1| hypothetical protein B456_009G009300 [Gossypium raimondii]
          Length = 972

 Score = 1469 bits (3802), Expect = 0.0
 Identities = 714/917 (77%), Positives = 812/917 (88%), Gaps = 2/917 (0%)
 Frame = -1

Query: 3478 PIHFHPLSDSIQDNLVENLENSVNFQIPINEIGRVMPQESPSRIFIQDPPWIASLFLKGI 3299
            P  F PL DS+QDN+V+N+EN     +P     +++  ES  RIFIQDPPWI++LF KG+
Sbjct: 55   PPRFLPLCDSLQDNIVQNIENPKKLLLPNAHSRQILSPESAPRIFIQDPPWISALFWKGL 114

Query: 3298 YKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERTVXXXXXXXXXXXXXKLAPNLPH 3119
            YK T Q +K+E KEIE+RKYNLLRRRQ+K ETEAWE+ V             KLAPNLP+
Sbjct: 115  YKMTNQTVKIEHKEIEKRKYNLLRRRQVKEETEAWEKMVEEYRELEREMCEKKLAPNLPY 174

Query: 3118 VKLLFLGWFEPLREAIEKEQRVQQ--TKKQKAAFAPHIDLLPAEKMALIVMHKMMGLVMV 2945
            VK LFLGWFEPLREAI KEQ+VQ+   KK +AA+APHI+LLPA+K+A+IVMHKMMGLVM 
Sbjct: 175  VKGLFLGWFEPLREAIAKEQKVQKGKNKKLRAAYAPHIELLPADKLAVIVMHKMMGLVMG 234

Query: 2944 GNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKKTLAENDEGLSKEKEMLRKRI 2765
               DG VQVVQAAV IG+AIEQEVRIHSFLEKTKNYQRK+ + +  +G SKEKE+LRKR+
Sbjct: 235  AEEDGYVQVVQAAVHIGVAIEQEVRIHSFLEKTKNYQRKQ-IVDEVQGASKEKEILRKRV 293

Query: 2764 NGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELLTETAYIQPPLDQSADSPPDV 2585
            N L+RR+RL+EVQKL++ EE KPWGRD QAKLGSRL+ELLTETAY+QPP+DQS DSP DV
Sbjct: 294  NSLIRRRRLTEVQKLVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPLDV 353

Query: 2584 RPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTAKHMLIPYVPMLVPPRKWKGY 2405
            RPAFRH+FK I + PG K+ K YGVIECDPL+ +GLD +AKHM+IPYVPMLVPP+KWKGY
Sbjct: 354  RPAFRHKFKTISRGPGQKIKKRYGVIECDPLIRSGLDKSAKHMMIPYVPMLVPPKKWKGY 413

Query: 2404 DRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEALDMLGNTKWRVNRRVLNVVES 2225
            D+GG+LFLPSYVMRTHGSRKQQ A+  V  K M+KV+EALD LG+TKWRVN +VL VVES
Sbjct: 414  DKGGYLFLPSYVMRTHGSRKQQEALKGVNVKNMRKVFEALDTLGSTKWRVNNKVLAVVES 473

Query: 2224 IWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRKAKKLNQERHSQRCDTELKLS 2045
            IWA GGNIAGLVDR D+P+PEKP SED TEIQ+W+WS+RKA K+N+ERHSQRCDTELKLS
Sbjct: 474  IWASGGNIAGLVDRNDIPIPEKPYSEDSTEIQEWKWSVRKANKVNRERHSQRCDTELKLS 533

Query: 2044 VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLKI 1865
            VARKM++EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLG+SGLHWLKI
Sbjct: 534  VARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKI 593

Query: 1864 HLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGNRWWLTAEDPFQCLAACMSLS 1685
            HLANLY+GGVEKLS+DGRLAFVDNH++EIFDSA NP+NGNRWWLTAEDPFQCLAACM+LS
Sbjct: 594  HLANLYSGGVEKLSHDGRLAFVDNHLDEIFDSAENPINGNRWWLTAEDPFQCLAACMNLS 653

Query: 1684 EALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGDKPADVYSEIARR 1505
            EAL S+SP ++IS+LPIHQDGSCNGLQHYAALGRD+LEAAAVNLVAG+KPADVYSEIA R
Sbjct: 654  EALKSTSPHSMISYLPIHQDGSCNGLQHYAALGRDNLEAAAVNLVAGEKPADVYSEIAVR 713

Query: 1504 VHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEE 1325
            VH+IM RDSNKDP +NPNALLAK+LI+QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEE
Sbjct: 714  VHNIMKRDSNKDPATNPNALLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEE 773

Query: 1324 KGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLGDCAKVIASENRPVRWITPLG 1145
            KG ITDDR+LFSA+CY AKVTLAALGE+F+AAR IM WLGDCAKVIASEN+PVRW TPLG
Sbjct: 774  KGHITDDRLLFSAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVRWTTPLG 833

Query: 1144 LPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAFPPNFVHSLDGSHMMMTALAC 965
            LPVVQPY K+ERHLIRTTLQVLALQREG+SV+VR+QRTAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 834  LPVVQPYYKSERHLIRTTLQVLALQREGNSVEVRKQRTAFPPNFVHSLDGSHMMMTAVAC 893

Query: 964  RDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPILENLLEGFEASYPALKFPPL 785
            RDAGL FAGVHDSFWTHACDV++MNQILREKFVELYSMP+LENLLE FE SYP L FPPL
Sbjct: 894  RDAGLYFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLENLLESFETSYPTLVFPPL 953

Query: 784  PERGDFDLHEVLESPYF 734
            PERG+FDL  VL   +F
Sbjct: 954  PERGNFDLQTVLACTFF 970


>ref|XP_011033373.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Populus
            euphratica]
          Length = 982

 Score = 1466 bits (3795), Expect = 0.0
 Identities = 711/921 (77%), Positives = 814/921 (88%), Gaps = 4/921 (0%)
 Frame = -1

Query: 3478 PIHFHPLSDSIQDNLVENLE----NSVNFQIPINEIGRVMPQESPSRIFIQDPPWIASLF 3311
            P+ FHPL DS  D L+E+ E    N+      + +  +++  ES  R+FI+D PWI++L+
Sbjct: 62   PLLFHPLHDSSHDRLLEDFEIPTINNHQKLETLIKFDQIVHGESSKRVFIRDSPWISALY 121

Query: 3310 LKGIYKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERTVXXXXXXXXXXXXXKLAP 3131
             KG +K   +++KLE K+IE+RKYNLLRRRQI+ ETEAWER               KLAP
Sbjct: 122  WKGTHKIANKKVKLELKDIEKRKYNLLRRRQIREETEAWERMAEEYTGLVKEMCERKLAP 181

Query: 3130 NLPHVKLLFLGWFEPLREAIEKEQRVQQTKKQKAAFAPHIDLLPAEKMALIVMHKMMGLV 2951
            NLP+VK LFLGWFEPL+EAIE+EQ+++++KKQK+AF+P+I+LLPA+KMA+IVMHKMMGLV
Sbjct: 182  NLPYVKSLFLGWFEPLKEAIEREQKLEKSKKQKSAFSPYIELLPADKMAVIVMHKMMGLV 241

Query: 2950 MVGNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKKTLAENDEGLSKEKEMLRK 2771
            MVG+ DGCV+VVQAAVQIG+AIEQEVRIH+FLEKTKN+QRKKT+ +  E + KEKEMLRK
Sbjct: 242  MVGHEDGCVRVVQAAVQIGIAIEQEVRIHNFLEKTKNHQRKKTMHDVQESMDKEKEMLRK 301

Query: 2770 RINGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELLTETAYIQPPLDQSADSPP 2591
            R+N L+RRKRL EVQ L+ ++E KPW RD QAKLGSRLIELLTETAY+QPP DQS   PP
Sbjct: 302  RVNSLIRRKRLMEVQNLVIQDETKPWSRDKQAKLGSRLIELLTETAYVQPPADQSEGIPP 361

Query: 2590 DVRPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTAKHMLIPYVPMLVPPRKWK 2411
            DVRPAFRH FK + KNPG K VK YGVIECDPL+LTGLDGTAKHMLIPY PMLVPP+KW+
Sbjct: 362  DVRPAFRHIFKSVTKNPGQKTVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWR 421

Query: 2410 GYDRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEALDMLGNTKWRVNRRVLNVV 2231
            GYD+GGHLFLPSY+MRTHGSR+QQ+A+ +VPGKQMQKV+EALD LGNTKWRVN +VL+VV
Sbjct: 422  GYDKGGHLFLPSYIMRTHGSRQQQDAVRSVPGKQMQKVFEALDTLGNTKWRVNGKVLDVV 481

Query: 2230 ESIWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRKAKKLNQERHSQRCDTELK 2051
            E IWA GGN AGLV+R D+P+PEKP+S+DLTEIQKW+WS+RKAKK+NQERHSQRCDTELK
Sbjct: 482  ERIWASGGNNAGLVNRGDIPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELK 541

Query: 2050 LSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWL 1871
            LSVARK+KDEEGFYYPHNLDFRGRAYPMHPHL HLSSDLCRG+LEFAEGRPLGKSGL WL
Sbjct: 542  LSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFAEGRPLGKSGLCWL 601

Query: 1870 KIHLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGNRWWLTAEDPFQCLAACMS 1691
            KIHLANLY+GGVEKLS+DGRLAFV+NH++EIFDSA NPVNG RWWLTAEDPFQCLAAC++
Sbjct: 602  KIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAENPVNGKRWWLTAEDPFQCLAACIN 661

Query: 1690 LSEALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGDKPADVYSEIA 1511
            LSEAL S+SP TVISHLPIHQDGSCNGLQHYAALG DS EAAAVNLVA +KP+DVYSEIA
Sbjct: 662  LSEALKSTSPHTVISHLPIHQDGSCNGLQHYAALGGDSQEAAAVNLVAAEKPSDVYSEIA 721

Query: 1510 RRVHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL 1331
             RVH+I+ +DSNKDP +NP+ALLAKVLI++VDRKLVKQTVMTSVYGVTYVGAREQIKRRL
Sbjct: 722  ARVHEIIRKDSNKDPATNPHALLAKVLIDEVDRKLVKQTVMTSVYGVTYVGAREQIKRRL 781

Query: 1330 EEKGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLGDCAKVIASENRPVRWITP 1151
            EEKG ITDDR+LFSA+CYAAKVTL ALGE+F+AAR IM WLGDCAKVIASE++PVRW TP
Sbjct: 782  EEKGHITDDRLLFSAACYAAKVTLTALGELFQAARDIMGWLGDCAKVIASEDQPVRWTTP 841

Query: 1150 LGLPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAFPPNFVHSLDGSHMMMTAL 971
            LGLPVVQPY KT+RHLIRT+LQVLALQREG SV VR+QRTAFPPNFVHSLDGSHMMMTA+
Sbjct: 842  LGLPVVQPYYKTQRHLIRTSLQVLALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAV 901

Query: 970  ACRDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPILENLLEGFEASYPALKFP 791
            ACRDA LRFAGVHDSFWTHA DVD MN+ILREKFVELY+MPILENLLE F+ SYP LKFP
Sbjct: 902  ACRDADLRFAGVHDSFWTHARDVDLMNRILREKFVELYNMPILENLLEDFQTSYPTLKFP 961

Query: 790  PLPERGDFDLHEVLESPYFFN 728
             LPERG+FDL EVL SPYFFN
Sbjct: 962  SLPERGNFDLQEVLRSPYFFN 982


>gb|KDO62286.1| hypothetical protein CISIN_1g001795mg [Citrus sinensis]
            gi|641843387|gb|KDO62287.1| hypothetical protein
            CISIN_1g001795mg [Citrus sinensis]
          Length = 1012

 Score = 1466 bits (3795), Expect = 0.0
 Identities = 710/939 (75%), Positives = 818/939 (87%), Gaps = 27/939 (2%)
 Frame = -1

Query: 3463 PLSDSIQDNLVENLENSVNFQIPINEIGR---------------VMPQESPS-------- 3353
            PL DSIQ N +EN+ENSV+F IP  E  +               V+P+   S        
Sbjct: 77   PLQDSIQSNFMENIENSVDFHIPTCEQEQNFHQRVENTETCADLVIPRSENSTNHQLMCL 136

Query: 3352 ----RIFIQDPPWIASLFLKGIYKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERT 3185
                RIF+QDPPW +S+FLKG+YKR + +   E++E+++RK+NLLRRRQ+K ETEAWER 
Sbjct: 137  EPRRRIFVQDPPWFSSIFLKGLYKRIKLQ---EYREMKKRKFNLLRRRQVKQETEAWERM 193

Query: 3184 VXXXXXXXXXXXXXKLAPNLPHVKLLFLGWFEPLREAIEKEQRVQQTKKQKAAFAPHIDL 3005
            V             +LAPNLPH+K LFLGWF PL EAIE+EQ++Q+TKKQKAA+APHI+L
Sbjct: 194  VDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIEL 253

Query: 3004 LPAEKMALIVMHKMMGLVMVGNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKK 2825
            LPA+K+A+IVMHKMMGLVM G+ D CVQVVQAAV IGMAIEQE+RIHSFLEKTKNY+RKK
Sbjct: 254  LPADKVAVIVMHKMMGLVMAGHEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKK 313

Query: 2824 TLAENDEGLSKEKEMLRKRINGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELL 2645
             +A+ +E LSKEKE+LRKR+N L++ KR+ E QKLL+ EE KPWGRDTQAKLGSRL+ELL
Sbjct: 314  IIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEETKPWGRDTQAKLGSRLVELL 373

Query: 2644 TETAYIQPPLDQSADSPPDVRPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTA 2465
             ETAY+Q P++ +  SPPDVRPAFRHRFK I+K+PG K  K YGV+ECDPL+L GLD +A
Sbjct: 374  IETAYVQHPVNPADYSPPDVRPAFRHRFKTILKHPGQKTTKRYGVVECDPLVLEGLDRSA 433

Query: 2464 KHMLIPYVPMLVPPRKWKGYDRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEAL 2285
            KHMLIPYVPMLVPP+KWKGY++GG+LFLPSYVMRTHGSRKQQ A+ +V G  M+KV+EAL
Sbjct: 434  KHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEAL 493

Query: 2284 DMLGNTKWRVNRRVLNVVESIWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRK 2105
            D LG+TKWRVN++VL+V+ESIW  GGNIAGLVDR DV +PEKP SED+TE+QKW+WS+RK
Sbjct: 494  DTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRK 553

Query: 2104 AKKLNQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG 1925
            AKK+NQERHSQRCDTELKLSVAR+MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD+CRG
Sbjct: 554  AKKINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRG 613

Query: 1924 ILEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGN 1745
            +LEFAEGRPLGKSGL WLKIHLANL++GGVEKLS+DGRLAFV+NH+ EIFDSA NP+NG+
Sbjct: 614  VLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGS 673

Query: 1744 RWWLTAEDPFQCLAACMSLSEALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAA 1565
            RWWLTAEDPFQCLAAC++LSEAL SSSP +VISHLPIHQDGSCNGLQHYAALGR++LEAA
Sbjct: 674  RWWLTAEDPFQCLAACINLSEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAA 733

Query: 1564 AVNLVAGDKPADVYSEIARRVHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMT 1385
            AVNLVAG+KPADVYSEIA RVH+IM RDSNKDP  +P ALLAK+LI+QVDRKLVKQTVMT
Sbjct: 734  AVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDPSKHPQALLAKILIDQVDRKLVKQTVMT 793

Query: 1384 SVYGVTYVGAREQIKRRLEEKGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLG 1205
            SVYGVT+VGAREQIKRRLEEKG ITDDR LF+A+CYAAKVTL ALGEIFEAAR+IM WLG
Sbjct: 794  SVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLG 853

Query: 1204 DCAKVIASENRPVRWITPLGLPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAF 1025
            DCAKVIASEN+PVRW TPLGLPVVQPYCK ERHLIRT+LQVLALQREG+ V++R+QRTAF
Sbjct: 854  DCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGNLVEIRKQRTAF 913

Query: 1024 PPNFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPI 845
            PPNFVHSLDGSHMMMTA+ACRDAGL FAGVHDSFWTHACDVD+MNQILR+KFVELY+MP+
Sbjct: 914  PPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPM 973

Query: 844  LENLLEGFEASYPALKFPPLPERGDFDLHEVLESPYFFN 728
            LENLLE F+ SYP L FPPLPERG+FDL EVLESPYFFN
Sbjct: 974  LENLLESFQTSYPTLSFPPLPERGNFDLEEVLESPYFFN 1012


>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
            gi|222854390|gb|EEE91937.1| hypothetical protein
            POPTR_0006s19490g [Populus trichocarpa]
          Length = 982

 Score = 1466 bits (3795), Expect = 0.0
 Identities = 712/921 (77%), Positives = 814/921 (88%), Gaps = 4/921 (0%)
 Frame = -1

Query: 3478 PIHFHPLSDSIQDNLVENLE----NSVNFQIPINEIGRVMPQESPSRIFIQDPPWIASLF 3311
            P+ FHPL DS  D L+E+ E    N+      + +  +++  ES  R+FI+D PWI++L+
Sbjct: 62   PLLFHPLHDSSHDRLLEDFEIPTINNHQKLETLIKFDQIVHGESSKRVFIRDSPWISALY 121

Query: 3310 LKGIYKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERTVXXXXXXXXXXXXXKLAP 3131
             KG +K   +++KLE K+IE+RKYNLLRRRQI+ ETEAWER               KLAP
Sbjct: 122  WKGTHKIANKKVKLELKDIEKRKYNLLRRRQIREETEAWERMAEEYTGLVKEMCERKLAP 181

Query: 3130 NLPHVKLLFLGWFEPLREAIEKEQRVQQTKKQKAAFAPHIDLLPAEKMALIVMHKMMGLV 2951
            NLP+VK LFLGWFEPL+EAIE+EQ+++++KKQK+AF+P+I+LLPA+KMA+IVMHKMMGLV
Sbjct: 182  NLPYVKSLFLGWFEPLKEAIEREQKLEKSKKQKSAFSPNIELLPADKMAVIVMHKMMGLV 241

Query: 2950 MVGNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKKTLAENDEGLSKEKEMLRK 2771
            MVG+ DGCV+VVQAAVQIG+AIEQEVRIH+FLEKTKN+QRKKT+ +  E + KEKEMLRK
Sbjct: 242  MVGHEDGCVRVVQAAVQIGIAIEQEVRIHNFLEKTKNHQRKKTMHDVQESMDKEKEMLRK 301

Query: 2770 RINGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELLTETAYIQPPLDQSADSPP 2591
            R+N L+RRKRL EVQ L+ ++E KPW RD QAKLGSRLIELLTETAY+QPP+DQS   PP
Sbjct: 302  RVNSLIRRKRLMEVQNLVIQDETKPWNRDKQAKLGSRLIELLTETAYVQPPVDQSEGIPP 361

Query: 2590 DVRPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTAKHMLIPYVPMLVPPRKWK 2411
            DVRPAFRH FK + KNPG K VK YGVIECDPL+LTGLDGTAKHMLIPY PMLVPP+KW+
Sbjct: 362  DVRPAFRHIFKSVTKNPGQKTVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKKWR 421

Query: 2410 GYDRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEALDMLGNTKWRVNRRVLNVV 2231
            GYD+GGHLFLPSY+MRTHGSR+QQ+A+ +VPGKQMQKV+EALD LGNTKWRVN +VL+VV
Sbjct: 422  GYDKGGHLFLPSYIMRTHGSRQQQDAVRSVPGKQMQKVFEALDTLGNTKWRVNGKVLDVV 481

Query: 2230 ESIWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRKAKKLNQERHSQRCDTELK 2051
            E IWA GGN AGLV+R D+P+PEK +S+DLTEIQKW+WS+RKAKK+NQERHSQRCDTELK
Sbjct: 482  ERIWASGGNNAGLVNRGDIPIPEKLSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTELK 541

Query: 2050 LSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWL 1871
            LSVARK+KDEEGFYYPHNLDFRGRAYPMHPHL HLSSDLCRG+LEFAEGRPLGKSGL WL
Sbjct: 542  LSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFAEGRPLGKSGLCWL 601

Query: 1870 KIHLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGNRWWLTAEDPFQCLAACMS 1691
            KIHLANLY+GGVEKLS+DGRLAFV+NH++EIFDSA NPVNG RWWLTAEDPFQCLAAC++
Sbjct: 602  KIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAENPVNGKRWWLTAEDPFQCLAACIN 661

Query: 1690 LSEALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGDKPADVYSEIA 1511
            LSEAL S+SP TVISHLPIHQDGSCNGLQHYAALGRDS EAAAVNLVA +KP+DVYSEIA
Sbjct: 662  LSEALKSASPHTVISHLPIHQDGSCNGLQHYAALGRDSQEAAAVNLVAAEKPSDVYSEIA 721

Query: 1510 RRVHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRL 1331
             RVH+I+ RDSNKDP +NP+ALLAKVLI++VDRKLVKQTVMTSVYGVTYVGAREQIKRRL
Sbjct: 722  TRVHEIIRRDSNKDPATNPHALLAKVLIDEVDRKLVKQTVMTSVYGVTYVGAREQIKRRL 781

Query: 1330 EEKGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLGDCAKVIASENRPVRWITP 1151
            EEKG ITDDRVLFSA+CYAAKVTL ALGE+F+AAR IM WLGDCAKVIASE++PVRW TP
Sbjct: 782  EEKGHITDDRVLFSAACYAAKVTLTALGELFQAARDIMGWLGDCAKVIASEDQPVRWTTP 841

Query: 1150 LGLPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAFPPNFVHSLDGSHMMMTAL 971
            LGLPVVQPY KT+RHLIRT+LQVLALQREG SV VR+QRTAFPPNFVHSLDGSHMMMTA+
Sbjct: 842  LGLPVVQPYYKTQRHLIRTSLQVLALQREGSSVQVRKQRTAFPPNFVHSLDGSHMMMTAV 901

Query: 970  ACRDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPILENLLEGFEASYPALKFP 791
            ACRDA LRFAGVHDSFWTHA D D MN+ILREKFVELY+MPILENLLE F+ SYP LKFP
Sbjct: 902  ACRDADLRFAGVHDSFWTHARDADLMNRILREKFVELYNMPILENLLEDFQTSYPTLKFP 961

Query: 790  PLPERGDFDLHEVLESPYFFN 728
             LPERG+FDL EVL SPYFFN
Sbjct: 962  SLPERGNFDLQEVLRSPYFFN 982


>gb|KDO62285.1| hypothetical protein CISIN_1g001795mg [Citrus sinensis]
          Length = 1012

 Score = 1465 bits (3792), Expect = 0.0
 Identities = 709/939 (75%), Positives = 818/939 (87%), Gaps = 27/939 (2%)
 Frame = -1

Query: 3463 PLSDSIQDNLVENLENSVNFQIPINEIGR---------------VMPQESPS-------- 3353
            PL DSIQ N +EN+ENSV+F IP  E  +               V+P+   S        
Sbjct: 77   PLQDSIQSNFMENIENSVDFHIPTCEQEQNFHQRVENTETCADLVIPRSENSTNHQLMCL 136

Query: 3352 ----RIFIQDPPWIASLFLKGIYKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERT 3185
                RIF+QDPPW +S+FLKG+YKR + +   E++E+++RK+NLLRRRQ+K ETEAWER 
Sbjct: 137  EPRRRIFVQDPPWFSSIFLKGLYKRIKLQ---EYREMKKRKFNLLRRRQVKQETEAWERM 193

Query: 3184 VXXXXXXXXXXXXXKLAPNLPHVKLLFLGWFEPLREAIEKEQRVQQTKKQKAAFAPHIDL 3005
            V             +LAPNLPH+K LFLGWF PL EAIE+EQ++Q+TKKQKAA+APHI+L
Sbjct: 194  VDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIEL 253

Query: 3004 LPAEKMALIVMHKMMGLVMVGNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKK 2825
            LPA+K+A+IVMHKMMGLVM G+ D CVQVVQAAV IGMAIEQE+RIHSFLEKTKNY+RKK
Sbjct: 254  LPADKVAVIVMHKMMGLVMAGHEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKK 313

Query: 2824 TLAENDEGLSKEKEMLRKRINGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELL 2645
             +A+ +E LSKEKE+LRKR+N L++ KR+ E QKLL+ EE KPWGRDTQAKLGSRL+ELL
Sbjct: 314  IIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEETKPWGRDTQAKLGSRLVELL 373

Query: 2644 TETAYIQPPLDQSADSPPDVRPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTA 2465
             ETAY+Q P++ +  SPPDVRPAFRHRFK I+K+PG K  K YGV+ECDPL+L GLD +A
Sbjct: 374  IETAYVQHPVNPADYSPPDVRPAFRHRFKTILKHPGQKTTKRYGVVECDPLVLEGLDRSA 433

Query: 2464 KHMLIPYVPMLVPPRKWKGYDRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEAL 2285
            KHMLIPYVPMLVPP+KWKGY++GG+LFLPSYVMRTHGSRKQQ A+ +V G  M+KV+EAL
Sbjct: 434  KHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEAL 493

Query: 2284 DMLGNTKWRVNRRVLNVVESIWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRK 2105
            D LG+TKWRVN++VL+V+ESIW  GGNIAGLVDR DV +PEKP SED+TE+QKW+WS+RK
Sbjct: 494  DTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRK 553

Query: 2104 AKKLNQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG 1925
            AKK+NQERHSQRCDTELKLSVAR+MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD+CRG
Sbjct: 554  AKKINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRG 613

Query: 1924 ILEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGN 1745
            +LEFAEGRPLGKSGL WLKIHLANL++GGVEKLS+DGRLAFV+NH+ EIFDSA NP+NG+
Sbjct: 614  VLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGS 673

Query: 1744 RWWLTAEDPFQCLAACMSLSEALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAA 1565
            RWWLTAEDPFQCLAAC++LSEAL SSSP +VISHLPIHQDGSCNGLQHYAALGR+++EAA
Sbjct: 674  RWWLTAEDPFQCLAACINLSEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTVEAA 733

Query: 1564 AVNLVAGDKPADVYSEIARRVHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMT 1385
            AVNLVAG+KPADVYSEIA RVH+IM RDSNKDP  +P ALLAK+LI+QVDRKLVKQTVMT
Sbjct: 734  AVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDPSKHPQALLAKILIDQVDRKLVKQTVMT 793

Query: 1384 SVYGVTYVGAREQIKRRLEEKGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLG 1205
            SVYGVT+VGAREQIKRRLEEKG ITDDR LF+A+CYAAKVTL ALGEIFEAAR+IM WLG
Sbjct: 794  SVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLG 853

Query: 1204 DCAKVIASENRPVRWITPLGLPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAF 1025
            DCAKVIASEN+PVRW TPLGLPVVQPYCK ERHLIRT+LQVLALQREG+ V++R+QRTAF
Sbjct: 854  DCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGNLVEIRKQRTAF 913

Query: 1024 PPNFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPI 845
            PPNFVHSLDGSHMMMTA+ACRDAGL FAGVHDSFWTHACDVD+MNQILR+KFVELY+MP+
Sbjct: 914  PPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPM 973

Query: 844  LENLLEGFEASYPALKFPPLPERGDFDLHEVLESPYFFN 728
            LENLLE F+ SYP L FPPLPERG+FDL EVLESPYFFN
Sbjct: 974  LENLLESFQTSYPTLSFPPLPERGNFDLEEVLESPYFFN 1012


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score = 1462 bits (3785), Expect = 0.0
 Identities = 710/916 (77%), Positives = 810/916 (88%), Gaps = 3/916 (0%)
 Frame = -1

Query: 3466 HPLSDSIQDNLVENLENSVNFQIPINEIGRVMPQESPSRIFIQDPPWIASLFLKGIY--- 3296
            H L  S  +N +E L++S N Q+          +ES  RIF+QDPPWI+S          
Sbjct: 75   HALPLSPTNNSIETLQDSSNIQV----------KESIPRIFVQDPPWISSFLFHDWCERN 124

Query: 3295 KRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERTVXXXXXXXXXXXXXKLAPNLPHV 3116
            +RT Q +KLEF+E ERR Y LLRRRQ+KAETEAWER V             KLAPNLP+V
Sbjct: 125  RRTGQNVKLEFRETERRNYGLLRRRQVKAETEAWERMVEEYREIEREMCEKKLAPNLPYV 184

Query: 3115 KLLFLGWFEPLREAIEKEQRVQQTKKQKAAFAPHIDLLPAEKMALIVMHKMMGLVMVGNH 2936
            K LFLGWFEPLREAI+KEQR Q+TKKQKAA+APHI+LLPA+KMA+IVMHKMMGLVM+G+ 
Sbjct: 185  KALFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVMMGHE 244

Query: 2935 DGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKKTLAENDEGLSKEKEMLRKRINGL 2756
            +GCV+VVQAAVQIGMAIEQEVRIHSFLEKTKN++R KT+  + EGL +EKE+LRKR+   
Sbjct: 245  EGCVRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQEGL-REKEILRKRVKSF 303

Query: 2755 VRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELLTETAYIQPPLDQSADSPPDVRPA 2576
            +R+K++ EVQKL++ EE  PWGRDTQAKLGSRLIELLTETAY+Q P++QSAD PPDVRPA
Sbjct: 304  IRKKKIIEVQKLVKNEEITPWGRDTQAKLGSRLIELLTETAYVQTPVNQSADCPPDVRPA 363

Query: 2575 FRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTAKHMLIPYVPMLVPPRKWKGYDRG 2396
            FRH FK + K  G K  + YGVIECDPL+L GLD TAKHM+IPYVPML+PP+KWKGYD+G
Sbjct: 364  FRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKKWKGYDKG 423

Query: 2395 GHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEALDMLGNTKWRVNRRVLNVVESIWA 2216
            G+LFLPSYVMRTHGSRKQQ+A+ +VP +Q+QKV+EALD LGNTKWR+NRRVL+VVESIWA
Sbjct: 424  GYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLSVVESIWA 483

Query: 2215 RGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRKAKKLNQERHSQRCDTELKLSVAR 2036
            RGGN+ GLVDRE+VPLPEKP++EDLTEIQ W+W+ RKAKK+NQERHS RCDTE+KLSVAR
Sbjct: 484  RGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTEIKLSVAR 543

Query: 2035 KMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLKIHLA 1856
            KMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSGL WLKI LA
Sbjct: 544  KMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLA 603

Query: 1855 NLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGNRWWLTAEDPFQCLAACMSLSEAL 1676
            NLYAGGVEKLSYDGRLAFVDNH++++FDSA+NP+NGNRWWLTAEDPFQCLAAC++LSEAL
Sbjct: 604  NLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEAL 663

Query: 1675 NSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGDKPADVYSEIARRVHD 1496
             SSSP TVISHLPIHQDGSCNGLQHYAALGR+SLEA+AVNLVAG+KPADVYSEIA RVH+
Sbjct: 664  RSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHE 723

Query: 1495 IMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGV 1316
            IM RDSNKDP ++P ALLAKVLI QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL EKG+
Sbjct: 724  IMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLAEKGL 783

Query: 1315 ITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLGDCAKVIASENRPVRWITPLGLPV 1136
            ITD+R+LF+A+CYAAKVTLAALGEIF+AAR IM+WLG+CAKVIASEN+PV+W TPLGLPV
Sbjct: 784  ITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPVQWTTPLGLPV 843

Query: 1135 VQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAFPPNFVHSLDGSHMMMTALACRDA 956
            +QPYCK+ERHLIRT+LQVLALQREG  V +R+QRTAFPPNFVHSLDGSHMMMTA+ACRDA
Sbjct: 844  IQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHMMMTAVACRDA 903

Query: 955  GLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPILENLLEGFEASYPALKFPPLPER 776
            GL FAGVHDSFWTHACDVD+MNQILREKFVELYSMPILENLLE F+ S+P L FPPLP+R
Sbjct: 904  GLCFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDR 963

Query: 775  GDFDLHEVLESPYFFN 728
            G+FDL EVLESPYFFN
Sbjct: 964  GNFDLREVLESPYFFN 979


>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
            gi|557556792|gb|ESR66806.1| hypothetical protein
            CICLE_v10007333mg [Citrus clementina]
          Length = 1012

 Score = 1460 bits (3779), Expect = 0.0
 Identities = 708/939 (75%), Positives = 816/939 (86%), Gaps = 27/939 (2%)
 Frame = -1

Query: 3463 PLSDSIQDNLVENLENSVNFQIPINEIGR---------------VMPQESPS-------- 3353
            PL DSIQ N +EN+ENSV+F IP  E  +               V+P+   S        
Sbjct: 77   PLQDSIQSNFMENIENSVDFHIPTCEQEQNFHQRVENIETCADPVIPRSENSTNHQLMCL 136

Query: 3352 ----RIFIQDPPWIASLFLKGIYKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERT 3185
                RIF+QDPPW +S+FLKG+YKR + +   E++E+++RK+NLLRRRQ+K ETEAWER 
Sbjct: 137  EPRRRIFVQDPPWFSSIFLKGLYKRIKLQ---EYREMKKRKFNLLRRRQVKQETEAWERM 193

Query: 3184 VXXXXXXXXXXXXXKLAPNLPHVKLLFLGWFEPLREAIEKEQRVQQTKKQKAAFAPHIDL 3005
            V             +LAPNLPH+K LFLGWF PL EAIE+EQ++Q+TKKQKAA+APHI+L
Sbjct: 194  VDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIEL 253

Query: 3004 LPAEKMALIVMHKMMGLVMVGNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKK 2825
            LPA+KMA+IVMHKMMGLVM G+ D CVQVVQAAV IGMAIEQE+RIHSFLEKTKNY+RKK
Sbjct: 254  LPADKMAVIVMHKMMGLVMAGHEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKK 313

Query: 2824 TLAENDEGLSKEKEMLRKRINGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELL 2645
             +A+ +E LSKEKE+LRKR+N L++ KR+ E QKLL+ EE KPWGRDTQAKLGSRL+ELL
Sbjct: 314  IIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEETKPWGRDTQAKLGSRLVELL 373

Query: 2644 TETAYIQPPLDQSADSPPDVRPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTA 2465
             ETAY+Q P++ +  SPPDVRPAFRHRFK I+K+PG K  K YGV+ECDPL+L GLD +A
Sbjct: 374  IETAYVQHPVNPADYSPPDVRPAFRHRFKTILKHPGQKTTKRYGVVECDPLVLEGLDRSA 433

Query: 2464 KHMLIPYVPMLVPPRKWKGYDRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEAL 2285
            KHMLIPYVPMLVPP+KWKGY++GG+LFLPSYVMRTHGSRKQQ A+ +V G  M+KV+EAL
Sbjct: 434  KHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEAL 493

Query: 2284 DMLGNTKWRVNRRVLNVVESIWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRK 2105
            D LG+TKWRVN++VL+V+ESIW  GGNIAGLVDR DV +PEKP SED+TE+QKW+WS+RK
Sbjct: 494  DTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRK 553

Query: 2104 AKKLNQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG 1925
            AKK+NQERHSQRCDTELKLSVAR+MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD+CRG
Sbjct: 554  AKKINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRG 613

Query: 1924 ILEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGN 1745
            +LEFAEGRPLGKSGL WLKIHLANL++GGVEKLS+DGRLAFV+NH+ EIFDSA NP+NG+
Sbjct: 614  VLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGS 673

Query: 1744 RWWLTAEDPFQCLAACMSLSEALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAA 1565
            RWWLTAEDPFQCLAAC++L+EAL SSSP +VISHLPIHQDGSCNGLQHYAALGR++LEAA
Sbjct: 674  RWWLTAEDPFQCLAACINLAEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAA 733

Query: 1564 AVNLVAGDKPADVYSEIARRVHDIMIRDSNKDPDSNPNALLAKVLINQVDRKLVKQTVMT 1385
            AVNLVAG+KPADVYSEIA RVH+IM RDSNKD   +P ALLAK+LI+QVDRKLVKQTVMT
Sbjct: 734  AVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDHSKHPQALLAKILIDQVDRKLVKQTVMT 793

Query: 1384 SVYGVTYVGAREQIKRRLEEKGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLG 1205
            SVYGVT+VGAREQIKRRLEEKG ITDDR LF+A+CYAAKVTL ALGEIFEAAR+IM WLG
Sbjct: 794  SVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLG 853

Query: 1204 DCAKVIASENRPVRWITPLGLPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAF 1025
            DCAKVIASEN+PVRW TPLGLPVVQPYCK ERHLIRT+LQVLALQREG+ V++R+QRTAF
Sbjct: 854  DCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGNLVEIRKQRTAF 913

Query: 1024 PPNFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPI 845
            PPNFVHSLDGSHMMMTA+ACRDAGL FAGVHDSFWTHACDVD+MNQILR+KFVELY+MP+
Sbjct: 914  PPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPM 973

Query: 844  LENLLEGFEASYPALKFPPLPERGDFDLHEVLESPYFFN 728
            LENLLE F+ SYP L FP LPERG+FDL EVLESPYFFN
Sbjct: 974  LENLLESFQTSYPTLSFPSLPERGNFDLEEVLESPYFFN 1012


>ref|XP_008394282.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 3,
            chloroplastic [Malus domestica]
          Length = 982

 Score = 1459 bits (3778), Expect = 0.0
 Identities = 735/988 (74%), Positives = 819/988 (82%), Gaps = 9/988 (0%)
 Frame = -1

Query: 3664 MTSAASFYPSPPQAQISNSTWRKNNPPK-ANXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 3488
            M S ASF PSP QAQ  +STW K  P K ++                             
Sbjct: 1    MASTASFSPSP-QAQTYSSTWPK--PSKLSHKFLFSSASNLLFFKPSLSSSTPFPLSLKP 57

Query: 3487 XSDPIHFHPLSDSIQDNLVENLENSVNFQIPINEIGRVMPQESPSRIFIQDPPWIASLFL 3308
             SD +H H + DS+QDN VEN   S+N Q+PI E   + PQ+SP RIFIQDPPWIA+LFL
Sbjct: 58   PSDLVHTHLVRDSVQDNFVEN---SMNLQLPIREFHLITPQDSPPRIFIQDPPWIAALFL 114

Query: 3307 KGIYKRTQQELKLEFKEIERRKYNLLRRRQIKAETEAWERTVXXXXXXXXXXXXXKLAPN 3128
            KG+YK   QELKLE KEI R K NLLRR QIKAETEAWER V             KLAP+
Sbjct: 115  KGMYKXANQELKLESKEIXRGKXNLLRRWQIKAETEAWERMVEEYKDLERVMREKKLAPS 174

Query: 3127 LPHVKLLFLGWFEPLREAIEKEQRVQQTKKQKAAFAPHIDLLPAEKMALIVMHKMMGLVM 2948
            LP+VK LFLGWFEPLREAI +EQ+VQQTKK KAAFAPHIDLLP +KMALIVM+ +MGLVM
Sbjct: 175  LPYVKALFLGWFEPLREAIAREQKVQQTKKHKAAFAPHIDLLPPDKMALIVMYNIMGLVM 234

Query: 2947 VGNHDGCVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYQRKKTLAENDEGLSKEKEMLRKR 2768
            VGN DGCVQVVQAAV IGMAIEQEVRIHS LEKTKN+ RKKT+  +++ LSKEKE+LRK 
Sbjct: 235  VGNQDGCVQVVQAAVHIGMAIEQEVRIHSLLEKTKNFXRKKTVVVDEDSLSKEKEILRKH 294

Query: 2767 INGLVRRKRLSEVQKLLRKEEFKPWGRDTQAKLGSRLIELLTETAYIQPPLDQSADSPPD 2588
            +N L++RKRL EVQ LL KEE KPWGRDTQ KLGS LIELLTET Y+QPPL+Q AD PPD
Sbjct: 295  VNVLIKRKRLREVQNLLVKEEIKPWGRDTQPKLGSCLIELLTETTYVQPPLNQLADGPPD 354

Query: 2587 VRPAFRHRFKPIMKNPGLKLVKNYGVIECDPLLLTGLDGTAKHMLIPYVPMLVPPRKWKG 2408
            VRPAFRHRFK   K+PG KLVKNY V+ECD L+LTGLD TAKHMLIPYVPMLVPPRKWKG
Sbjct: 355  VRPAFRHRFKAAAKSPGQKLVKNYVVMECDSLVLTGLDKTAKHMLIPYVPMLVPPRKWKG 414

Query: 2407 YDRGGHLFLPSYVMRTHGSRKQQNAIHTVPGKQMQKVYEALDMLGNTKWRVNRRVLNVVE 2228
            YD+GGHLFLPSYVMRTHGSRKQ +A+  + GKQM KV+EALDM G+TKWRVN++VL++ E
Sbjct: 415  YDKGGHLFLPSYVMRTHGSRKQVDAMRNISGKQMMKVFEALDMPGSTKWRVNKKVLSMAE 474

Query: 2227 SIWARGGNIAGLVDREDVPLPEKPTSEDLTEIQKWRWSLRKAKKLNQERHSQRCDTELKL 2048
            SIWA+GGNIAGLVDREDVP+P+KP    LTE+ KW+WS+RKAKK+NQERHSQRCDTELKL
Sbjct: 475  SIWAKGGNIAGLVDREDVPVPDKPPLXGLTEVPKWKWSVRKAKKINQERHSQRCDTELKL 534

Query: 2047 SVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLHWLK 1868
            SVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKSG  WLK
Sbjct: 535  SVARKIKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGFCWLK 594

Query: 1867 IHLANLYAGGVEKLSYDGRLAFVDNHINEIFDSANNPVNGNRWWLTAEDPFQCLAACMSL 1688
            IHLANL+AGGVEKLSY+   AFVD+HI++IFDSA NPVNGNRWWLTAEDP QCLA+C++L
Sbjct: 595  IHLANLHAGGVEKLSYEDCKAFVDHHIDDIFDSAANPVNGNRWWLTAEDPLQCLASCINL 654

Query: 1687 SEALNSSSPLTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGDKPADVYSEIAR 1508
            SEALNS SP TVISHLPIH DGSCNGLQH+AALGRDSLEAAAVNL AG+KPA+VYSEIA 
Sbjct: 655  SEALNSPSPHTVISHLPIHLDGSCNGLQHHAALGRDSLEAAAVNLGAGEKPANVYSEIAV 714

Query: 1507 RVHDIMIRDSNKDPDSNPNALLAKVLINQVD--------RKLVKQTVMTSVYGVTYVGAR 1352
            RVH+IM RDSNK P ++PNALLA+VL+NQVD         +LVKQTVMTSVYGVTYVGAR
Sbjct: 715  RVHEIMKRDSNKXPTTSPNALLAQVLVNQVDLPCFFSNXSELVKQTVMTSVYGVTYVGAR 774

Query: 1351 EQIKRRLEEKGVITDDRVLFSASCYAAKVTLAALGEIFEAARAIMSWLGDCAKVIASENR 1172
            +QIKRRLEEK + TDDR+LF+ +CYAAKVTLAALGE F+AAR IM+WL DCAKVIASEN+
Sbjct: 775  KQIKRRLEEKCLXTDDRLLFTVACYAAKVTLAALGETFQAARGIMAWLXDCAKVIASENQ 834

Query: 1171 PVRWITPLGLPVVQPYCKTERHLIRTTLQVLALQREGDSVDVRRQRTAFPPNFVHSLDGS 992
            PVRW TPLGLPVVQPYCK ERHLIRT+LQVLALQRE +S+D R+QRTA PP FVHSLDGS
Sbjct: 835  PVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQRESNSIDGRKQRTACPPKFVHSLDGS 894

Query: 991  HMMMTALACRDAGLRFAGVHDSFWTHACDVDQMNQILREKFVELYSMPILENLLEGFEAS 812
            HMMMTALACRDAGL F GVHDSFWTH CDV QMN+ILR+  VELYSMPILENLLE  + S
Sbjct: 895  HMMMTALACRDAGLCFXGVHDSFWTHXCDVXQMNEILRKXIVELYSMPILENLLESXQVS 954

Query: 811  YPALKFPPLPERGDFDLHEVLESPYFFN 728
            YPAL FPP PERGDFDL EVLESPY FN
Sbjct: 955  YPALTFPPXPERGDFDLQEVLESPYXFN 982