BLASTX nr result
ID: Zingiber25_contig00044912
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00044912
(401 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004301443.1| PREDICTED: putative pentatricopeptide repeat... 78 1e-12
ref|XP_004231461.1| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
gb|ESW34235.1| hypothetical protein PHAVU_001G135800g [Phaseolus... 72 6e-11
ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containi... 72 8e-11
ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat... 72 8e-11
ref|XP_004292558.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
ref|XP_006580059.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group] g... 70 2e-10
ref|XP_006659356.1| PREDICTED: putative pentatricopeptide repeat... 70 2e-10
ref|XP_004237759.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-10
gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japo... 70 2e-10
ref|XP_006472911.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
ref|XP_006434361.1| hypothetical protein CICLE_v10003713mg, part... 70 3e-10
ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group] g... 70 4e-10
ref|XP_004973326.1| PREDICTED: putative pentatricopeptide repeat... 70 4e-10
gb|EOY16597.1| Pentatricopeptide repeat superfamily protein [The... 70 4e-10
gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiol... 70 4e-10
gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiol... 70 4e-10
gb|AEP33738.1| chlororespiratory reduction 21, partial [Matthiol... 70 4e-10
gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium offici... 70 4e-10
>ref|XP_004301443.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Fragaria vesca subsp. vesca]
Length = 590
Score = 78.2 bits (191), Expect = 1e-12
Identities = 32/60 (53%), Positives = 45/60 (75%)
Frame = -1
Query: 185 SIHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
SIH A+ G H V VA+S++D Y+KCG +S++R +FD MPHRN +SW+ +I+GYT AG
Sbjct: 139 SIHCLALKTGYHVDVFVASSVVDMYAKCGQISNARNMFDEMPHRNVVSWSGMISGYTQAG 198
>ref|XP_004231461.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Solanum lycopersicum]
Length = 752
Score = 72.8 bits (177), Expect = 4e-11
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = -1
Query: 179 HAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAGM 3
H A+ GL +VVV T+ILD YSKCG + SSRKVFD +P++N ++W+AIIA Y G+
Sbjct: 470 HGIAIRGGLESNVVVGTAILDMYSKCGSIGSSRKVFDRIPYKNVVTWSAIIAAYGMIGL 528
Score = 60.1 bits (144), Expect = 3e-07
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = -1
Query: 185 SIHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAG 21
SIH + G+ Y + V S++D YSKC D+ SS +VF +P +N +SWN++++G
Sbjct: 266 SIHGFVISRGMGYDLFVHNSLIDLYSKCNDIDSSLRVFGGIPEKNVVSWNSLLSG 320
>gb|ESW34235.1| hypothetical protein PHAVU_001G135800g [Phaseolus vulgaris]
Length = 583
Score = 72.4 bits (176), Expect = 6e-11
Identities = 28/61 (45%), Positives = 45/61 (73%)
Frame = -1
Query: 185 SIHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
S+HA A+ H+ V V +S++D Y+KCG+++ +RKVFD MPH+N +SW+ +I GY+ G
Sbjct: 130 SLHALALKTANHFDVFVGSSLVDMYAKCGEINLARKVFDEMPHKNVVSWSGLIYGYSQLG 189
Query: 5 M 3
+
Sbjct: 190 L 190
>ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
[Vitis vinifera]
Length = 575
Score = 72.0 bits (175), Expect = 8e-11
Identities = 29/60 (48%), Positives = 45/60 (75%)
Frame = -1
Query: 185 SIHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
++HA ++ NG+ + V++ TS++ Y+KCG++ SRKVFD MP RNA++WNA+I GY G
Sbjct: 115 ALHAESIKNGVDFDVMIGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNG 174
>ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 72.0 bits (175), Expect = 8e-11
Identities = 28/61 (45%), Positives = 45/61 (73%)
Frame = -1
Query: 185 SIHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
S+HA ++ H+ V V +S++D Y+KCGD++ +RKVFD MPH+N +SW+ +I GY+ G
Sbjct: 129 SLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMG 188
Query: 5 M 3
+
Sbjct: 189 L 189
>ref|XP_004292558.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g21470-like [Fragaria vesca subsp. vesca]
Length = 603
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = -1
Query: 185 SIHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
S HA + +G+ V V TS++D Y+KCGD+ SRKVFD MP RN +SWNA+I GY G
Sbjct: 145 SAHAECIKSGVICDVSVGTSLVDMYAKCGDIIESRKVFDYMPERNVVSWNAMIGGYWRNG 204
>ref|XP_006580059.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 742
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/60 (51%), Positives = 44/60 (73%)
Frame = -1
Query: 182 IHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAGM 3
+HA VV G H VV TS+L+ Y+K G+ SS KVF++MP RN +SWNA+I+G+T+ G+
Sbjct: 182 VHAHVVVTGFFMHTVVGTSLLNMYAKLGENESSVKVFNSMPERNIVSWNAMISGFTSNGL 241
>ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza
sativa Japonica Group] gi|215737111|dbj|BAG96040.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = -1
Query: 179 HAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
HA A+ +GL V VAT+ILDAY KCGD+ ++R VFD MP +N++SWNA+I GY G
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG 241
Score = 57.4 bits (137), Expect = 2e-06
Identities = 22/61 (36%), Positives = 39/61 (63%)
Frame = -1
Query: 185 SIHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
++HA G+ + AT++ + Y+KC + +R+VFD MP R+ ++WNA++AGY G
Sbjct: 80 AVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNG 139
Query: 5 M 3
+
Sbjct: 140 L 140
>ref|XP_006659356.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Oryza brachyantha]
Length = 699
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/59 (50%), Positives = 44/59 (74%)
Frame = -1
Query: 182 IHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
+ + A+ +GL +V A+++LD Y+KCG L +R+VFD MP RNA+SWNA+IAGY +G
Sbjct: 116 LQSLALKSGLVNNVFAASALLDVYAKCGRLRDARRVFDGMPERNAVSWNALIAGYAESG 174
>ref|XP_004237759.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g21470-like [Solanum lycopersicum]
Length = 528
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/60 (50%), Positives = 44/60 (73%)
Frame = -1
Query: 185 SIHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
++HA +V +G +V+V T++LD Y KCG++ S+RKVFD MP RN I+WNA+I G +G
Sbjct: 61 ALHAESVKSGFDCNVMVGTALLDMYGKCGEIRSARKVFDYMPERNVITWNAMIGGCIKSG 120
Score = 55.8 bits (133), Expect = 6e-06
Identities = 22/59 (37%), Positives = 38/59 (64%)
Frame = -1
Query: 182 IHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
IH + G+ + V ++D Y+KCGDLS++R +F+ M +N +WN++I+G+ N G
Sbjct: 289 IHEMIIQKGIELNQYVLNGLVDMYAKCGDLSNARLIFEGMLLKNDAAWNSLISGFANHG 347
>gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = -1
Query: 179 HAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
HA A+ +GL V VAT+ILDAY KCGD+ ++R VFD MP +N++SWNA+I GY G
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG 241
Score = 57.4 bits (137), Expect = 2e-06
Identities = 22/61 (36%), Positives = 39/61 (63%)
Frame = -1
Query: 185 SIHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
++HA G+ + AT++ + Y+KC + +R+VFD MP R+ ++WNA++AGY G
Sbjct: 80 AVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNG 139
Query: 5 M 3
+
Sbjct: 140 L 140
>ref|XP_006472911.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g21470-like [Citrus sinensis]
Length = 562
Score = 70.1 bits (170), Expect = 3e-10
Identities = 29/60 (48%), Positives = 43/60 (71%)
Frame = -1
Query: 185 SIHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
++HA AV +G V++ TS+++ Y+KCGD+ +SR VFD MP RN ++WNA+I GY G
Sbjct: 94 ALHAEAVKSGADTEVMIGTSLVNMYAKCGDILASRNVFDEMPDRNVVTWNAMIGGYLKHG 153
Score = 55.1 bits (131), Expect = 1e-05
Identities = 21/59 (35%), Positives = 38/59 (64%)
Frame = -1
Query: 182 IHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
IH+ + + V +++D Y+KCGDL+++R +F+ M HRN + WN++I+G+ G
Sbjct: 322 IHSMIDKKMMKLNQFVLNALVDMYAKCGDLANARSIFEEMVHRNVVCWNSLISGFATHG 380
>ref|XP_006434361.1| hypothetical protein CICLE_v10003713mg, partial [Citrus clementina]
gi|557536483|gb|ESR47601.1| hypothetical protein
CICLE_v10003713mg, partial [Citrus clementina]
Length = 502
Score = 70.1 bits (170), Expect = 3e-10
Identities = 29/60 (48%), Positives = 43/60 (71%)
Frame = -1
Query: 185 SIHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
++HA AV +G V++ TS+++ Y+KCGD+ +SR VFD MP RN ++WNA+I GY G
Sbjct: 94 ALHAEAVKSGADTEVMIGTSLVNMYAKCGDILASRNVFDEMPDRNVVTWNAMIGGYLKHG 153
Score = 55.1 bits (131), Expect = 1e-05
Identities = 21/59 (35%), Positives = 38/59 (64%)
Frame = -1
Query: 182 IHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
IH+ + + V +++D Y+KCGDL+++R +F+ M HRN + WN++I+G+ G
Sbjct: 322 IHSMIDKKMIKLNQFVLNALVDMYAKCGDLANARSIFEEMVHRNVVCWNSLISGFATHG 380
>ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding
protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding
protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa
Japonica Group] gi|215715200|dbj|BAG94951.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 696
Score = 69.7 bits (169), Expect = 4e-10
Identities = 29/59 (49%), Positives = 44/59 (74%)
Frame = -1
Query: 182 IHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
+ + A+ +GL +V A+++LD Y+KCG + +R+VFD MP RN +SWNA+IAGYT +G
Sbjct: 115 LQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESG 173
>ref|XP_004973326.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Setaria italica]
Length = 697
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = -1
Query: 182 IHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
+ + AV +GL V+ A+++LD Y+KCG LS +R+VF MP RN ISWNA+IAGY+ +G
Sbjct: 116 LQSFAVKSGLADDVIPASALLDVYAKCGRLSDARRVFGGMPERNTISWNALIAGYSESG 174
>gb|EOY16597.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 578
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = -1
Query: 185 SIHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAG 6
S+HA ++ G+ + + A+S+L+ YSKCG+L SRKVFD MP RN ++WNA+I GY G
Sbjct: 92 SLHAESIKAGVAFDLHTASSLLNMYSKCGNLIDSRKVFDEMPERNVVTWNAMIGGYLKNG 151
>gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
Length = 807
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = -1
Query: 182 IHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAGM 3
+H GLH+ V VA+S+ D Y KCG L +RKVFD +P RNA++WNA++ GY GM
Sbjct: 171 VHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGM 230
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = -1
Query: 179 HAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAGM 3
HA A+VNGL ++ TSIL+ Y K G + + +FD M ++ ++WN +I+GY G+
Sbjct: 273 HAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGL 331
>gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
Length = 794
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = -1
Query: 182 IHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAGM 3
+H GLH+ V VA+S+ D Y KCG L +RKVFD +P RNA++WNA++ GY GM
Sbjct: 159 VHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGM 218
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = -1
Query: 179 HAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAGM 3
HA A+VNGL ++ TSIL+ Y K G + + +FD M ++ ++WN +I+GY G+
Sbjct: 261 HAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGL 319
>gb|AEP33738.1| chlororespiratory reduction 21, partial [Matthiola incana]
Length = 784
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = -1
Query: 182 IHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAGM 3
+H GLH+ V VA+S+ D Y KCG L +RKVFD +P RNA++WNA++ GY GM
Sbjct: 172 VHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGM 231
>gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium officinale]
Length = 826
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = -1
Query: 182 IHAAAVVNGLHYHVVVATSILDAYSKCGDLSSSRKVFDAMPHRNAISWNAIIAGYTNAGM 3
+H V +GLH V VA+S+ D Y KCG L +RKVFD +P RN ++WNA++ GY GM
Sbjct: 193 VHGYVVKSGLHDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGM 252