BLASTX nr result

ID: Zingiber25_contig00039290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00039290
         (408 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001142468.1| uncharacterized protein LOC100274676 [Zea ma...   102   5e-20
ref|XP_004972576.1| PREDICTED: VIN3-like protein 2-like isoform ...   101   9e-20
ref|XP_002444029.1| hypothetical protein SORBIDRAFT_07g006110 [S...   101   9e-20
gb|ACN25510.1| unknown [Zea mays] gi|413917073|gb|AFW57005.1| hy...   100   3e-19
gb|AFW60990.1| hypothetical protein ZEAMMB73_651877 [Zea mays]         99   8e-19
ref|XP_003573553.1| PREDICTED: protein VERNALIZATION INSENSITIVE...    95   9e-18
ref|NP_001061268.1| Os08g0220600 [Oryza sativa Japonica Group] g...    83   3e-14
gb|EEC83114.1| hypothetical protein OsI_28271 [Oryza sativa Indi...    83   3e-14
ref|XP_006659215.1| PREDICTED: VIN3-like protein 2-like isoform ...    82   7e-14
ref|XP_002283776.1| PREDICTED: protein VERNALIZATION INSENSITIVE...    62   1e-07

>ref|NP_001142468.1| uncharacterized protein LOC100274676 [Zea mays]
           gi|195604734|gb|ACG24197.1| hypothetical protein [Zea
           mays]
          Length = 635

 Score =  102 bits (254), Expect = 5e-20
 Identities = 66/149 (44%), Positives = 86/149 (57%), Gaps = 18/149 (12%)
 Frame = -2

Query: 395 KWEAKCVTQGLIGNSGQCSTRNSGSAYIGEEFILFSKKERDMVELPMIIRSDSQKGSTNN 216
           +WEAKC T+ L   S QCST+NS S  + E+ +   KK+ ++      I+ DS KGSTN+
Sbjct: 418 EWEAKCSTRSLDHGSSQCSTQNSESMCLKEDPMKHQKKDLNVQNHQRTIQYDSPKGSTNS 477

Query: 215 SDNN-----HANHHKVLPSEDASDNNERHL-----TLP---SSLGPCEANAN-----DTP 90
           S+NN     ++   KV   + ASDN+E  L      LP   S+  P EA +       TP
Sbjct: 478 SENNLLCDRYSKRAKVARLDGASDNDESQLPPTSEVLPFASSNYSPSEAPSKPDLLIGTP 537

Query: 89  DSDSKKESAERQYEYCVKVIRWLECEGHM 3
           DS S K   E+QYEYCVKV+RWLE EGHM
Sbjct: 538 DSAS-KNYVEQQYEYCVKVVRWLEHEGHM 565


>ref|XP_004972576.1| PREDICTED: VIN3-like protein 2-like isoform X1 [Setaria italica]
           gi|514792463|ref|XP_004972577.1| PREDICTED: VIN3-like
           protein 2-like isoform X2 [Setaria italica]
           gi|514792467|ref|XP_004972578.1| PREDICTED: VIN3-like
           protein 2-like isoform X3 [Setaria italica]
           gi|514792471|ref|XP_004972579.1| PREDICTED: VIN3-like
           protein 2-like isoform X4 [Setaria italica]
           gi|514792475|ref|XP_004972580.1| PREDICTED: VIN3-like
           protein 2-like isoform X5 [Setaria italica]
          Length = 632

 Score =  101 bits (252), Expect = 9e-20
 Identities = 65/147 (44%), Positives = 84/147 (57%), Gaps = 18/147 (12%)
 Frame = -2

Query: 389 EAKCVTQGLIGNSGQCSTRNSGSAYIGEEFILFSKKERDMVELPMIIRSDSQKGSTNNSD 210
           EAKC T+ L   S QCST+NS S  + E+ +   KK+ ++      I+ DS KGSTN+S+
Sbjct: 417 EAKCTTRSLDQGSSQCSTQNSESVCLKEDSVQHQKKDLNLQNHQRAIQHDSPKGSTNSSE 476

Query: 209 NN-----HANHHKVLPSEDASDNNERHL-----TLP---SSLGPCEANAN-----DTPDS 84
           NN     ++   K+   + ASDN+E  L      LP   S+  P EA +       TPDS
Sbjct: 477 NNLSCDRYSKRAKIARLDGASDNDESQLPPTSEVLPFPSSNSSPSEAPSKPDVLIGTPDS 536

Query: 83  DSKKESAERQYEYCVKVIRWLECEGHM 3
            S K   E+QYEYCVKVIRWLE EGHM
Sbjct: 537 -SSKNYVEQQYEYCVKVIRWLEHEGHM 562


>ref|XP_002444029.1| hypothetical protein SORBIDRAFT_07g006110 [Sorghum bicolor]
           gi|241940379|gb|EES13524.1| hypothetical protein
           SORBIDRAFT_07g006110 [Sorghum bicolor]
          Length = 690

 Score =  101 bits (252), Expect = 9e-20
 Identities = 65/149 (43%), Positives = 86/149 (57%), Gaps = 18/149 (12%)
 Frame = -2

Query: 395 KWEAKCVTQGLIGNSGQCSTRNSGSAYIGEEFILFSKKERDMVELPMIIRSDSQKGSTNN 216
           +WEAKC T+ L   S QCST+NS S  + E+ +   KK+ ++      I+ DS KGSTN+
Sbjct: 473 EWEAKCSTRSLDHGSSQCSTQNSESMCLKEDSMQHQKKDLNVQNHQRTIQYDSPKGSTNS 532

Query: 215 SDNN-----HANHHKVLPSEDASDNNERHL-----TLP---SSLGPCEANAN-----DTP 90
           S+NN     ++   KV   + ASDN+E  L      LP   S+  P EA +       TP
Sbjct: 533 SENNLSCERYSKRAKVARLDGASDNDENQLPPTSEVLPFASSNSSPSEAPSKPDLLIGTP 592

Query: 89  DSDSKKESAERQYEYCVKVIRWLECEGHM 3
           DS S K   E+QYEYCVKV+RWLE +GHM
Sbjct: 593 DSAS-KNYVEQQYEYCVKVVRWLEHKGHM 620


>gb|ACN25510.1| unknown [Zea mays] gi|413917073|gb|AFW57005.1| hypothetical protein
           ZEAMMB73_127759 [Zea mays]
          Length = 637

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 65/149 (43%), Positives = 85/149 (57%), Gaps = 18/149 (12%)
 Frame = -2

Query: 395 KWEAKCVTQGLIGNSGQCSTRNSGSAYIGEEFILFSKKERDMVELPMIIRSDSQKGSTNN 216
           +WEAKC T+ L   S QCST+NS S  +  + +   KK+ ++      I+ DS KGSTN+
Sbjct: 420 EWEAKCSTRSLDHGSSQCSTQNSESMCLKVDPMQHQKKDLNVQNHQRTIQYDSPKGSTNS 479

Query: 215 SDNN-----HANHHKVLPSEDASDNNERHL-----TLP---SSLGPCEANAN-----DTP 90
           S+NN     ++   KV   + ASDN+E  L      LP   S+  P EA +       TP
Sbjct: 480 SENNLLCDRYSKRAKVARLDGASDNDESQLPPTSEVLPFASSNYSPSEAPSKPDLLIGTP 539

Query: 89  DSDSKKESAERQYEYCVKVIRWLECEGHM 3
           DS S K   E+QYEYCVKV+RWLE EGHM
Sbjct: 540 DSAS-KNYVEQQYEYCVKVVRWLEHEGHM 567


>gb|AFW60990.1| hypothetical protein ZEAMMB73_651877 [Zea mays]
          Length = 647

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 63/149 (42%), Positives = 85/149 (57%), Gaps = 18/149 (12%)
 Frame = -2

Query: 395 KWEAKCVTQGLIGNSGQCSTRNSGSAYIGEEFILFSKKERDMVELPMIIRSDSQKGSTNN 216
           +WE KC T+ L   S QCST+NS S  + ++ +   KK+ ++      I+ DS KGSTN+
Sbjct: 430 EWETKCSTRSLDHGSSQCSTQNSESMCLKDDSMQHHKKDLNVQNHQRTIQYDSPKGSTNS 489

Query: 215 SDNN-----HANHHKVLPSEDASDNNERHL-----TLP---SSLGPCEANAN-----DTP 90
           S+NN     ++   KV   + ASDN+E  L      LP   S+  P EA +       TP
Sbjct: 490 SENNLSCDRYSKRAKVARLDGASDNDESQLPPTSEVLPFASSNSSPSEAPSKPDLLIGTP 549

Query: 89  DSDSKKESAERQYEYCVKVIRWLECEGHM 3
           DS S K   E+QYEYCV+V+RWLE EGHM
Sbjct: 550 DSAS-KNYVEQQYEYCVRVVRWLEHEGHM 577


>ref|XP_003573553.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Brachypodium
           distachyon]
          Length = 631

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 62/150 (41%), Positives = 84/150 (56%), Gaps = 18/150 (12%)
 Frame = -2

Query: 398 GKWEAKCVTQGLIGNSGQCSTRNSGSAYIGEEFILFSKKERDMVELPMIIRSDSQKGSTN 219
           G+ EAKC T+ L   S QCST+NS S  I E+ + + K E ++ +   +I+ DS K STN
Sbjct: 415 GECEAKCSTRSLDRGSSQCSTQNSESLCIKEDVLRYQKNELNLQKQERVIQYDSPKASTN 474

Query: 218 NSDNNHA-----NHHKVLPSEDASDNNERHL-----TLP---SSLGPCEAN-----ANDT 93
           +S+NN +        K+   +  SDN+E  L      LP   S+  P EA       + T
Sbjct: 475 SSENNESPDRYYKRTKIARLDGTSDNDESQLPPTSEVLPLAGSNSSPSEAPNKPDWLSST 534

Query: 92  PDSDSKKESAERQYEYCVKVIRWLECEGHM 3
           PDS + K   E+QYEYCVKVI+WLE  GHM
Sbjct: 535 PDS-ACKNYVEQQYEYCVKVIKWLEHGGHM 563


>ref|NP_001061268.1| Os08g0220600 [Oryza sativa Japonica Group]
           gi|38637254|dbj|BAD03519.1| putative coiled-coil protein
           [Oryza sativa Japonica Group]
           gi|113623237|dbj|BAF23182.1| Os08g0220600 [Oryza sativa
           Japonica Group] gi|215740518|dbj|BAG97174.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222640115|gb|EEE68247.1| hypothetical protein
           OsJ_26450 [Oryza sativa Japonica Group]
          Length = 630

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 57/149 (38%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
 Frame = -2

Query: 398 GKWEAKCVTQGLIGNSGQCSTRNSGSAYIGEEFILFSKKERDMVELPMI-IRSDSQKGST 222
           G+WE KC T+ L   S QCST+NS S  I E+     K E ++       I+ DS   ++
Sbjct: 415 GEWEVKCSTRSLNHGSSQCSTQNSESMSIKEDLEQHQKNELNLKNKQWWGIQYDSPSANS 474

Query: 221 NNSD---NNHANHHKVLPSEDASDNNERHLTLPSSLGPCEAN-------------ANDTP 90
           N +D   + H    K+   + ASDN+E  L   S + P  ++              + TP
Sbjct: 475 NENDVCPDLHPKRAKLAKLDGASDNDESQLLPTSEVLPFMSSNSSLSEVPSKPDWVSSTP 534

Query: 89  DSDSKKESAERQYEYCVKVIRWLECEGHM 3
           DS  K    ERQYEY VKVIRWLE EGHM
Sbjct: 535 DSACKNH-VERQYEYSVKVIRWLEHEGHM 562


>gb|EEC83114.1| hypothetical protein OsI_28271 [Oryza sativa Indica Group]
          Length = 630

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 57/149 (38%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
 Frame = -2

Query: 398 GKWEAKCVTQGLIGNSGQCSTRNSGSAYIGEEFILFSKKERDMVELPMI-IRSDSQKGST 222
           G+WE KC T+ L   S QCST+NS S  I E+     K E ++       I+ DS   ++
Sbjct: 415 GEWEVKCSTRSLNHGSSQCSTQNSESMSIKEDLEQHQKNELNLKNKQWWGIQYDSPSANS 474

Query: 221 NNSD---NNHANHHKVLPSEDASDNNERHLTLPSSLGPCEAN-------------ANDTP 90
           N +D   + H    K+   + ASDN+E  L   S + P  ++              + TP
Sbjct: 475 NENDVCPDLHPKRAKLAKLDGASDNDESQLLPTSEVLPFMSSNSSLSEVPSKPDWVSSTP 534

Query: 89  DSDSKKESAERQYEYCVKVIRWLECEGHM 3
           DS  K    ERQYEY VKVIRWLE EGHM
Sbjct: 535 DSACKNH-VERQYEYSVKVIRWLEHEGHM 562


>ref|XP_006659215.1| PREDICTED: VIN3-like protein 2-like isoform X1 [Oryza brachyantha]
           gi|573953907|ref|XP_006659216.1| PREDICTED: VIN3-like
           protein 2-like isoform X2 [Oryza brachyantha]
           gi|573953909|ref|XP_006659217.1| PREDICTED: VIN3-like
           protein 2-like isoform X3 [Oryza brachyantha]
          Length = 628

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 60/151 (39%), Positives = 75/151 (49%), Gaps = 19/151 (12%)
 Frame = -2

Query: 398 GKWEAKCVTQGLIGNSGQCSTRNSGSAYIGEEFILFSKKERDMVELPM-IIRSDSQKGST 222
           G WE KC T  L   S QCST+NSGS  I  + +   K E ++       I+ DS   ST
Sbjct: 413 GDWEGKCSTLSLDHGSSQCSTQNSGSMCIKVDLMQHQKNELNLKNKQRRAIQYDSP--ST 470

Query: 221 NNSDNN-----HANHHKVLPSEDASDNNERHLTLPSSLGPCEAN-------------AND 96
           N+S+NN     +    K    + ASDN+E  L   S + P  ++              + 
Sbjct: 471 NSSENNVSVDLYPKRAKFARLDGASDNDESQLLPTSEVLPFVSSNSSLSEVPSKPDWLSS 530

Query: 95  TPDSDSKKESAERQYEYCVKVIRWLECEGHM 3
           TPDS  K    ERQYEY VKVIRWLE EGHM
Sbjct: 531 TPDSVCKNH-VERQYEYSVKVIRWLEHEGHM 560


>ref|XP_002283776.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 617

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 50/152 (32%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
 Frame = -2

Query: 401 LGKWEAKCVTQGLIGNSGQCSTRNSGSAYIGEEFILFSKKERDMVELPMIIRSDSQKGST 222
           LG WEAK VT  L        +R+S SA            E    E  ++++  SQ  ST
Sbjct: 415 LGVWEAKWVTPSL--------SRSSVSAL---------DDEHRRGENTLMLQEYSQMDST 457

Query: 221 NNSDNN--HANHHKVLPSEDASDNNERH-------------LTLPSSLGPCEANAND--- 96
           N+SD      +H + L S D  + N+               L +PSS+ P   +  D   
Sbjct: 458 NSSDTKLVSCDHSEKLRSLDDINKNKNSGFHILPPPMEAVPLLIPSSVPPSTPSKTDKMH 517

Query: 95  -TPDSDSKKESAERQYEYCVKVIRWLECEGHM 3
             P   SKK+  E  YEY V+VI+WLEC+GH+
Sbjct: 518 EVPGLGSKKQIRESDYEYSVRVIKWLECQGHI 549


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