BLASTX nr result
ID: Zingiber25_contig00027953
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00027953
(256 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEC78737.1| hypothetical protein OsI_18944 [Oryza sativa Indi... 134 1e-29
ref|XP_006654073.1| PREDICTED: DNA-directed RNA polymerase V sub... 134 2e-29
ref|XP_003568817.1| PREDICTED: DNA-directed RNA polymerase II su... 131 1e-28
ref|XP_004958533.1| PREDICTED: DNA-directed RNA polymerase II su... 130 2e-28
ref|XP_003568883.1| PREDICTED: DNA-directed RNA polymerase II su... 129 3e-28
gb|EMT05702.1| DNA-directed RNA polymerase II subunit RPB7 [Aegi... 129 4e-28
gb|AAS98454.2| putative receptor kinase [Oryza sativa Japonica G... 128 7e-28
ref|XP_002439325.1| hypothetical protein SORBIDRAFT_09g004460 [S... 128 7e-28
gb|EMS58496.1| DNA-directed RNA polymerase II subunit RPB7 [Trit... 128 9e-28
ref|NP_001054703.1| Os05g0157100 [Oryza sativa Japonica Group] g... 128 9e-28
ref|NP_001150375.1| LOC100284005 [Zea mays] gi|194705372|gb|ACF8... 126 3e-27
gb|EEE62799.1| hypothetical protein OsJ_17602 [Oryza sativa Japo... 125 4e-27
dbj|BAK04600.1| predicted protein [Hordeum vulgare subsp. vulgare] 125 6e-27
gb|EMS61603.1| DNA-directed RNA polymerase II subunit RPB7 [Trit... 114 2e-23
ref|XP_002314654.1| predicted protein [Populus trichocarpa] 107 2e-21
gb|ABK95475.1| unknown [Populus trichocarpa] 107 2e-21
gb|EOY19671.1| RNA polymerase Rpb7-like, N-terminal domain isofo... 107 2e-21
ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II su... 106 3e-21
gb|EOY19676.1| RNA polymerase Rpb7-like, N-terminal domain [Theo... 106 4e-21
ref|XP_002312568.1| RNA polymerase Rpb7 N-terminal domain-contai... 105 5e-21
>gb|EEC78737.1| hypothetical protein OsI_18944 [Oryza sativa Indica Group]
Length = 175
Score = 134 bits (337), Expect = 1e-29
Identities = 60/83 (72%), Positives = 75/83 (90%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
VDKILKHG+FLK+GPI SIFLSEKT+ DYKY+GG+NPMF+ND H+ LEKDT +RFKV+G
Sbjct: 94 VDKILKHGVFLKSGPIESIFLSEKTLSDYKYIGGENPMFMND-HSKLEKDTAVRFKVMGF 152
Query: 75 KWLESDREFQVLATLAADFLGSL 7
+W+E+DR+FQ+LATLA D+LG L
Sbjct: 153 RWMEADRQFQILATLAGDYLGPL 175
>ref|XP_006654073.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Oryza
brachyantha]
Length = 175
Score = 134 bits (336), Expect = 2e-29
Identities = 60/83 (72%), Positives = 76/83 (91%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
VDKILKHG+FLK+GPI SIFLSEKTM DYKY+GG+NPMF+ND H+ LEK+T++RFKV+G
Sbjct: 94 VDKILKHGVFLKSGPIESIFLSEKTMSDYKYIGGENPMFMND-HSKLEKETVVRFKVMGF 152
Query: 75 KWLESDREFQVLATLAADFLGSL 7
+W+E+DR+FQ+LATLA D+LG L
Sbjct: 153 RWMEADRQFQLLATLAGDYLGPL 175
>ref|XP_003568817.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like isoform
1 [Brachypodium distachyon]
gi|357134426|ref|XP_003568818.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7-like isoform 2
[Brachypodium distachyon]
Length = 175
Score = 131 bits (329), Expect = 1e-28
Identities = 59/83 (71%), Positives = 74/83 (89%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
VDKILKHG+FLK+GPI +IFLSEKTM DYKY+GG+NPMF+ D H+ LEKDT++RF+V+G
Sbjct: 94 VDKILKHGMFLKSGPIENIFLSEKTMNDYKYIGGENPMFMKD-HSKLEKDTIVRFRVMGF 152
Query: 75 KWLESDREFQVLATLAADFLGSL 7
+W+E DR+FQ+LATLA DFLG L
Sbjct: 153 RWMEGDRQFQLLATLAGDFLGPL 175
>ref|XP_004958533.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Setaria italica]
Length = 175
Score = 130 bits (326), Expect = 2e-28
Identities = 56/83 (67%), Positives = 75/83 (90%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
VD+ILKHG+FLK+GP+ SIF++EK+M DYKY+GG+NPMF+ND H+ LEKDT +RFKV+G
Sbjct: 94 VDRILKHGVFLKSGPVESIFMAEKSMSDYKYIGGENPMFMND-HSKLEKDTAVRFKVMGF 152
Query: 75 KWLESDREFQVLATLAADFLGSL 7
+W+E+DR+FQ+LAT+A DFLG L
Sbjct: 153 RWMEADRQFQLLATIAGDFLGPL 175
>ref|XP_003568883.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Brachypodium distachyon]
Length = 175
Score = 129 bits (325), Expect = 3e-28
Identities = 57/83 (68%), Positives = 74/83 (89%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
V+KILKHG+FLK+GPI ++FLSEKTM DYKY+GG+NPMF+ D H+ LEKDT++RFK +G
Sbjct: 94 VEKILKHGVFLKSGPIENVFLSEKTMNDYKYIGGENPMFMKD-HSKLEKDTVLRFKAMGF 152
Query: 75 KWLESDREFQVLATLAADFLGSL 7
+W+E+DR+FQ+LATLA DFLG L
Sbjct: 153 RWMEADRQFQLLATLAGDFLGPL 175
>gb|EMT05702.1| DNA-directed RNA polymerase II subunit RPB7 [Aegilops tauschii]
Length = 175
Score = 129 bits (324), Expect = 4e-28
Identities = 58/83 (69%), Positives = 75/83 (90%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
V+KILKHG+FLK+GPI SIFLSEK+M DYKY+GG+NPMF+ND H+ LE+DT +RFKV+G
Sbjct: 94 VEKILKHGVFLKSGPIESIFLSEKSMSDYKYMGGENPMFMND-HSKLERDTAVRFKVMGF 152
Query: 75 KWLESDREFQVLATLAADFLGSL 7
+W+E+DR+FQ+LA+LA DFLG L
Sbjct: 153 RWMEADRQFQLLASLAGDFLGPL 175
>gb|AAS98454.2| putative receptor kinase [Oryza sativa Japonica Group]
Length = 715
Score = 128 bits (322), Expect = 7e-28
Identities = 58/79 (73%), Positives = 72/79 (91%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
VDKILKHG+FLK+GPI SIFLSEKT+ DYKY+GG+NPMF+ND H+ LEKDT +RFKV+G
Sbjct: 129 VDKILKHGVFLKSGPIESIFLSEKTLSDYKYIGGENPMFMND-HSKLEKDTAVRFKVMGF 187
Query: 75 KWLESDREFQVLATLAADF 19
+W+E+DR+FQ+LATLAA F
Sbjct: 188 RWMEADRQFQILATLAAMF 206
>ref|XP_002439325.1| hypothetical protein SORBIDRAFT_09g004460 [Sorghum bicolor]
gi|241944610|gb|EES17755.1| hypothetical protein
SORBIDRAFT_09g004460 [Sorghum bicolor]
Length = 175
Score = 128 bits (322), Expect = 7e-28
Identities = 57/83 (68%), Positives = 74/83 (89%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
VD+ILKHG+FLK+GP+ SIFL+EK+M DYKY+GG+N MF+ND H+ LEKDT +RFKVLG
Sbjct: 94 VDRILKHGVFLKSGPVESIFLAEKSMSDYKYIGGENAMFMND-HSKLEKDTAVRFKVLGF 152
Query: 75 KWLESDREFQVLATLAADFLGSL 7
+W+E+DR+FQ+LAT+A DFLG L
Sbjct: 153 RWMEADRQFQLLATIAGDFLGPL 175
>gb|EMS58496.1| DNA-directed RNA polymerase II subunit RPB7 [Triticum urartu]
Length = 175
Score = 128 bits (321), Expect = 9e-28
Identities = 57/83 (68%), Positives = 75/83 (90%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
V+KILKHG+FLK+GPI SIFLSEK+M DYKY+GG+NP+F+ND H+ LE+DT +RFKV+G
Sbjct: 94 VEKILKHGVFLKSGPIESIFLSEKSMSDYKYMGGENPLFMND-HSKLERDTAVRFKVMGF 152
Query: 75 KWLESDREFQVLATLAADFLGSL 7
+W+E+DR+FQ+LA+LA DFLG L
Sbjct: 153 RWMEADRQFQLLASLAGDFLGPL 175
>ref|NP_001054703.1| Os05g0157100 [Oryza sativa Japonica Group]
gi|45267865|gb|AAS55764.1| putative RNA polymerase II
[Oryza sativa Japonica Group]
gi|113578254|dbj|BAF16617.1| Os05g0157100 [Oryza sativa
Japonica Group] gi|125550915|gb|EAY96624.1| hypothetical
protein OsI_18537 [Oryza sativa Indica Group]
gi|215692867|dbj|BAG88287.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222630264|gb|EEE62396.1| hypothetical protein
OsJ_17187 [Oryza sativa Japonica Group]
Length = 175
Score = 128 bits (321), Expect = 9e-28
Identities = 58/83 (69%), Positives = 75/83 (90%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
VDKILKHGIFLK+GPI SIFLSEKTM D+KY+GG+N +F+N+ H+ LEKDT++RFKV+G
Sbjct: 94 VDKILKHGIFLKSGPIESIFLSEKTMSDFKYIGGENAVFMNE-HSKLEKDTVVRFKVMGF 152
Query: 75 KWLESDREFQVLATLAADFLGSL 7
+W+E+DR+FQ+LATLA D+LG L
Sbjct: 153 RWMEADRQFQLLATLAGDYLGPL 175
>ref|NP_001150375.1| LOC100284005 [Zea mays] gi|194705372|gb|ACF86770.1| unknown [Zea
mays] gi|195638760|gb|ACG38848.1| DNA-directed RNA
polymerase II 19 kDa polypeptide [Zea mays]
gi|195658229|gb|ACG48582.1| DNA-directed RNA polymerase
II 19 kDa polypeptide [Zea mays]
gi|413944600|gb|AFW77249.1| DNA-directed RNA polymerase
II polypeptide isoform 1 [Zea mays]
gi|413944601|gb|AFW77250.1| DNA-directed RNA polymerase
II polypeptide isoform 2 [Zea mays]
gi|413944602|gb|AFW77251.1| DNA-directed RNA polymerase
II polypeptide isoform 3 [Zea mays]
Length = 175
Score = 126 bits (317), Expect = 3e-27
Identities = 56/83 (67%), Positives = 74/83 (89%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
VD+ILKHG+FLK+GP+ SIFL+EK+M +YKY+GG+N MF+ND H+ LEKDT +RFKVLG
Sbjct: 94 VDRILKHGVFLKSGPVESIFLAEKSMSNYKYIGGENAMFMND-HSKLEKDTAVRFKVLGF 152
Query: 75 KWLESDREFQVLATLAADFLGSL 7
+W+E+DR+FQ+LAT+A DFLG L
Sbjct: 153 RWMEADRQFQLLATIAGDFLGPL 175
>gb|EEE62799.1| hypothetical protein OsJ_17602 [Oryza sativa Japonica Group]
Length = 796
Score = 125 bits (315), Expect = 4e-27
Identities = 56/76 (73%), Positives = 70/76 (92%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
VDKILKHG+FLK+GPI SIFLSEKT+ DYKY+GG+NPMF+ND H+ LEKDT +RFKV+G
Sbjct: 94 VDKILKHGVFLKSGPIESIFLSEKTLSDYKYIGGENPMFMND-HSKLEKDTAVRFKVMGF 152
Query: 75 KWLESDREFQVLATLA 28
+W+E+DR+FQ+LATLA
Sbjct: 153 RWMEADRQFQILATLA 168
>dbj|BAK04600.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 125 bits (314), Expect = 6e-27
Identities = 56/83 (67%), Positives = 74/83 (89%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
V+KILKHG+FLK+GPI SIFLSEK+M DYKY+GG+NPMF+ D H+ LE+DT +RFKV+G
Sbjct: 94 VEKILKHGVFLKSGPIESIFLSEKSMSDYKYMGGENPMFMKD-HSKLERDTAVRFKVMGF 152
Query: 75 KWLESDREFQVLATLAADFLGSL 7
+W+E++R+FQ+LA+LA DFLG L
Sbjct: 153 RWMEAERQFQLLASLAGDFLGPL 175
>gb|EMS61603.1| DNA-directed RNA polymerase II subunit RPB7 [Triticum urartu]
Length = 173
Score = 114 bits (284), Expect = 2e-23
Identities = 50/83 (60%), Positives = 71/83 (85%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
V+KILKHG+FLK+GP+ +IF+ K+M DYKY+GG+NPMF+ D ++ LEK T++RFKV+G
Sbjct: 92 VEKILKHGVFLKSGPMENIFMPAKSMSDYKYMGGENPMFMKD-YSKLEKHTIVRFKVMGF 150
Query: 75 KWLESDREFQVLATLAADFLGSL 7
W+E+DR+F++LAT+A DFLG L
Sbjct: 151 CWMEADRQFRLLATMAGDFLGPL 173
>ref|XP_002314654.1| predicted protein [Populus trichocarpa]
Length = 193
Score = 107 bits (267), Expect = 2e-21
Identities = 47/81 (58%), Positives = 63/81 (77%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
V K+LKHG+ L+ GPI +I+LS M DY+YV G+NP+FLNDK + +EKD ++RF VLG
Sbjct: 110 VHKVLKHGVLLRCGPIENIYLSSMKMLDYRYVPGENPVFLNDKTSKIEKDVVVRFVVLGT 169
Query: 75 KWLESDREFQVLATLAADFLG 13
KWLE++REFQ L +L D+LG
Sbjct: 170 KWLEAEREFQALVSLEGDYLG 190
>gb|ABK95475.1| unknown [Populus trichocarpa]
Length = 176
Score = 107 bits (267), Expect = 2e-21
Identities = 47/81 (58%), Positives = 63/81 (77%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
V K+LKHG+ L+ GPI +I+LS M DY+YV G+NP+FLNDK + +EKD ++RF VLG
Sbjct: 93 VHKVLKHGVLLRCGPIENIYLSSMKMLDYRYVPGENPVFLNDKTSKIEKDVVVRFVVLGT 152
Query: 75 KWLESDREFQVLATLAADFLG 13
KWLE++REFQ L +L D+LG
Sbjct: 153 KWLEAEREFQALVSLEGDYLG 173
>gb|EOY19671.1| RNA polymerase Rpb7-like, N-terminal domain isoform 1 [Theobroma
cacao] gi|508727775|gb|EOY19672.1| RNA polymerase
Rpb7-like, N-terminal domain isoform 2, partial
[Theobroma cacao]
Length = 176
Score = 107 bits (266), Expect = 2e-21
Identities = 46/81 (56%), Positives = 63/81 (77%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
V KILKHG+FL+ GP+ +I+LS M DY YV G+N +F+NDKH+ +EKD ++RF V+G
Sbjct: 93 VHKILKHGVFLRCGPVQNIYLSHLKMPDYHYVPGENAIFMNDKHSKIEKDVVVRFIVIGT 152
Query: 75 KWLESDREFQVLATLAADFLG 13
KWLE++REFQ L +L D+LG
Sbjct: 153 KWLEAEREFQALVSLEGDYLG 173
>ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Cucumis sativus] gi|449522228|ref|XP_004168129.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB7-like [Cucumis sativus]
Length = 175
Score = 106 bits (265), Expect = 3e-21
Identities = 46/81 (56%), Positives = 64/81 (79%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
V K+LKHG+FL+ GP+ +I+LS M DY+YV G+NP+FLNDK + +EKD ++RF V+G
Sbjct: 92 VHKVLKHGVFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGT 151
Query: 75 KWLESDREFQVLATLAADFLG 13
KWLE++REFQ L +L D+LG
Sbjct: 152 KWLEAEREFQALVSLEGDYLG 172
>gb|EOY19676.1| RNA polymerase Rpb7-like, N-terminal domain [Theobroma cacao]
Length = 176
Score = 106 bits (264), Expect = 4e-21
Identities = 46/81 (56%), Positives = 63/81 (77%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
V KILKHG+FL+ GP+ +I+LS M DY YV G+N +F+NDKH+ +EKD ++RF V+G
Sbjct: 93 VHKILKHGVFLRCGPVQNIYLSHLKMPDYHYVPGENAIFMNDKHSKIEKDVVVRFIVIGT 152
Query: 75 KWLESDREFQVLATLAADFLG 13
KWLE++REFQ L +L D+LG
Sbjct: 153 KWLEAEREFQALFSLEGDYLG 173
>ref|XP_002312568.1| RNA polymerase Rpb7 N-terminal domain-containing family protein
[Populus trichocarpa] gi|222852388|gb|EEE89935.1| RNA
polymerase Rpb7 N-terminal domain-containing family
protein [Populus trichocarpa]
Length = 176
Score = 105 bits (263), Expect = 5e-21
Identities = 47/81 (58%), Positives = 63/81 (77%)
Frame = -2
Query: 255 VDKILKHGIFLKAGPIGSIFLSEKTMRDYKYVGGDNPMFLNDKHANLEKDTMIRFKVLGL 76
V K+LKHG+ L+ GPI +I+LS M DY+YV G+NP+FLNDK + +EKD ++RF VLG
Sbjct: 93 VHKVLKHGVLLRCGPIENIYLSCMKMPDYRYVPGENPVFLNDKTSKIEKDVVVRFVVLGT 152
Query: 75 KWLESDREFQVLATLAADFLG 13
KWLE++REFQ L +L D+LG
Sbjct: 153 KWLEAEREFQALVSLEGDYLG 173