BLASTX nr result

ID: Zingiber25_contig00011961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00011961
         (287 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006376671.1| pre-mRNA splicing factor family protein [Pop...   140   2e-31
ref|XP_002318458.1| predicted protein [Populus trichocarpa]           140   2e-31
ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   138   9e-31
ref|XP_006347508.1| PREDICTED: pre-mRNA-splicing factor SF2 isof...   137   1e-30
ref|XP_006347507.1| PREDICTED: pre-mRNA-splicing factor SF2 isof...   137   1e-30
ref|XP_004235015.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   137   1e-30
ref|NP_001275408.1| pre-mRNA splicing factor-like protein [Solan...   137   1e-30
gb|EOX97378.1| SER/ARG-rich protein 34A, putative isoform 5 [The...   137   2e-30
gb|EOX97376.1| SER/ARG-rich protein 34A, putative isoform 3 [The...   137   2e-30
gb|EOX97375.1| SER/ARG-rich protein 34A isoform 2 [Theobroma cac...   137   2e-30
gb|EOX97374.1| SER/ARG-rich protein 34A, putative isoform 1 [The...   137   2e-30
gb|EMJ20418.1| hypothetical protein PRUPE_ppa017674mg, partial [...   136   2e-30
gb|EOY23696.1| SER/ARG-rich protein 34A [Theobroma cacao]             135   6e-30
ref|XP_006374084.1| hypothetical protein POPTR_0015s00690g [Popu...   135   7e-30
ref|XP_006493195.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   134   9e-30
ref|XP_006441230.1| hypothetical protein CICLE_v10021646mg [Citr...   134   9e-30
ref|XP_006441229.1| hypothetical protein CICLE_v10021646mg [Citr...   134   9e-30
gb|EPS60498.1| hypothetical protein M569_14305, partial [Genlise...   134   2e-29
ref|XP_006404145.1| hypothetical protein EUTSA_v10010586mg [Eutr...   133   2e-29
ref|XP_004502748.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   133   2e-29

>ref|XP_006376671.1| pre-mRNA splicing factor family protein [Populus trichocarpa]
           gi|550326255|gb|ERP54468.1| pre-mRNA splicing factor
           family protein [Populus trichocarpa]
          Length = 279

 Score =  140 bits (353), Expect = 2e-31
 Identities = 63/75 (84%), Positives = 70/75 (93%)
 Frame = +2

Query: 62  GVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDMKY 241
           G+S  S++RV+VRGLPSSASWQDLKDHMRKAGDVCFA+V RDGDG +GLVDYTN EDMKY
Sbjct: 117 GISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDGDGTLGLVDYTNHEDMKY 176

Query: 242 AIRKLDDTEFKNPWS 286
           AIRKLDDTEFKNPW+
Sbjct: 177 AIRKLDDTEFKNPWA 191


>ref|XP_002318458.1| predicted protein [Populus trichocarpa]
          Length = 280

 Score =  140 bits (353), Expect = 2e-31
 Identities = 63/75 (84%), Positives = 70/75 (93%)
 Frame = +2

Query: 62  GVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDMKY 241
           G+S  S++RV+VRGLPSSASWQDLKDHMRKAGDVCFA+V RDGDG +GLVDYTN EDMKY
Sbjct: 117 GISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDGDGTLGLVDYTNHEDMKY 176

Query: 242 AIRKLDDTEFKNPWS 286
           AIRKLDDTEFKNPW+
Sbjct: 177 AIRKLDDTEFKNPWA 191


>ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
           vinifera] gi|359490739|ref|XP_003634149.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
           vinifera] gi|302143975|emb|CBI23080.3| unnamed protein
           product [Vitis vinifera]
          Length = 250

 Score =  138 bits (347), Expect = 9e-31
 Identities = 63/75 (84%), Positives = 68/75 (90%)
 Frame = +2

Query: 62  GVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDMKY 241
           GVS  S+YRV+VRGLPSSASWQDLKDHMRKAGDVCFA+V RD DG  GLVDYTN EDMKY
Sbjct: 105 GVSRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKY 164

Query: 242 AIRKLDDTEFKNPWS 286
           AIRKLDDTEF+NPW+
Sbjct: 165 AIRKLDDTEFRNPWA 179


>ref|XP_006347508.1| PREDICTED: pre-mRNA-splicing factor SF2 isoform X2 [Solanum
           tuberosum]
          Length = 271

 Score =  137 bits (346), Expect = 1e-30
 Identities = 61/77 (79%), Positives = 69/77 (89%)
 Frame = +2

Query: 56  KQGVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDM 235
           + G+S  SDYRV++RGLPSSASWQDLKDHMRKAGDVCFA+V RD +G  GLVDYTN EDM
Sbjct: 108 RHGISRHSDYRVIIRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDM 167

Query: 236 KYAIRKLDDTEFKNPWS 286
           KYAIRKLDDTEF+NPW+
Sbjct: 168 KYAIRKLDDTEFRNPWT 184


>ref|XP_006347507.1| PREDICTED: pre-mRNA-splicing factor SF2 isoform X1 [Solanum
           tuberosum]
          Length = 273

 Score =  137 bits (346), Expect = 1e-30
 Identities = 61/77 (79%), Positives = 69/77 (89%)
 Frame = +2

Query: 56  KQGVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDM 235
           + G+S  SDYRV++RGLPSSASWQDLKDHMRKAGDVCFA+V RD +G  GLVDYTN EDM
Sbjct: 108 RHGISRHSDYRVIIRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDM 167

Query: 236 KYAIRKLDDTEFKNPWS 286
           KYAIRKLDDTEF+NPW+
Sbjct: 168 KYAIRKLDDTEFRNPWT 184


>ref|XP_004235015.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Solanum lycopersicum]
          Length = 288

 Score =  137 bits (346), Expect = 1e-30
 Identities = 61/77 (79%), Positives = 69/77 (89%)
 Frame = +2

Query: 56  KQGVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDM 235
           + G+S  SDYRV++RGLPSSASWQDLKDHMRKAGDVCFA+V RD +G  GLVDYTN EDM
Sbjct: 106 RHGISRHSDYRVIIRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDM 165

Query: 236 KYAIRKLDDTEFKNPWS 286
           KYAIRKLDDTEF+NPW+
Sbjct: 166 KYAIRKLDDTEFRNPWT 182


>ref|NP_001275408.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
           gi|76573323|gb|ABA46766.1| pre-mRNA splicing factor-like
           protein [Solanum tuberosum]
          Length = 269

 Score =  137 bits (346), Expect = 1e-30
 Identities = 61/77 (79%), Positives = 69/77 (89%)
 Frame = +2

Query: 56  KQGVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDM 235
           + G+S  SDYRV++RGLPSSASWQDLKDHMRKAGDVCFA+V RD +G  GLVDYTN EDM
Sbjct: 108 RHGISRHSDYRVIIRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDM 167

Query: 236 KYAIRKLDDTEFKNPWS 286
           KYAIRKLDDTEF+NPW+
Sbjct: 168 KYAIRKLDDTEFRNPWT 184


>gb|EOX97378.1| SER/ARG-rich protein 34A, putative isoform 5 [Theobroma cacao]
          Length = 255

 Score =  137 bits (344), Expect = 2e-30
 Identities = 60/75 (80%), Positives = 71/75 (94%)
 Frame = +2

Query: 62  GVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDMKY 241
           G SHRS++RV+VRGLPSSASWQDLKDHMRKAGDVCF +V+RDGDG MG+VDYTN +DMKY
Sbjct: 105 GTSHRSEFRVVVRGLPSSASWQDLKDHMRKAGDVCFTEVYRDGDGAMGIVDYTNYDDMKY 164

Query: 242 AIRKLDDTEFKNPWS 286
           AIRKLDD+EF+NP++
Sbjct: 165 AIRKLDDSEFRNPFA 179


>gb|EOX97376.1| SER/ARG-rich protein 34A, putative isoform 3 [Theobroma cacao]
          Length = 248

 Score =  137 bits (344), Expect = 2e-30
 Identities = 60/75 (80%), Positives = 71/75 (94%)
 Frame = +2

Query: 62  GVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDMKY 241
           G SHRS++RV+VRGLPSSASWQDLKDHMRKAGDVCF +V+RDGDG MG+VDYTN +DMKY
Sbjct: 105 GTSHRSEFRVVVRGLPSSASWQDLKDHMRKAGDVCFTEVYRDGDGAMGIVDYTNYDDMKY 164

Query: 242 AIRKLDDTEFKNPWS 286
           AIRKLDD+EF+NP++
Sbjct: 165 AIRKLDDSEFRNPFA 179


>gb|EOX97375.1| SER/ARG-rich protein 34A isoform 2 [Theobroma cacao]
           gi|508705481|gb|EOX97377.1| SER/ARG-rich protein 34A
           isoform 2 [Theobroma cacao] gi|508705483|gb|EOX97379.1|
           SER/ARG-rich protein 34A isoform 2 [Theobroma cacao]
          Length = 234

 Score =  137 bits (344), Expect = 2e-30
 Identities = 60/75 (80%), Positives = 71/75 (94%)
 Frame = +2

Query: 62  GVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDMKY 241
           G SHRS++RV+VRGLPSSASWQDLKDHMRKAGDVCF +V+RDGDG MG+VDYTN +DMKY
Sbjct: 105 GTSHRSEFRVVVRGLPSSASWQDLKDHMRKAGDVCFTEVYRDGDGAMGIVDYTNYDDMKY 164

Query: 242 AIRKLDDTEFKNPWS 286
           AIRKLDD+EF+NP++
Sbjct: 165 AIRKLDDSEFRNPFA 179


>gb|EOX97374.1| SER/ARG-rich protein 34A, putative isoform 1 [Theobroma cacao]
          Length = 285

 Score =  137 bits (344), Expect = 2e-30
 Identities = 60/75 (80%), Positives = 71/75 (94%)
 Frame = +2

Query: 62  GVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDMKY 241
           G SHRS++RV+VRGLPSSASWQDLKDHMRKAGDVCF +V+RDGDG MG+VDYTN +DMKY
Sbjct: 105 GTSHRSEFRVVVRGLPSSASWQDLKDHMRKAGDVCFTEVYRDGDGAMGIVDYTNYDDMKY 164

Query: 242 AIRKLDDTEFKNPWS 286
           AIRKLDD+EF+NP++
Sbjct: 165 AIRKLDDSEFRNPFA 179


>gb|EMJ20418.1| hypothetical protein PRUPE_ppa017674mg, partial [Prunus persica]
          Length = 252

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/75 (82%), Positives = 68/75 (90%)
 Frame = +2

Query: 62  GVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDMKY 241
           G S  S+YRV+VRGLPSSASWQDLKDHMRKAGDVCFA+V RD +G  GLVDYTNS+DMKY
Sbjct: 110 GASRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGLVDYTNSDDMKY 169

Query: 242 AIRKLDDTEFKNPWS 286
           AIRKLDDTEFKNPW+
Sbjct: 170 AIRKLDDTEFKNPWT 184


>gb|EOY23696.1| SER/ARG-rich protein 34A [Theobroma cacao]
          Length = 424

 Score =  135 bits (340), Expect = 6e-30
 Identities = 59/77 (76%), Positives = 69/77 (89%)
 Frame = +2

Query: 56  KQGVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDM 235
           K G+S  S+YRV+VRGLPSSASWQDLKDHMRKAGDVCFA++ RD DG  G+VDYTN +DM
Sbjct: 101 KFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEISRDSDGTFGIVDYTNYDDM 160

Query: 236 KYAIRKLDDTEFKNPWS 286
           KYA+RKLDDTEF+NPW+
Sbjct: 161 KYAVRKLDDTEFRNPWA 177


>ref|XP_006374084.1| hypothetical protein POPTR_0015s00690g [Populus trichocarpa]
           gi|550321685|gb|ERP51881.1| hypothetical protein
           POPTR_0015s00690g [Populus trichocarpa]
          Length = 260

 Score =  135 bits (339), Expect = 7e-30
 Identities = 60/75 (80%), Positives = 68/75 (90%)
 Frame = +2

Query: 62  GVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDMKY 241
           G+S  S++RV+VRGLPSSASWQDLKDHMRKAGDVCFA+V RD DG  G+VDYTN EDMKY
Sbjct: 106 GISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGVVDYTNHEDMKY 165

Query: 242 AIRKLDDTEFKNPWS 286
           AIRKLDDTEF+NPW+
Sbjct: 166 AIRKLDDTEFRNPWA 180


>ref|XP_006493195.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X1 [Citrus
           sinensis] gi|568880594|ref|XP_006493196.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform X2 [Citrus
           sinensis] gi|568880596|ref|XP_006493197.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform X3 [Citrus
           sinensis]
          Length = 277

 Score =  134 bits (338), Expect = 9e-30
 Identities = 60/75 (80%), Positives = 68/75 (90%)
 Frame = +2

Query: 62  GVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDMKY 241
           G+S  S+YRV+VRGLPSSASWQDLKDHMRKAGDVCFA+V RD +G  G+VDYTN EDMKY
Sbjct: 125 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 184

Query: 242 AIRKLDDTEFKNPWS 286
           AIRKLDDTEF+NPW+
Sbjct: 185 AIRKLDDTEFRNPWA 199


>ref|XP_006441230.1| hypothetical protein CICLE_v10021646mg [Citrus clementina]
           gi|557543492|gb|ESR54470.1| hypothetical protein
           CICLE_v10021646mg [Citrus clementina]
          Length = 271

 Score =  134 bits (338), Expect = 9e-30
 Identities = 60/75 (80%), Positives = 68/75 (90%)
 Frame = +2

Query: 62  GVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDMKY 241
           G+S  S+YRV+VRGLPSSASWQDLKDHMRKAGDVCFA+V RD +G  G+VDYTN EDMKY
Sbjct: 119 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 178

Query: 242 AIRKLDDTEFKNPWS 286
           AIRKLDDTEF+NPW+
Sbjct: 179 AIRKLDDTEFRNPWA 193


>ref|XP_006441229.1| hypothetical protein CICLE_v10021646mg [Citrus clementina]
           gi|567897486|ref|XP_006441231.1| hypothetical protein
           CICLE_v10021646mg [Citrus clementina]
           gi|567897488|ref|XP_006441232.1| hypothetical protein
           CICLE_v10021646mg [Citrus clementina]
           gi|567897490|ref|XP_006441233.1| hypothetical protein
           CICLE_v10021646mg [Citrus clementina]
           gi|557543491|gb|ESR54469.1| hypothetical protein
           CICLE_v10021646mg [Citrus clementina]
           gi|557543493|gb|ESR54471.1| hypothetical protein
           CICLE_v10021646mg [Citrus clementina]
           gi|557543494|gb|ESR54472.1| hypothetical protein
           CICLE_v10021646mg [Citrus clementina]
           gi|557543495|gb|ESR54473.1| hypothetical protein
           CICLE_v10021646mg [Citrus clementina]
          Length = 271

 Score =  134 bits (338), Expect = 9e-30
 Identities = 60/75 (80%), Positives = 68/75 (90%)
 Frame = +2

Query: 62  GVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDMKY 241
           G+S  S+YRV+VRGLPSSASWQDLKDHMRKAGDVCFA+V RD +G  G+VDYTN EDMKY
Sbjct: 119 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKY 178

Query: 242 AIRKLDDTEFKNPWS 286
           AIRKLDDTEF+NPW+
Sbjct: 179 AIRKLDDTEFRNPWA 193


>gb|EPS60498.1| hypothetical protein M569_14305, partial [Genlisea aurea]
          Length = 231

 Score =  134 bits (336), Expect = 2e-29
 Identities = 59/75 (78%), Positives = 67/75 (89%)
 Frame = +2

Query: 62  GVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDMKY 241
           G S  S+YRV+VRGLPSSASWQDLKDHMRK GD+CFA+V+RD +G  GLVDYTN EDMKY
Sbjct: 116 GASRHSEYRVIVRGLPSSASWQDLKDHMRKCGDICFAEVYRDSEGTYGLVDYTNYEDMKY 175

Query: 242 AIRKLDDTEFKNPWS 286
           AIRKLDD+EFKNPW+
Sbjct: 176 AIRKLDDSEFKNPWT 190


>ref|XP_006404145.1| hypothetical protein EUTSA_v10010586mg [Eutrema salsugineum]
           gi|557105264|gb|ESQ45598.1| hypothetical protein
           EUTSA_v10010586mg [Eutrema salsugineum]
          Length = 293

 Score =  133 bits (335), Expect = 2e-29
 Identities = 60/75 (80%), Positives = 68/75 (90%)
 Frame = +2

Query: 62  GVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDMKY 241
           GVS  S++RV+VRGLPSSASWQDLKDHMRKAGDVCFA+V RD DG  G+VDYTN +DMKY
Sbjct: 118 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKY 177

Query: 242 AIRKLDDTEFKNPWS 286
           AIRKLDDTEF+NPW+
Sbjct: 178 AIRKLDDTEFRNPWA 192


>ref|XP_004502748.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X6 [Cicer
           arietinum]
          Length = 272

 Score =  133 bits (335), Expect = 2e-29
 Identities = 60/75 (80%), Positives = 68/75 (90%)
 Frame = +2

Query: 62  GVSHRSDYRVMVRGLPSSASWQDLKDHMRKAGDVCFAQVFRDGDGVMGLVDYTNSEDMKY 241
           GVS  S++RV+VRGLPSSASWQDLKDHMRKAGDVCFA+V RD +G  GLVDYTN +DMKY
Sbjct: 114 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKY 173

Query: 242 AIRKLDDTEFKNPWS 286
           AIRKLDDTEF+NPW+
Sbjct: 174 AIRKLDDTEFRNPWA 188


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