BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00029556
         (696 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containi...   132   7e-44
emb|CBI28140.3| unnamed protein product [Vitis vinifera]              132   7e-44
gb|EMJ04669.1| hypothetical protein PRUPE_ppa024598mg [Prunus pe...   136   1e-43
gb|AEP33761.1| organelle transcript processing 82, partial [Cruc...   131   1e-42
ref|XP_003533068.2| PREDICTED: putative pentatricopeptide repeat...   131   4e-42
gb|AEP33758.1| organelle transcript processing 82, partial [Barb...   130   4e-42
gb|AEP33768.1| organelle transcript processing 82, partial [Nast...   129   4e-42
ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis tha...   129   5e-42
ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Caps...   129   5e-42
ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat...   132   5e-42
emb|CBI36352.3| unnamed protein product [Vitis vinifera]              132   5e-42
gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily p...   132   6e-42
gb|AEP33773.1| organelle transcript processing 82, partial [Lobu...   129   6e-42
gb|AEP33770.1| organelle transcript processing 82, partial [Raph...   129   8e-42
ref|XP_002892433.1| pentatricopeptide repeat-containing protein ...   128   1e-41
gb|AEP33759.1| organelle transcript processing 82, partial [Bras...   129   1e-41
ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [S...   120   2e-41
tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea m...   120   2e-41
ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea ma...   120   2e-41
gb|AEP33771.1| organelle transcript processing 82, partial [Thla...   125   3e-41

>ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  132 bits (333), Expect(2) = 7e-44
 Identities = 65/136 (47%), Positives = 91/136 (66%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL AC+ + N+ +AE+AAQ++IELDP N   YVLLSN+Y+S   W  A ++R LM    +
Sbjct: 514 LLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 573

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K PGCSA+E+ GVVHEF   D  HP+S EIY+  D + + +K   Y  DK +V+ +++E
Sbjct: 574 KKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDE 633

Query: 366 KNKEEALHRHIEKLAL 413
           K KE  L  H EKLA+
Sbjct: 634 KEKENELSLHSEKLAI 649



 Score = 71.6 bits (174), Expect(2) = 7e-44
 Identities = 30/65 (46%), Positives = 44/65 (67%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + F ++S+   + +R+VKNLR+CSDCH A++ +SE+   EI V D   FHHF+ G C
Sbjct: 646 KLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSC 705

Query: 581 LCGDF 595
            C DF
Sbjct: 706 SCRDF 710


>emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  132 bits (333), Expect(2) = 7e-44
 Identities = 65/136 (47%), Positives = 91/136 (66%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL AC+ + N+ +AE+AAQ++IELDP N   YVLLSN+Y+S   W  A ++R LM    +
Sbjct: 383 LLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 442

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K PGCSA+E+ GVVHEF   D  HP+S EIY+  D + + +K   Y  DK +V+ +++E
Sbjct: 443 KKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDE 502

Query: 366 KNKEEALHRHIEKLAL 413
           K KE  L  H EKLA+
Sbjct: 503 KEKENELSLHSEKLAI 518



 Score = 71.6 bits (174), Expect(2) = 7e-44
 Identities = 30/65 (46%), Positives = 44/65 (67%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + F ++S+   + +R+VKNLR+CSDCH A++ +SE+   EI V D   FHHF+ G C
Sbjct: 515 KLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSC 574

Query: 581 LCGDF 595
            C DF
Sbjct: 575 SCRDF 579


>gb|EMJ04669.1| hypothetical protein PRUPE_ppa024598mg [Prunus persica]
          Length = 722

 Score =  136 bits (342), Expect(2) = 1e-43
 Identities = 65/136 (47%), Positives = 94/136 (69%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL AC+ + N+E AE+AAQ+++ELDP +D  YVLLSN+Y+S  KW EA ++R LM    V
Sbjct: 525 LLGACRVHGNLEAAERAAQQLLELDPDDDGAYVLLSNLYSSMKKWEEAKRIRELMAERNV 584

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K PGCS +E+DG+VHEF   D  HP+S  IY+    + + +KK  Y  +K +V+ +++E
Sbjct: 585 KKAPGCSLIEVDGIVHEFVKGDSSHPQSTHIYEMLQDMIERLKKAGYVPEKSEVLLDIDE 644

Query: 366 KNKEEALHRHIEKLAL 413
           + KE AL  H EKLA+
Sbjct: 645 EEKETALSLHSEKLAI 660



 Score = 67.4 bits (163), Expect(2) = 1e-43
 Identities = 29/65 (44%), Positives = 42/65 (64%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + F +IS+   + +R+VKNLR+CSDCH A +++S++   EI V D   FH F  G C
Sbjct: 657 KLAIAFGLISTNPGTTIRVVKNLRVCSDCHTATKIISKVYNREIIVRDRNRFHRFQDGSC 716

Query: 581 LCGDF 595
            C DF
Sbjct: 717 SCKDF 721


>gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  131 bits (330), Expect(2) = 1e-42
 Identities = 61/136 (44%), Positives = 94/136 (69%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL+AC+ Y NVEL E  AQ +I+++P N   YVLLSN+YA+ G+W E A++RAL+    +
Sbjct: 513 LLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGM 572

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K PGCS++E+D VVHEF   D+ HPR++EIY   +++   +++  +  D  +V++ + E
Sbjct: 573 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEE 632

Query: 366 KNKEEALHRHIEKLAL 413
           + KE AL  H EKLA+
Sbjct: 633 EWKEGALRHHSEKLAI 648



 Score = 68.6 bits (166), Expect(2) = 1e-42
 Identities = 29/65 (44%), Positives = 44/65 (67%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + F +IS++  +++ IVKNLR+C +CH A +L+S++ K EI   D T FHHF  G C
Sbjct: 645 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 704

Query: 581 LCGDF 595
            C D+
Sbjct: 705 SCNDY 709


>ref|XP_003533068.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 738

 Score =  131 bits (330), Expect(2) = 4e-42
 Identities = 65/136 (47%), Positives = 94/136 (69%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL AC+ ++NV+LAE AA++++EL+P N + YVLL N+YA+  +W    QVR LM    +
Sbjct: 541 LLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGI 600

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K PGCS +EL+G V+EF A DQ HP+SKEIY   + + + + K  Y  D  +V  +L E
Sbjct: 601 KKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGE 660

Query: 366 KNKEEALHRHIEKLAL 413
           ++KE AL+RH EKLA+
Sbjct: 661 EDKETALYRHSEKLAI 676



 Score = 67.0 bits (162), Expect(2) = 4e-42
 Identities = 32/65 (49%), Positives = 41/65 (63%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + +A+ISS     +RIVKNLR+C DCH   +LVSE    E+ V D T FHHF  G C
Sbjct: 673 KLAIAYALISSGPGITIRIVKNLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSC 732

Query: 581 LCGDF 595
            C +F
Sbjct: 733 SCNNF 737


>gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  130 bits (326), Expect(2) = 4e-42
 Identities = 60/136 (44%), Positives = 94/136 (69%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL+AC+ + NVEL E  AQK+I+++P N   YVLLSN+YA+ G+W E A +RAL+    +
Sbjct: 513 LLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGM 572

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K PGCS++E+D VVHEF   D+ HPR++EIY   +++   +++  +  D  +V++ + E
Sbjct: 573 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEE 632

Query: 366 KNKEEALHRHIEKLAL 413
           + K+ AL  H EKLA+
Sbjct: 633 EFKQGALRHHSEKLAI 648



 Score = 68.6 bits (166), Expect(2) = 4e-42
 Identities = 29/65 (44%), Positives = 44/65 (67%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + F +IS++  +++ IVKNLR+C +CH A +L+S++ K EI   D T FHHF  G C
Sbjct: 645 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 704

Query: 581 LCGDF 595
            C D+
Sbjct: 705 SCNDY 709


>gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  129 bits (324), Expect(2) = 4e-42
 Identities = 59/136 (43%), Positives = 93/136 (68%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL+AC+ + NVEL EK AQ + +++P N   YVLLSN+YA+ G+W E A++R L+    +
Sbjct: 473 LLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGM 532

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K PGCS++E+D VVHEF   D+ HPR++EIY   +++   +++  +  D  +V++ + E
Sbjct: 533 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEE 592

Query: 366 KNKEEALHRHIEKLAL 413
           + KE AL  H EKLA+
Sbjct: 593 EFKEGALRHHSEKLAI 608



 Score = 69.3 bits (168), Expect(2) = 4e-42
 Identities = 29/65 (44%), Positives = 44/65 (67%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + F +IS++  +++ IVKNLR+C +CH A +L+S++ K EI   D T FHHF  G C
Sbjct: 605 KLAIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 664

Query: 581 LCGDF 595
            C D+
Sbjct: 665 SCNDY 669


>ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis thaliana]
           gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g08070 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15
           [Arabidopsis thaliana] gi|332190118|gb|AEE28239.1|
           chloroplast RNA editing factor [Arabidopsis thaliana]
          Length = 741

 Score =  129 bits (325), Expect(2) = 5e-42
 Identities = 61/136 (44%), Positives = 93/136 (68%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL+AC+ + NVEL E  A+ +I+++P N   YVLLSN+YAS G+W E A+ RAL+    +
Sbjct: 544 LLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGM 603

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K PGCS++E+D VVHEF   D+ HPR++EIY   +++   ++K  +  D  +V++ + E
Sbjct: 604 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEE 663

Query: 366 KNKEEALHRHIEKLAL 413
           + KE AL  H EKLA+
Sbjct: 664 EWKEGALRHHSEKLAI 679



 Score = 68.6 bits (166), Expect(2) = 5e-42
 Identities = 29/65 (44%), Positives = 44/65 (67%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + F +IS++  +++ IVKNLR+C +CH A +L+S++ K EI   D T FHHF  G C
Sbjct: 676 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 735

Query: 581 LCGDF 595
            C D+
Sbjct: 736 SCNDY 740


>ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Capsella rubella]
           gi|482575565|gb|EOA39752.1| hypothetical protein
           CARUB_v10008399mg [Capsella rubella]
          Length = 740

 Score =  129 bits (325), Expect(2) = 5e-42
 Identities = 60/136 (44%), Positives = 94/136 (69%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL+AC+ + NVEL E  AQ +I+++P N   YVLLSN+YA+ G+W E A++RAL+    +
Sbjct: 543 LLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKIRALLNDKGM 602

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K PGCS++E+D VVHEF   D+ HPR++EIY   +++   +++  +  D  +V++ + E
Sbjct: 603 KKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEE 662

Query: 366 KNKEEALHRHIEKLAL 413
           + KE AL  H EKLA+
Sbjct: 663 EWKEGALRHHSEKLAI 678



 Score = 68.6 bits (166), Expect(2) = 5e-42
 Identities = 29/65 (44%), Positives = 44/65 (67%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + F +IS++  +++ IVKNLR+C +CH A +L+S++ K EI   D T FHHF  G C
Sbjct: 675 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 734

Query: 581 LCGDF 595
            C D+
Sbjct: 735 SCNDY 739


>ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  132 bits (332), Expect(2) = 5e-42
 Identities = 63/136 (46%), Positives = 94/136 (69%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL AC+ +R+ E+AE AAQ+++EL+P N + YVLL N+YA+  +W +  +VR LM    +
Sbjct: 527 LLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGI 586

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K PGCS +E++G VHEF A DQ HP+SKEIY   D+++  +K   Y  D  +V  ++ E
Sbjct: 587 KKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGE 646

Query: 366 KNKEEALHRHIEKLAL 413
           + KE A++RH EKLA+
Sbjct: 647 EEKESAVYRHSEKLAI 662



 Score = 65.9 bits (159), Expect(2) = 5e-42
 Identities = 31/65 (47%), Positives = 41/65 (63%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + F +ISS     +RIVKNLR+C DCH   +LVS++   E+ V D T FHHF  G C
Sbjct: 659 KLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSC 718

Query: 581 LCGDF 595
            C D+
Sbjct: 719 SCKDY 723


>emb|CBI36352.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score =  132 bits (332), Expect(2) = 5e-42
 Identities = 63/136 (46%), Positives = 94/136 (69%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL AC+ +R+ E+AE AAQ+++EL+P N + YVLL N+YA+  +W +  +VR LM    +
Sbjct: 408 LLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGI 467

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K PGCS +E++G VHEF A DQ HP+SKEIY   D+++  +K   Y  D  +V  ++ E
Sbjct: 468 KKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGE 527

Query: 366 KNKEEALHRHIEKLAL 413
           + KE A++RH EKLA+
Sbjct: 528 EEKESAVYRHSEKLAI 543



 Score = 65.9 bits (159), Expect(2) = 5e-42
 Identities = 31/65 (47%), Positives = 41/65 (63%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + F +ISS     +RIVKNLR+C DCH   +LVS++   E+ V D T FHHF  G C
Sbjct: 540 KLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSC 599

Query: 581 LCGDF 595
            C D+
Sbjct: 600 SCKDY 604


>gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 733

 Score =  132 bits (331), Expect(2) = 6e-42
 Identities = 67/137 (48%), Positives = 91/137 (66%), Gaps = 1/137 (0%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL ACQ + NVELAEKA  +++ELDPGN   YVLLSNVYA  GKW   +++R  M+   +
Sbjct: 535 LLGACQIHGNVELAEKACSRLLELDPGNHGAYVLLSNVYAKTGKWDSVSRLRKHMRVTGL 594

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K+ GCS +E++GVVHEF A D  HP SKEIY   D++   +K V Y   K  +++ + E
Sbjct: 595 KKEQGCSTIEVNGVVHEFLAGDNRHPLSKEIYSKLDEIVARLKSVGYVPKKSHLLQLIEE 654

Query: 366 KN-KEEALHRHIEKLAL 413
            + +E AL  H EKLA+
Sbjct: 655 DDLQEHALKLHSEKLAI 671



 Score = 65.9 bits (159), Expect(2) = 6e-42
 Identities = 29/65 (44%), Positives = 39/65 (60%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + F ++  EA   +RI+KNLR+C DCH   +LVS L   EI + D   FHHF  G C
Sbjct: 668 KLAIAFGLLYMEAPQPIRIIKNLRVCGDCHSVAKLVSRLYNREIILRDRYRFHHFGGGHC 727

Query: 581 LCGDF 595
            C D+
Sbjct: 728 SCKDY 732


>gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  129 bits (324), Expect(2) = 6e-42
 Identities = 60/136 (44%), Positives = 94/136 (69%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL+AC+ + NVEL E  AQ +I+++P N   YVLLSN+YA+ G+W E A++RAL+    +
Sbjct: 498 LLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGM 557

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K PGCS++E+D VVHEF   D+ HPR++EIY   +++   +++  +  D  +V++ + E
Sbjct: 558 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEE 617

Query: 366 KNKEEALHRHIEKLAL 413
           + KE AL  H EKLA+
Sbjct: 618 EWKEGALRHHSEKLAI 633



 Score = 68.6 bits (166), Expect(2) = 6e-42
 Identities = 29/65 (44%), Positives = 44/65 (67%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + F +IS++  +++ IVKNLR+C +CH A +L+S++ K EI   D T FHHF  G C
Sbjct: 630 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 689

Query: 581 LCGDF 595
            C D+
Sbjct: 690 SCNDY 694


>gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  129 bits (325), Expect(2) = 8e-42
 Identities = 59/136 (43%), Positives = 94/136 (69%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL+AC+ + N+ELAE  AQK+I+++P N   YVLLSN+YA+ G+W + A+VR ++    +
Sbjct: 478 LLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGM 537

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K PGCS++E+D VVHEF   D+ HPR +EIY   +++   +++  +  D  +V++ + E
Sbjct: 538 KKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEE 597

Query: 366 KNKEEALHRHIEKLAL 413
           + KE AL  H EKLA+
Sbjct: 598 EWKEGALRHHSEKLAI 613



 Score = 67.8 bits (164), Expect(2) = 8e-42
 Identities = 29/65 (44%), Positives = 44/65 (67%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + F +IS++  +++ IVKNLR+C +CH A +L+S++ K EI   D T FHHF  G C
Sbjct: 610 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVC 669

Query: 581 LCGDF 595
            C D+
Sbjct: 670 SCCDY 674


>ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338275|gb|EFH68692.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 741

 Score =  128 bits (321), Expect(2) = 1e-41
 Identities = 61/136 (44%), Positives = 93/136 (68%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL+AC+   NVEL E  AQ +I+++P N   YVLLSN+YA+ G+W E A++RAL+    +
Sbjct: 544 LLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGM 603

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K PGCS++E+D VVHEF   D+ HPR++EIY   +++   ++K  +  D  +V++ + E
Sbjct: 604 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEE 663

Query: 366 KNKEEALHRHIEKLAL 413
           + KE AL  H EKLA+
Sbjct: 664 EWKEGALRHHSEKLAI 679



 Score = 68.6 bits (166), Expect(2) = 1e-41
 Identities = 29/65 (44%), Positives = 44/65 (67%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + F +IS++  +++ IVKNLR+C +CH A +L+S++ K EI   D T FHHF  G C
Sbjct: 676 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 735

Query: 581 LCGDF 595
            C D+
Sbjct: 736 SCNDY 740


>gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  129 bits (324), Expect(2) = 1e-41
 Identities = 58/136 (42%), Positives = 96/136 (70%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL+AC+ + N+ELAE  AQK++E++P N   YVLLSN+YA+ G+W + A++R ++    +
Sbjct: 494 LLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGM 553

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K PGCS++E+D VVHEF   D+ HP+S+EIY+  +++   +++  +  D  +V++ + E
Sbjct: 554 KKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEE 613

Query: 366 KNKEEALHRHIEKLAL 413
           + KE AL  H EKLA+
Sbjct: 614 EWKEGALRHHSEKLAI 629



 Score = 67.4 bits (163), Expect(2) = 1e-41
 Identities = 28/65 (43%), Positives = 44/65 (67%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + F +IS++  +++ +VKNLR+C +CH A +L+S++ K EI   D T FHHF  G C
Sbjct: 626 KLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVC 685

Query: 581 LCGDF 595
            C D+
Sbjct: 686 SCCDY 690


>ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
           gi|241927061|gb|EES00206.1| hypothetical protein
           SORBIDRAFT_03g004125 [Sorghum bicolor]
          Length = 627

 Score =  120 bits (301), Expect(2) = 2e-41
 Identities = 56/136 (41%), Positives = 86/136 (63%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL AC+ + N E+ E  A++++ELDP N   Y+LLSN+YA   +W +  ++R  +    +
Sbjct: 430 LLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGI 489

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K+PGCS +E+DG++HEF A DQ HP SKEIY   + +   +  V Y  D  +V   + E
Sbjct: 490 KKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTEVFVEVAE 549

Query: 366 KNKEEALHRHIEKLAL 413
           K K++ L+ H EKLA+
Sbjct: 550 KEKKKVLYWHSEKLAI 565



 Score = 75.9 bits (185), Expect(2) = 2e-41
 Identities = 33/65 (50%), Positives = 46/65 (70%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + FA++SS+  + +RIVKNLR+C DCH A++L+S L   E+ V D T FHHF  GFC
Sbjct: 562 KLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFC 621

Query: 581 LCGDF 595
            C D+
Sbjct: 622 SCKDY 626


>tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  120 bits (300), Expect(2) = 2e-41
 Identities = 58/136 (42%), Positives = 88/136 (64%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL AC+ ++N ++ + AA  V ELDP +    VLL N+YAS GKW +AA+VR +MKA  V
Sbjct: 436 LLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGV 495

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K+P CS V+++  VH F A D  HP+S +IY+  +++   +KK  Y  +   V+ ++NE
Sbjct: 496 KKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINE 555

Query: 366 KNKEEALHRHIEKLAL 413
           + +E  L  H EK+AL
Sbjct: 556 QERETKLKYHSEKIAL 571



 Score = 75.9 bits (185), Expect(2) = 2e-41
 Identities = 34/65 (52%), Positives = 45/65 (69%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ L FA+I+  A + +RI+KN+RIC DCH A + VS++ K EI V D   FHHFS G C
Sbjct: 568 KIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSC 627

Query: 581 LCGDF 595
            CGD+
Sbjct: 628 SCGDY 632


>ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
           gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  120 bits (300), Expect(2) = 2e-41
 Identities = 58/136 (42%), Positives = 88/136 (64%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL AC+ ++N ++ + AA  V ELDP +    VLL N+YAS GKW +AA+VR +MKA  V
Sbjct: 333 LLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGV 392

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K+P CS V+++  VH F A D  HP+S +IY+  +++   +KK  Y  +   V+ ++NE
Sbjct: 393 KKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINE 452

Query: 366 KNKEEALHRHIEKLAL 413
           + +E  L  H EK+AL
Sbjct: 453 QERETKLKYHSEKIAL 468



 Score = 75.9 bits (185), Expect(2) = 2e-41
 Identities = 34/65 (52%), Positives = 45/65 (69%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ L FA+I+  A + +RI+KN+RIC DCH A + VS++ K EI V D   FHHFS G C
Sbjct: 465 KIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSC 524

Query: 581 LCGDF 595
            CGD+
Sbjct: 525 SCGDY 529


>gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  125 bits (314), Expect(2) = 3e-41
 Identities = 58/136 (42%), Positives = 94/136 (69%)
 Frame = +3

Query: 6   LLRACQSYRNVELAEKAAQKVIELDPGNDSHYVLLSNVYASRGKWTEAAQVRALMKACRV 185
           LL+AC+ + N+ELAE  A+ +++++P N   YVLLSN+YA+ G+W E A+VRAL+    +
Sbjct: 476 LLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGM 535

Query: 186 QKKPGCSAVELDGVVHEFEASDQ*HPRSKEIYKACDKLAKHVKKVRYEADKGKVMRNLNE 365
           +K PGCS++E+D  VHEF   D+ HPR++EIY   +++   +++  +  D  +V++ + E
Sbjct: 536 KKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEE 595

Query: 366 KNKEEALHRHIEKLAL 413
           + KE AL  H EKLA+
Sbjct: 596 EWKEGALRHHSEKLAI 611



 Score = 70.1 bits (170), Expect(2) = 3e-41
 Identities = 31/65 (47%), Positives = 44/65 (67%)
 Frame = +2

Query: 401 KVGLGFAVISSEARSQVRIVKNLRICSDCHRALQLVSELEKSEITV*D*TLFHHFSTGFC 580
           K+ + F +IS++  +++ IVKNLR+C +CH A +LVS++ K EI   D T FHHF  G C
Sbjct: 608 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVC 667

Query: 581 LCGDF 595
            C DF
Sbjct: 668 SCNDF 672