BLASTX nr result

ID: Zingiber24_contig00018545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00018545
         (432 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS58507.1| hypothetical protein TRIUR3_33928 [Triticum urartu]     64   2e-08
gb|EAY93086.1| hypothetical protein OsI_14886 [Oryza sativa Indi...    63   5e-08
gb|AFW57872.1| hypothetical protein ZEAMMB73_498712 [Zea mays]         55   1e-05

>gb|EMS58507.1| hypothetical protein TRIUR3_33928 [Triticum urartu]
          Length = 88

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/49 (59%), Positives = 33/49 (67%)
 Frame = +2

Query: 164 RRPSFRTRDLKGCKPRGFLPPPSAPSRYTNYNTLGATLCDRKGGRHQKP 310
           R+P F  R   GC PRG   PPSAPSRY NY+TL A  CD  GGR++KP
Sbjct: 40  RQPLFSGRAANGCMPRGSRVPPSAPSRYANYHTLDAGACDHGGGRNRKP 88


>gb|EAY93086.1| hypothetical protein OsI_14886 [Oryza sativa Indica Group]
          Length = 113

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 39/86 (45%), Positives = 42/86 (48%), Gaps = 13/86 (15%)
 Frame = +2

Query: 77  PEAVAAARPPSGLRRPELHPR----LVDFPATARRPS---------FRTRDLKGCKPRGF 217
           PE   A     G R+    PR    LV F A +  P          FR R   GC PRGF
Sbjct: 21  PEMALADAAGEGRRQQPPRPRPPALLVPFRARSSSPHRRQQPPPALFRGRAANGCMPRGF 80

Query: 218 LPPPSAPSRYTNYNTLGATLCDRKGG 295
             PPSAPSRY NY+TL A LCD  GG
Sbjct: 81  RVPPSAPSRYANYHTLDAGLCDDHGG 106


>gb|AFW57872.1| hypothetical protein ZEAMMB73_498712 [Zea mays]
          Length = 104

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 39/85 (45%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
 Frame = +2

Query: 71  SQPE-AVAAARPPSGLRRPELHPRLVDFPATA----RRPSFRTRDLKGCKPRGFLPPPSA 235
           S PE A   +   +G RRP   P LV F        R+P F      GC PRGF  PPSA
Sbjct: 25  SAPELASTGSTEVAGERRP---PSLVPFRPRQHGGRRQPLFHGPAAGGCMPRGFRVPPSA 81

Query: 236 PSRYTNYNTLGATLCDRKGGRHQKP 310
           PSRY NY+TL A  C    GR  KP
Sbjct: 82  PSRYVNYHTLDAGACAH--GRAGKP 104


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