BLASTX nr result
ID: Zingiber23_contig00055010
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00055010
(257 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250454.1| PREDICTED: pentatricopeptide repeat-containi... 96 6e-18
ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containi... 95 8e-18
gb|EMJ28402.1| hypothetical protein PRUPE_ppa019251mg [Prunus pe... 94 2e-17
ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera] 94 2e-17
gb|EEE63475.1| hypothetical protein OsJ_18289 [Oryza sativa Japo... 94 2e-17
gb|EAZ08599.1| hypothetical protein OsI_30870 [Oryza sativa Indi... 94 2e-17
ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group] g... 94 2e-17
ref|XP_004515286.1| PREDICTED: pentatricopeptide repeat-containi... 92 5e-17
ref|XP_004292932.1| PREDICTED: pentatricopeptide repeat-containi... 92 7e-17
ref|XP_006655248.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
gb|EMS48015.1| hypothetical protein TRIUR3_15376 [Triticum urartu] 87 2e-15
ref|XP_002528570.1| pentatricopeptide repeat-containing protein,... 87 2e-15
ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
ref|XP_002301973.2| pentatricopeptide repeat-containing family p... 85 9e-15
ref|XP_006587447.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
gb|ESW24601.1| hypothetical protein PHAVU_004G144300g [Phaseolus... 82 9e-14
ref|XP_006828790.1| hypothetical protein AMTR_s00001p00116120 [A... 81 2e-13
gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays] 81 2e-13
ref|XP_002440983.1| hypothetical protein SORBIDRAFT_09g018390 [S... 80 2e-13
>ref|XP_004250454.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Solanum lycopersicum]
Length = 828
Score = 95.5 bits (236), Expect = 6e-18
Identities = 46/85 (54%), Positives = 59/85 (69%)
Frame = +3
Query: 3 RMYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCG 182
RM S+GF D S+SS L A SD+EDL MG Q+H +VIKT E+ + ++SAL+DMYGKC
Sbjct: 310 RMNSDGFRSDGTSISSVLPAVSDLEDLKMGVQVHSHVIKTGFESDNCIISALVDMYGKCR 369
Query: 183 CADEMIRVFDTVTTPDVGSCNALLA 257
C EM RVF+ D+G NAL+A
Sbjct: 370 CTSEMSRVFEGAEEIDLGGFNALVA 394
>ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 95.1 bits (235), Expect = 8e-18
Identities = 46/85 (54%), Positives = 61/85 (71%)
Frame = +3
Query: 3 RMYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCG 182
RM+SEGF D VS LSA DV+++++G Q+HGYV+K + VV+AL+DMYGKCG
Sbjct: 143 RMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCG 202
Query: 183 CADEMIRVFDTVTTPDVGSCNALLA 257
ADE++RVF + DV SCNAL+A
Sbjct: 203 RADEIVRVFHESSHMDVASCNALVA 227
>gb|EMJ28402.1| hypothetical protein PRUPE_ppa019251mg [Prunus persica]
Length = 654
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/84 (54%), Positives = 59/84 (70%)
Frame = +3
Query: 3 RMYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCG 182
+M+SEGF+ D S+SS L A +EDL MG QIHGYV+K L + VVSAL+DMYGKC
Sbjct: 136 KMHSEGFQPDGSSISSALPAVGHLEDLGMGIQIHGYVVKQGLGSDKCVVSALIDMYGKCA 195
Query: 183 CADEMIRVFDTVTTPDVGSCNALL 254
C+ E +VF + DVG+CNAL+
Sbjct: 196 CSFETSQVFHEMDQMDVGACNALV 219
>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/83 (55%), Positives = 55/83 (66%)
Frame = +3
Query: 6 MYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCGC 185
M+ GFE D ++SS L A D+EDL MG IHGYVIK L + V SAL+DMYGKC C
Sbjct: 241 MHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSC 300
Query: 186 ADEMIRVFDTVTTPDVGSCNALL 254
EM +VFD + DVGSCNA +
Sbjct: 301 TSEMSQVFDQMDHMDVGSCNAFI 323
>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/83 (55%), Positives = 55/83 (66%)
Frame = +3
Query: 6 MYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCGC 185
M+ GFE D ++SS L A D+EDL MG IHGYVIK L + V SAL+DMYGKC C
Sbjct: 241 MHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSC 300
Query: 186 ADEMIRVFDTVTTPDVGSCNALL 254
EM +VFD + DVGSCNA +
Sbjct: 301 TSEMSQVFDQMDHMDVGSCNAFI 323
>gb|EEE63475.1| hypothetical protein OsJ_18289 [Oryza sativa Japonica Group]
Length = 490
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 3 RMYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCG 182
RM+ EGF D VS LSA DV D+ +G Q+HGYV+K + V +AL+DMYGKCG
Sbjct: 146 RMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCG 205
Query: 183 CADEMIRVFDTVTTPDVGSCNALLA 257
ADE++RVFD + DV SCNAL+A
Sbjct: 206 RADEIVRVFDESSHMDVASCNALVA 230
>gb|EAZ08599.1| hypothetical protein OsI_30870 [Oryza sativa Indica Group]
Length = 410
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 3 RMYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCG 182
RM+ EGF D VS LSA DV D+ +G Q+HGYV+K + V +AL+DMYGKCG
Sbjct: 145 RMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCG 204
Query: 183 CADEMIRVFDTVTTPDVGSCNALLA 257
ADE++RVFD + DV SCNAL+A
Sbjct: 205 RADEIVRVFDESSHMDVASCNALVA 229
>ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa
Japonica Group] gi|113578900|dbj|BAF17263.1|
Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 3 RMYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCG 182
RM+ EGF D VS LSA DV D+ +G Q+HGYV+K + V +AL+DMYGKCG
Sbjct: 146 RMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCG 205
Query: 183 CADEMIRVFDTVTTPDVGSCNALLA 257
ADE++RVFD + DV SCNAL+A
Sbjct: 206 RADEIVRVFDESSHMDVASCNALVA 230
>ref|XP_004515286.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cicer arietinum]
Length = 730
Score = 92.4 bits (228), Expect = 5e-17
Identities = 45/83 (54%), Positives = 57/83 (68%)
Frame = +3
Query: 6 MYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCGC 185
M SEGF D +VS L ++ED+ MG Q+HGYVIK L++ + V+SALLDMYGKCGC
Sbjct: 228 MISEGFLPDGSAVSCVLPGIGNLEDVLMGKQVHGYVIKQGLDSDNFVISALLDMYGKCGC 287
Query: 186 ADEMIRVFDTVTTPDVGSCNALL 254
EM RVFD + ++GS NA L
Sbjct: 288 TSEMSRVFDEIDQTEIGSLNAFL 310
>ref|XP_004292932.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Fragaria vesca subsp. vesca]
Length = 755
Score = 92.0 bits (227), Expect = 7e-17
Identities = 46/84 (54%), Positives = 59/84 (70%)
Frame = +3
Query: 3 RMYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCG 182
+M+S+GFE D S+SS L A ++EDL +G QIHG VIK L++ VVSAL+DMYGKC
Sbjct: 237 KMHSQGFEPDGSSISSVLPAVGELEDLDIGVQIHGQVIKRGLKSDKCVVSALVDMYGKCA 296
Query: 183 CADEMIRVFDTVTTPDVGSCNALL 254
C EM RV + DVG+CNAL+
Sbjct: 297 CTLEMSRVVGEMDELDVGACNALV 320
>ref|XP_006655248.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Oryza brachyantha]
Length = 584
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/85 (50%), Positives = 57/85 (67%)
Frame = +3
Query: 3 RMYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCG 182
RM++EGF D VS LSA DV D+++G Q+HG +K + V +AL+DMYGKCG
Sbjct: 66 RMHAEGFLPDATGVSCALSAVGDVGDVSVGEQLHGCAVKAGCRVDACVATALIDMYGKCG 125
Query: 183 CADEMIRVFDTVTTPDVGSCNALLA 257
A E++RVFD + DV SCNAL+A
Sbjct: 126 RAGEIVRVFDESSHMDVASCNALIA 150
>gb|EMS48015.1| hypothetical protein TRIUR3_15376 [Triticum urartu]
Length = 662
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/85 (50%), Positives = 57/85 (67%)
Frame = +3
Query: 3 RMYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCG 182
RM+ EGF D VS LSA DV+++++G Q+HGYV+K VV+AL+DMYGKCG
Sbjct: 144 RMHGEGFLPDATGVSCALSAVGDVKEVSVGEQLHGYVVKAGCRLDQHVVTALIDMYGKCG 203
Query: 183 CADEMIRVFDTVTTPDVGSCNALLA 257
ADE+ VF + DV +CNAL+A
Sbjct: 204 RADEISHVFHESSHMDVATCNALVA 228
>ref|XP_002528570.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532014|gb|EEF33825.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 542
Score = 87.4 bits (215), Expect = 2e-15
Identities = 45/83 (54%), Positives = 56/83 (67%)
Frame = +3
Query: 6 MYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCGC 185
M+ E F+ D S+SS LSA D++ L MG QIHGYVIK L VVSAL+DMYGKC C
Sbjct: 230 MHCEEFKPDGTSISSVLSAVGDLKMLDMGFQIHGYVIKQGLCQDKCVVSALIDMYGKCAC 289
Query: 186 ADEMIRVFDTVTTPDVGSCNALL 254
++ VFD + DVG+CNAL+
Sbjct: 290 TMKISEVFDEMYHMDVGACNALV 312
>ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like isoform X1 [Glycine max]
Length = 748
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/83 (53%), Positives = 54/83 (65%)
Frame = +3
Query: 6 MYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCGC 185
M +GF D +VS L A +ED+ +G Q+HGYVIK L + VVSA+LDMYGKCGC
Sbjct: 231 MLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGC 290
Query: 186 ADEMIRVFDTVTTPDVGSCNALL 254
EM RVFD V ++GS NA L
Sbjct: 291 VKEMSRVFDEVEEMEIGSLNAFL 313
>ref|XP_002301973.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550344115|gb|EEE81246.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 724
Score = 85.1 bits (209), Expect = 9e-15
Identities = 45/83 (54%), Positives = 54/83 (65%)
Frame = +3
Query: 6 MYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCGC 185
M+ EG + D SVSS L A D++ MG QIH YVIK L VVSAL+DMYGKC C
Sbjct: 209 MHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCAC 268
Query: 186 ADEMIRVFDTVTTPDVGSCNALL 254
A EM VF+ + DVG+CNAL+
Sbjct: 269 ASEMSGVFNEMDEVDVGACNALV 291
>ref|XP_006587447.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 601
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/83 (51%), Positives = 52/83 (62%)
Frame = +3
Query: 6 MYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCGC 185
M +GF D +VS L + +ED +G Q+HGYVIK L VVSA+LDMYGKCGC
Sbjct: 84 MLVDGFWPDGSTVSCVLPSVGCLEDAVVGAQVHGYVIKQGLGCDKFVVSAMLDMYGKCGC 143
Query: 186 ADEMIRVFDTVTTPDVGSCNALL 254
EM RVFD V ++GS NA L
Sbjct: 144 VKEMSRVFDEVEEMEIGSLNAFL 166
>gb|ESW24601.1| hypothetical protein PHAVU_004G144300g [Phaseolus vulgaris]
Length = 601
Score = 81.6 bits (200), Expect = 9e-14
Identities = 44/83 (53%), Positives = 51/83 (61%)
Frame = +3
Query: 6 MYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCGC 185
M EGF D +VS L + +ED+ MG Q+HGYV K L VVSALLDMYGKCG
Sbjct: 84 MLLEGFWPDGSTVSCVLPSVGCLEDVVMGAQVHGYVTKQGLICDKFVVSALLDMYGKCGF 143
Query: 186 ADEMIRVFDTVTTPDVGSCNALL 254
EM RVFD V ++GS NA L
Sbjct: 144 VKEMSRVFDEVEEMEIGSLNAFL 166
>ref|XP_006828790.1| hypothetical protein AMTR_s00001p00116120 [Amborella trichopoda]
gi|548833769|gb|ERM96206.1| hypothetical protein
AMTR_s00001p00116120 [Amborella trichopoda]
Length = 414
Score = 80.9 bits (198), Expect = 2e-13
Identities = 44/84 (52%), Positives = 54/84 (64%)
Frame = +3
Query: 6 MYSEGFELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCGC 185
M + G D ++SS L A +++EDL G QIHGY IK L VVSALLDMYG CG
Sbjct: 264 MAANGCGPDGTTISSVLPAIAELEDLVGGRQIHGYTIKLGLGFDVCVVSALLDMYGTCGK 323
Query: 186 ADEMIRVFDTVTTPDVGSCNALLA 257
A EM++ F+ T DVGS NAL+A
Sbjct: 324 AKEMLQAFEDTPTKDVGSFNALVA 347
>gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 80.9 bits (198), Expect = 2e-13
Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +3
Query: 6 MYSEGF-ELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKCG 182
M+ EG D VS LSA DV +++G Q+HGY +K + VV+AL+DMYGKCG
Sbjct: 147 MHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCG 206
Query: 183 CADEMIRVFDTVTTPDVGSCNALLA 257
A E++RVFD + DV SCNAL+A
Sbjct: 207 QAAEVVRVFDESSHMDVASCNALIA 231
>ref|XP_002440983.1| hypothetical protein SORBIDRAFT_09g018390 [Sorghum bicolor]
gi|241946268|gb|EES19413.1| hypothetical protein
SORBIDRAFT_09g018390 [Sorghum bicolor]
Length = 454
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 RMYSEGF-ELDEVSVSSTLSAASDVEDLTMGCQIHGYVIKTRLETKSSVVSALLDMYGKC 179
RM+ EG D VS LSA DV +++G Q+HGY +K + VV+AL+DMYGKC
Sbjct: 146 RMHGEGLLRPDATGVSCALSAVGDVGLVSVGEQLHGYAVKAGCRLDACVVTALIDMYGKC 205
Query: 180 GCADEMIRVFDTVTTPDVGSCNALLA 257
G A E+++VFD + DV SCNAL+A
Sbjct: 206 GRAAEIVQVFDESSHMDVASCNALIA 231