BLASTX nr result
ID: Zingiber23_contig00054643
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00054643
(256 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003610900.1| Pentatricopeptide repeat-containing protein ... 157 1e-36
gb|ESW29011.1| hypothetical protein PHAVU_002G036500g [Phaseolus... 157 2e-36
ref|XP_006590462.1| PREDICTED: pentatricopeptide repeat-containi... 155 4e-36
ref|XP_006372940.1| hypothetical protein POPTR_0017s06420g [Popu... 155 4e-36
ref|XP_006878653.1| hypothetical protein AMTR_s00011p00265800 [A... 155 7e-36
ref|XP_006491807.1| PREDICTED: pentatricopeptide repeat-containi... 154 2e-35
ref|XP_004511471.1| PREDICTED: pentatricopeptide repeat-containi... 154 2e-35
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi... 154 2e-35
gb|EXB97274.1| hypothetical protein L484_024135 [Morus notabilis] 152 4e-35
ref|XP_006347554.1| PREDICTED: pentatricopeptide repeat-containi... 149 5e-34
gb|EPS68102.1| hypothetical protein M569_06665 [Genlisea aurea] 148 6e-34
gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays] 147 1e-33
ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [S... 147 1e-33
emb|CBI26570.3| unnamed protein product [Vitis vinifera] 146 2e-33
ref|XP_004966645.1| PREDICTED: pentatricopeptide repeat-containi... 146 3e-33
gb|EMT04799.1| hypothetical protein F775_19518 [Aegilops tauschii] 144 9e-33
ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containi... 144 1e-32
ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containi... 144 1e-32
ref|XP_006296830.1| hypothetical protein CARUB_v10012815mg [Caps... 144 2e-32
ref|XP_006406650.1| hypothetical protein EUTSA_v10019896mg [Eutr... 143 3e-32
>ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 157 bits (398), Expect = 1e-36
Identities = 73/85 (85%), Positives = 81/85 (95%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
YRHDIFRVA+KDWGADFRKLS G+ALVGLTLWLDHMQDASLQG PESPKSV+LITGTAEY
Sbjct: 1271 YRHDIFRVAQKDWGADFRKLSAGSALVGLTLWLDHMQDASLQGYPESPKSVVLITGTAEY 1330
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSRT 255
N+VSL+ T+KA+LWEMGSPFLP +T
Sbjct: 1331 NMVSLDSTLKAFLWEMGSPFLPCKT 1355
>gb|ESW29011.1| hypothetical protein PHAVU_002G036500g [Phaseolus vulgaris]
Length = 1484
Score = 157 bits (396), Expect = 2e-36
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
YRHDIFRVA+KDWGADFRKLS G+ALVGLTLWLDHMQDASLQG PESPKSV+LITGTAEY
Sbjct: 1253 YRHDIFRVADKDWGADFRKLSAGSALVGLTLWLDHMQDASLQGYPESPKSVVLITGTAEY 1312
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSRT 255
N+VSL+ T+KAYLWEM SPFLP +T
Sbjct: 1313 NMVSLDSTMKAYLWEMASPFLPCKT 1337
>ref|XP_006590462.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1487
Score = 155 bits (393), Expect = 4e-36
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
YRHDIFRVA+KDWGADFRKLS G+ALVGLTLWLDHMQDASLQG PESPKSV+LITGTAEY
Sbjct: 1256 YRHDIFRVADKDWGADFRKLSAGSALVGLTLWLDHMQDASLQGYPESPKSVVLITGTAEY 1315
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSRT 255
N+VSL+ T+KA LWEMGSPFLP +T
Sbjct: 1316 NMVSLDSTLKACLWEMGSPFLPCKT 1340
>ref|XP_006372940.1| hypothetical protein POPTR_0017s06420g [Populus trichocarpa]
gi|566211778|ref|XP_006372941.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
gi|550319588|gb|ERP50737.1| hypothetical protein
POPTR_0017s06420g [Populus trichocarpa]
gi|550319589|gb|ERP50738.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 1465
Score = 155 bits (393), Expect = 4e-36
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
YRHD+FRVA+KDWGADFRKLS GAALVGLTLWLDHMQDASLQG PESPKSV LITGTAEY
Sbjct: 1266 YRHDVFRVADKDWGADFRKLSGGAALVGLTLWLDHMQDASLQGCPESPKSVALITGTAEY 1325
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSRT 255
N+VSL+ T+KA LWEMGSPFLP +T
Sbjct: 1326 NMVSLDSTLKACLWEMGSPFLPCKT 1350
>ref|XP_006878653.1| hypothetical protein AMTR_s00011p00265800 [Amborella trichopoda]
gi|548831996|gb|ERM94798.1| hypothetical protein
AMTR_s00011p00265800 [Amborella trichopoda]
Length = 1522
Score = 155 bits (391), Expect = 7e-36
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
Y HD+FRVAEK+WGADFRKLS GAALVGLTLWLDHMQDASLQG PESPKSV+LITGTAEY
Sbjct: 1305 YPHDVFRVAEKNWGADFRKLSGGAALVGLTLWLDHMQDASLQGLPESPKSVVLITGTAEY 1364
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSRT 255
N VS+ KT+KA+LWEMGSPFLPS+T
Sbjct: 1365 NNVSISKTLKAFLWEMGSPFLPSKT 1389
>ref|XP_006491807.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568877582|ref|XP_006491808.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568877584|ref|XP_006491809.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X3 [Citrus sinensis]
gi|568877586|ref|XP_006491810.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X4 [Citrus sinensis]
gi|568877588|ref|XP_006491811.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X5 [Citrus sinensis]
Length = 1459
Score = 154 bits (388), Expect = 2e-35
Identities = 72/85 (84%), Positives = 78/85 (91%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
Y HD+FRVA+KDWGADFRKLS GAALVGLTLWLDHMQDASLQG PESPKSV+LITGTAEY
Sbjct: 1248 YHHDVFRVADKDWGADFRKLSGGAALVGLTLWLDHMQDASLQGCPESPKSVVLITGTAEY 1307
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSRT 255
N+VSL T+KA LWEMGSPFLP +T
Sbjct: 1308 NMVSLNSTLKACLWEMGSPFLPCKT 1332
>ref|XP_004511471.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X1 [Cicer arietinum]
gi|502159333|ref|XP_004511472.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 1489
Score = 154 bits (388), Expect = 2e-35
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
YRHDIFRVA+KDWGADFRKLS G+ALVGLTLWLDHMQDASLQG PESPKSV+LITGTAEY
Sbjct: 1254 YRHDIFRVAQKDWGADFRKLSAGSALVGLTLWLDHMQDASLQGYPESPKSVVLITGTAEY 1313
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSRT 255
N VSL+ T+KA LWEMGSPFLP +T
Sbjct: 1314 NNVSLDSTLKACLWEMGSPFLPCKT 1338
>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 154 bits (388), Expect = 2e-35
Identities = 71/85 (83%), Positives = 79/85 (92%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
YRHD+FRVAEKDWGADFRK+S G+ALVGLTLWLDHMQDASLQG P SPKSV+LITGTAEY
Sbjct: 1229 YRHDVFRVAEKDWGADFRKMSAGSALVGLTLWLDHMQDASLQGYPLSPKSVVLITGTAEY 1288
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSRT 255
N+VSL T+KA+LWEMGSPFLP +T
Sbjct: 1289 NMVSLNSTLKAFLWEMGSPFLPCKT 1313
>gb|EXB97274.1| hypothetical protein L484_024135 [Morus notabilis]
Length = 1494
Score = 152 bits (384), Expect = 4e-35
Identities = 71/85 (83%), Positives = 78/85 (91%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
YRHD+FRVA+KDWGADFRKLS G+ALVGLTLWLDHMQDASLQG PESPKSV+LITGT+EY
Sbjct: 1271 YRHDLFRVADKDWGADFRKLSAGSALVGLTLWLDHMQDASLQGYPESPKSVVLITGTSEY 1330
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSRT 255
N +SL T+KA LWEMGSPFLP RT
Sbjct: 1331 NSISLNSTLKACLWEMGSPFLPCRT 1355
>ref|XP_006347554.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 1476
Score = 149 bits (375), Expect = 5e-34
Identities = 70/85 (82%), Positives = 77/85 (90%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
Y +DIFRVA+KDWGADFRKLS GAALVGLTLWLDHMQDASL+G PESPKSV+LITG ++Y
Sbjct: 1266 YHNDIFRVADKDWGADFRKLSAGAALVGLTLWLDHMQDASLEGFPESPKSVVLITGKSDY 1325
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSRT 255
N VSL TVKAYLWEMGSPFLP +T
Sbjct: 1326 NRVSLNSTVKAYLWEMGSPFLPCKT 1350
>gb|EPS68102.1| hypothetical protein M569_06665 [Genlisea aurea]
Length = 1418
Score = 148 bits (374), Expect = 6e-34
Identities = 70/85 (82%), Positives = 75/85 (88%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
Y H +FRVAEKDWGADFRKLS GAAL GLTLWLDHMQDASLQG PESPKSV+LITG AEY
Sbjct: 1206 YNHHVFRVAEKDWGADFRKLSAGAALTGLTLWLDHMQDASLQGFPESPKSVVLITGAAEY 1265
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSRT 255
N VSL T+KA+LWEMGSPFLP +T
Sbjct: 1266 NGVSLNSTLKAFLWEMGSPFLPCKT 1290
>gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 147 bits (372), Expect = 1e-33
Identities = 69/84 (82%), Positives = 77/84 (91%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
YR ++FRVA+KDWGADFRKLS GAALVGLTLWLDHMQDASLQGSPESPKSV+L+TG EY
Sbjct: 1227 YRDNVFRVAQKDWGADFRKLSAGAALVGLTLWLDHMQDASLQGSPESPKSVVLVTGEGEY 1286
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSR 252
N+VSL KT++AYL EMGSPFLP R
Sbjct: 1287 NMVSLRKTIRAYLLEMGSPFLPCR 1310
>ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein
SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 147 bits (372), Expect = 1e-33
Identities = 69/84 (82%), Positives = 77/84 (91%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
YR ++FRVA+KDWGADFRKLS GAALVGLTLWLDHMQDASLQGSPESPKSV+L+TG EY
Sbjct: 1227 YRDNVFRVAQKDWGADFRKLSAGAALVGLTLWLDHMQDASLQGSPESPKSVVLVTGEGEY 1286
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSR 252
N+VSL KT++AYL EMGSPFLP R
Sbjct: 1287 NMVSLRKTIRAYLLEMGSPFLPCR 1310
>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 146 bits (369), Expect = 2e-33
Identities = 71/93 (76%), Positives = 79/93 (84%), Gaps = 8/93 (8%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQ--------DASLQGSPESPKSVL 156
YRHD+FRVAEKDWGADFRK+S G+ALVGLTLWLDHMQ DASLQG P SPKSV+
Sbjct: 811 YRHDVFRVAEKDWGADFRKMSAGSALVGLTLWLDHMQAKYFYFWQDASLQGYPLSPKSVV 870
Query: 157 LITGTAEYNLVSLEKTVKAYLWEMGSPFLPSRT 255
LITGTAEYN+VSL T+KA+LWEMGSPFLP +T
Sbjct: 871 LITGTAEYNMVSLNSTLKAFLWEMGSPFLPCKT 903
>ref|XP_004966645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Setaria italica]
Length = 1410
Score = 146 bits (368), Expect = 3e-33
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
YR ++FRV EKDWGADFRKLS GAALVGLTLWLDHMQDASLQGSPESPKS++++TG EY
Sbjct: 1194 YRDNVFRVVEKDWGADFRKLSAGAALVGLTLWLDHMQDASLQGSPESPKSIVMVTGEGEY 1253
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSR 252
N+VSL KT++AYL EMGSPFLP R
Sbjct: 1254 NMVSLRKTIRAYLLEMGSPFLPCR 1277
>gb|EMT04799.1| hypothetical protein F775_19518 [Aegilops tauschii]
Length = 1216
Score = 144 bits (364), Expect = 9e-33
Identities = 68/84 (80%), Positives = 74/84 (88%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
YRH IFRV EKDWGADFRKLS GAALV LTLWLD MQDASLQGSPESPKS++L+TG EY
Sbjct: 1002 YRHSIFRVIEKDWGADFRKLSAGAALVALTLWLDQMQDASLQGSPESPKSIVLVTGEGEY 1061
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSR 252
N+VSL KT++AYL EMGSPFLP R
Sbjct: 1062 NMVSLRKTIRAYLLEMGSPFLPCR 1085
>ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1496
Score = 144 bits (363), Expect = 1e-32
Identities = 66/85 (77%), Positives = 76/85 (89%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
Y HD+FRVA+KDWGADFRKLS G+ALVGLTLWLD MQDASL+G PESPKSV+LITGT+EY
Sbjct: 1271 YNHDVFRVADKDWGADFRKLSAGSALVGLTLWLDQMQDASLEGFPESPKSVVLITGTSEY 1330
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSRT 255
N+VSL T+K LWE+GSPFLP +T
Sbjct: 1331 NMVSLNSTLKTCLWEIGSPFLPCKT 1355
>ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 144 bits (363), Expect = 1e-32
Identities = 66/85 (77%), Positives = 75/85 (88%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
YRH++FRV EKDWGADFRKLS GAAL LTLWLD MQDASLQGSPESPKS++L+TG EY
Sbjct: 1071 YRHNVFRVVEKDWGADFRKLSAGAALTALTLWLDQMQDASLQGSPESPKSIVLVTGEGEY 1130
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSRT 255
N+VSL KT++AYL EMGSPFLP +T
Sbjct: 1131 NMVSLRKTIRAYLLEMGSPFLPCKT 1155
>ref|XP_006296830.1| hypothetical protein CARUB_v10012815mg [Capsella rubella]
gi|482565539|gb|EOA29728.1| hypothetical protein
CARUB_v10012815mg [Capsella rubella]
Length = 1448
Score = 144 bits (362), Expect = 2e-32
Identities = 67/85 (78%), Positives = 77/85 (90%)
Frame = +1
Query: 1 YRHDIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEY 180
+ D+FRVA+KDWGADFR+LS GAALV LTLWLDHMQDASL+G PESPKSV+LITGTAEY
Sbjct: 1242 FSRDVFRVADKDWGADFRRLSGGAALVALTLWLDHMQDASLEGYPESPKSVVLITGTAEY 1301
Query: 181 NLVSLEKTVKAYLWEMGSPFLPSRT 255
N +SL+KT+KA LWEMGSPFLP +T
Sbjct: 1302 NGISLDKTLKACLWEMGSPFLPCKT 1326
>ref|XP_006406650.1| hypothetical protein EUTSA_v10019896mg [Eutrema salsugineum]
gi|557107796|gb|ESQ48103.1| hypothetical protein
EUTSA_v10019896mg [Eutrema salsugineum]
Length = 1455
Score = 143 bits (360), Expect = 3e-32
Identities = 67/82 (81%), Positives = 76/82 (92%)
Frame = +1
Query: 10 DIFRVAEKDWGADFRKLSPGAALVGLTLWLDHMQDASLQGSPESPKSVLLITGTAEYNLV 189
D+FRVA+KDWGADFR+LS GAALV LTLWLDHMQDASL+G PESPKSV+LITGTAEYN +
Sbjct: 1252 DVFRVADKDWGADFRRLSGGAALVALTLWLDHMQDASLEGYPESPKSVVLITGTAEYNGI 1311
Query: 190 SLEKTVKAYLWEMGSPFLPSRT 255
SL+KT+KA LWEMGSPFLP +T
Sbjct: 1312 SLDKTLKACLWEMGSPFLPCKT 1333