BLASTX nr result
ID: Zingiber23_contig00053576
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber23_contig00053576 (369 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi... 73 3e-11 ref|XP_002510452.1| pentatricopeptide repeat-containing protein,... 70 3e-10 ref|XP_004243456.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09 ref|XP_004237632.1| PREDICTED: pentatricopeptide repeat-containi... 66 5e-09 ref|XP_006357349.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09 ref|XP_006851319.1| hypothetical protein AMTR_s00050p00185440 [A... 65 7e-09 gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis] 64 2e-08 ref|XP_006376183.1| hypothetical protein POPTR_0013s10600g [Popu... 64 2e-08 gb|EOY03311.1| Pentatricopeptide repeat (PPR-like) superfamily p... 64 3e-08 ref|XP_006596427.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08 ref|XP_006575412.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08 emb|CBI22025.3| unnamed protein product [Vitis vinifera] 63 4e-08 ref|XP_001754449.1| predicted protein [Physcomitrella patens] gi... 63 4e-08 ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08 ref|XP_006479936.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08 ref|XP_006444301.1| hypothetical protein CICLE_v10024503mg [Citr... 63 5e-08 gb|EOY14874.1| Pentatricopeptide repeat (PPR-like) superfamily p... 63 5e-08 gb|ESW14194.1| hypothetical protein PHAVU_008G260600g [Phaseolus... 62 6e-08 gb|EOY08235.1| Pentatricopeptide repeat superfamily protein [The... 62 6e-08 ref|XP_006301077.1| hypothetical protein CARUB_v10021470mg [Caps... 62 6e-08 >ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic-like [Vitis vinifera] Length = 725 Score = 73.2 bits (178), Expect = 3e-11 Identities = 37/92 (40%), Positives = 55/92 (59%) Frame = +3 Query: 78 AIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHAHM 257 AI DIQ A G+LK+A+ L G PV P F S+LR C ++ SL G+Q+H H+ Sbjct: 118 AIFSDIQRFARQGKLKEALTILDYCDQQGIPVNPTTFSSLLRACVESKSLTHGKQIHVHI 177 Query: 258 VVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 353 + + + F+ L+++Y CGSL+D+R VF Sbjct: 178 RINGLENNEFLRTKLVHMYTSCGSLEDARGVF 209 >ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223551153|gb|EEF52639.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 1218 Score = 70.1 bits (170), Expect = 3e-10 Identities = 34/89 (38%), Positives = 57/89 (64%) Frame = +3 Query: 102 LASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHAHMVVTCFDQD 281 L GRL +A+ +L L G V P+ F+S+L+ C D +S+ +GR++HAH + +++ Sbjct: 49 LCKKGRLNEAVSALELIAQHGSKVSPKTFISLLQSCIDCNSVTLGRKVHAHFHLV-QEKN 107 Query: 282 PFVCNHLINVYGKCGSLDDSRWVFRRLGE 368 PF+ L+++Y KCGSL D+R +F + E Sbjct: 108 PFLETKLVSMYAKCGSLSDARKLFGEMRE 136 >ref|XP_004243456.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic-like [Solanum lycopersicum] Length = 674 Score = 67.0 bits (162), Expect = 2e-09 Identities = 31/95 (32%), Positives = 54/95 (56%) Frame = +3 Query: 78 AIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHAHM 257 AI +DIQ A +LK+A+ L H G PV P F S++ C SL + +H H+ Sbjct: 67 AIYKDIQRFAHQNKLKEALTILDYLDHRGIPVNPTTFASLIAACVRLKSLTSAKIVHTHV 126 Query: 258 VVTCFDQDPFVCNHLINVYGKCGSLDDSRWVFRRL 362 ++ + + F+ ++N+Y CGS++D++ VF ++ Sbjct: 127 IINGLENNEFLQTKVVNMYAACGSIEDAKKVFDKM 161 >ref|XP_004237632.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like [Solanum lycopersicum] Length = 914 Score = 65.9 bits (159), Expect = 5e-09 Identities = 36/92 (39%), Positives = 48/92 (52%) Frame = +3 Query: 93 IQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHAHMVVTCF 272 I + G KDAI + LG F S+L+ C+ L +G+QLH +VVT F Sbjct: 110 ISGYSQNGFGKDAIWGFLKMHSLGLRCNEFTFPSVLKACSTEKELCLGKQLHGVVVVTGF 169 Query: 273 DQDPFVCNHLINVYGKCGSLDDSRWVFRRLGE 368 D D FV N L+ +Y KCG DSR +F + E Sbjct: 170 DSDVFVANTLVVMYAKCGEFVDSRMLFEEIPE 201 >ref|XP_006357349.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X1 [Solanum tuberosum] gi|565382025|ref|XP_006357350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X2 [Solanum tuberosum] gi|565382027|ref|XP_006357351.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like isoform X3 [Solanum tuberosum] Length = 918 Score = 65.5 bits (158), Expect = 7e-09 Identities = 36/92 (39%), Positives = 48/92 (52%) Frame = +3 Query: 93 IQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHAHMVVTCF 272 I + G KDAI + LG F S+L+ C+ L +G+QLH +VVT F Sbjct: 114 ISGYSQNGFGKDAIWGFLKMHSLGLRCNEFTFPSVLKACSIEKELFLGKQLHGVVVVTGF 173 Query: 273 DQDPFVCNHLINVYGKCGSLDDSRWVFRRLGE 368 D D FV N L+ +Y KCG DSR +F + E Sbjct: 174 DSDVFVANTLVVMYAKCGEFVDSRMLFEEIPE 205 >ref|XP_006851319.1| hypothetical protein AMTR_s00050p00185440 [Amborella trichopoda] gi|548855008|gb|ERN12900.1| hypothetical protein AMTR_s00050p00185440 [Amborella trichopoda] Length = 345 Score = 65.5 bits (158), Expect = 7e-09 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 5/97 (5%) Frame = +3 Query: 90 DIQSLASAGRLKDAIRSLILRRHLGRPVY-----PECFVSILRRCADADSLLIGRQLHAH 254 D +L S G+LK+A+ + + ++ P F +L+ C S+ +G+QLH+ Sbjct: 35 DFITLCSEGQLKEALSKFQPKTGSDQTIFSLQKNPTSFSLLLQGCVPLQSIALGKQLHSI 94 Query: 255 MVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVFRRLG 365 +V D F+CNHL+N+Y KC SLD + VF R+G Sbjct: 95 IVTGGLSSDRFLCNHLLNMYTKCQSLDFALQVFERMG 131 >gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis] Length = 880 Score = 63.9 bits (154), Expect = 2e-08 Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 5/122 (4%) Frame = +3 Query: 18 PAITRIFSTSAS---PQASIKALAIPQDIQSLASAGRLKDAIRSL--ILRRHLGRPVYPE 182 P + I T A P ++ + L GRL DA+ +L I R + P Sbjct: 13 PPVLPIIPTKAGIIQPSEFSTTISFDSHLDKLCRDGRLSDAVAALDAIAERGSKVKLKPR 72 Query: 183 CFVSILRRCADADSLLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVFRRL 362 ++++L+ C D +S+ +GR+LHA M+ +PFV L+++Y KCG L D+R VF + Sbjct: 73 TYMNLLQSCIDTNSIELGRKLHARMMGLVQYVNPFVETKLVSMYAKCGCLHDARRVFDGM 132 Query: 363 GE 368 E Sbjct: 133 RE 134 >ref|XP_006376183.1| hypothetical protein POPTR_0013s10600g [Populus trichocarpa] gi|550325453|gb|ERP53980.1| hypothetical protein POPTR_0013s10600g [Populus trichocarpa] Length = 636 Score = 63.9 bits (154), Expect = 2e-08 Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 5/122 (4%) Frame = +3 Query: 15 WPAITRIFSTSASPQ---ASIKALAIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPEC 185 W R FS+S PQ ++ +A + ++ L++ G +K+A+ L + + Sbjct: 9 WYLFLRSFSSSIHPQLPNSTPEATDLFNKVRVLSTRGNIKEALSFFYSTPQLNQS--QQT 66 Query: 186 FVSILRRCADADSLLIGRQLHAHMVVTCFD--QDPFVCNHLINVYGKCGSLDDSRWVFRR 359 + ++ CA +L G+ LH HM+ QD FV NHLIN+Y KCG LD +R VF Sbjct: 67 YATLFHACARHGNLKQGQYLHQHMISENHKNPQDLFVTNHLINMYAKCGDLDRARQVFDE 126 Query: 360 LG 365 +G Sbjct: 127 MG 128 >gb|EOY03311.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma cacao] Length = 683 Score = 63.5 bits (153), Expect = 3e-08 Identities = 35/92 (38%), Positives = 51/92 (55%) Frame = +3 Query: 78 AIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHAHM 257 AI +DIQ A +LK+A+ L G PV P F S+L C + SL GRQ+H+H+ Sbjct: 76 AIYKDIQRFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLAACVRSKSLADGRQIHSHI 135 Query: 258 VVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 353 + + F+ L ++Y CGS+DD+ VF Sbjct: 136 RTNGLENNEFLRAKLAHMYTSCGSIDDALRVF 167 >ref|XP_006596427.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Glycine max] Length = 896 Score = 63.2 bits (152), Expect = 4e-08 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%) Frame = +3 Query: 15 WPAITRIFSTSASPQASIKA--LAIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECF 188 W TR + S S + ++ + + L + G L +A+ L G V P F Sbjct: 28 WHGSTRALANSNSVSMTQRSHPKLVDTQLNQLCANGSLSEAVAILDSLAQQGSKVRPITF 87 Query: 189 VSILRRCADADSLLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVFRRLGE 368 +++L+ C D D +L+GR+LH + + +PFV L+++Y KCG LD++R VF + E Sbjct: 88 MNLLQACIDKDCILVGRELHTRIGLV-RKVNPFVETKLVSMYAKCGHLDEARKVFDEMRE 146 >ref|XP_006575412.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like isoform X1 [Glycine max] gi|571441335|ref|XP_006575413.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like isoform X2 [Glycine max] Length = 896 Score = 63.2 bits (152), Expect = 4e-08 Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Frame = +3 Query: 15 WPAITRIFSTSASPQASIKA--LAIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECF 188 W TR+ + S S + ++ I + L + G L +A+ L G V P F Sbjct: 28 WHGSTRVLANSNSVSITQRSNPKLIDTQLNQLCANGPLSEAVAILDSLAQQGSKVRPITF 87 Query: 189 VSILRRCADADSLLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVFRRLGE 368 +++L+ C D D +L+GR+LHA + + +PFV L+++Y KCG LD++ VF + E Sbjct: 88 MNLLQACIDKDCILVGRELHARIGLV-GKVNPFVETKLVSMYAKCGHLDEAWKVFDEMRE 146 >emb|CBI22025.3| unnamed protein product [Vitis vinifera] Length = 489 Score = 63.2 bits (152), Expect = 4e-08 Identities = 38/115 (33%), Positives = 58/115 (50%) Frame = +3 Query: 9 CRWPAITRIFSTSASPQASIKALAIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECF 188 C P R FST+ S + + A + +L S G LK A H+ P F Sbjct: 5 CLRPLTRRHFSTNPSSGSELTA-----EFTNLCSKGHLKQAFDRF--SSHIWSE--PSLF 55 Query: 189 VSILRRCADADSLLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 353 +L+ C +SL +G+QLH+ ++ + D F+ NHL+N+Y KCG LD + +F Sbjct: 56 SHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLF 110 >ref|XP_001754449.1| predicted protein [Physcomitrella patens] gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens] Length = 723 Score = 63.2 bits (152), Expect = 4e-08 Identities = 34/96 (35%), Positives = 56/96 (58%) Frame = +3 Query: 66 IKALAIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQL 245 ++ LA +D+ L GRLK+A+ + G VY + F +L+ CA SL GR++ Sbjct: 10 VETLANSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREV 69 Query: 246 HAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 353 HA ++ + + ++ N L+++Y KCGSL D+R VF Sbjct: 70 HAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVF 105 >ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080 [Vitis vinifera] Length = 657 Score = 63.2 bits (152), Expect = 4e-08 Identities = 38/115 (33%), Positives = 58/115 (50%) Frame = +3 Query: 9 CRWPAITRIFSTSASPQASIKALAIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECF 188 C P R FST+ S + + A + +L S G LK A H+ P F Sbjct: 5 CLRPLTRRHFSTNPSSGSELTA-----EFTNLCSKGHLKQAFDRF--SSHIWSE--PSLF 55 Query: 189 VSILRRCADADSLLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 353 +L+ C +SL +G+QLH+ ++ + D F+ NHL+N+Y KCG LD + +F Sbjct: 56 SHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLF 110 >ref|XP_006479936.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090-like isoform X1 [Citrus sinensis] Length = 605 Score = 62.8 bits (151), Expect = 5e-08 Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 1/93 (1%) Frame = +3 Query: 87 QDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHAHMVVT 266 Q SL S G+L +AI SL L G + E IL++CA++ SL +G+++H H+ +T Sbjct: 22 QSFLSLISKGQLSEAISSLDLLAQRGIRLPAETLAFILQQCAESKSLKLGKRVHLHLKLT 81 Query: 267 -CFDQDPFVCNHLINVYGKCGSLDDSRWVFRRL 362 F+ NHLI++Y KCGS D+R VF ++ Sbjct: 82 QRKTPTTFLSNHLISMYFKCGSDVDARKVFDKI 114 >ref|XP_006444301.1| hypothetical protein CICLE_v10024503mg [Citrus clementina] gi|557546563|gb|ESR57541.1| hypothetical protein CICLE_v10024503mg [Citrus clementina] Length = 595 Score = 62.8 bits (151), Expect = 5e-08 Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 1/93 (1%) Frame = +3 Query: 87 QDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHAHMVVT 266 Q SL S G+L +AI SL L G + E IL++CA++ SL +G+++H H+ +T Sbjct: 23 QSFLSLISKGQLSEAISSLDLLAQRGIRLPAETLAFILQQCAESKSLKLGKRVHLHLKLT 82 Query: 267 -CFDQDPFVCNHLINVYGKCGSLDDSRWVFRRL 362 F+ NHLI++Y KCGS D+R VF ++ Sbjct: 83 QRKTPTTFLSNHLISMYFKCGSDVDARKVFDKI 115 >gb|EOY14874.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1 [Theobroma cacao] gi|508722978|gb|EOY14875.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1 [Theobroma cacao] Length = 890 Score = 62.8 bits (151), Expect = 5e-08 Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 2/91 (2%) Frame = +3 Query: 102 LASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHA--HMVVTCFD 275 L+ GRL +AI +L G V F+++L+ C D SL +GR+LHA H+V + Sbjct: 54 LSRNGRLTEAITALDSIAQSGSQVRANTFINLLQACIDFGSLELGRKLHARVHLVK---E 110 Query: 276 QDPFVCNHLINVYGKCGSLDDSRWVFRRLGE 368 DPFV L+++Y KCGS D+R VF ++ E Sbjct: 111 SDPFVETKLVSMYAKCGSFVDARKVFDKMKE 141 >gb|ESW14194.1| hypothetical protein PHAVU_008G260600g [Phaseolus vulgaris] Length = 893 Score = 62.4 bits (150), Expect = 6e-08 Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 4/122 (3%) Frame = +3 Query: 15 WPAITRIFSTSASPQASIKALAIPQ----DIQSLASAGRLKDAIRSLILRRHLGRPVYPE 182 W TR+ + S S S+ L+ P+ + L G L +A+ L G V P Sbjct: 28 WQGSTRVLANSNS--VSMTNLSHPKLIDTQLNELCVNGHLSEAVGILDSLAQQGSKVRPI 85 Query: 183 CFVSILRRCADADSLLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVFRRL 362 F+++L+ C D D + +GR+LHA V +PFV L+++Y KCG L+++R VF + Sbjct: 86 TFINLLQACIDRDCIWVGRELHAR-VGLVRKVNPFVETKLVSMYAKCGLLEEARKVFDEM 144 Query: 363 GE 368 E Sbjct: 145 HE 146 >gb|EOY08235.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao] Length = 693 Score = 62.4 bits (150), Expect = 6e-08 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 10/121 (8%) Frame = +3 Query: 21 AITRIFSTSASPQASIKALAIPQDIQSLASAG----------RLKDAIRSLILRRHLGRP 170 A+T ++S +++ I + +++ S R++DA+ + + G Sbjct: 259 ALTDMYSKVEDMDSALNVFGIDSECRNVVSCSSLIDGYVEMDRVEDALSVFVELQRRGIE 318 Query: 171 VYPECFVSILRRCADADSLLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWV 350 F S+++ CA SL G QLHA ++ FD +PFV + L+++YGKCG LDDS V Sbjct: 319 SNEFTFSSLIKACASQASLEQGAQLHAQVIKFNFDGNPFVSSGLVDMYGKCGLLDDSIQV 378 Query: 351 F 353 F Sbjct: 379 F 379 >ref|XP_006301077.1| hypothetical protein CARUB_v10021470mg [Capsella rubella] gi|482569787|gb|EOA33975.1| hypothetical protein CARUB_v10021470mg [Capsella rubella] Length = 688 Score = 62.4 bits (150), Expect = 6e-08 Identities = 34/103 (33%), Positives = 55/103 (53%) Frame = +3 Query: 45 SASPQASIKALAIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADS 224 S+ P S +I +DIQS A L+DA+ L G PV F ++L C S Sbjct: 66 SSLPLHSKNPCSIHRDIQSFARKNNLEDALTILDYLEQRGIPVNATTFSALLAACVRRKS 125 Query: 225 LLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 353 L+ G+Q+H H+ + + + F+ L+++Y CGS+ D++ VF Sbjct: 126 LIHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 168