BLASTX nr result
ID: Zingiber23_contig00053463
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00053463
(373 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001078414.1| pentatricopeptide repeat-containing protein ... 63 5e-08
ref|NP_001078415.1| pentatricopeptide repeat-containing protein ... 63 5e-08
gb|EMJ12183.1| hypothetical protein PRUPE_ppa021532mg [Prunus pe... 52 5e-08
ref|XP_002513610.1| pentatricopeptide repeat-containing protein,... 49 7e-08
ref|XP_006829281.1| hypothetical protein AMTR_s00001p00272900 [A... 62 8e-08
ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containi... 57 9e-08
ref|XP_006580405.1| PREDICTED: pentatricopeptide repeat-containi... 57 9e-08
gb|ESW32564.1| hypothetical protein PHAVU_002G332900g [Phaseolus... 62 1e-07
gb|EMJ05367.1| hypothetical protein PRUPE_ppa017537mg [Prunus pe... 58 1e-07
ref|XP_006585975.1| PREDICTED: pentatricopeptide repeat-containi... 61 2e-07
ref|XP_002978636.1| hypothetical protein SELMODRAFT_109283 [Sela... 61 2e-07
ref|XP_002984574.1| hypothetical protein SELMODRAFT_120669 [Sela... 61 2e-07
gb|EXC37464.1| hypothetical protein L484_000761 [Morus notabilis] 49 2e-07
ref|XP_002865191.1| pentatricopeptide repeat-containing protein ... 52 2e-07
gb|EXB72481.1| hypothetical protein L484_011483 [Morus notabilis] 49 2e-07
ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Sela... 60 2e-07
gb|EXB52480.1| hypothetical protein L484_000681 [Morus notabilis] 54 3e-07
gb|AAL73981.1|AF466201_10 putative vegetative storage protein [S... 55 3e-07
ref|XP_004304914.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-07
ref|NP_199458.1| pentatricopeptide repeat-containing protein [Ar... 51 3e-07
>ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g21065 gi|332658994|gb|AEE84394.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 16/89 (17%)
Frame = -1
Query: 349 QIQILHFTI*RMRRKNGVMYHSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL- 173
QI ++ + ++N V+YHSEK AIA + +R P VV+NLR+C CH A KL+
Sbjct: 507 QISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVS 566
Query: 172 ---------------HHFENEICSCNDKW 131
HHF+N CSC D W
Sbjct: 567 KVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 16/89 (17%)
Frame = -1
Query: 349 QIQILHFTI*RMRRKNGVMYHSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL- 173
QI ++ + ++N V+YHSEK AIA + +R P VV+NLR+C CH A KL+
Sbjct: 374 QISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVS 433
Query: 172 ---------------HHFENEICSCNDKW 131
HHF+N CSC D W
Sbjct: 434 KVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
>gb|EMJ12183.1| hypothetical protein PRUPE_ppa021532mg [Prunus persica]
Length = 840
Score = 52.4 bits (124), Expect(2) = 5e-08
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 16/69 (23%)
Frame = -1
Query: 289 HSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL----------------HHFEN 158
HSEK AI+ G+ + + + +NLRIC+ CH AAKL+ HHF++
Sbjct: 772 HSEKLAISFGLLKMSKGATLRICKNLRICVDCHNAAKLISKVVEREIVVRDNKRFHHFKH 831
Query: 157 EICSCNDKW 131
+CSC D W
Sbjct: 832 GLCSCGDYW 840
Score = 30.0 bits (66), Expect(2) = 5e-08
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -3
Query: 371 LRELGYQSNTDSALHHIEDEKEK 303
+ + GY+ NT S LH +E+E+EK
Sbjct: 743 ISKFGYRPNTGSVLHELEEEEEK 765
>ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547518|gb|EEF49013.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 660
Score = 49.3 bits (116), Expect(2) = 7e-08
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 16/69 (23%)
Frame = -1
Query: 289 HSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL----------------HHFEN 158
HSEK A+A I P V +NLR+C CH AAKL+ HHF+
Sbjct: 592 HSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQE 651
Query: 157 EICSCNDKW 131
CSC D W
Sbjct: 652 GCCSCGDYW 660
Score = 32.7 bits (73), Expect(2) = 7e-08
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = -3
Query: 371 LRELGYQSNTDSALHHIEDEKEKW 300
++ELGY TDSALH +E+E +++
Sbjct: 564 MKELGYMPETDSALHDVEEEDKEY 587
>ref|XP_006829281.1| hypothetical protein AMTR_s00001p00272900 [Amborella trichopoda]
gi|548834260|gb|ERM96697.1| hypothetical protein
AMTR_s00001p00272900 [Amborella trichopoda]
Length = 762
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 16/76 (21%)
Frame = -1
Query: 310 RKNGVMYHSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL-------------- 173
+++ V +HSEK A+A GI V + +P V++NLR+C+ CH A KL+
Sbjct: 687 KEHMVKHHSEKLAVAFGILNVPEGRPIRVIKNLRVCVDCHNAIKLVSEIMGRAVILRDSN 746
Query: 172 --HHFENEICSCNDKW 131
HHFE +CSC D W
Sbjct: 747 RFHHFEGGLCSCGDYW 762
>ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Glycine max]
Length = 750
Score = 57.0 bits (136), Expect(2) = 9e-08
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 16/76 (21%)
Frame = -1
Query: 310 RKNGVMYHSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL-------------- 173
+K+ + YHSEK A+A GI + KP V++NLR+C CH A K +
Sbjct: 675 KKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSH 734
Query: 172 --HHFENEICSCNDKW 131
HHF ICSC D W
Sbjct: 735 RYHHFSEGICSCRDYW 750
Score = 24.6 bits (52), Expect(2) = 9e-08
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -3
Query: 371 LRELGYQSNTDSALHHIEDEKEK 303
++ GY S+T LH +E+E++K
Sbjct: 654 MKHEGYVSSTKLVLHDVEEEEKK 676
>ref|XP_006580405.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X2 [Glycine max]
Length = 718
Score = 57.0 bits (136), Expect(2) = 9e-08
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 16/76 (21%)
Frame = -1
Query: 310 RKNGVMYHSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL-------------- 173
+K+ + YHSEK A+A GI + KP V++NLR+C CH A K +
Sbjct: 643 KKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSH 702
Query: 172 --HHFENEICSCNDKW 131
HHF ICSC D W
Sbjct: 703 RYHHFSEGICSCRDYW 718
Score = 24.6 bits (52), Expect(2) = 9e-08
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -3
Query: 371 LRELGYQSNTDSALHHIEDEKEK 303
++ GY S+T LH +E+E++K
Sbjct: 622 MKHEGYVSSTKLVLHDVEEEEKK 644
>gb|ESW32564.1| hypothetical protein PHAVU_002G332900g [Phaseolus vulgaris]
Length = 779
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/72 (43%), Positives = 37/72 (51%), Gaps = 16/72 (22%)
Frame = -1
Query: 298 VMYHSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL----------------HH 167
++YHSEK AIA GI P V +NLRIC+ CH A K + HH
Sbjct: 708 LLYHSEKIAIAFGILNTRPSNPILVTKNLRICVDCHNAVKFMTLITERKITVRDASRFHH 767
Query: 166 FENEICSCNDKW 131
FEN IC+C D W
Sbjct: 768 FENGICNCRDFW 779
>gb|EMJ05367.1| hypothetical protein PRUPE_ppa017537mg [Prunus persica]
Length = 631
Score = 57.8 bits (138), Expect(2) = 1e-07
Identities = 31/70 (44%), Positives = 38/70 (54%), Gaps = 16/70 (22%)
Frame = -1
Query: 292 YHSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL----------------HHFE 161
YHSEK AIA G+ V Q P V++NLRIC CH A KL+ HHF+
Sbjct: 562 YHSEKLAIAYGLLKVPQGMPIRVMKNLRICGDCHSAIKLISKVMGREVILRDANRFHHFK 621
Query: 160 NEICSCNDKW 131
+ +CSC D W
Sbjct: 622 DGLCSCRDYW 631
Score = 23.5 bits (49), Expect(2) = 1e-07
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 371 LRELGYQSNTDSALHHIEDEKEKWS 297
LRE GY + LH +E+E++ S
Sbjct: 535 LREAGYCPDASFVLHDLEEEEKAHS 559
>ref|XP_006585975.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16610-like isoform X1 [Glycine max]
gi|571473624|ref|XP_006585976.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g16610-like isoform X2 [Glycine max]
Length = 783
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/72 (43%), Positives = 37/72 (51%), Gaps = 16/72 (22%)
Frame = -1
Query: 298 VMYHSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL----------------HH 167
++YHSEK AIA GI P V +NLRIC+ CH A K + HH
Sbjct: 712 LLYHSEKIAIAFGILNTSPSNPILVTKNLRICVDCHTAVKFMTLITKREITVRDASRFHH 771
Query: 166 FENEICSCNDKW 131
FEN IC+C D W
Sbjct: 772 FENGICNCQDFW 783
>ref|XP_002978636.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
gi|300153445|gb|EFJ20083.1| hypothetical protein
SELMODRAFT_109283 [Selaginella moellendorffii]
Length = 438
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 16/72 (22%)
Frame = -1
Query: 298 VMYHSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL----------------HH 167
+++HSEK A+A G+ P V++NLR+C CH+AAKL+ HH
Sbjct: 367 LLWHSEKLAVAFGLLNTPAGSPIRVIKNLRVCKDCHDAAKLISAIEQRRIVFRDLSRFHH 426
Query: 166 FENEICSCNDKW 131
FEN +CSC D W
Sbjct: 427 FENGVCSCGDYW 438
>ref|XP_002984574.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
gi|300147556|gb|EFJ14219.1| hypothetical protein
SELMODRAFT_120669 [Selaginella moellendorffii]
Length = 369
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 16/72 (22%)
Frame = -1
Query: 298 VMYHSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL----------------HH 167
+++HSEK A+A G+ P V++NLR+C CH+AAKL+ HH
Sbjct: 298 LLWHSEKLAVAFGLLNTPAGSPIRVIKNLRVCKDCHDAAKLISAIEQRRIVFRDLSRFHH 357
Query: 166 FENEICSCNDKW 131
FEN +CSC D W
Sbjct: 358 FENGVCSCGDYW 369
>gb|EXC37464.1| hypothetical protein L484_000761 [Morus notabilis]
Length = 815
Score = 49.3 bits (116), Expect(2) = 2e-07
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 16/69 (23%)
Frame = -1
Query: 289 HSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL----------------HHFEN 158
HSEK AI + P + +NLR+C CH A KL+ HHF+N
Sbjct: 610 HSEKLAIVFALLNSEPGAPIRITKNLRVCGDCHTAVKLISKIAEREIVVRDTYRFHHFKN 669
Query: 157 EICSCNDKW 131
ICSC D W
Sbjct: 670 GICSCADNW 678
Score = 31.2 bits (69), Expect(2) = 2e-07
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3
Query: 371 LRELGYQSNTDSALHHIEDEKEK 303
++ELGY TDSALH +E+E ++
Sbjct: 582 MKELGYVPETDSALHDVEEEDKE 604
>ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297311026|gb|EFH41450.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 697
Score = 51.6 bits (122), Expect(2) = 2e-07
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 16/77 (20%)
Frame = -1
Query: 313 RRKNGVMYHSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL------------- 173
+++ + YHSE+ AIA G+ + V++NLR+C CH KL+
Sbjct: 621 QKEEMLWYHSERLAIAFGLINTVEGSTVTVMKNLRVCEDCHTVIKLISRVVGCKIVLRDP 680
Query: 172 ---HHFENEICSCNDKW 131
HHF+N +CSC D W
Sbjct: 681 TRFHHFKNGMCSCGDYW 697
Score = 28.9 bits (63), Expect(2) = 2e-07
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3
Query: 371 LRELGYQSNTDSALHHIEDEKEK 303
L+ELGY + SALH +EDE+++
Sbjct: 601 LKELGYVPDYRSALHDVEDEQKE 623
>gb|EXB72481.1| hypothetical protein L484_011483 [Morus notabilis]
Length = 678
Score = 49.3 bits (116), Expect(2) = 2e-07
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 16/69 (23%)
Frame = -1
Query: 289 HSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL----------------HHFEN 158
HSEK AI + P + +NLR+C CH A KL+ HHF+N
Sbjct: 610 HSEKLAIVFALLNSEPGAPIRITKNLRVCGDCHTAVKLISKIAEREIVVRDTYRFHHFKN 669
Query: 157 EICSCNDKW 131
ICSC D W
Sbjct: 670 GICSCADNW 678
Score = 31.2 bits (69), Expect(2) = 2e-07
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3
Query: 371 LRELGYQSNTDSALHHIEDEKEK 303
++ELGY TDSALH +E+E ++
Sbjct: 582 MKELGYVPETDSALHDVEEEDKE 604
>ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein
SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 16/76 (21%)
Frame = -1
Query: 310 RKNGVMYHSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL-------------- 173
++N + YHSEK AIA G+ P +V+NLR+C CH A K++
Sbjct: 577 KENLLWYHSEKLAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTN 636
Query: 172 --HHFENEICSCNDKW 131
HHF+N +CSCND W
Sbjct: 637 RFHHFQNGMCSCNDYW 652
>gb|EXB52480.1| hypothetical protein L484_000681 [Morus notabilis]
Length = 976
Score = 53.5 bits (127), Expect(2) = 3e-07
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 16/69 (23%)
Frame = -1
Query: 289 HSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL----------------HHFEN 158
HSEK AI+ G+ + + V +NLRIC+ CH AAKL+ HHF++
Sbjct: 908 HSEKLAISFGLLKMSKGSTIRVSKNLRICLDCHNAAKLISKAVEREIIVRDNKRFHHFKH 967
Query: 157 EICSCNDKW 131
ICSC+D W
Sbjct: 968 GICSCSDYW 976
Score = 26.6 bits (57), Expect(2) = 3e-07
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -3
Query: 371 LRELGYQSNTDSALHHIEDEKE 306
+ +LGY+ NT LH +E+E++
Sbjct: 880 ISKLGYKPNTSCVLHELEEEEK 901
>gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 55.5 bits (132), Expect(2) = 3e-07
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 16/76 (21%)
Frame = -1
Query: 310 RKNGVMYHSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL-------------- 173
++ ++YHSEK AIA G+ +++ K V +NLR+C CH A K +
Sbjct: 704 KEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDAN 763
Query: 172 --HHFENEICSCNDKW 131
HHF+N CSC D W
Sbjct: 764 RFHHFKNGQCSCGDFW 779
Score = 24.6 bits (52), Expect(2) = 3e-07
Identities = 8/23 (34%), Positives = 18/23 (78%)
Frame = -3
Query: 371 LRELGYQSNTDSALHHIEDEKEK 303
+++LGYQ++T L +E+E+++
Sbjct: 683 IKKLGYQADTSFVLQDLEEEEKE 705
>ref|XP_004304914.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 703
Score = 57.4 bits (137), Expect(2) = 3e-07
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 16/70 (22%)
Frame = -1
Query: 292 YHSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL----------------HHFE 161
YHSEK AIA G+ V Q P V++NLR+C CH A KL+ HHF+
Sbjct: 634 YHSEKLAIAYGLLKVPQGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIIVRDANRFHHFK 693
Query: 160 NEICSCNDKW 131
+ +CSC D W
Sbjct: 694 DGLCSCRDYW 703
Score = 22.7 bits (47), Expect(2) = 3e-07
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -3
Query: 371 LRELGYQSNTDSALHHIEDEKE 306
LRE GY ++ LH +++E++
Sbjct: 607 LREAGYCPDSSFVLHDVDEEEK 628
>ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product
[Arabidopsis thaliana] gi|332008005|gb|AED95388.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 697
Score = 50.8 bits (120), Expect(2) = 3e-07
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 16/77 (20%)
Frame = -1
Query: 313 RRKNGVMYHSEKFAIALGIS*VHQRKPP*VVENLRICIFCHEAAKLL------------- 173
+++ + YHSE+ AIA G+ + V++NLR+C CH KL+
Sbjct: 621 QKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDP 680
Query: 172 ---HHFENEICSCNDKW 131
HHF+N CSC D W
Sbjct: 681 IRFHHFKNGTCSCGDYW 697
Score = 29.3 bits (64), Expect(2) = 3e-07
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3
Query: 371 LRELGYQSNTDSALHHIEDEKEK 303
L+ELGY + SALH +EDE+++
Sbjct: 601 LKELGYAPDYRSALHDVEDEQKE 623