BLASTX nr result
ID: Zingiber23_contig00053280
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00053280
(216 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays] 114 1e-23
ref|NP_001104931.1| RNA polymerase T phage-like 1 [Zea mays] gi|... 114 1e-23
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S... 113 3e-23
ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 112 4e-23
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 112 4e-23
gb|EMS47556.1| DNA-directed RNA polymerase 2, chloroplastic/mito... 112 7e-23
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe... 112 7e-23
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 111 9e-23
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr... 111 9e-23
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr... 111 9e-23
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr... 111 9e-23
gb|EMT11393.1| DNA-directed RNA polymerase 2, chloroplastic/mito... 111 1e-22
ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 111 1e-22
emb|CAE52834.1| RNA polymerase [Hordeum vulgare] 111 1e-22
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m... 110 2e-22
gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Tritic... 109 3e-22
gb|EXB44918.1| DNA-directed RNA polymerase 1 [Morus notabilis] 109 4e-22
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 108 6e-22
ref|XP_006599175.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 108 7e-22
ref|XP_002315996.2| DNA-directed RNA polymerase family protein [... 108 7e-22
>tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays]
Length = 975
Score = 114 bits (285), Expect = 1e-23
Identities = 54/71 (76%), Positives = 59/71 (83%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LL DMC++KLAPNLPYVKSLFLGWFEP RDQ+A+EQE D SR H PFF+ LPADMM
Sbjct: 160 LLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIATEQELVADPGSRASHGPFFSMLPADMM 219
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 220 AVITMHKLMGL 230
>ref|NP_001104931.1| RNA polymerase T phage-like 1 [Zea mays]
gi|4559304|gb|AAD22976.1|AF127021_1 T7-like RNA
polymerase [Zea mays]
Length = 975
Score = 114 bits (285), Expect = 1e-23
Identities = 54/71 (76%), Positives = 59/71 (83%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LL DMC++KLAPNLPYVKSLFLGWFEP RDQ+A+EQE D SR H PFF+ LPADMM
Sbjct: 160 LLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIATEQELVADPGSRASHGPFFSMLPADMM 219
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 220 AVITMHKLMGL 230
>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
gi|241924412|gb|EER97556.1| hypothetical protein
SORBIDRAFT_02g039520 [Sorghum bicolor]
Length = 976
Score = 113 bits (282), Expect = 3e-23
Identities = 52/71 (73%), Positives = 58/71 (81%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LL DMC++KLAPNLPY+KSLFLGWFEP RDQ+ +EQE D SR H P+FN LPADMM
Sbjct: 160 LLADMCEQKLAPNLPYIKSLFLGWFEPLRDQIVTEQELVADPGSRASHGPYFNMLPADMM 219
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 220 AVITMHKLMGL 230
>ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Setaria italica]
Length = 1005
Score = 112 bits (281), Expect = 4e-23
Identities = 52/71 (73%), Positives = 59/71 (83%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LL DMC++KLAPNLPY+KSLFLGWFEP RDQ+A+EQE + SR H P+FN LPADMM
Sbjct: 190 LLTDMCEQKLAPNLPYIKSLFLGWFEPLRDQIAAEQELVANRGSRASHGPYFNMLPADMM 249
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 250 AVITMHKLMGL 260
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 112 bits (281), Expect = 4e-23
Identities = 51/71 (71%), Positives = 61/71 (85%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LL DMC++KLAPNLPY+KSLFLGWFEP RD +A+EQ+ K K+R +AP+F+HLPADMM
Sbjct: 165 LLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMM 224
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 225 AVITMHKLMGL 235
>gb|EMS47556.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Triticum urartu]
Length = 854
Score = 112 bits (279), Expect = 7e-23
Identities = 52/71 (73%), Positives = 58/71 (81%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LL DMC+ KLAPNLPYVKSLFLGWFEP RDQ+ +EQE + +R HAP+FN LPADMM
Sbjct: 67 LLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVSERGTRASHAPYFNMLPADMM 126
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 127 AVITMHKLMGL 137
>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 112 bits (279), Expect = 7e-23
Identities = 50/71 (70%), Positives = 59/71 (83%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LL DMC++KLAPNLPY+KSLFLGWFEP RD +A++Q+ K SR HAP+F+HLPAD M
Sbjct: 177 LLADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQSHAPYFDHLPADKM 236
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 237 AVITMHKLMGL 247
>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Citrus sinensis]
Length = 1026
Score = 111 bits (278), Expect = 9e-23
Identities = 50/71 (70%), Positives = 61/71 (85%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LLMDMC++KLAPNLPY+KSLFLGWFEP RD +A EQE+ + K ++ +AP+F+ LPADMM
Sbjct: 210 LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMM 269
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 270 AVITMHKLMGL 280
>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533046|gb|ESR44229.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 928
Score = 111 bits (278), Expect = 9e-23
Identities = 50/71 (70%), Positives = 61/71 (85%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LLMDMC++KLAPNLPY+KSLFLGWFEP RD +A EQE+ + K ++ +AP+F+ LPADMM
Sbjct: 214 LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMM 273
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 274 AVITMHKLMGL 284
>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533045|gb|ESR44228.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 1030
Score = 111 bits (278), Expect = 9e-23
Identities = 50/71 (70%), Positives = 61/71 (85%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LLMDMC++KLAPNLPY+KSLFLGWFEP RD +A EQE+ + K ++ +AP+F+ LPADMM
Sbjct: 214 LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMM 273
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 274 AVITMHKLMGL 284
>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533044|gb|ESR44227.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 933
Score = 111 bits (278), Expect = 9e-23
Identities = 50/71 (70%), Positives = 61/71 (85%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LLMDMC++KLAPNLPY+KSLFLGWFEP RD +A EQE+ + K ++ +AP+F+ LPADMM
Sbjct: 214 LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMM 273
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 274 AVITMHKLMGL 284
>gb|EMT11393.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Aegilops tauschii]
Length = 884
Score = 111 bits (277), Expect = 1e-22
Identities = 52/71 (73%), Positives = 57/71 (80%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LL DMC+ KLAPNLPYVKSLFLGWFEP RDQ+ +EQE +R HAP+FN LPADMM
Sbjct: 116 LLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVSQRGTRASHAPYFNMLPADMM 175
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 176 AVITMHKLMGL 186
>ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Brachypodium
distachyon]
Length = 992
Score = 111 bits (277), Expect = 1e-22
Identities = 52/71 (73%), Positives = 58/71 (81%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LL DMC+ KLAPNLPYVKSLFLGWFEP RDQ+ +EQE + +R HAP+FN LPADMM
Sbjct: 177 LLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGARASHAPYFNMLPADMM 236
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 237 AVITMHKLMGL 247
>emb|CAE52834.1| RNA polymerase [Hordeum vulgare]
Length = 862
Score = 111 bits (277), Expect = 1e-22
Identities = 52/71 (73%), Positives = 58/71 (81%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LL DMC+ KLAPNLPYVKSLFLGWFEP RDQ+ +EQE + +R HAP+FN LPADMM
Sbjct: 49 LLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGTRASHAPYFNMLPADMM 108
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 109 AVITMHKLMGL 119
>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
DNA-directed RNA polymerase 2, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
Length = 997
Score = 110 bits (275), Expect = 2e-22
Identities = 49/71 (69%), Positives = 60/71 (84%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LL DMC++KLAPNLPY+KSLFLGWFEP RD +A EQE +++ ++L H P+F+ LPADMM
Sbjct: 174 LLTDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAKEQELSREKNNKLSHGPYFDALPADMM 233
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 234 AVITMHKLMGL 244
>gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Triticum aestivum]
Length = 1005
Score = 109 bits (273), Expect = 3e-22
Identities = 51/71 (71%), Positives = 57/71 (80%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LL DMC+ KLAPNLPYVKSLFL WFEP RDQ+ +EQE + +R HAP+FN LPADMM
Sbjct: 191 LLADMCEHKLAPNLPYVKSLFLSWFEPLRDQIIAEQELVSERGTRASHAPYFNMLPADMM 250
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 251 AVITMHKLMGL 261
>gb|EXB44918.1| DNA-directed RNA polymerase 1 [Morus notabilis]
Length = 1023
Score = 109 bits (272), Expect = 4e-22
Identities = 47/71 (66%), Positives = 62/71 (87%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
L++DMC+RKLAPNLPYVKSL LGWFEP RD +A++QE +++K++ +AP+F+HLPAD+M
Sbjct: 177 LMVDMCERKLAPNLPYVKSLLLGWFEPLRDAIAADQEACREMKNKPTYAPYFDHLPADVM 236
Query: 183 AVITMHKLMSL 215
AVI MHKLM L
Sbjct: 237 AVIAMHKLMGL 247
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
[Solanum tuberosum]
Length = 993
Score = 108 bits (271), Expect = 6e-22
Identities = 50/71 (70%), Positives = 61/71 (85%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LLMDMC++KLAPNLPY+KSLFLGWFEP RD +A+EQ+ + K+R +APFF+ LPA+MM
Sbjct: 183 LLMDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMM 242
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 243 AVITMHKLMGL 253
>ref|XP_006599175.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Glycine max]
Length = 957
Score = 108 bits (270), Expect = 7e-22
Identities = 49/71 (69%), Positives = 60/71 (84%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
LL DM D+KLAPNLPY+KSLFLGWFEP R+ + ++Q+ KD K R+ HAP+FN LPADMM
Sbjct: 136 LLEDMRDKKLAPNLPYMKSLFLGWFEPLRNAILADQDLCKDSKCRMSHAPYFNDLPADMM 195
Query: 183 AVITMHKLMSL 215
AV+TMHKLM+L
Sbjct: 196 AVVTMHKLMAL 206
>ref|XP_002315996.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550329816|gb|EEF02167.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 862
Score = 108 bits (270), Expect = 7e-22
Identities = 51/71 (71%), Positives = 59/71 (83%)
Frame = +3
Query: 3 LLMDMCDRKLAPNLPYVKSLFLGWFEPFRDQVASEQEKTKDIKSRLPHAPFFNHLPADMM 182
+L DMC++KLAPNLPYVKSLFLGWFEP RD + +EQE K + SR+PH +FN LPADMM
Sbjct: 41 MLEDMCEQKLAPNLPYVKSLFLGWFEPLRDAILAEQELCK-VNSRVPHRAYFNDLPADMM 99
Query: 183 AVITMHKLMSL 215
AVITMHKLM L
Sbjct: 100 AVITMHKLMGL 110