BLASTX nr result
ID: Zingiber23_contig00053253
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00053253
(271 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006361475.1| PREDICTED: putative pentatricopeptide repeat... 77 3e-12
gb|EPS68042.1| hypothetical protein M569_06731, partial [Genlise... 74 2e-11
ref|XP_006430120.1| hypothetical protein CICLE_v10011370mg [Citr... 73 3e-11
ref|XP_006468706.1| PREDICTED: pentatricopeptide repeat-containi... 72 6e-11
ref|XP_006468705.1| PREDICTED: pentatricopeptide repeat-containi... 72 6e-11
ref|XP_006448464.1| hypothetical protein CICLE_v10017589mg [Citr... 72 8e-11
gb|EMT16770.1| hypothetical protein F775_12497 [Aegilops tauschii] 71 1e-10
ref|XP_003521411.2| PREDICTED: putative pentatricopeptide repeat... 70 3e-10
ref|XP_004494227.1| PREDICTED: putative pentatricopeptide repeat... 70 4e-10
ref|XP_006481702.1| PREDICTED: putative pentatricopeptide repeat... 69 6e-10
emb|CBI15973.3| unnamed protein product [Vitis vinifera] 68 1e-09
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera] 68 1e-09
ref|NP_198573.1| pentatricopeptide repeat (PPR-like) superfamily... 68 1e-09
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
gb|EPS69071.1| hypothetical protein M569_05691, partial [Genlise... 67 2e-09
ref|XP_004250474.1| PREDICTED: putative pentatricopeptide repeat... 67 2e-09
ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat... 67 2e-09
gb|EXC24155.1| hypothetical protein L484_015170 [Morus notabilis] 67 3e-09
gb|ESW05840.1| hypothetical protein PHAVU_011G213900g [Phaseolus... 66 4e-09
>ref|XP_006361475.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Solanum tuberosum]
Length = 563
Score = 76.6 bits (187), Expect = 3e-12
Identities = 33/89 (37%), Positives = 54/89 (60%)
Frame = +2
Query: 5 AYASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSS 184
+YA+S F+ + PN+ WN L+ +++ S L + +RR + PD FTFPSL+ S
Sbjct: 64 SYATSVFEHVIQPNVYVWNTLIKGYSKKSSLVDCFVVLRQMRRSVNVKPDEFTFPSLVKS 123
Query: 185 CSRSEEINVGSSVHATILRYGLEADVFVG 271
CS + G +H ++R+G+++DVFVG
Sbjct: 124 CSNVFALREGKIIHGLLVRFGIDSDVFVG 152
>gb|EPS68042.1| hypothetical protein M569_06731, partial [Genlisea aurea]
Length = 523
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/89 (40%), Positives = 48/89 (53%)
Frame = +2
Query: 5 AYASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSS 184
+Y + FD + PN+ WN +L AH S L ALF +R PD +TFPSL+ +
Sbjct: 33 SYVTEVFDAVIDPNIYLWNIILKAHCGRSSLGRCFALFGEMRFELRGIPDKYTFPSLVKA 92
Query: 185 CSRSEEINVGSSVHATILRYGLEADVFVG 271
C R+ + G +H R G EADVFVG
Sbjct: 93 CGRAGALREGRMIHGASFRCGAEADVFVG 121
>ref|XP_006430120.1| hypothetical protein CICLE_v10011370mg [Citrus clementina]
gi|557532177|gb|ESR43360.1| hypothetical protein
CICLE_v10011370mg [Citrus clementina]
Length = 574
Score = 73.2 bits (178), Expect = 3e-11
Identities = 33/89 (37%), Positives = 55/89 (61%)
Frame = +2
Query: 5 AYASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSS 184
+Y+S+ F+RI PN WN LL ++Q S + +F L R +P D +TFP ++ +
Sbjct: 87 SYSSAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVP-DKYTFPLVIKA 145
Query: 185 CSRSEEINVGSSVHATILRYGLEADVFVG 271
CS + G+++HA ++R+G++ DVFVG
Sbjct: 146 CSHVLSVREGTAIHAAVIRWGVDEDVFVG 174
>ref|XP_006468706.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like isoform X2 [Citrus sinensis]
Length = 538
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/88 (37%), Positives = 53/88 (60%)
Frame = +2
Query: 8 YASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSSC 187
YA FD+IT N+++WNA+ + +AQ T+V LF +++ M P+ FTFP +L SC
Sbjct: 3 YARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSC 61
Query: 188 SRSEEINVGSSVHATILRYGLEADVFVG 271
+ + G +H +L+ G A++FVG
Sbjct: 62 VKINALREGEELHCLVLKNGFRANIFVG 89
>ref|XP_006468705.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like isoform X1 [Citrus sinensis]
Length = 587
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/88 (37%), Positives = 53/88 (60%)
Frame = +2
Query: 8 YASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSSC 187
YA FD+IT N+++WNA+ + +AQ T+V LF +++ M P+ FTFP +L SC
Sbjct: 52 YARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSC 110
Query: 188 SRSEEINVGSSVHATILRYGLEADVFVG 271
+ + G +H +L+ G A++FVG
Sbjct: 111 VKINALREGEELHCLVLKNGFRANIFVG 138
>ref|XP_006448464.1| hypothetical protein CICLE_v10017589mg [Citrus clementina]
gi|557551075|gb|ESR61704.1| hypothetical protein
CICLE_v10017589mg [Citrus clementina]
Length = 611
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/88 (37%), Positives = 53/88 (60%)
Frame = +2
Query: 8 YASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSSC 187
YA FD+IT N+++WNA+ + +AQ T+V LF +++ M P+ FTFP +L SC
Sbjct: 76 YARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDVM-PNCFTFPVVLKSC 134
Query: 188 SRSEEINVGSSVHATILRYGLEADVFVG 271
+ + G +H +L+ G A++FVG
Sbjct: 135 VKINALREGEELHCLVLKNGFRANIFVG 162
>gb|EMT16770.1| hypothetical protein F775_12497 [Aegilops tauschii]
Length = 554
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/70 (51%), Positives = 52/70 (74%)
Frame = +2
Query: 59 NALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSSCSRSEEINVGSSVHATIL 238
NA+L++H+++SPL +A FNI+RR + PDAF+FPSLL +CSR GS++HA +
Sbjct: 84 NAVLASHSRHSPLHAALAQFNIVRRTAC--PDAFSFPSLLRACSRVPCKPTGSALHAAAI 141
Query: 239 RYGLEADVFV 268
R GL+AD+FV
Sbjct: 142 RLGLDADLFV 151
>ref|XP_003521411.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 579
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/89 (34%), Positives = 56/89 (62%)
Frame = +2
Query: 5 AYASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSS 184
+YASS F R+ AP+ + WN L+ +H Q + S ++ F ++ +P D+FT+PS++ +
Sbjct: 92 SYASSVFHRVLAPSTVLWNTLIKSHCQKNLFSHTLSAFARMKAHGALP-DSFTYPSVIKA 150
Query: 185 CSRSEEINVGSSVHATILRYGLEADVFVG 271
CS + + G S+H + R G++ D++VG
Sbjct: 151 CSGTCKAREGKSLHGSAFRCGVDQDLYVG 179
>ref|XP_004494227.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cicer arietinum]
Length = 553
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/89 (35%), Positives = 55/89 (61%)
Frame = +2
Query: 5 AYASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSS 184
+Y+++ FDR+ P+ WN L+ H Q S + F ++ +P D++T+PS++ +
Sbjct: 66 SYSTTIFDRVLNPSTFLWNTLIRTHCQNSLFKDTLLGFVRMKAEGAIP-DSYTYPSVIKA 124
Query: 185 CSRSEEINVGSSVHATILRYGLEADVFVG 271
CS + ++ G SVH ++L+ GLE DVFVG
Sbjct: 125 CSATCKVFEGKSVHGSVLKCGLEEDVFVG 153
>ref|XP_006481702.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like isoform X1 [Citrus sinensis]
gi|568856258|ref|XP_006481703.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At5g37570-like isoform X2 [Citrus sinensis]
Length = 574
Score = 68.9 bits (167), Expect = 6e-10
Identities = 31/89 (34%), Positives = 54/89 (60%)
Frame = +2
Query: 5 AYASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSS 184
+Y+++ F+RI PN WN LL ++Q S + +F L R +P D +TFP ++ +
Sbjct: 87 SYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVP-DKYTFPLVIKA 145
Query: 185 CSRSEEINVGSSVHATILRYGLEADVFVG 271
CS + G+++ A ++R+G++ DVFVG
Sbjct: 146 CSHVLSVREGTAIQAAVIRWGVDEDVFVG 174
>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/87 (39%), Positives = 50/87 (57%)
Frame = +2
Query: 8 YASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSSC 187
YA FD+I PNL TWN L+ A+A S + +F + +SP PD FTFP L+ +
Sbjct: 87 YAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAA 146
Query: 188 SRSEEINVGSSVHATILRYGLEADVFV 268
S EE+ G + H +++ L +DVF+
Sbjct: 147 SELEELFTGKAFHGMVIKVLLGSDVFI 173
>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/87 (39%), Positives = 50/87 (57%)
Frame = +2
Query: 8 YASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSSC 187
YA FD+I PNL TWN L+ A+A S + +F + +SP PD FTFP L+ +
Sbjct: 87 YAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAA 146
Query: 188 SRSEEINVGSSVHATILRYGLEADVFV 268
S EE+ G + H +++ L +DVF+
Sbjct: 147 SELEELFTGKAFHGMVIKVLLGSDVFI 173
>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/87 (39%), Positives = 50/87 (57%)
Frame = +2
Query: 8 YASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSSC 187
YA FD+I PNL TWN L+ A+A S + +F + +SP PD FTFP L+ +
Sbjct: 87 YAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAA 146
Query: 188 SRSEEINVGSSVHATILRYGLEADVFV 268
S EE+ G + H +++ L +DVF+
Sbjct: 147 SELEELFTGKAFHGMVIKVLLGSDVFI 173
>ref|NP_198573.1| pentatricopeptide repeat (PPR-like) superfamily protein
[Arabidopsis thaliana]
gi|75170664|sp|Q9FHR3.1|PP403_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At5g37570 gi|9757967|dbj|BAB08303.1| unnamed
protein product [Arabidopsis thaliana]
gi|332006824|gb|AED94207.1| CCCH-type zinc finger
protein SOMNUS [Arabidopsis thaliana]
Length = 550
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/89 (34%), Positives = 50/89 (56%)
Frame = +2
Query: 5 AYASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSS 184
+Y+SS F+R+ +P WN L+ ++ V++ + R PD +TFP ++
Sbjct: 60 SYSSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKV 119
Query: 185 CSRSEEINVGSSVHATILRYGLEADVFVG 271
CS + ++ VGSSVH +LR G + DV VG
Sbjct: 120 CSNNGQVRVGSSVHGLVLRIGFDKDVVVG 148
>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = +2
Query: 23 FDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSSCSRSEE 202
FDRI+ NL WN ++ +A P ++L+ +R + PD FTFP +L +CS
Sbjct: 59 FDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYG-LVPDKFTFPFVLKACSALSA 117
Query: 203 INVGSSVHATILRYGLEADVFVG 271
+ G +H ++R GLE+DVFVG
Sbjct: 118 MEEGKKIHKDVIRSGLESDVFVG 140
>gb|EPS69071.1| hypothetical protein M569_05691, partial [Genlisea aurea]
Length = 726
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/88 (36%), Positives = 50/88 (56%)
Frame = +2
Query: 5 AYASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSS 184
AYA FD++ PNL +WN L+ A+A S ++LF L SP PPD FT+P + +
Sbjct: 61 AYAQKVFDQMPRPNLFSWNILVRAYASASRPLHSLSLFIRLLHHSPDPPDKFTYPFAIKA 120
Query: 185 CSRSEEINVGSSVHATILRYGLEADVFV 268
C+ ++ +G +H ++ +DVFV
Sbjct: 121 CADLSDLRLGRGIHGMAVKGNHASDVFV 148
>ref|XP_004250474.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Solanum lycopersicum]
Length = 853
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/78 (38%), Positives = 46/78 (58%)
Frame = +2
Query: 38 APNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSSCSRSEEINVGS 217
+PN+ WN L+ +++ S L + +R + PD FTFPSL+ SCS + G
Sbjct: 286 SPNVYVWNTLIKGYSKKSSLVDCFVVLKQMRTSVNVIPDEFTFPSLVKSCSNVLALKEGE 345
Query: 218 SVHATILRYGLEADVFVG 271
+H ++RYGL++DVFVG
Sbjct: 346 IIHGLLVRYGLDSDVFVG 363
>ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/88 (34%), Positives = 55/88 (62%)
Frame = +2
Query: 5 AYASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSS 184
+Y++S FDR+ +P+ WN+L+S + I++L+ + +R PD +TFPSLL
Sbjct: 78 SYSTSVFDRVLSPSTFLWNSLVSGYCAKLQFVDIISLY-VRMKREDGAPDRYTFPSLLKV 136
Query: 185 CSRSEEINVGSSVHATILRYGLEADVFV 268
C+ ++ G ++H +ILR G++ D++V
Sbjct: 137 CASEGKMMEGMALHGSILRCGVDEDIYV 164
>gb|EXC24155.1| hypothetical protein L484_015170 [Morus notabilis]
Length = 602
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/87 (33%), Positives = 50/87 (57%)
Frame = +2
Query: 8 YASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSSC 187
YA F ++ PN +WN ++ A A+ PL ++ LF + +PP+ FTFPS+ +C
Sbjct: 40 YACKVFTQMRQPNCFSWNTIIRALAETEPLEALL-LFRQMVSVGIVPPNQFTFPSVFKAC 98
Query: 188 SRSEEINVGSSVHATILRYGLEADVFV 268
+ + +G VH +++YGL+ D F+
Sbjct: 99 AGMGNVEMGKQVHGLVVKYGLDCDEFI 125
>gb|ESW05840.1| hypothetical protein PHAVU_011G213900g [Phaseolus vulgaris]
Length = 690
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/87 (35%), Positives = 49/87 (56%)
Frame = +2
Query: 8 YASSSFDRITAPNLITWNALLSAHAQYSPLSTIVALFNILRRRSPMPPDAFTFPSLLSSC 187
YA+ F + PN+ +N L+ V+L+ +R+RS PD FTFP +L +C
Sbjct: 67 YATVVFAQTPNPNIFLYNTLIRGLVSNEAFHEAVSLYASMRQRSAFAPDNFTFPFVLKAC 126
Query: 188 SRSEEINVGSSVHATILRYGLEADVFV 268
+R +VG ++H+ ++R G E DVFV
Sbjct: 127 ARLRNTHVGLTIHSLVIRTGFEKDVFV 153