BLASTX nr result
ID: Zingiber23_contig00053089
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00053089
(262 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001173031.1| Os02g0572350 [Oryza sativa Japonica Group] g... 94 1e-17
ref|XP_006648769.1| PREDICTED: RING-H2 finger protein ATL54-like... 94 2e-17
ref|XP_003580475.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 92 6e-17
gb|EEC73452.1| hypothetical protein OsI_07753 [Oryza sativa Indi... 92 6e-17
gb|EXB64911.1| RING-H2 finger protein ATL51 [Morus notabilis] 92 7e-17
ref|XP_004953511.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 92 7e-17
ref|XP_004975787.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 92 9e-17
gb|EMJ10076.1| hypothetical protein PRUPE_ppa026237mg [Prunus pe... 91 1e-16
dbj|BAJ87544.1| predicted protein [Hordeum vulgare subsp. vulgare] 91 1e-16
dbj|BAJ95962.1| predicted protein [Hordeum vulgare subsp. vulgare] 91 2e-16
ref|XP_002447933.1| hypothetical protein SORBIDRAFT_06g018375 [S... 91 2e-16
ref|XP_002452716.1| hypothetical protein SORBIDRAFT_04g031240 [S... 91 2e-16
ref|XP_006652722.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 91 2e-16
ref|XP_006408292.1| hypothetical protein EUTSA_v10022279mg [Eutr... 91 2e-16
ref|XP_006368390.1| hypothetical protein POPTR_0001s02360g [Popu... 91 2e-16
ref|NP_001047796.1| Os02g0692000 [Oryza sativa Japonica Group] g... 91 2e-16
ref|XP_002984753.1| hypothetical protein SELMODRAFT_121181 [Sela... 91 2e-16
gb|EEE57231.1| hypothetical protein OsJ_07217 [Oryza sativa Japo... 91 2e-16
gb|EAZ24248.1| hypothetical protein OsJ_07998 [Oryza sativa Japo... 91 2e-16
ref|XP_004952847.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 90 3e-16
>ref|NP_001173031.1| Os02g0572350 [Oryza sativa Japonica Group]
gi|46806010|dbj|BAD17284.1| zinc finger (C3HC4-type RING
finger)-like protein [Oryza sativa Japonica Group]
gi|255671016|dbj|BAH91760.1| Os02g0572350 [Oryza sativa
Japonica Group]
Length = 325
Score = 94.4 bits (233), Expect = 1e-17
Identities = 44/73 (60%), Positives = 51/73 (69%)
Frame = -1
Query: 244 SGDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDA 65
+G G +GA DC VCLGEFR+ E LRLLP CGHAFH+ CIDAWL+A NCPLCRA+ +
Sbjct: 99 AGAGMLGATDCPVCLGEFRDGELLRLLPKCGHAFHVPCIDAWLRAHVNCPLCRAHVLH-- 156
Query: 64 PPQGEPVDAHDNE 26
P DA D E
Sbjct: 157 -PADADADAGDGE 168
>ref|XP_006648769.1| PREDICTED: RING-H2 finger protein ATL54-like [Oryza brachyantha]
Length = 349
Score = 94.0 bits (232), Expect = 2e-17
Identities = 43/73 (58%), Positives = 52/73 (71%)
Frame = -1
Query: 244 SGDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDA 65
+G G +GA DC VCLGEFR+ E LRLLP CGHAFH+ CIDAWL+A NCPLCRA+ +
Sbjct: 140 AGAGMLGATDCSVCLGEFRDGELLRLLPKCGHAFHVPCIDAWLRAHVNCPLCRADVLH-- 197
Query: 64 PPQGEPVDAHDNE 26
P +G+ D E
Sbjct: 198 PAEGQDGDDDGGE 210
>ref|XP_003580475.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like
[Brachypodium distachyon]
Length = 387
Score = 92.4 bits (228), Expect = 6e-17
Identities = 42/73 (57%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Frame = -1
Query: 241 GDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRAN----AV 74
GDG V DC VCLGEF + E LRLLP C HAFH +CID WLK+ NCPLCR+N +V
Sbjct: 153 GDGFVNTTDCSVCLGEFHDGESLRLLPKCSHAFHQQCIDTWLKSHSNCPLCRSNITFVSV 212
Query: 73 SDAPPQGEPVDAH 35
P+ E DAH
Sbjct: 213 GAVSPEPEGGDAH 225
>gb|EEC73452.1| hypothetical protein OsI_07753 [Oryza sativa Indica Group]
Length = 280
Score = 92.4 bits (228), Expect = 6e-17
Identities = 44/73 (60%), Positives = 50/73 (68%)
Frame = -1
Query: 244 SGDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDA 65
+G G +GA DC VCLGEFRE E LRLLP CGHAF + CIDAWL+A NCPLCRA+ +
Sbjct: 57 AGAGMLGATDCPVCLGEFREGELLRLLPKCGHAFQVPCIDAWLRAHVNCPLCRAHVLH-- 114
Query: 64 PPQGEPVDAHDNE 26
P DA D E
Sbjct: 115 -PADADADAGDGE 126
>gb|EXB64911.1| RING-H2 finger protein ATL51 [Morus notabilis]
Length = 379
Score = 92.0 bits (227), Expect = 7e-17
Identities = 44/90 (48%), Positives = 53/90 (58%), Gaps = 10/90 (11%)
Frame = -1
Query: 241 GDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAP 62
GDG V DC VCL EF+E E +RLLP C HAFH++CID WL++ NCPLCRAN V
Sbjct: 141 GDGLVEGTDCSVCLSEFQEDEEVRLLPKCSHAFHIQCIDTWLRSHSNCPLCRANVVVCVN 200
Query: 61 P----------QGEPVDAHDNEAAIFVGGD 2
P E A+D++ FVG D
Sbjct: 201 PPTATEGTTFSSNESAAANDDQNRSFVGQD 230
>ref|XP_004953511.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Setaria
italica]
Length = 392
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/69 (60%), Positives = 46/69 (66%), Gaps = 4/69 (5%)
Frame = -1
Query: 241 GDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRAN----AV 74
GDG V + DC VCLGEFR+ E LRLLP C HAFHL CID WLK+ NCPLCR N V
Sbjct: 153 GDGFVDSTDCSVCLGEFRDGESLRLLPKCSHAFHLPCIDTWLKSHSNCPLCRCNITFVTV 212
Query: 73 SDAPPQGEP 47
P+ EP
Sbjct: 213 GVVSPEPEP 221
>ref|XP_004975787.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Setaria
italica]
Length = 425
Score = 91.7 bits (226), Expect = 9e-17
Identities = 38/60 (63%), Positives = 47/60 (78%)
Frame = -1
Query: 244 SGDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDA 65
+G G +GAADC VCLGEFR+ E +RLLP CGHAFH+ CID WL+A NCPLCR++ + A
Sbjct: 193 AGAGLLGAADCSVCLGEFRDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVIDPA 252
>gb|EMJ10076.1| hypothetical protein PRUPE_ppa026237mg [Prunus persica]
Length = 342
Score = 91.3 bits (225), Expect = 1e-16
Identities = 41/61 (67%), Positives = 42/61 (68%)
Frame = -1
Query: 241 GDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAP 62
GDG V DC VCL EF E ERLRLLP C HAFHL CID WLK+ NCPLCRAN V
Sbjct: 137 GDGFVEGTDCSVCLSEFEEDERLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRANIVPHQL 196
Query: 61 P 59
P
Sbjct: 197 P 197
>dbj|BAJ87544.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 398
Score = 91.3 bits (225), Expect = 1e-16
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Frame = -1
Query: 244 SGDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSD- 68
+G G +GAADC VCLGEF + E +RLLP CGHAFH+ CID WL+A NCPLCR++ +
Sbjct: 186 AGSGLLGAADCSVCLGEFNDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVIDPA 245
Query: 67 APPQGEPVDAH 35
A P G ++++
Sbjct: 246 AAPAGVGIESN 256
>dbj|BAJ95962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 331
Score = 90.9 bits (224), Expect = 2e-16
Identities = 42/68 (61%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Frame = -1
Query: 241 GDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRAN----AV 74
GDG V + DC VCLGEFR+ E LRLLP C HAFHL CID WLK+ NCPLCR N AV
Sbjct: 100 GDGFVDSTDCSVCLGEFRDGESLRLLPKCSHAFHLPCIDTWLKSHSNCPLCRCNIAFVAV 159
Query: 73 SDAPPQGE 50
P+ E
Sbjct: 160 GMVSPEPE 167
>ref|XP_002447933.1| hypothetical protein SORBIDRAFT_06g018375 [Sorghum bicolor]
gi|241939116|gb|EES12261.1| hypothetical protein
SORBIDRAFT_06g018375 [Sorghum bicolor]
Length = 420
Score = 90.9 bits (224), Expect = 2e-16
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 20/95 (21%)
Frame = -1
Query: 244 SGDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAV--- 74
+G G +GAADC VCLGEF++ E +RLLP C HAFH+ CID WL+A NCP+CR++ V
Sbjct: 193 AGAGLLGAADCSVCLGEFQDGELVRLLPKCAHAFHVPCIDTWLRAHVNCPICRSDVVDPA 252
Query: 73 -----------------SDAPPQGEPVDAHDNEAA 20
S +PP G+P DA+ N AA
Sbjct: 253 VTAAVPGGGGGSESVGSSSSPPPGDP-DANANAAA 286
>ref|XP_002452716.1| hypothetical protein SORBIDRAFT_04g031240 [Sorghum bicolor]
gi|241932547|gb|EES05692.1| hypothetical protein
SORBIDRAFT_04g031240 [Sorghum bicolor]
Length = 387
Score = 90.9 bits (224), Expect = 2e-16
Identities = 42/68 (61%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Frame = -1
Query: 241 GDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRAN----AV 74
GDG V + DC VCLGEFR+ E LRLLP C HAFHL CID WLK+ NCPLCR N AV
Sbjct: 152 GDGFVDSTDCSVCLGEFRDGESLRLLPKCSHAFHLPCIDTWLKSHSNCPLCRCNIAFVAV 211
Query: 73 SDAPPQGE 50
P+ E
Sbjct: 212 GVVSPEPE 219
>ref|XP_006652722.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Oryza
brachyantha]
Length = 384
Score = 90.5 bits (223), Expect = 2e-16
Identities = 38/54 (70%), Positives = 42/54 (77%)
Frame = -1
Query: 241 GDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRAN 80
GDG V + DC VCLGEFR+ E LRLLP C HAFH +CID WLK+ NCPLCRAN
Sbjct: 148 GDGFVHSTDCSVCLGEFRDGESLRLLPSCSHAFHQQCIDTWLKSHSNCPLCRAN 201
>ref|XP_006408292.1| hypothetical protein EUTSA_v10022279mg [Eutrema salsugineum]
gi|557109438|gb|ESQ49745.1| hypothetical protein
EUTSA_v10022279mg [Eutrema salsugineum]
Length = 381
Score = 90.5 bits (223), Expect = 2e-16
Identities = 42/78 (53%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Frame = -1
Query: 241 GDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRA-----NA 77
GDG V ++DC VCL EF+E E LRLLP C HAFH+ CID WLK+ NCPLCRA NA
Sbjct: 141 GDGFVESSDCSVCLSEFQEDESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIAGINA 200
Query: 76 VSDAPPQGEPVDAHDNEA 23
V +P+ H A
Sbjct: 201 VEAVAVSSQPISGHQVSA 218
>ref|XP_006368390.1| hypothetical protein POPTR_0001s02360g [Populus trichocarpa]
gi|550346303|gb|ERP64959.1| hypothetical protein
POPTR_0001s02360g [Populus trichocarpa]
Length = 368
Score = 90.5 bits (223), Expect = 2e-16
Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Frame = -1
Query: 241 GDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAV--SD 68
GDG + DC VCL EF+E E +RLLP C HAFH+ CID WL++ NCPLCRAN V S
Sbjct: 135 GDGLIDGTDCSVCLSEFQEDESIRLLPKCSHAFHVPCIDTWLRSHSNCPLCRANIVFFSA 194
Query: 67 APPQGEP 47
+PPQ P
Sbjct: 195 SPPQLPP 201
>ref|NP_001047796.1| Os02g0692000 [Oryza sativa Japonica Group]
gi|41052984|dbj|BAD07893.1| zinc finger (C3HC4-type RING
finger)-like [Oryza sativa Japonica Group]
gi|41053267|dbj|BAD07693.1| zinc finger (C3HC4-type RING
finger)-like [Oryza sativa Japonica Group]
gi|113537327|dbj|BAF09710.1| Os02g0692000 [Oryza sativa
Japonica Group] gi|215697950|dbj|BAG92134.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 389
Score = 90.5 bits (223), Expect = 2e-16
Identities = 38/54 (70%), Positives = 41/54 (75%)
Frame = -1
Query: 241 GDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRAN 80
GDG V + DC VCLGEFRE E LRLLP C HAFH+ CID WLK+ NCPLCR N
Sbjct: 155 GDGFVDSTDCSVCLGEFREGESLRLLPKCSHAFHVPCIDTWLKSHSNCPLCRCN 208
>ref|XP_002984753.1| hypothetical protein SELMODRAFT_121181 [Selaginella moellendorffii]
gi|300147339|gb|EFJ14003.1| hypothetical protein
SELMODRAFT_121181 [Selaginella moellendorffii]
Length = 207
Score = 90.5 bits (223), Expect = 2e-16
Identities = 37/63 (58%), Positives = 47/63 (74%)
Frame = -1
Query: 262 VRIYSSSGDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRA 83
V +Y G+G VG+++C+VCLGEF E + LR+LP C HAFHL CID WL++ NCPLCRA
Sbjct: 145 VYVYRVGGEGVVGSSECVVCLGEFEEDDELRILPKCLHAFHLSCIDVWLRSHSNCPLCRA 204
Query: 82 NAV 74
V
Sbjct: 205 PVV 207
>gb|EEE57231.1| hypothetical protein OsJ_07217 [Oryza sativa Japonica Group]
Length = 217
Score = 90.5 bits (223), Expect = 2e-16
Identities = 42/68 (61%), Positives = 48/68 (70%)
Frame = -1
Query: 229 VGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAPPQGE 50
+GA DC VCLGEFR+ E LRLLP CGHAFH+ CIDAWL+A NCPLCRA+ + P
Sbjct: 2 LGATDCPVCLGEFRDGELLRLLPKCGHAFHVPCIDAWLRAHVNCPLCRAHVLH---PADA 58
Query: 49 PVDAHDNE 26
DA D E
Sbjct: 59 DADAGDGE 66
>gb|EAZ24248.1| hypothetical protein OsJ_07998 [Oryza sativa Japonica Group]
Length = 386
Score = 90.5 bits (223), Expect = 2e-16
Identities = 38/54 (70%), Positives = 41/54 (75%)
Frame = -1
Query: 241 GDGTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRAN 80
GDG V + DC VCLGEFRE E LRLLP C HAFH+ CID WLK+ NCPLCR N
Sbjct: 152 GDGFVDSTDCSVCLGEFREGESLRLLPKCSHAFHVPCIDTWLKSHSNCPLCRCN 205
>ref|XP_004952847.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Setaria italica]
Length = 323
Score = 90.1 bits (222), Expect = 3e-16
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = -1
Query: 235 GTVGAADCLVCLGEFREAERLRLLPLCGHAFHLRCIDAWLKARGNCPLCRANAVSDAPPQ 56
G +GA+DC VCLGEF++ E LRLLP C HAFH++CID WL+A +CPLCRAN + A
Sbjct: 124 GALGASDCTVCLGEFQDGELLRLLPKCAHAFHVQCIDTWLRAHVSCPLCRANVMDPAAAA 183
Query: 55 GEPVD 41
E D
Sbjct: 184 AEQPD 188