BLASTX nr result
ID: Zingiber23_contig00053084
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00053084
(268 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW34699.1| hypothetical protein PHAVU_001G173400g [Phaseolus... 60 2e-07
ref|XP_006832839.1| hypothetical protein AMTR_s00095p00039180 [A... 60 4e-07
ref|XP_002520950.1| pentatricopeptide repeat-containing protein,... 59 9e-07
gb|EXC19411.1| hypothetical protein L484_004126 [Morus notabilis] 57 2e-06
ref|XP_006857845.1| hypothetical protein AMTR_s00069p00058270 [A... 57 2e-06
ref|XP_004495160.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 57 3e-06
ref|XP_004231170.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-06
ref|XP_002528456.1| pentatricopeptide repeat-containing protein,... 56 4e-06
ref|XP_006339454.1| PREDICTED: pentatricopeptide repeat-containi... 56 6e-06
dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protei... 56 6e-06
ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containi... 55 7e-06
gb|EMS52689.1| hypothetical protein TRIUR3_07994 [Triticum urartu] 55 7e-06
ref|XP_006842433.1| hypothetical protein AMTR_s00077p00031710 [A... 55 1e-05
gb|EMT03568.1| hypothetical protein F775_05716 [Aegilops tauschii] 55 1e-05
ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containi... 55 1e-05
>gb|ESW34699.1| hypothetical protein PHAVU_001G173400g [Phaseolus vulgaris]
Length = 763
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = -1
Query: 268 LQQAFTMFCHYALAERLQIDRATFVNLLSGVDGFELRRLGLQVHGLIIKIGFE-DGAVEN 92
+ +A + FC + L D TF++LL F R G+Q+H IIKIG + + AV N
Sbjct: 350 VNEAVSFFCQM-MHTGLMPDNITFLSLLCPCGSFVTRNQGMQIHSYIIKIGLDNEAAVCN 408
Query: 91 SLVRMYSNCGFAYDAHNLLLY-SKSQNVISW 2
SL+ MY+ C +DA N+ Y + N++SW
Sbjct: 409 SLLTMYTKCSNLHDAFNVFTYLGRRANLVSW 439
>ref|XP_006832839.1| hypothetical protein AMTR_s00095p00039180 [Amborella trichopoda]
gi|548837339|gb|ERM98117.1| hypothetical protein
AMTR_s00095p00039180 [Amborella trichopoda]
Length = 819
Score = 59.7 bits (143), Expect = 4e-07
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = -1
Query: 262 QAFTMFCHYALAERLQIDRATFVNLLSGVDGFELRRLGLQVHGLIIKIGFEDGA-VENSL 86
QAF +F + + RA+ V LL+ V + + G +HGLI+K GF D +ENSL
Sbjct: 248 QAFQIFRQIMSSPFSRPARASLVALLTAVGNSKTPKHGELIHGLIVKTGFRDEVMIENSL 307
Query: 85 VRMYSNCGFAYDAHNLLLYSKSQNVISW 2
VRMY G +DA N+ ++QNV++W
Sbjct: 308 VRMYLRVGSMWDAFNITDDYQTQNVMAW 335
>ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539787|gb|EEF41367.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 835
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = -1
Query: 220 LQIDRATFVNLLSGVDGFELRRLGLQVHGLIIKIGFE-DGAVENSLVRMYSNCGFAYDAH 44
L+ D T V++LS V + G ++HG II+ GF +G++ N+LV MY+ CG DA+
Sbjct: 458 LEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAY 517
Query: 43 NLLLYSKSQNVISW 2
+ +K++N+I W
Sbjct: 518 KIFTCTKNRNLILW 531
>gb|EXC19411.1| hypothetical protein L484_004126 [Morus notabilis]
Length = 711
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Frame = -1
Query: 247 FCHYA--LAERLQIDRATFVNLLSGVDGFELRRLGLQVHGLIIKIGFE-DGAVENSLVRM 77
FC + L E +++ R T ++L G GLQ+H L++K+ E D +++NSLV M
Sbjct: 417 FCWFTEMLHESIRVTRLTLSSMLGASAGLTTLNQGLQIHALVVKMNMEYDLSIQNSLVSM 476
Query: 76 YSNCGFAYDAHNLLLYSKSQNVISW 2
YSNCG A + + S N++S+
Sbjct: 477 YSNCGDVPSAWKIFISISSPNIVSF 501
>ref|XP_006857845.1| hypothetical protein AMTR_s00069p00058270 [Amborella trichopoda]
gi|548861947|gb|ERN19312.1| hypothetical protein
AMTR_s00069p00058270 [Amborella trichopoda]
Length = 321
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = -1
Query: 265 QQAFTMFCHYALAERLQIDRATFVNLLSGVDGFELRRLGLQVHGLIIKIGFEDG-AVENS 89
++A +FC +A R++ D + LS G + LG Q H + +++GF +++NS
Sbjct: 199 EEALKLFCEMRIA-RVKPDEFVIASALSACAGLSVLELGQQFHAIFVRLGFGSSLSIDNS 257
Query: 88 LVRMYSNCGFAYDAHNLLLYSKSQNVISW 2
LV MY+ CG DAH + ++V+SW
Sbjct: 258 LVTMYAKCGCIEDAHLVFDLMLIRDVVSW 286
>ref|XP_004495160.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g63370-like [Cicer arietinum]
Length = 1155
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = -1
Query: 220 LQIDRATFVNLLSGVDGFELRRLGLQVHGLIIKIGFE-DGAVENSLVRMYSNCGFAYDAH 44
++ D T V++LS L + G ++HG +++ GF +G + NSLV MY+ CG +A
Sbjct: 546 IEPDSITLVSVLSAAAALSLLKKGKEIHGFLLRKGFFLEGPIANSLVDMYARCGTVENAR 605
Query: 43 NLLLYSKSQNVISW 2
N+ Y+K +++I W
Sbjct: 606 NIFNYAKQKDLILW 619
>ref|XP_004231170.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Solanum lycopersicum]
Length = 762
Score = 56.2 bits (134), Expect = 4e-06
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = -1
Query: 265 QQAFTMFCHYALAERLQIDRATFVNLLSGVDGFELRRLGLQVHGLIIKIGFEDG-AVENS 89
++A +F +AE + D+ ++LS L LG QVHG IK G E +V+NS
Sbjct: 407 EEALKLFYEMRMAET-KPDQIIIASVLSSCSELALLELGQQVHGDFIKSGLEASLSVDNS 465
Query: 88 LVRMYSNCGFAYDAHNLLLYSKSQNVISW 2
L+ MY+NCG DA + + NVISW
Sbjct: 466 LMTMYANCGCLEDAKKVFNSMQMHNVISW 494
>ref|XP_002528456.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532132|gb|EEF33939.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 664
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = -1
Query: 265 QQAFTMFCHYALAERLQIDRATFVNLLSGVDGFELRRLGLQVHGLIIKIGFEDGA-VENS 89
++AF++FC L E Q + TFV++ V + G+ +H I+++GF+ V N
Sbjct: 500 KEAFSLFCQMKL-EHFQPNLVTFVSVFPAVARLSALKEGMALHACIMRMGFQSNVLVGNC 558
Query: 88 LVRMYSNCGFAYDAHNLLLYSKSQNVISW 2
L+ MY+ CG +++ +L K++N +SW
Sbjct: 559 LIDMYAKCGQLHNSEHLFHEMKNKNAVSW 587
>ref|XP_006339454.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like isoform X1 [Solanum tuberosum]
gi|565344726|ref|XP_006339455.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g27610-like isoform X2 [Solanum tuberosum]
Length = 797
Score = 55.8 bits (133), Expect = 6e-06
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = -1
Query: 265 QQAFTMFCHYALAERLQIDRATFVNLLSGVDGFELRRLGLQVHGLIIKIGFEDG-AVENS 89
++A +F AE ++ D ++LS L LG QVH IK G E +V+NS
Sbjct: 407 EEALKLFYEMRTAE-IKPDPIIIASVLSSCSELALHELGQQVHADFIKSGLEASLSVDNS 465
Query: 88 LVRMYSNCGFAYDAHNLLLYSKSQNVISW 2
L+ MY+NCG DA + + + NVISW
Sbjct: 466 LMTMYANCGCLEDAKKIFISMQMHNVISW 494
>dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group] gi|125596587|gb|EAZ36367.1|
hypothetical protein OsJ_20695 [Oryza sativa Japonica
Group] gi|218197849|gb|EEC80276.1| hypothetical protein
OsI_22264 [Oryza sativa Indica Group]
Length = 517
Score = 55.8 bits (133), Expect = 6e-06
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = -1
Query: 259 AFTMFCHYALAERLQIDRATFVNLLSGVDGFELRRLGLQVHGLIIKIGF-EDGAVENSLV 83
AF ++ A RL+ D TF LL G R G QVHG ++K+GF +D V N+L+
Sbjct: 83 AFAVYRRMTEASRLRPDAFTFCYLLRACAGLPGSRAGRQVHGAVVKLGFLKDAYVRNALI 142
Query: 82 RMYSNCGFAYDAHNLLLYSKSQNVISW 2
M++ CG A LL + +V++W
Sbjct: 143 NMFAKCGDLRVASVLLDEAGEGDVVAW 169
>ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum tuberosum]
Length = 849
Score = 55.5 bits (132), Expect = 7e-06
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = -1
Query: 262 QAFTMFCHYALAERLQIDRATFVNLLSGVDGFELRRLGLQVHGLIIKIGFEDG-AVENSL 86
+AF +F H L +++D TF +LLSG G Q+H ++K G + +V N+L
Sbjct: 461 EAFELFSH--LDSEVEVDTFTFASLLSGAASVGAVGKGEQIHARVLKAGIQSNQSVSNAL 518
Query: 85 VRMYSNCGFAYDAHNLLLYSKSQNVISW 2
+ MYS CG A + + +NVISW
Sbjct: 519 ISMYSRCGNIEAAFQVFEGMEDRNVISW 546
>gb|EMS52689.1| hypothetical protein TRIUR3_07994 [Triticum urartu]
Length = 685
Score = 55.5 bits (132), Expect = 7e-06
Identities = 32/68 (47%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = -1
Query: 202 TFVNLLSGVDGFELRRLGLQVHGLIIKIGFE-DGAVENSLVRMYSNCGFAYDAHNLLLYS 26
TF +LLS L G Q+H L IK GFE D + NSLV MYS CG+ DA
Sbjct: 336 TFASLLSAATTVGLPTKGQQLHALSIKAGFESDKGISNSLVSMYSRCGYLDDACRAFDEM 395
Query: 25 KSQNVISW 2
+NVISW
Sbjct: 396 DDRNVISW 403
>ref|XP_006842433.1| hypothetical protein AMTR_s00077p00031710 [Amborella trichopoda]
gi|548844519|gb|ERN04108.1| hypothetical protein
AMTR_s00077p00031710 [Amborella trichopoda]
Length = 932
Score = 55.1 bits (131), Expect = 1e-05
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = -1
Query: 262 QAFTMFCHYALAERLQIDRATFVNLLSGVDGFELRRLGLQVHGLIIKIGFEDGA-VENSL 86
+A MF + E L ++ TF ++L G G L G Q+HGL+ K+GF + A V +SL
Sbjct: 627 KAMEMFSKMRM-ENLSPNQFTFSSVLMGCSGLSLLEYGEQIHGLVYKLGFNEYACVGSSL 685
Query: 85 VRMYSNCGFAYDAHNLLLYSKSQNVISW 2
+ MY+ CG A + +V+SW
Sbjct: 686 IDMYAKCGCVLGARKVFKRVSDPDVVSW 713
>gb|EMT03568.1| hypothetical protein F775_05716 [Aegilops tauschii]
Length = 706
Score = 55.1 bits (131), Expect = 1e-05
Identities = 32/68 (47%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = -1
Query: 202 TFVNLLSGVDGFELRRLGLQVHGLIIKIGFE-DGAVENSLVRMYSNCGFAYDAHNLLLYS 26
TF +LLS L G Q+H L IK GFE D + NSLV MYS CG+ DA
Sbjct: 336 TFASLLSAATTVGLPTKGQQLHALSIKAGFESDKGISNSLVSMYSRCGYLDDACRAFDEM 395
Query: 25 KSQNVISW 2
NVISW
Sbjct: 396 DDHNVISW 403
>ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 55.1 bits (131), Expect = 1e-05
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Frame = -1
Query: 268 LQQAFTMFCHYALAERLQI-DRATFVNLLSGVDGFELRRLGLQVHGLIIKIGF-EDGAVE 95
LQ++F F + E + D AT V +L G E G+ VHGL +K+G E+ V
Sbjct: 183 LQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVN 242
Query: 94 NSLVRMYSNCGFAYDAHNLLLYSKSQNVISW 2
NSL+ MYS C F +A L + +N++SW
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSW 273