BLASTX nr result
ID: Zingiber23_contig00053078
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber23_contig00053078 (391 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006493995.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21 emb|CBI20254.3| unnamed protein product [Vitis vinifera] 105 6e-21 gb|EPS68063.1| hypothetical protein M569_06711, partial [Genlise... 104 1e-20 gb|EOX94498.1| Basic helix-loop-helix DNA-binding superfamily pr... 102 5e-20 ref|XP_006420414.1| hypothetical protein CICLE_v10006642mg [Citr... 100 3e-19 ref|XP_002301860.2| pentatricopeptide repeat-containing family p... 100 3e-19 gb|ESW06293.1| hypothetical protein PHAVU_010G035600g [Phaseolus... 98 1e-18 gb|EMJ01920.1| hypothetical protein PRUPE_ppa025321mg [Prunus pe... 98 1e-18 ref|XP_003530855.2| PREDICTED: pentatricopeptide repeat-containi... 96 6e-18 ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17 ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17 ref|XP_006338375.1| PREDICTED: pentatricopeptide repeat-containi... 92 5e-17 gb|EXB75130.1| hypothetical protein L484_025905 [Morus notabilis] 91 2e-16 sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-c... 87 3e-15 ref|NP_172105.4| transcription factor EMB1444 [Arabidopsis thali... 87 3e-15 gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis] 86 4e-15 ref|XP_006858224.1| hypothetical protein AMTR_s00062p00188560, p... 85 9e-15 dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana] 85 9e-15 ref|XP_004304934.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14 ref|XP_002303023.2| pentatricopeptide repeat-containing family p... 84 2e-14 >ref|XP_006493995.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like [Citrus sinensis] Length = 578 Score = 107 bits (266), Expect = 2e-21 Identities = 57/114 (50%), Positives = 73/114 (64%), Gaps = 1/114 (0%) Frame = +2 Query: 53 LKSVHATMIKSNAHQDSFFVNQFVSQC-SRIRQVGYALQVSAQMAEPNVFVYNAVFGGLA 229 L+ V+ATM+K+NA+QD F NQFVS C SR + YA+ QM EPNVFVYNA+ GL Sbjct: 42 LECVYATMVKTNANQDCFLANQFVSFCTSRFHRTDYAILAFTQMQEPNVFVYNALIRGLV 101 Query: 230 QEFASRECVELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 + + Y+ MLR+ VLP YTFS L+KAC+ L + G AVH Q+ K G Sbjct: 102 HCGHPHQAIIFYLHMLRAEVLPTSYTFSSLIKACSLLLDICSGEAVHGQVWKNG 155 >emb|CBI20254.3| unnamed protein product [Vitis vinifera] Length = 494 Score = 105 bits (262), Expect = 6e-21 Identities = 51/113 (45%), Positives = 75/113 (66%) Frame = +2 Query: 53 LKSVHATMIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGLAQ 232 L+SV+A+MIK+NA+QD F +NQF++ CS ++ YA+ M EPNVFVYNA+ L Q Sbjct: 28 LESVYASMIKANANQDCFLMNQFIAACSIFHRIDYAILAFTHMQEPNVFVYNAMIRALVQ 87 Query: 233 EFASRECVELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 + + ++ Y+ M+++ V P +TFS LVKAC+ +S + G AVH I K G Sbjct: 88 CYHPVQALDCYLDMVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYG 140 >gb|EPS68063.1| hypothetical protein M569_06711, partial [Genlisea aurea] Length = 523 Score = 104 bits (260), Expect = 1e-20 Identities = 52/109 (47%), Positives = 70/109 (64%) Frame = +2 Query: 65 HATMIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGLAQEFAS 244 + MIK+NA QD F +NQ+V+ C+ + A+ +QM+ PNVFVYNA+FG + F Sbjct: 1 YCLMIKNNAAQDCFLINQYVTACANAGSIESAVFSFSQMSNPNVFVYNAMFGAFLKCFLP 60 Query: 245 RECVELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 EC+ YV MLR+ VLP YTF L+K+C LSA E G ++H QI K G Sbjct: 61 FECLSKYVVMLRNGVLPSSYTFPALIKSCRILSAEEYGESLHGQILKCG 109 >gb|EOX94498.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao] Length = 600 Score = 102 bits (254), Expect = 5e-20 Identities = 51/113 (45%), Positives = 73/113 (64%) Frame = +2 Query: 53 LKSVHATMIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGLAQ 232 L++++ATMIK+NA+QD F NQFVS C+ ++ YA+ QM +PNVFVYNA+ GL Sbjct: 64 LETIYATMIKTNANQDCFLTNQFVSACATFCRMDYAILAFTQMQKPNVFVYNALIKGLVH 123 Query: 233 EFASRECVELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 + ++ + MLR+ V P +TFS LVKAC +S + G +VH Q+ K G Sbjct: 124 CHNPFQALDYHKHMLRAGVWPSSFTFSSLVKACGLVSELGFGESVHGQVWKHG 176 >ref|XP_006420414.1| hypothetical protein CICLE_v10006642mg [Citrus clementina] gi|557522287|gb|ESR33654.1| hypothetical protein CICLE_v10006642mg [Citrus clementina] Length = 530 Score = 99.8 bits (247), Expect = 3e-19 Identities = 53/107 (49%), Positives = 67/107 (62%), Gaps = 1/107 (0%) Frame = +2 Query: 74 MIKSNAHQDSFFVNQFVSQC-SRIRQVGYALQVSAQMAEPNVFVYNAVFGGLAQEFASRE 250 M+K+NA+QD F NQFVS C SR + YA+ QM EPNVFVYNA+ GL + Sbjct: 1 MVKTNANQDCFLANQFVSFCTSRFHRTDYAILAFTQMQEPNVFVYNALIRGLVHCGHPHQ 60 Query: 251 CVELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 + Y+ MLR+ VLP YTFS L+KAC+ L + G AVH Q+ K G Sbjct: 61 AIIFYLHMLRAEVLPTSYTFSSLIKACSLLLDICSGEAVHGQVWKNG 107 >ref|XP_002301860.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] gi|550345843|gb|EEE81133.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] Length = 933 Score = 99.8 bits (247), Expect = 3e-19 Identities = 47/110 (42%), Positives = 68/110 (61%) Frame = +2 Query: 62 VHATMIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGLAQEFA 241 ++A M+K+N +QD + +NQF+S S ++ YA+ QM PNVFVYNA+ G Q + Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60 Query: 242 SRECVELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 + +ELYV MLR+NV P YTF L+KAC +S + AVH + + G Sbjct: 61 PVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNG 110 >gb|ESW06293.1| hypothetical protein PHAVU_010G035600g [Phaseolus vulgaris] Length = 558 Score = 97.8 bits (242), Expect = 1e-18 Identities = 51/113 (45%), Positives = 65/113 (57%) Frame = +2 Query: 53 LKSVHATMIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGLAQ 232 L+SV+A MIK+N QD F +NQF+S CS + V A A M PN FVYNA+ G Sbjct: 23 LESVYACMIKTNTTQDCFLMNQFISSCSALSYVDLASSTFAHMENPNAFVYNALIRGCGH 82 Query: 233 EFASRECVELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 + Y+ MLR+NV+P+ Y+FS L+KAC L G AVH I K G Sbjct: 83 CCYPDRALGFYIHMLRNNVMPNSYSFSSLIKACTLLMDSAFGKAVHGHIWKNG 135 >gb|EMJ01920.1| hypothetical protein PRUPE_ppa025321mg [Prunus persica] Length = 529 Score = 97.8 bits (242), Expect = 1e-18 Identities = 50/106 (47%), Positives = 66/106 (62%) Frame = +2 Query: 74 MIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGLAQEFASREC 253 MIK+NA QDSFF+NQ ++ CS + ++ YA+ Q+ PNVFVYNA+ G + Sbjct: 1 MIKTNATQDSFFMNQLITACSTLSRIDYAVLAFTQIESPNVFVYNAMIKGFVCCGHPCQA 60 Query: 254 VELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 + Y+ MLR VLP YTFS L+KAC LSA+ +G AV I K G Sbjct: 61 LGCYINMLRGMVLPTSYTFSSLIKACTSLSALGVGEAVQGHIWKNG 106 >ref|XP_003530855.2| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like [Glycine max] Length = 585 Score = 95.5 bits (236), Expect = 6e-18 Identities = 49/113 (43%), Positives = 67/113 (59%) Frame = +2 Query: 53 LKSVHATMIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGLAQ 232 L+SV+A+MIK+N QD F VNQF+S CS + + A A + PNV V+NA+ G Sbjct: 50 LESVYASMIKTNTTQDCFLVNQFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVH 109 Query: 233 EFASRECVELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 S + + Y+ MLR+NV+P Y+FS L+KAC L G AVH + K G Sbjct: 110 CCYSEQALVHYMHMLRNNVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHG 162 >ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like [Cucumis sativus] Length = 600 Score = 93.6 bits (231), Expect = 2e-17 Identities = 55/114 (48%), Positives = 66/114 (57%), Gaps = 1/114 (0%) Frame = +2 Query: 53 LKSVHATMIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGLAQ 232 L + A+MIK+NA QD F V+QF+S + V Y + QM PNVFVYNA+ G Sbjct: 55 LHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIKGFVY 114 Query: 233 EFASRECVELYVGML-RSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 ++ YV ML SNVLP YTFS LVKAC + AVELG VH I K G Sbjct: 115 CGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKG 168 >ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like [Cucumis sativus] Length = 697 Score = 93.6 bits (231), Expect = 2e-17 Identities = 55/114 (48%), Positives = 66/114 (57%), Gaps = 1/114 (0%) Frame = +2 Query: 53 LKSVHATMIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGLAQ 232 L + A+MIK+NA QD F V+QF+S + V Y + QM PNVFVYNA+ G Sbjct: 152 LHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIKGFVY 211 Query: 233 EFASRECVELYVGML-RSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 ++ YV ML SNVLP YTFS LVKAC + AVELG VH I K G Sbjct: 212 CGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKG 265 >ref|XP_006338375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like isoform X1 [Solanum tuberosum] gi|565342486|ref|XP_006338376.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like isoform X2 [Solanum tuberosum] Length = 558 Score = 92.4 bits (228), Expect = 5e-17 Identities = 43/113 (38%), Positives = 68/113 (60%) Frame = +2 Query: 53 LKSVHATMIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGLAQ 232 L+S+++ M+K+ A +DSF +NQF++ CS + +A +QM PNVFVYNA+ Sbjct: 23 LESLYSLMLKNGATKDSFLMNQFIATCSALNNPDFASFAFSQMENPNVFVYNALIRAFVH 82 Query: 233 EFASRECVELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 + + + LY+ MLR+ +P YTFS +VK C + + LG +H QI + G Sbjct: 83 CHSPHKALLLYIDMLRTQNIPSSYTFSSVVKGCTLMCGLRLGECIHGQIWEYG 135 >gb|EXB75130.1| hypothetical protein L484_025905 [Morus notabilis] Length = 554 Score = 90.5 bits (223), Expect = 2e-16 Identities = 47/113 (41%), Positives = 64/113 (56%) Frame = +2 Query: 53 LKSVHATMIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGLAQ 232 L+ V+A+MIK+ A QD NQF+S S +V YA+ Q+ PNVFVYNA+ G Sbjct: 22 LEHVYASMIKTGATQDPLLTNQFISASSNFSRVDYAVLAFKQIENPNVFVYNAMIRGYVN 81 Query: 233 EFASRECVELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 + + +E YV M+R+ V P YTF L++AC L G AVH I + G Sbjct: 82 DGYPYQALECYVDMMRAKVSPTSYTFPSLIRACTLLFVPGFGEAVHGHIWRNG 134 >sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444 Length = 577 Score = 86.7 bits (213), Expect = 3e-15 Identities = 48/115 (41%), Positives = 69/115 (60%) Frame = +2 Query: 47 EVLKSVHATMIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGL 226 ++L+S A MIK++ +QD +NQF++ C+ +++ A+ QM EPNVFVYNA+F G Sbjct: 42 KLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGF 101 Query: 227 AQEFASRECVELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 +ELYV MLR +V P YT+S LVKA + A G ++ A I K G Sbjct: 102 VTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFG 154 >ref|NP_172105.4| transcription factor EMB1444 [Arabidopsis thaliana] gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains multiple PPR PF|01535 repeats. ESTs gb|AV565358, gb|AV558710, gb|AV524184 come from this gene [Arabidopsis thaliana] gi|332189826|gb|AEE27947.1| bHLH transcription factor LHL1 [Arabidopsis thaliana] Length = 1322 Score = 86.7 bits (213), Expect = 3e-15 Identities = 48/115 (41%), Positives = 69/115 (60%) Frame = +2 Query: 47 EVLKSVHATMIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGL 226 ++L+S A MIK++ +QD +NQF++ C+ +++ A+ QM EPNVFVYNA+F G Sbjct: 787 KLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGF 846 Query: 227 AQEFASRECVELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 +ELYV MLR +V P YT+S LVKA + A G ++ A I K G Sbjct: 847 VTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFG 899 >gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis] Length = 688 Score = 86.3 bits (212), Expect = 4e-15 Identities = 39/113 (34%), Positives = 62/113 (54%) Frame = +2 Query: 53 LKSVHATMIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGLAQ 232 LK VHA++++ QD+F +N F Y L V +PN++V+N V GL Sbjct: 32 LKHVHASLLRLGLDQDNFLLNLFFRYAFDFGNTSYPLLVFRHTKQPNIYVWNTVIRGLVS 91 Query: 233 EFASRECVELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 + ++ Y M R LP+G+TF +++KACA+LS +LG +H + K+G Sbjct: 92 SHCFDDAIDFYFSMRRQGFLPNGFTFPFVLKACARLSDFQLGLRIHTHVVKVG 144 >ref|XP_006858224.1| hypothetical protein AMTR_s00062p00188560, partial [Amborella trichopoda] gi|548862327|gb|ERN19691.1| hypothetical protein AMTR_s00062p00188560, partial [Amborella trichopoda] Length = 150 Score = 85.1 bits (209), Expect = 9e-15 Identities = 41/106 (38%), Positives = 63/106 (59%) Frame = +2 Query: 74 MIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGLAQEFASREC 253 M K + SF VNQ+VS CS + YA+ V A + +PN+FV+N++ G + +E Sbjct: 1 MFKISLSHKSFAVNQYVSACSSTGSMDYAISVFAHLQKPNIFVWNSMIKGFVHCHSYQEA 60 Query: 254 VELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 + +Y +L S+V YTFS ++KAC Q+ + LG ++H Q KLG Sbjct: 61 ISMYKKLLVSSVSATSYTFSSVIKACTQVLGLSLGESIHGQALKLG 106 >dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana] Length = 577 Score = 85.1 bits (209), Expect = 9e-15 Identities = 48/115 (41%), Positives = 68/115 (59%) Frame = +2 Query: 47 EVLKSVHATMIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGL 226 ++L+S A MIK++ +QD +NQF++ C+ + + A+ QM EPNVFVYNA+F G Sbjct: 42 KLLESALAAMIKTSLNQDCRLMNQFITACTSFKCLDLAVSTMTQMQEPNVFVYNALFKGF 101 Query: 227 AQEFASRECVELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 +ELYV MLR +V P YT+S LVKA + A G ++ A I K G Sbjct: 102 VTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFG 154 >ref|XP_004304934.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Fragaria vesca subsp. vesca] Length = 739 Score = 84.7 bits (208), Expect = 1e-14 Identities = 39/113 (34%), Positives = 65/113 (57%) Frame = +2 Query: 53 LKSVHATMIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGLAQ 232 L +HA ++ +F + + V+ S + + YA QV + +P VF++NA+ G ++ Sbjct: 84 LTQIHAQLLVLGFQASAFLITKLVNCSSNLGHISYARQVFDEFTDPGVFLWNAIIRGYSK 143 Query: 233 EFASRECVELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 A + V++Y GM V PDG+TF +++KAC L AVE+G VH Q+ + G Sbjct: 144 HNAYADAVQMYCGMQEMGVGPDGFTFPHVLKACGGLGAVEIGRRVHGQVFRHG 196 >ref|XP_002303023.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] gi|550345712|gb|EEE82296.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] Length = 621 Score = 84.0 bits (206), Expect = 2e-14 Identities = 38/110 (34%), Positives = 66/110 (60%) Frame = +2 Query: 62 VHATMIKSNAHQDSFFVNQFVSQCSRIRQVGYALQVSAQMAEPNVFVYNAVFGGLAQEFA 241 +HA +I+++ HQD F V + + CS + +GYA ++ + PNV++Y A+ GL Sbjct: 51 IHAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCY 110 Query: 242 SRECVELYVGMLRSNVLPDGYTFSYLVKACAQLSAVELGAAVHAQIEKLG 391 + + LY M+ S+++PD Y + ++KAC A++ G VH+Q+ KLG Sbjct: 111 YTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLG 160