BLASTX nr result

ID: Zingiber23_contig00053074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00053074
         (298 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001686788.1| putative coat protein [Rose cryptic virus 1]...    51   1e-06

>ref|YP_001686788.1| putative coat protein [Rose cryptic virus 1]
           gi|157849944|gb|ABV89763.1| unknown [Rosa multiflora
           cryptic virus] gi|167077477|gb|ABZ10947.1| putative coat
           protein [Rose cryptic virus 1]
          Length = 346

 Score = 51.2 bits (121), Expect(2) = 1e-06
 Identities = 23/55 (41%), Positives = 31/55 (56%)
 Frame = +1

Query: 1   LKTGSPWWTYNYQLYHDHYDLRCIFPPSNYSDHTCILASMFLGTIGNPPSPTQIM 165
           +K+GS WWTY     H   DL C  PP+NYSD    L S+FL T  +    ++I+
Sbjct: 251 IKSGSAWWTYKLNNAHGTTDLVCTIPPTNYSDLGVALRSLFLATAADSDECSEII 305



 Score = 26.9 bits (58), Expect(2) = 1e-06
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 194 PDGYQFRAFAALCHAPREE 250
           P     RAF ALCH P EE
Sbjct: 322 PPNSNIRAFLALCHGPLEE 340


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