BLASTX nr result

ID: Zingiber23_contig00053070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00053070
         (271 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004984470.1| PREDICTED: putative pentatricopeptide repeat...    50   1e-05

>ref|XP_004984470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Setaria italica]
          Length = 749

 Score = 50.1 bits (118), Expect(2) = 1e-05
 Identities = 21/32 (65%), Positives = 27/32 (84%)
 Frame = +1

Query: 127 SATKFISKLSNREILLKDLVRFHKFSGWACSC 222
           +ATKFISK++ R+IL++D VRFHKFS   CSC
Sbjct: 714 NATKFISKITGRDILVRDAVRFHKFSNGVCSC 745



 Score = 24.6 bits (52), Expect(2) = 1e-05
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +3

Query: 93  VKNPHVCVDCH 125
           VKN  VCVDCH
Sbjct: 703 VKNLRVCVDCH 713


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