BLASTX nr result

ID: Zingiber23_contig00053060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00053060
         (493 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001050451.1| Os03g0439000 [Oryza sativa Japonica Group] g...    57   3e-06
gb|AAR89020.1| hypothetical protein [Oryza sativa Japonica Group...    57   3e-06

>ref|NP_001050451.1| Os03g0439000 [Oryza sativa Japonica Group]
           gi|113548922|dbj|BAF12365.1| Os03g0439000, partial
           [Oryza sativa Japonica Group]
          Length = 315

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 41/123 (33%), Positives = 52/123 (42%), Gaps = 28/123 (22%)
 Frame = +1

Query: 118 PRAAPTVSNNFYARPSPSPR----ILSAGRTSAGWRRSASAAPPGWGAVFRLGVAKAPEI 285
           PR  P   + FYA PSPSPR    +   G  SAG R + SA P  WG + RLGV  AP++
Sbjct: 145 PRRRPLSGSLFYAHPSPSPRPSQRLSGGGGGSAGRRSTGSAPPASWG-LLRLGVVGAPDV 203

Query: 286 ------DIRSRGSANGRKKVAPP------------------GGRWSCKCLPDAVEPTAVS 393
                    +RG +   +   P                   G    C C PDAVEP   +
Sbjct: 204 YPPRPAPAAARGGSRSARFEQPRAAAKDAVAWEKNLPLGFLGAGLVCNCSPDAVEPVGSA 263

Query: 394 NSA 402
            +A
Sbjct: 264 EAA 266


>gb|AAR89020.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|108709035|gb|ABF96830.1| expressed protein [Oryza
           sativa Japonica Group] gi|125544456|gb|EAY90595.1|
           hypothetical protein OsI_12196 [Oryza sativa Indica
           Group] gi|125586789|gb|EAZ27453.1| hypothetical protein
           OsJ_11401 [Oryza sativa Japonica Group]
          Length = 320

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 41/123 (33%), Positives = 52/123 (42%), Gaps = 28/123 (22%)
 Frame = +1

Query: 118 PRAAPTVSNNFYARPSPSPR----ILSAGRTSAGWRRSASAAPPGWGAVFRLGVAKAPEI 285
           PR  P   + FYA PSPSPR    +   G  SAG R + SA P  WG + RLGV  AP++
Sbjct: 150 PRRRPLSGSLFYAHPSPSPRPSQRLSGGGGGSAGRRSTGSAPPASWG-LLRLGVVGAPDV 208

Query: 286 ------DIRSRGSANGRKKVAPP------------------GGRWSCKCLPDAVEPTAVS 393
                    +RG +   +   P                   G    C C PDAVEP   +
Sbjct: 209 YPPRPAPAAARGGSRSARFEQPRAAAKDAVAWEKNLPLGFLGAGLVCNCSPDAVEPVGSA 268

Query: 394 NSA 402
            +A
Sbjct: 269 EAA 271


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