BLASTX nr result
ID: Zingiber23_contig00052668
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00052668
(290 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006453304.1| hypothetical protein CICLE_v10009088mg [Citr... 52 3e-07
ref|XP_006453303.1| hypothetical protein CICLE_v10009088mg [Citr... 52 3e-07
ref|XP_006453302.1| hypothetical protein CICLE_v10009088mg [Citr... 52 3e-07
ref|NP_200538.1| methyltransferase-like protein [Arabidopsis tha... 47 5e-06
ref|XP_002300071.1| hypothetical protein POPTR_0001s36030g [Popu... 46 8e-06
>ref|XP_006453304.1| hypothetical protein CICLE_v10009088mg [Citrus clementina]
gi|567922598|ref|XP_006453305.1| hypothetical protein
CICLE_v10009088mg [Citrus clementina]
gi|567922600|ref|XP_006453306.1| hypothetical protein
CICLE_v10009088mg [Citrus clementina]
gi|567922602|ref|XP_006453307.1| hypothetical protein
CICLE_v10009088mg [Citrus clementina]
gi|568840547|ref|XP_006474228.1| PREDICTED: ribosome
biogenesis methyltransferase WBSCR22-like isoform X1
[Citrus sinensis] gi|568840549|ref|XP_006474229.1|
PREDICTED: ribosome biogenesis methyltransferase
WBSCR22-like isoform X2 [Citrus sinensis]
gi|557556530|gb|ESR66544.1| hypothetical protein
CICLE_v10009088mg [Citrus clementina]
gi|557556531|gb|ESR66545.1| hypothetical protein
CICLE_v10009088mg [Citrus clementina]
gi|557556532|gb|ESR66546.1| hypothetical protein
CICLE_v10009088mg [Citrus clementina]
gi|557556533|gb|ESR66547.1| hypothetical protein
CICLE_v10009088mg [Citrus clementina]
Length = 291
Score = 51.6 bits (122), Expect(2) = 3e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = -2
Query: 97 KGRECVLKKKEQMRNKGYNIPSDTQYTAQKRK 2
KGRE VLKKKEQMR KG +P DT+YTA+KRK
Sbjct: 257 KGREWVLKKKEQMRRKGCAVPPDTKYTARKRK 288
Score = 28.5 bits (62), Expect(2) = 3e-07
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Frame = -3
Query: 243 FSILGCGPISLSIS**RNTFVVSSIKGSCKVD------------VYD*NRPRKKLKVNNK 100
F +L CGP S+S + V ++ SC D + D +RPRKK K+ NK
Sbjct: 199 FLVLTCGPPSISSEAPKGK--VGDME-SCSDDESSGDEENRTVCISDRHRPRKKQKITNK 255
Query: 99 GK 94
GK
Sbjct: 256 GK 257
>ref|XP_006453303.1| hypothetical protein CICLE_v10009088mg [Citrus clementina]
gi|557556529|gb|ESR66543.1| hypothetical protein
CICLE_v10009088mg [Citrus clementina]
Length = 207
Score = 51.6 bits (122), Expect(2) = 3e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = -2
Query: 97 KGRECVLKKKEQMRNKGYNIPSDTQYTAQKRK 2
KGRE VLKKKEQMR KG +P DT+YTA+KRK
Sbjct: 173 KGREWVLKKKEQMRRKGCAVPPDTKYTARKRK 204
Score = 28.5 bits (62), Expect(2) = 3e-07
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Frame = -3
Query: 243 FSILGCGPISLSIS**RNTFVVSSIKGSCKVD------------VYD*NRPRKKLKVNNK 100
F +L CGP S+S + V ++ SC D + D +RPRKK K+ NK
Sbjct: 115 FLVLTCGPPSISSEAPKGK--VGDME-SCSDDESSGDEENRTVCISDRHRPRKKQKITNK 171
Query: 99 GK 94
GK
Sbjct: 172 GK 173
>ref|XP_006453302.1| hypothetical protein CICLE_v10009088mg [Citrus clementina]
gi|557556528|gb|ESR66542.1| hypothetical protein
CICLE_v10009088mg [Citrus clementina]
Length = 169
Score = 51.6 bits (122), Expect(2) = 3e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = -2
Query: 97 KGRECVLKKKEQMRNKGYNIPSDTQYTAQKRK 2
KGRE VLKKKEQMR KG +P DT+YTA+KRK
Sbjct: 135 KGREWVLKKKEQMRRKGCAVPPDTKYTARKRK 166
Score = 28.5 bits (62), Expect(2) = 3e-07
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Frame = -3
Query: 243 FSILGCGPISLSIS**RNTFVVSSIKGSCKVD------------VYD*NRPRKKLKVNNK 100
F +L CGP S+S + V ++ SC D + D +RPRKK K+ NK
Sbjct: 77 FLVLTCGPPSISSEAPKGK--VGDME-SCSDDESSGDEENRTVCISDRHRPRKKQKITNK 133
Query: 99 GK 94
GK
Sbjct: 134 GK 135
>ref|NP_200538.1| methyltransferase-like protein [Arabidopsis thaliana]
gi|8777361|dbj|BAA96951.1| protein carboxyl
methylase-like [Arabidopsis thaliana]
gi|17529048|gb|AAL38734.1| putative protein carboxyl
methylase [Arabidopsis thaliana]
gi|20465285|gb|AAM20006.1| putative carboxyl methylase
[Arabidopsis thaliana] gi|332009493|gb|AED96876.1|
methyltransferase-like protein [Arabidopsis thaliana]
Length = 289
Score = 46.6 bits (109), Expect(2) = 5e-06
Identities = 19/32 (59%), Positives = 28/32 (87%)
Frame = -2
Query: 97 KGRECVLKKKEQMRNKGYNIPSDTQYTAQKRK 2
KGRE VL+KKEQ R KG N+P+D+++T++KR+
Sbjct: 255 KGREWVLRKKEQSRRKGKNVPADSKFTSRKRR 286
Score = 29.3 bits (64), Expect(2) = 5e-06
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = -3
Query: 243 FSILGCGPISLSIS**RNTFVVSSIKG-------SCKVDVYD*NRPRKKLKVNNKGK 94
F +L CG + SI +N + S + S +V V D NRPRK+ + N K K
Sbjct: 199 FLVLTCGTVQTSIQTSKNEYDESCSEDDNSDDEESEEVGVSDRNRPRKRQRTNTKVK 255
>ref|XP_002300071.1| hypothetical protein POPTR_0001s36030g [Populus trichocarpa]
gi|222847329|gb|EEE84876.1| hypothetical protein
POPTR_0001s36030g [Populus trichocarpa]
Length = 289
Score = 45.8 bits (107), Expect(2) = 8e-06
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = -2
Query: 97 KGRECVLKKKEQMRNKGYNIPSDTQYTAQKRK 2
KGR+ + KKKEQ+R KG +P DT+YT +KRK
Sbjct: 255 KGRDWIFKKKEQLRRKGNAVPPDTRYTGRKRK 286
Score = 29.3 bits (64), Expect(2) = 8e-06
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 14/64 (21%)
Frame = -3
Query: 243 FSILGCGPISLSIS**RNTFVVSSIKG----SCKVD----------VYD*NRPRKKLKVN 106
+ +L CGP SLS + V KG SC D + D NRP+KK K+
Sbjct: 199 YLVLTCGPPSLSTA-------VPRGKGEDGESCSEDENSEENQMVCISDRNRPKKKQKIT 251
Query: 105 NKGK 94
KGK
Sbjct: 252 RKGK 255