BLASTX nr result

ID: Zingiber23_contig00052488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00052488
         (268 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD40873.2| OSJNBa0064H22.10 [Oryza sativa Japonica Group] g...    63   5e-08
ref|NP_001052922.1| Os04g0448300 [Oryza sativa Japonica Group] g...    63   5e-08
ref|XP_003581287.1| PREDICTED: aspartic proteinase nepenthesin-1...    62   1e-07
gb|EMT14245.1| Aspartic proteinase nepenthesin-1 [Aegilops tausc...    57   3e-06
dbj|BAJ94496.1| predicted protein [Hordeum vulgare subsp. vulgar...    57   3e-06
gb|EAY94310.1| hypothetical protein OsI_16079 [Oryza sativa Indi...    56   6e-06

>emb|CAD40873.2| OSJNBa0064H22.10 [Oryza sativa Japonica Group]
           gi|116310063|emb|CAH67084.1| H0818E04.1 [Oryza sativa
           Indica Group] gi|116310186|emb|CAH67198.1|
           OSIGBa0152K17.10 [Oryza sativa Indica Group]
          Length = 444

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 32/69 (46%), Positives = 40/69 (57%)
 Frame = -2

Query: 207 SSLSGLRVELTHVDSDGNFSKFELLRRAAMRSSHRVARLTXXXXXXXXXXXXXXXXSQVE 28
           S L GLRV LTHVD+ GN+S+ +LLRRAA RS HR++RL                   ++
Sbjct: 26  SRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVARATGVPMTSSKAAGGGDLQ 85

Query: 27  APVHPRNGE 1
            PVH  NGE
Sbjct: 86  VPVHAGNGE 94


>ref|NP_001052922.1| Os04g0448300 [Oryza sativa Japonica Group]
           gi|113564493|dbj|BAF14836.1| Os04g0448300 [Oryza sativa
           Japonica Group] gi|215766465|dbj|BAG98773.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215767943|dbj|BAH00172.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 454

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 32/69 (46%), Positives = 40/69 (57%)
 Frame = -2

Query: 207 SSLSGLRVELTHVDSDGNFSKFELLRRAAMRSSHRVARLTXXXXXXXXXXXXXXXXSQVE 28
           S L GLRV LTHVD+ GN+S+ +LLRRAA RS HR++RL                   ++
Sbjct: 36  SRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVARATGVPMTSSKAAGGGDLQ 95

Query: 27  APVHPRNGE 1
            PVH  NGE
Sbjct: 96  VPVHAGNGE 104


>ref|XP_003581287.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Brachypodium
           distachyon]
          Length = 468

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
 Frame = -2

Query: 258 VLFFILQISALILMVRCSS------LSGLRVELTHVDSDGNFSKFELLRRAAMRSSHRVA 97
           VL  +L +S  I++   SS      L GLRV LTHVD+ GN++K +LLRRAA RS HR++
Sbjct: 29  VLVSLLLVSMAIVLAAASSHPAAGLLDGLRVPLTHVDAHGNYTKLQLLRRAARRSHHRMS 88

Query: 96  RLTXXXXXXXXXXXXXXXXSQVEAPVHPRNGE 1
           RL                   ++ PVH  NGE
Sbjct: 89  RLV---ARTATGSVKAAAAPDLQVPVHAGNGE 117


>gb|EMT14245.1| Aspartic proteinase nepenthesin-1 [Aegilops tauschii]
          Length = 499

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/67 (46%), Positives = 39/67 (58%)
 Frame = -2

Query: 201 LSGLRVELTHVDSDGNFSKFELLRRAAMRSSHRVARLTXXXXXXXXXXXXXXXXSQVEAP 22
           L GLRV LTHVD+ GN++K +LLRRAA RS HR++RL                   ++ P
Sbjct: 36  LEGLRVALTHVDAHGNYTKLQLLRRAARRSRHRMSRLV-ARTTGVPMMSSKAVAPALQVP 94

Query: 21  VHPRNGE 1
           VH  NGE
Sbjct: 95  VHAGNGE 101


>dbj|BAJ94496.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326514480|dbj|BAJ96227.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 449

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/67 (46%), Positives = 39/67 (58%)
 Frame = -2

Query: 201 LSGLRVELTHVDSDGNFSKFELLRRAAMRSSHRVARLTXXXXXXXXXXXXXXXXSQVEAP 22
           L GLRV LTHVD+ GN++K +LLRRAA RS HR++RL                   ++ P
Sbjct: 36  LEGLRVALTHVDAHGNYTKLQLLRRAARRSRHRMSRLV-ARTTGVPVMSSKAVAPALQVP 94

Query: 21  VHPRNGE 1
           VH  NGE
Sbjct: 95  VHAGNGE 101


>gb|EAY94310.1| hypothetical protein OsI_16079 [Oryza sativa Indica Group]
          Length = 423

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/69 (46%), Positives = 38/69 (55%)
 Frame = -2

Query: 207 SSLSGLRVELTHVDSDGNFSKFELLRRAAMRSSHRVARLTXXXXXXXXXXXXXXXXSQVE 28
           S L GLRV LTHVD+ GN+S+ +LLRRAA RS HR++RL                     
Sbjct: 26  SRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRL--------------------- 64

Query: 27  APVHPRNGE 1
            PVH  NGE
Sbjct: 65  VPVHAGNGE 73


Top