BLASTX nr result

ID: Zingiber23_contig00052469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00052469
         (282 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE05519.1| OSJNBa0038P21.12 [Oryza sativa Japonica Group] g...    61   1e-07
gb|EEE60793.1| hypothetical protein OsJ_14379 [Oryza sativa Japo...    60   3e-07

>emb|CAE05519.1| OSJNBa0038P21.12 [Oryza sativa Japonica Group]
           gi|116309554|emb|CAH66616.1| OSIGBa0144C23.2 [Oryza
           sativa Indica Group]
          Length = 1094

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
 Frame = +2

Query: 47  LGFGLAVVSIVMKAFGSPRTGRVSPSEALTPSSQKQRPP---RIPKENVDPCPAPSDRSP 217
           L + LA ++ V      P  G  + + AL    ++  PP   R+PKENVDP  +P+  SP
Sbjct: 19  LPYFLATLNEVSLLQARPPPGHAAAALALR-RRRRDTPPSRRRVPKENVDPGSSPAGHSP 77

Query: 218 FRSPANSGKPLSAKNRSLLPP 280
           FRSP +S KPL  +NR LLPP
Sbjct: 78  FRSPTSSAKPLGNRNRGLLPP 98


>gb|EEE60793.1| hypothetical protein OsJ_14379 [Oryza sativa Japonica Group]
          Length = 1109

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
 Frame = +2

Query: 104 TGR---VSPSEALTPSSQKQRPP---RIPKENVDPCPAPSDRSPFRSPANSGKPLSAKNR 265
           TGR     P  +L+       PP   R+PKENVDP  +P+  SPFRSP +S KPL  +NR
Sbjct: 34  TGRHPATPPPPSLSGGGGGDTPPSRRRVPKENVDPGSSPAGHSPFRSPTSSAKPLGNRNR 93

Query: 266 SLLPP 280
            LLPP
Sbjct: 94  GLLPP 98


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