BLASTX nr result
ID: Zingiber23_contig00052399
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00052399
(293 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002453091.1| hypothetical protein SORBIDRAFT_04g038305 [S... 75 7e-12
gb|AFW74147.1| hypothetical protein ZEAMMB73_269656 [Zea mays] 67 2e-09
ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
emb|CBI31119.3| unnamed protein product [Vitis vinifera] 65 7e-09
ref|XP_004954507.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
gb|EMJ22674.1| hypothetical protein PRUPE_ppa004164mg [Prunus pe... 62 6e-08
ref|XP_006481967.1| PREDICTED: pentatricopeptide repeat-containi... 62 8e-08
ref|XP_006649201.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_006430418.1| hypothetical protein CICLE_v10011492mg [Citr... 62 1e-07
ref|NP_001048611.1| Os02g0830000 [Oryza sativa Japonica Group] g... 60 2e-07
gb|EAY88112.1| hypothetical protein OsI_09550 [Oryza sativa Indi... 60 2e-07
gb|EMT03787.1| hypothetical protein F775_12207 [Aegilops tauschii] 60 3e-07
ref|XP_004981246.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
gb|EMT32214.1| hypothetical protein F775_11465 [Aegilops tauschii] 60 4e-07
ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
gb|EXB87349.1| Serine/threonine-protein phosphatase PP2A-4 catal... 59 5e-07
ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays] 58 1e-06
ref|NP_001145890.1| uncharacterized protein LOC100279406 [Zea ma... 58 1e-06
ref|XP_003604365.1| Pentatricopeptide repeat-containing protein ... 58 2e-06
>ref|XP_002453091.1| hypothetical protein SORBIDRAFT_04g038305 [Sorghum bicolor]
gi|241932922|gb|EES06067.1| hypothetical protein
SORBIDRAFT_04g038305 [Sorghum bicolor]
Length = 514
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/57 (63%), Positives = 45/57 (78%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLRSFSND 119
RR M+ R+ KVPGCSM+EVDGVA EFVAGDRSH +++EI+SAIR + QLR +D
Sbjct: 457 RRTMDQRKVAKVPGCSMLEVDGVASEFVAGDRSHPRMQEIMSAIRDLHGQLRQLDHD 513
>gb|AFW74147.1| hypothetical protein ZEAMMB73_269656 [Zea mays]
Length = 524
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/57 (59%), Positives = 40/57 (70%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLRSFSND 119
RR ME R+ KVPGCSM+EV GV EFVAGDRSH + EI+SA R + QLR +D
Sbjct: 455 RRDMEERRVAKVPGCSMLEVGGVVCEFVAGDRSHPLMPEIMSASRDLHGQLRQLDHD 511
>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLRS 131
R+ ME ++ KVPGCS++EVDG +EFVAGD SH + EI+ + GIDK L+S
Sbjct: 471 RKGMEEKKVKKVPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLLLGIDKHLKS 523
>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLRS 131
R+ ME ++ KVPGCS++EVDG +EFVAGD SH + EI+ + GIDK L+S
Sbjct: 446 RKGMEEKKVKKVPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLLLGIDKHLKS 498
>ref|XP_004954507.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Setaria italica]
Length = 499
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = -2
Query: 259 KVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLRSFSND 119
KVPGCSMVEVDGVA EFVAGDRSH+++ +I+SA+R + LR +D
Sbjct: 449 KVPGCSMVEVDGVACEFVAGDRSHRRMPDIMSAVRDLHAHLRHRFDD 495
>gb|EMJ22674.1| hypothetical protein PRUPE_ppa004164mg [Prunus persica]
Length = 526
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLRS--FSNDP 116
R+ ME ++ KVPGCS+VEV+G +EFVAGDRSH + EI+ A IDK L+S F D
Sbjct: 462 RKGMEEKKVRKVPGCSLVEVNGEVFEFVAGDRSHVLMDEIMLASLVIDKHLKSRCFDRDD 521
Query: 115 SAI 107
I
Sbjct: 522 DKI 524
>ref|XP_006481967.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Citrus sinensis]
Length = 546
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLRS 131
RR ME + KVPGCS++EVDGV EFV+G+R++ ++EI+ + GIDK L+S
Sbjct: 470 RRGMEDNEVRKVPGCSLIEVDGVVCEFVSGERTNVLMEEIVLLLFGIDKHLKS 522
>ref|XP_006649201.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Oryza brachyantha]
Length = 504
Score = 61.6 bits (148), Expect = 1e-07
Identities = 34/52 (65%), Positives = 37/52 (71%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLR 134
RR ME R+ +KVPGCSMVEVDGVA EFVAGDRS Q II +D QLR
Sbjct: 448 RRGMEERRVLKVPGCSMVEVDGVAREFVAGDRS--QEAWIIDVAEQLDAQLR 497
>ref|XP_006430418.1| hypothetical protein CICLE_v10011492mg [Citrus clementina]
gi|557532475|gb|ESR43658.1| hypothetical protein
CICLE_v10011492mg [Citrus clementina]
Length = 519
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLRS 131
RR ME + KVPGCS++EVDGV EFV+G+R++ ++EI+ + GIDK L+S
Sbjct: 446 RRGMEDNEVRKVPGCSLIEVDGVICEFVSGERTNVLMEEIVLLLFGIDKHLKS 498
>ref|NP_001048611.1| Os02g0830000 [Oryza sativa Japonica Group]
gi|48716334|dbj|BAD22946.1| pentatricopeptide
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|113538142|dbj|BAF10525.1| Os02g0830000 [Oryza
sativa Japonica Group] gi|125584254|gb|EAZ25185.1|
hypothetical protein OsJ_08985 [Oryza sativa Japonica
Group]
Length = 500
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHK 185
RR ME R+ +KVPGCSMVEVDGVA EFVAGDRSH+
Sbjct: 449 RRGMEERKVVKVPGCSMVEVDGVAREFVAGDRSHE 483
>gb|EAY88112.1| hypothetical protein OsI_09550 [Oryza sativa Indica Group]
Length = 500
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHK 185
RR ME R+ +KVPGCSMVEVDGVA EFVAGDRSH+
Sbjct: 449 RRGMEERKVVKVPGCSMVEVDGVAREFVAGDRSHE 483
>gb|EMT03787.1| hypothetical protein F775_12207 [Aegilops tauschii]
Length = 588
Score = 60.1 bits (144), Expect = 3e-07
Identities = 32/57 (56%), Positives = 39/57 (68%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLRSFSND 119
R ME ++ KVPGCSMVEVDGVA EFVAGDR I + +RG+D+QLR +D
Sbjct: 447 RSVMEEKKVAKVPGCSMVEVDGVACEFVAGDRFLDPC--INTVVRGLDQQLRLLGHD 501
>ref|XP_004981246.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like isoform X1 [Setaria italica]
gi|514812916|ref|XP_004981247.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21065-like isoform X2 [Setaria italica]
Length = 615
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLRSFSNDPSA 110
RR M R KVPGCS+VE+DG +EF+AGD SH Q KEI + + ++LR + P+
Sbjct: 469 RREMSKRGFKKVPGCSVVELDGEVHEFIAGDESHPQWKEIYRMVEEMARELRRIGHIPAT 528
Query: 109 I*IIM 95
+++
Sbjct: 529 SEVLL 533
>gb|EMT32214.1| hypothetical protein F775_11465 [Aegilops tauschii]
Length = 452
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLR 134
RR M R KVPGCS+VE+DG +EF+AGD SH Q KEI + + ++LR
Sbjct: 318 RREMSKRGITKVPGCSLVELDGEVHEFIAGDESHPQYKEIYRMVEEMSRELR 369
>ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLR 134
RR M R KVPGCS+VE+DG +EF+AGD SH Q KEI + + ++LR
Sbjct: 465 RREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQYKEIYRMVEEMSRELR 516
>gb|EXB87349.1| Serine/threonine-protein phosphatase PP2A-4 catalytic subunit
[Morus notabilis]
Length = 783
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAI 158
R+ ME+++ KVPGCS +EVDG+ YEFVAGDRSH + EI+ +
Sbjct: 462 RKKMEMKKVAKVPGCSSIEVDGLVYEFVAGDRSHVLMDEIVRTL 505
>ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLRSFSNDPSA 110
R MEV+ KVPG +M+E+D YEFVAGD+SHKQ KEI + + ++++ PS
Sbjct: 460 REVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPST 519
Query: 109 I*IIM 95
+++
Sbjct: 520 SEVLL 524
>gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLR 134
RR M R KVPGCS+VE+DG +EF+AGD SH Q KEI + + ++LR
Sbjct: 473 RREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELR 524
>ref|NP_001145890.1| uncharacterized protein LOC100279406 [Zea mays]
gi|219884839|gb|ACL52794.1| unknown [Zea mays]
Length = 318
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLR 134
RR M R KVPGCS+VE+DG +EF+AGD SH Q KEI + + ++LR
Sbjct: 172 RREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELR 223
>ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 874
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = -2
Query: 289 RRAMEVRQAMKVPGCSMVEVDGVAYEFVAGDRSHKQIKEIISAIRGIDKQLRSFSNDP 116
R+ M R K+PGCS++E++G+ YEFVAGD+SH Q KEI + + + + L + P
Sbjct: 598 RKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQDLSNAGYSP 655