BLASTX nr result
ID: Zingiber23_contig00052368
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00052368
(491 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI35789.3| unnamed protein product [Vitis vinifera] 97 3e-18
ref|XP_003548383.1| PREDICTED: RING-H2 finger protein ATL3-like ... 96 6e-18
ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like ... 96 6e-18
gb|ESW07352.1| hypothetical protein PHAVU_010G122600g [Phaseolus... 95 8e-18
ref|XP_004159030.1| PREDICTED: RING-H2 finger protein ATL60-like... 95 1e-17
ref|XP_004141825.1| PREDICTED: RING-H2 finger protein ATL60-like... 95 1e-17
ref|XP_002263215.1| PREDICTED: RING-H2 finger protein ATL60-like... 95 1e-17
emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera] 95 1e-17
ref|NP_177375.1| RING-H2 finger protein ATL3 [Arabidopsis thalia... 94 1e-17
gb|AFK35896.1| unknown [Lotus japonicus] 94 1e-17
ref|XP_004303767.1| PREDICTED: RING-H2 finger protein ATL3-like ... 94 2e-17
ref|XP_006465795.1| PREDICTED: RING-H2 finger protein ATL60-like... 93 3e-17
gb|ESW11053.1| hypothetical protein PHAVU_009G261400g [Phaseolus... 93 3e-17
ref|XP_006426811.1| hypothetical protein CICLE_v10026156mg [Citr... 93 3e-17
ref|XP_002887428.1| hypothetical protein ARALYDRAFT_476359 [Arab... 93 4e-17
gb|EOY27406.1| RING-H2 finger protein ATL3, putative [Theobroma ... 92 5e-17
ref|XP_006302551.1| hypothetical protein CARUB_v10020652mg [Caps... 92 7e-17
gb|EMJ17020.1| hypothetical protein PRUPE_ppa010059mg [Prunus pe... 92 7e-17
ref|XP_002891772.1| zinc finger family protein [Arabidopsis lyra... 91 1e-16
ref|XP_002533814.1| RING-H2 finger protein ATL1M, putative [Rici... 91 2e-16
>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 96.7 bits (239), Expect = 3e-18
Identities = 50/101 (49%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Frame = +2
Query: 2 RPGTFKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEE 181
RP FK+GLEC VCLSEL GE A LLP+C H FH+ CIDMWF SHSTCPLCR A
Sbjct: 112 RPEEFKDGLECAVCLSELVTGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNLVAT-S 170
Query: 182 SEVAKSGAQLLNSSQSIL-----NTTASSDLCARIGDSNSQ 289
S + N +IL S+ LC G ++SQ
Sbjct: 171 SAAGDYSLESPNYPTNILFWGNQTRVTSAGLCLEEGAASSQ 211
>ref|XP_003548383.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
Length = 319
Score = 95.5 bits (236), Expect = 6e-18
Identities = 42/76 (55%), Positives = 51/76 (67%)
Frame = +2
Query: 2 RPGTFKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEE 181
+P FKEGLEC VCLSE+ GE LLP+C H FH+ CIDMWF SHSTCPLCR E
Sbjct: 98 QPEEFKEGLECAVCLSEIVEGEKLRLLPKCNHGFHVDCIDMWFHSHSTCPLCRNPVTFES 157
Query: 182 SEVAKSGAQLLNSSQS 229
S++ ++ L +S S
Sbjct: 158 SKIEENNNVLGSSEDS 173
>ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
Length = 314
Score = 95.5 bits (236), Expect = 6e-18
Identities = 43/76 (56%), Positives = 50/76 (65%)
Frame = +2
Query: 2 RPGTFKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEE 181
+P FKEGLEC VCLSE+ GE LLP+C H FH+ CIDMWF SHSTCPLCR A E
Sbjct: 99 QPEDFKEGLECAVCLSEIVQGEKLRLLPKCNHGFHVDCIDMWFHSHSTCPLCRNPVAFES 158
Query: 182 SEVAKSGAQLLNSSQS 229
S+ +S + S S
Sbjct: 159 SKCEESNVSGNSDSSS 174
>gb|ESW07352.1| hypothetical protein PHAVU_010G122600g [Phaseolus vulgaris]
Length = 315
Score = 95.1 bits (235), Expect = 8e-18
Identities = 46/94 (48%), Positives = 54/94 (57%)
Frame = +2
Query: 2 RPGTFKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEE 181
+P FKEGLEC VCLSE+ GE A LLP+C H FH+ CIDMWF SHSTCPLCR E
Sbjct: 105 QPEDFKEGLECAVCLSEIVQGEKARLLPKCNHGFHVDCIDMWFHSHSTCPLCRNPVGFES 164
Query: 182 SEVAKSGAQLLNSSQSILNTTASSDLCARIGDSN 283
S+ + N S L +S + SN
Sbjct: 165 SKTIEESNSSGNIDSSSLAHEENSGAVSGSQSSN 198
>ref|XP_004159030.1| PREDICTED: RING-H2 finger protein ATL60-like [Cucumis sativus]
Length = 267
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/59 (69%), Positives = 45/59 (76%)
Frame = +2
Query: 5 PGTFKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEE 181
P FKEGLEC VCLSEL+ GE A LLPRC H FH+ CIDMWF S+STCPLCR A+ E
Sbjct: 91 PADFKEGLECAVCLSELSEGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAITE 149
>ref|XP_004141825.1| PREDICTED: RING-H2 finger protein ATL60-like [Cucumis sativus]
Length = 262
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/59 (69%), Positives = 45/59 (76%)
Frame = +2
Query: 5 PGTFKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEE 181
P FKEGLEC VCLSEL+ GE A LLPRC H FH+ CIDMWF S+STCPLCR A+ E
Sbjct: 91 PADFKEGLECAVCLSELSEGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAITE 149
>ref|XP_002263215.1| PREDICTED: RING-H2 finger protein ATL60-like [Vitis vinifera]
Length = 304
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/62 (66%), Positives = 45/62 (72%)
Frame = +2
Query: 2 RPGTFKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEE 181
RP FK+GLEC VCLSEL GE A LLP+C H FH+ CIDMWF SHSTCPLCR A
Sbjct: 99 RPEEFKDGLECAVCLSELVTGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNLVATVL 158
Query: 182 SE 187
S+
Sbjct: 159 SD 160
>emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]
Length = 959
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/62 (66%), Positives = 45/62 (72%)
Frame = +2
Query: 2 RPGTFKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEE 181
RP FK+GLEC VCLSEL GE A LLP+C H FH+ CIDMWF SHSTCPLCR A
Sbjct: 99 RPEEFKDGLECAVCLSELVTGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNLVATVL 158
Query: 182 SE 187
S+
Sbjct: 159 SD 160
>ref|NP_177375.1| RING-H2 finger protein ATL3 [Arabidopsis thaliana]
gi|68565343|sp|Q9XF63.1|ATL3_ARATH RecName: Full=RING-H2
finger protein ATL3 gi|4928397|gb|AAD33581.1|AF132013_1
RING-H2 zinc finger protein ATL3 [Arabidopsis thaliana]
gi|12323672|gb|AAG51805.1|AC067754_21 RING-H2 zinc
finger protein ATL3; 90350-91324 [Arabidopsis thaliana]
gi|12325277|gb|AAG52584.1|AC016529_15 RING-H2 zinc
finger protein (ATL3); 86824-85850 [Arabidopsis
thaliana] gi|33589686|gb|AAQ22609.1| At1g72310
[Arabidopsis thaliana] gi|110743698|dbj|BAE99686.1|
RING-H2 zinc finger protein [Arabidopsis thaliana]
gi|332197180|gb|AEE35301.1| RING-H2 finger protein ATL3
[Arabidopsis thaliana]
Length = 324
Score = 94.4 bits (233), Expect = 1e-17
Identities = 41/96 (42%), Positives = 62/96 (64%)
Frame = +2
Query: 2 RPGTFKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEE 181
R + K+GLEC +CLSEL G+ A LLP+C H+FH+ CIDMWF SHSTCP+CR T E
Sbjct: 117 RQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPE 176
Query: 182 SEVAKSGAQLLNSSQSILNTTASSDLCARIGDSNSQ 289
+K Q+ +++++ T + D +++ S+ +
Sbjct: 177 QASSKRVEQVPDNAENAGTTNNNHDALSQLSTSSPE 212
>gb|AFK35896.1| unknown [Lotus japonicus]
Length = 286
Score = 94.4 bits (233), Expect = 1e-17
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +2
Query: 14 FKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEESE 187
FK+GLEC VCLSEL GE A LLP+C H FH+ CIDMWF SHSTCPLCRT+ A +S+
Sbjct: 93 FKDGLECAVCLSELDEGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRTSVASHDSD 150
>ref|XP_004303767.1| PREDICTED: RING-H2 finger protein ATL3-like [Fragaria vesca subsp.
vesca]
Length = 303
Score = 94.0 bits (232), Expect = 2e-17
Identities = 45/76 (59%), Positives = 51/76 (67%)
Frame = +2
Query: 5 PGTFKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEES 184
P FKEGLEC VCLS+L GE A LLP+C H FH+ CIDMWF SHSTCPLCR AV
Sbjct: 99 PEDFKEGLECAVCLSDLVQGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRN--AVVPE 156
Query: 185 EVAKSGAQLLNSSQSI 232
VA+S + + S I
Sbjct: 157 AVARSDSSISELSVEI 172
>ref|XP_006465795.1| PREDICTED: RING-H2 finger protein ATL60-like [Citrus sinensis]
Length = 309
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/84 (53%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = +2
Query: 14 FKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEESEVA 193
FK+GLEC VCLSEL GE A LLP+C H FH+ CIDMWF SHSTCPLCR VE S
Sbjct: 104 FKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNG 163
Query: 194 KSGAQL---LNSSQSILNTTASSD 256
+ + +SQ L + S+D
Sbjct: 164 NGEPSVEIDIQNSQESLESGYSTD 187
>gb|ESW11053.1| hypothetical protein PHAVU_009G261400g [Phaseolus vulgaris]
gi|561012147|gb|ESW11054.1| hypothetical protein
PHAVU_009G261400g [Phaseolus vulgaris]
Length = 281
Score = 93.2 bits (230), Expect = 3e-17
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = +2
Query: 14 FKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEESE 187
FK+GLEC VCLSE+ GE A LLP+C H FH+ CIDMWF SHSTCPLCR + AV+ E
Sbjct: 93 FKDGLECAVCLSEVVEGEKARLLPKCNHGFHVGCIDMWFQSHSTCPLCRNSVAVQSDE 150
>ref|XP_006426811.1| hypothetical protein CICLE_v10026156mg [Citrus clementina]
gi|557528801|gb|ESR40051.1| hypothetical protein
CICLE_v10026156mg [Citrus clementina]
Length = 304
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/84 (53%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = +2
Query: 14 FKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEESEVA 193
FK+GLEC VCLSEL GE A LLP+C H FH+ CIDMWF SHSTCPLCR VE S
Sbjct: 104 FKDGLECAVCLSELEDGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNPVDVERSNNG 163
Query: 194 KSGAQL---LNSSQSILNTTASSD 256
+ + +SQ L + S+D
Sbjct: 164 NGEPSVEIDIQNSQESLESGYSTD 187
>ref|XP_002887428.1| hypothetical protein ARALYDRAFT_476359 [Arabidopsis lyrata subsp.
lyrata] gi|297333269|gb|EFH63687.1| hypothetical protein
ARALYDRAFT_476359 [Arabidopsis lyrata subsp. lyrata]
Length = 324
Score = 92.8 bits (229), Expect = 4e-17
Identities = 41/96 (42%), Positives = 61/96 (63%)
Frame = +2
Query: 2 RPGTFKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEE 181
R + K+GLEC +CLSEL G+ A LLP+C H+FH+ CIDMWF SHSTCP+CR T +
Sbjct: 116 RQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPD 175
Query: 182 SEVAKSGAQLLNSSQSILNTTASSDLCARIGDSNSQ 289
+K Q+ +++ +T + D ++I S+ +
Sbjct: 176 KASSKRVEQVPDNADHAGSTNNNHDALSQISTSSPE 211
>gb|EOY27406.1| RING-H2 finger protein ATL3, putative [Theobroma cacao]
Length = 294
Score = 92.4 bits (228), Expect = 5e-17
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +2
Query: 2 RPGTFKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEE 181
R FK+GLEC VCLSEL GE A LLP+C H FH+ CIDMWF SHSTCPLCR A E
Sbjct: 94 RQEEFKDGLECAVCLSELVEGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRNPVAAVE 153
Query: 182 SE 187
E
Sbjct: 154 VE 155
>ref|XP_006302551.1| hypothetical protein CARUB_v10020652mg [Capsella rubella]
gi|482571261|gb|EOA35449.1| hypothetical protein
CARUB_v10020652mg [Capsella rubella]
Length = 325
Score = 92.0 bits (227), Expect = 7e-17
Identities = 41/93 (44%), Positives = 57/93 (61%)
Frame = +2
Query: 2 RPGTFKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEE 181
R + K+GLEC +CLSEL G+ A LLP+C H+FH+ CIDMWF SHSTCP+CR T E
Sbjct: 121 RQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPE 180
Query: 182 SEVAKSGAQLLNSSQSILNTTASSDLCARIGDS 280
+K + + + T ++ D ++I S
Sbjct: 181 QPSSKRVEHVPENVDHVGGTNSNHDTLSQISTS 213
>gb|EMJ17020.1| hypothetical protein PRUPE_ppa010059mg [Prunus persica]
Length = 266
Score = 92.0 bits (227), Expect = 7e-17
Identities = 45/83 (54%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Frame = +2
Query: 14 FKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVE---ES 184
FK+GLEC VCLSEL GE A LLP+C H FH+ CIDMWF SHSTCP+CR A E +S
Sbjct: 105 FKDGLECAVCLSELVQGEKARLLPKCSHGFHVDCIDMWFQSHSTCPICRNPVAPESSVDS 164
Query: 185 EVAKSGAQLLNSSQSILNTTASS 253
A S + L S + + A S
Sbjct: 165 GAAGSSSALAESDSVQILSPAES 187
>ref|XP_002891772.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297337614|gb|EFH68031.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 320
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/72 (58%), Positives = 50/72 (69%)
Frame = +2
Query: 14 FKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEESEVA 193
FK+GLEC VCLSEL G+ A +LPRC H FH+ CIDMWF SHSTCPLCR T E E
Sbjct: 109 FKDGLECAVCLSELVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSVE-ETI 167
Query: 194 KSGAQLLNSSQS 229
G++ L +Q+
Sbjct: 168 HGGSEGLPQNQN 179
>ref|XP_002533814.1| RING-H2 finger protein ATL1M, putative [Ricinus communis]
gi|223526251|gb|EEF28567.1| RING-H2 finger protein
ATL1M, putative [Ricinus communis]
Length = 281
Score = 90.5 bits (223), Expect = 2e-16
Identities = 37/56 (66%), Positives = 44/56 (78%)
Frame = +2
Query: 14 FKEGLECPVCLSELTVGEAATLLPRCGHAFHLHCIDMWFCSHSTCPLCRTTAAVEE 181
FK+GLEC VCLSE+ GE A LLP+C H FH+ CIDMWF SHSTCPLCR + A ++
Sbjct: 92 FKDGLECAVCLSEIAQGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRNSVAPQQ 147