BLASTX nr result
ID: Zingiber23_contig00052347
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00052347
(565 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002299342.1| predicted protein [Populus trichocarpa] 199 4e-49
emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera] 197 1e-48
ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containi... 197 1e-48
emb|CBI35666.3| unnamed protein product [Vitis vinifera] 197 1e-48
gb|EOX99645.1| Pentatricopeptide repeat (PPR) superfamily protei... 192 4e-47
ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containi... 189 3e-46
ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containi... 189 4e-46
ref|XP_002512657.1| pentatricopeptide repeat-containing protein,... 189 4e-46
ref|XP_006290013.1| hypothetical protein CARUB_v10003644mg [Caps... 188 9e-46
ref|XP_004310241.1| PREDICTED: pentatricopeptide repeat-containi... 187 2e-45
gb|EPS68237.1| hypothetical protein M569_06531 [Genlisea aurea] 186 3e-45
ref|XP_006844488.1| hypothetical protein AMTR_s00016p00115350 [A... 184 1e-44
ref|XP_002873605.1| pentatricopeptide repeat-containing protein ... 184 2e-44
gb|ESW29077.1| hypothetical protein PHAVU_002G041500g [Phaseolus... 183 3e-44
ref|XP_006399818.1| hypothetical protein EUTSA_v10012768mg [Eutr... 180 2e-43
ref|NP_196831.1| protein required for accD RNA editing 1 [Arabid... 179 5e-43
ref|XP_006368854.1| hypothetical protein POPTR_0001s13120g [Popu... 170 2e-40
ref|XP_001785140.1| predicted protein [Physcomitrella patens] gi... 146 3e-33
ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containi... 141 1e-31
gb|ABR16216.1| unknown [Picea sitchensis] 138 8e-31
>ref|XP_002299342.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 199 bits (506), Expect = 4e-49
Identities = 92/176 (52%), Positives = 128/176 (72%)
Frame = +3
Query: 33 VDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVG 212
++IGKQIHS+ ++ G ++ S++T + NMY KCG+L+ + LV + M E+NA +WT +MVG
Sbjct: 127 LEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVG 186
Query: 213 YTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSD 392
YTQA RQ +AL LF M+ E ELD +VFSIVLKAC+ G+QIHG I+KLG++S+
Sbjct: 187 YTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESE 246
Query: 393 VSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMFK 560
VS GTP+VDFYV N+ A AF+ IS+PN+V+WSA+I GY Q+G EE + F+
Sbjct: 247 VSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFE 302
Score = 119 bits (297), Expect = 7e-25
Identities = 57/186 (30%), Positives = 102/186 (54%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+L C ++ G+QIH ++VK+G +++S+ T LV+ Y KC L+S+ + + E N
Sbjct: 218 VLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPN 277
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
SW++L+ GY Q EAL F+ + + +++ F ++ + +ACS ++ +G Q H
Sbjct: 278 DVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHA 337
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
IK + + + ++ Y G + A F+ I P+ VAW+AIIAGY+ G E
Sbjct: 338 DAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPE 397
Query: 543 CFRMFK 560
++F+
Sbjct: 398 ALKLFR 403
Score = 90.9 bits (224), Expect = 2e-16
Identities = 49/172 (28%), Positives = 86/172 (50%)
Frame = +3
Query: 42 GKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVGYTQ 221
G+ H M + + ++ ++ MY KCG L + V D M ERN SW +++ Y +
Sbjct: 29 GRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAE 88
Query: 222 ASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSDVSA 401
+ +F +M+ T+ + + L++ + GKQIH I+ G+ S+ S
Sbjct: 89 NGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASV 148
Query: 402 GTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMF 557
T I + YV G + A+ F+++S+ N VAW+ I+ GY+Q R + +F
Sbjct: 149 NTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALF 200
Score = 67.8 bits (164), Expect = 2e-09
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+ C+ + + G Q H+ +K ++ ++ MY++CG LD + V + + + +
Sbjct: 319 IFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPD 378
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQ-IH 359
A +WT+++ GY EAL LF+ M + F VL ACS SG G+Q +
Sbjct: 379 AVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLE 438
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRIS-QPNEVAWSAIIAG 515
G+ + + +VD Y G + EA + P+ ++W ++ G
Sbjct: 439 SMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491
>emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 197 bits (502), Expect = 1e-48
Identities = 93/185 (50%), Positives = 131/185 (70%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
LL C +++GKQ+HS++++ + +I+++T + NMY +CG+L+ + LV D M +N
Sbjct: 194 LLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQN 253
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
A +WT LMVGYTQA + AL LF M +E ELD FVFSIVLK C +W GKQIH
Sbjct: 254 AVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHS 313
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
I+KLG +S+VS GTP+VDFYV G+I A +F RIS+PN+V+WSA+I+G+SQ GR E+
Sbjct: 314 HIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLED 373
Query: 543 CFRMF 557
C ++F
Sbjct: 374 CIKIF 378
Score = 128 bits (321), Expect = 1e-27
Identities = 62/175 (35%), Positives = 104/175 (59%)
Frame = +3
Query: 36 DIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVGY 215
D+GKQIHS++VK+G +++S+ T LV+ Y KCG ++S+ + E N SW++L+ G+
Sbjct: 306 DMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGF 365
Query: 216 TQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSDV 395
+Q+ R + + +F + E L+ F+++ V +AC+ N G Q HG IK G+ S +
Sbjct: 366 SQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYL 425
Query: 396 SAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMFK 560
+ +V Y G + A+ AF+ I +P+ VAW+AII+GY+ G E F+
Sbjct: 426 YGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFR 480
Score = 82.0 bits (201), Expect = 9e-14
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 2/173 (1%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+ C N+++G Q H +K G + + ++ +V MY+KCG LD + + + E +
Sbjct: 396 VFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPD 455
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
A +WT+++ GY EAL F+ M + F VL ACS SG KQ G
Sbjct: 456 AVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLG 515
Query: 363 CIIK-LGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRIS-QPNEVAWSAIIAG 515
+ + G+ + ++D Y G + EA +R+ +P+ ++W +++ G
Sbjct: 516 SMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGG 568
Score = 80.9 bits (198), Expect = 2e-13
Identities = 45/172 (26%), Positives = 83/172 (48%)
Frame = +3
Query: 42 GKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVGYTQ 221
G+ IH + + + SI+ L+ MY CG V D M+ +N SW ++ Y +
Sbjct: 106 GRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAK 165
Query: 222 ASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSDVSA 401
+A+ LF M + V+ +L++C + GKQ+H +I+ ++++++
Sbjct: 166 NGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITV 225
Query: 402 GTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMF 557
T I + YV G + A+ FD + N V W+ ++ GY+Q + E +F
Sbjct: 226 ETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELF 277
>ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Vitis vinifera]
Length = 835
Score = 197 bits (501), Expect = 1e-48
Identities = 93/185 (50%), Positives = 131/185 (70%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
LL C +++GKQIHS++++ + +I+++T + NMY +CG+L+ + LV D M +N
Sbjct: 194 LLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQN 253
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
A +WT LMVGYTQA + AL LF M +E ELD FVFSIVLK C +W G+QIH
Sbjct: 254 AVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHS 313
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
I+KLG +S+VS GTP+VDFYV G+I A +F RIS+PN+V+WSA+I+G+SQ GR E+
Sbjct: 314 HIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLED 373
Query: 543 CFRMF 557
C ++F
Sbjct: 374 CIKIF 378
Score = 126 bits (317), Expect = 3e-27
Identities = 61/175 (34%), Positives = 104/175 (59%)
Frame = +3
Query: 36 DIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVGY 215
D+G+QIHS++VK+G +++S+ T LV+ Y KCG ++S+ + E N SW++L+ G+
Sbjct: 306 DMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGF 365
Query: 216 TQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSDV 395
+Q+ R + + +F + E L+ F+++ V +AC+ N G Q HG IK G+ S +
Sbjct: 366 SQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYL 425
Query: 396 SAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMFK 560
+ +V Y G + A+ AF+ I +P+ VAW+AII+GY+ G E F+
Sbjct: 426 YGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFR 480
Score = 82.0 bits (201), Expect = 9e-14
Identities = 46/172 (26%), Positives = 83/172 (48%)
Frame = +3
Query: 42 GKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVGYTQ 221
G+ IH + + + SI+ L+ MY CG V D M+ +N SW ++ Y +
Sbjct: 106 GRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAK 165
Query: 222 ASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSDVSA 401
+A+ LF M + V+ +L++C + GKQIH +I+ ++++++
Sbjct: 166 NGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITV 225
Query: 402 GTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMF 557
T I + YV G + A+ FD + N V W+ ++ GY+Q + E +F
Sbjct: 226 ETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELF 277
Score = 75.5 bits (184), Expect = 9e-12
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+ C N+++G Q H +K G + + ++ +V MY+KCG LD + + + E +
Sbjct: 396 VFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPD 455
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
A +WT+++ GY EAL F+ M + F VL ACS SG KQ G
Sbjct: 456 AVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLG 515
Query: 363 CIIK-LGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRIS 476
+ + G+ + ++D Y G + EA +RI+
Sbjct: 516 SMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRIA 554
>emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 197 bits (501), Expect = 1e-48
Identities = 93/185 (50%), Positives = 131/185 (70%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
LL C +++GKQIHS++++ + +I+++T + NMY +CG+L+ + LV D M +N
Sbjct: 194 LLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQN 253
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
A +WT LMVGYTQA + AL LF M +E ELD FVFSIVLK C +W G+QIH
Sbjct: 254 AVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHS 313
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
I+KLG +S+VS GTP+VDFYV G+I A +F RIS+PN+V+WSA+I+G+SQ GR E+
Sbjct: 314 HIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLED 373
Query: 543 CFRMF 557
C ++F
Sbjct: 374 CIKIF 378
Score = 126 bits (317), Expect = 3e-27
Identities = 61/175 (34%), Positives = 104/175 (59%)
Frame = +3
Query: 36 DIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVGY 215
D+G+QIHS++VK+G +++S+ T LV+ Y KCG ++S+ + E N SW++L+ G+
Sbjct: 306 DMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGF 365
Query: 216 TQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSDV 395
+Q+ R + + +F + E L+ F+++ V +AC+ N G Q HG IK G+ S +
Sbjct: 366 SQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYL 425
Query: 396 SAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMFK 560
+ +V Y G + A+ AF+ I +P+ VAW+AII+GY+ G E F+
Sbjct: 426 YGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFR 480
Score = 82.0 bits (201), Expect = 9e-14
Identities = 46/172 (26%), Positives = 83/172 (48%)
Frame = +3
Query: 42 GKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVGYTQ 221
G+ IH + + + SI+ L+ MY CG V D M+ +N SW ++ Y +
Sbjct: 106 GRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAK 165
Query: 222 ASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSDVSA 401
+A+ LF M + V+ +L++C + GKQIH +I+ ++++++
Sbjct: 166 NGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITV 225
Query: 402 GTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMF 557
T I + YV G + A+ FD + N V W+ ++ GY+Q + E +F
Sbjct: 226 ETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELF 277
Score = 81.6 bits (200), Expect = 1e-13
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 2/173 (1%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+ C N+++G Q H +K G + + ++ +V MY+KCG LD + + + E +
Sbjct: 396 VFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPD 455
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
A +WT+++ GY EAL F+ M + F VL ACS SG KQ G
Sbjct: 456 AVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLG 515
Query: 363 CIIK-LGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRIS-QPNEVAWSAIIAG 515
+ + G+ + ++D Y G + EA +R+ +P+ ++W +++ G
Sbjct: 516 SMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGG 568
>gb|EOX99645.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 762
Score = 192 bits (489), Expect = 4e-47
Identities = 90/176 (51%), Positives = 128/176 (72%)
Frame = +3
Query: 33 VDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVG 212
++IGKQIHS +++ G S ++S+ T + NMYAKCG+L+ + LV+ MVE+NA +WT LM+G
Sbjct: 205 LEIGKQIHSLLIRTGLSTNVSVITAISNMYAKCGWLEGAKLVMGQMVEKNAVAWTGLMMG 264
Query: 213 YTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSD 392
TQA +Q +AL LF M+ E +LD FVFS+VLKAC+ + G+QIHG ++KLG +SD
Sbjct: 265 CTQADKQKDALELFGKMVKEGVKLDGFVFSVVLKACAGLEDLNLGRQIHGYVVKLGFESD 324
Query: 393 VSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMFK 560
V GTP+VD YV A AF+RIS+PN+V+WSAI+ GY Q+G+ E+ ++FK
Sbjct: 325 VFVGTPVVDLYVKCAWFESACRAFERISEPNDVSWSAIVTGYCQVGKFEKSLKIFK 380
Score = 129 bits (325), Expect = 4e-28
Identities = 58/186 (31%), Positives = 111/186 (59%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+L C ++++G+QIH Y+VK+GF +D+ + T +V++Y KC + +S+ + + E N
Sbjct: 296 VLKACAGLEDLNLGRQIHGYVVKLGFESDVFVGTPVVDLYVKCAWFESACRAFERISEPN 355
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
SW++++ GY Q + ++L +FK + +++ L+ FV++ + +ACS ++ G Q+H
Sbjct: 356 DVSWSAIVTGYCQVGKFEKSLKIFKSLRIKDVSLNSFVYTSIFQACSVLADFNVGAQVHA 415
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
IK G+ S + + ++ Y G + A AF+ I +P+ VAW+A I G++ G E
Sbjct: 416 DSIKRGLISYLYGESAMITMYSKCGRLDYANRAFESIDEPDTVAWTANICGHAYHGNASE 475
Query: 543 CFRMFK 560
R+F+
Sbjct: 476 ALRLFR 481
Score = 80.1 bits (196), Expect = 3e-13
Identities = 45/185 (24%), Positives = 91/185 (49%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
LL C+ ++ GK IH+++ + + ++ L+ MY C + + D M+E+
Sbjct: 94 LLETCSKVRSLSDGKLIHNHLRRTMKNPSGFLENSLLQMYLDCESFLHAEKLFDKMIEKT 153
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
SW L+ Y+Q + L+ M+ + +F+ +LK+ + + GKQIH
Sbjct: 154 LASWIILISAYSQKGHLKKTFSLYSQMVELGIRPNSTIFTRLLKSLFDPSVLEIGKQIHS 213
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
+I+ G+ ++VS T I + Y G + A+ ++ + N VAW+ ++ G +Q + ++
Sbjct: 214 LLIRTGLSTNVSVITAISNMYAKCGWLEGAKLVMGQMVEKNAVAWTGLMMGCTQADKQKD 273
Query: 543 CFRMF 557
+F
Sbjct: 274 ALELF 278
Score = 70.1 bits (170), Expect = 4e-10
Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+ C++ + ++G Q+H+ +K G + + ++ ++ MY+KCG LD + + + E +
Sbjct: 397 IFQACSVLADFNVGAQVHADSIKRGLISYLYGESAMITMYSKCGRLDYANRAFESIDEPD 456
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGK-QIH 359
+WT+ + G+ EAL LF+ M + F VL ACS SG K +
Sbjct: 457 TVAWTANICGHAYHGNASEALRLFRRMQDSGVRPNEVTFVAVLTACSHSGLVTEAKLYLE 516
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRIS-QPNEVAWSAIIAG 515
+ G+ + ++D Y G + EA + P+ ++W ++ G
Sbjct: 517 SMSREYGVRPTIDHYACMIDIYSRAGLLQEAYELIKIMPFDPDSMSWKCLLGG 569
>ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 189 bits (481), Expect = 3e-46
Identities = 90/176 (51%), Positives = 126/176 (71%)
Frame = +3
Query: 33 VDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVG 212
+D+GKQIHS +++IGF+ +ISI+T + NMY KCG+LD + + + M +NA + T LMVG
Sbjct: 208 LDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVG 267
Query: 213 YTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSD 392
YT+A+R +AL+LF M+ E ELD FVFSI+LKAC+ G+ GKQIH IKLG++S+
Sbjct: 268 YTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESE 327
Query: 393 VSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMFK 560
VS GTP+VDFYV A+ AF+ I +PN+ +WSA+IAGY Q G+ + +FK
Sbjct: 328 VSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFK 383
Score = 119 bits (299), Expect = 4e-25
Identities = 61/186 (32%), Positives = 105/186 (56%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+L C ++ GKQIHSY +K+G +++S+ T LV+ Y KC +++ + + E N
Sbjct: 299 ILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPN 358
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
SW++L+ GY Q+ + AL +FK + + L+ F+++ + +ACS + G QIH
Sbjct: 359 DFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHA 418
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
IK G+ + +S + ++ Y G + A AF I +P+ VAW+AII ++ G+ E
Sbjct: 419 DAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFE 478
Query: 543 CFRMFK 560
R+FK
Sbjct: 479 ALRLFK 484
Score = 84.7 bits (208), Expect = 1e-14
Identities = 47/172 (27%), Positives = 95/172 (55%)
Frame = +3
Query: 42 GKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVGYTQ 221
GK H+ + ++ SN ID ++ MY C S+ D +V+++ +SW++++ YT+
Sbjct: 111 GKLFHNRLQRMANSNKF-IDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTE 169
Query: 222 ASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSDVSA 401
R EA+ LF M+ + +FS ++ + ++ GKQIH +I++G +++S
Sbjct: 170 EGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISI 229
Query: 402 GTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMF 557
T I + YV G + A+ A +++++ N VA + ++ GY++ R+ + +F
Sbjct: 230 ETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLF 281
Score = 73.9 bits (180), Expect = 2e-11
Identities = 44/173 (25%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+ C+ ++ G QIH+ +K G +S ++ +++MY+KCG +D + + + +
Sbjct: 400 IFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPD 459
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
+WT+++ + + FEAL LFK M + F +L ACS SG K GK+I
Sbjct: 460 TVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILD 519
Query: 363 CII-KLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRIS-QPNEVAWSAIIAG 515
+ + G++ + ++D Y G + EA + +P+ ++W +++ G
Sbjct: 520 SMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGG 572
>ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 189 bits (480), Expect = 4e-46
Identities = 90/176 (51%), Positives = 125/176 (71%)
Frame = +3
Query: 33 VDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVG 212
+D+GKQIHS +++I F+ DISI+T + NMY KCG+LD + + + M ++A + T LMVG
Sbjct: 196 LDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVG 255
Query: 213 YTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSD 392
YTQA+R +AL+LF M+ E ELD FVFSI+LKAC+ G+ GKQIH IKLG++S+
Sbjct: 256 YTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESE 315
Query: 393 VSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMFK 560
VS GTP+VDFYV A+ AF+ I +PN+ +WSA+IAGY Q G+ + +FK
Sbjct: 316 VSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFK 371
Score = 120 bits (302), Expect = 2e-25
Identities = 61/186 (32%), Positives = 105/186 (56%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+L C ++ GKQIHSY +K+G +++S+ T LV+ Y KC +++ + + E N
Sbjct: 287 ILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPN 346
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
SW++L+ GY Q+ + AL +FK + + L+ F+++ + +ACS + G QIH
Sbjct: 347 DFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHA 406
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
IK G+ + +S + ++ Y G + A AF I +P+ VAW+AII ++ G+ E
Sbjct: 407 DAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASE 466
Query: 543 CFRMFK 560
R+FK
Sbjct: 467 ALRLFK 472
Score = 81.3 bits (199), Expect = 2e-13
Identities = 47/172 (27%), Positives = 93/172 (54%)
Frame = +3
Query: 42 GKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVGYTQ 221
GK H+ + ++ SN ID ++ MY C ++ D +V+R+ +SW +++ YT+
Sbjct: 99 GKLFHNRLQRMANSNKF-IDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTE 157
Query: 222 ASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSDVSA 401
R EA+ LF M+ + +FS ++ + ++ GKQIH +I++ +D+S
Sbjct: 158 EGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADISI 217
Query: 402 GTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMF 557
T I + YV G + A+ A +++++ + VA + ++ GY+Q R+ + +F
Sbjct: 218 ETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLF 269
Score = 74.3 bits (181), Expect = 2e-11
Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 2/173 (1%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+ C+ ++ G QIH+ +K G +S ++ ++ MY+KCG +D + + + +
Sbjct: 388 IFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPD 447
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQ-IH 359
+WT+++ + + EAL LFK M + F +L ACS SG K GKQ +
Sbjct: 448 TVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLD 507
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRIS-QPNEVAWSAIIAG 515
K G++ + ++D Y G +LEA + +P+ ++W +++ G
Sbjct: 508 SMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGG 560
>ref|XP_002512657.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548618|gb|EEF50109.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 837
Score = 189 bits (480), Expect = 4e-46
Identities = 88/174 (50%), Positives = 124/174 (71%)
Frame = +3
Query: 39 IGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVGYT 218
IGKQIHS+ ++ G +SI+T + NMY +CG+LD + L +++M E+NA +WT LMVGYT
Sbjct: 209 IGKQIHSHSIRSGLGAGVSINTAISNMYVRCGWLDGAELFINNMAEKNAVAWTGLMVGYT 268
Query: 219 QASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSDVS 398
QA +Q AL LF M+ E+ ELD +VFSI LKAC+ G+QIHG I+KLG++S+VS
Sbjct: 269 QAGKQKNALDLFAKMVCEDVELDEYVFSISLKACAGLKELSFGRQIHGHIVKLGLESEVS 328
Query: 399 AGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMFK 560
GTP+VDFY+ + A F+ IS+PN+V+WSA+I GY Q+G EE ++F+
Sbjct: 329 VGTPLVDFYIKCASFELASKVFEGISEPNDVSWSAMITGYCQIGEFEEALKIFE 382
Score = 114 bits (284), Expect = 2e-23
Identities = 56/184 (30%), Positives = 98/184 (53%)
Frame = +3
Query: 6 LHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNA 185
L C + G+QIH ++VK+G +++S+ T LV+ Y KC + ++ V + + E N
Sbjct: 299 LKACAGLKELSFGRQIHGHIVKLGLESEVSVGTPLVDFYIKCASFELASKVFEGISEPND 358
Query: 186 TSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGC 365
SW++++ GY Q EAL +F+ + L+ F ++ + +ACS ++ G Q+H
Sbjct: 359 VSWSAMITGYCQIGEFEEALKIFESLRSNIENLNSFTYTSIFQACSALADFSTGTQVHAD 418
Query: 366 IIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEEC 545
IK + + + ++ Y G + A AF+ I P+ VAW+AI+AGY+ G E
Sbjct: 419 AIKRSLIASQHGESAMITMYSRCGRLDYANLAFETIDGPDAVAWTAIVAGYAYQGNATEA 478
Query: 546 FRMF 557
+ F
Sbjct: 479 LKHF 482
Score = 84.3 bits (207), Expect = 2e-14
Identities = 48/181 (26%), Positives = 89/181 (49%)
Frame = +3
Query: 15 CTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSW 194
C ++ GK IH + + + ++ ++ MY C L+ + V D M+ERN SW
Sbjct: 100 CGNSKSLSDGKIIHELLRRTVEKPSVFLENTVLKMYCVCESLEDAYKVFDKMIERNLISW 159
Query: 195 TSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIK 374
+++ Y + +AL LF M+ + ++ +L++ GKQIH I+
Sbjct: 160 GTIISAYAEHGLLDKALSLFISMISLGINPNSSIYIDLLRSLLNPSLLGIGKQIHSHSIR 219
Query: 375 LGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRM 554
G+ + VS T I + YV G + A+ + +++ N VAW+ ++ GY+Q G+ + +
Sbjct: 220 SGLGAGVSINTAISNMYVRCGWLDGAELFINNMAEKNAVAWTGLMVGYTQAGKQKNALDL 279
Query: 555 F 557
F
Sbjct: 280 F 280
Score = 65.5 bits (158), Expect = 9e-09
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+ C+ + G Q+H+ +K ++ ++ MY++CG LD + L + + +
Sbjct: 399 IFQACSALADFSTGTQVHADAIKRSLIASQHGESAMITMYSRCGRLDYANLAFETIDGPD 458
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
A +WT+++ GY EAL F M + F VL ACS SG GKQ
Sbjct: 459 AVAWTAIVAGYAYQGNATEALKHFWRMQGSGARPNAITFIAVLTACSHSGLVAEGKQYLD 518
Query: 363 CI-IKLGMDSDVSAGTPIVDFYVNDGNILEA 452
+ K GM + ++D Y G + EA
Sbjct: 519 LMSSKYGMAPTIDHYDCVIDIYSRAGYLQEA 549
>ref|XP_006290013.1| hypothetical protein CARUB_v10003644mg [Capsella rubella]
gi|482558719|gb|EOA22911.1| hypothetical protein
CARUB_v10003644mg [Capsella rubella]
Length = 752
Score = 188 bits (477), Expect = 9e-46
Identities = 86/176 (48%), Positives = 122/176 (69%)
Frame = +3
Query: 33 VDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVG 212
+D+G+QIH+++++ G N+ SI+ ++NMY KCG+L + V D M ++ +WT LMVG
Sbjct: 200 LDVGRQIHAHVMRAGLCNNTSIEIGILNMYVKCGWLVGAKRVFDQMAQKKPVAWTGLMVG 259
Query: 213 YTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSD 392
YTQA R +AL LF +++E E D FVFS+VLKAC+ K GKQIH C+ KLG++S+
Sbjct: 260 YTQAGRARDALKLFVELVIEGVEWDSFVFSVVLKACASLEELKLGKQIHACVAKLGLESE 319
Query: 393 VSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMFK 560
VS GTP+VDFY+ + A AF IS+PN+V WSAII+GY Q+ + EE + FK
Sbjct: 320 VSVGTPLVDFYIKCSSFESACCAFQEISEPNDVTWSAIISGYCQMSQFEEAVKTFK 375
Score = 107 bits (268), Expect = 2e-21
Identities = 53/187 (28%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+L C + +GKQIH+ + K+G +++S+ T LV+ Y KC +S+ + E N
Sbjct: 291 VLKACASLEELKLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACCAFQEISEPN 350
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTE-LDPFVFSIVLKACSESGNWKAGKQIH 359
+W++++ GY Q S+ EA+ FK + +N L+ F ++ + +ACS + G Q+H
Sbjct: 351 DVTWSAIISGYCQMSQFEEAVKTFKSLRSKNAAVLNSFTYTSIFQACSVLADCNIGGQVH 410
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHE 539
IK + + ++ Y G + +A F+ + P+ VAW+A ++G++ G
Sbjct: 411 ADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFLSGHAYYGNAS 470
Query: 540 ECFRMFK 560
E R+F+
Sbjct: 471 EALRLFE 477
Score = 88.2 bits (217), Expect = 1e-15
Identities = 48/186 (25%), Positives = 97/186 (52%), Gaps = 1/186 (0%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSN-DISIDTELVNMYAKCGYLDSSALVLDHMVER 179
L C ++ G+ +H M ++ F N + + ++ MY +CG L+ + + D M +
Sbjct: 89 LFEACRNLRSLSHGRLLHDRM-RMAFENPSLLLQNCVLQMYCECGSLEDADKLFDEMPDL 147
Query: 180 NATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIH 359
NA S +++ Y + +A+ LF M+ E +++ +LK+ G+QIH
Sbjct: 148 NAVSRVTMVSAYAERGLLDKAVGLFSGMLASGDEPPSSMYTTLLKSLINPEALDVGRQIH 207
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHE 539
+++ G+ ++ S I++ YV G ++ A+ FD+++Q VAW+ ++ GY+Q GR
Sbjct: 208 AHVMRAGLCNNTSIEIGILNMYVKCGWLVGAKRVFDQMAQKKPVAWTGLMVGYTQAGRAR 267
Query: 540 ECFRMF 557
+ ++F
Sbjct: 268 DALKLF 273
Score = 70.9 bits (172), Expect = 2e-10
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+ C++ + +IG Q+H+ +K ++ L+ MY+KCG LD + V + M +
Sbjct: 393 IFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPD 452
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQ-IH 359
+WT+ + G+ EAL LF+ M+ + + F VL ACS +G + GK +
Sbjct: 453 IVAWTAFLSGHAYYGNASEALRLFEKMVSCGMKPNSITFIAVLTACSHAGLVEQGKHYLD 512
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRIS-QPNEVAWSAIIAG 515
+ K + + ++D Y G + EA + +P+ ++W ++G
Sbjct: 513 TMLRKYNVAPTIDHYDCMIDIYARAGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
>ref|XP_004310241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 837
Score = 187 bits (475), Expect = 2e-45
Identities = 92/180 (51%), Positives = 126/180 (70%), Gaps = 1/180 (0%)
Frame = +3
Query: 24 DLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVE-RNATSWTS 200
DL+++ GKQ+HSY+++ G S++T + NMY KCG+LD + LV D M E ++ +WT
Sbjct: 208 DLHLEFGKQMHSYVIRSGNGGG-SVETAIGNMYVKCGWLDGARLVFDQMGENKSVVAWTG 266
Query: 201 LMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLG 380
LMVGYT+ + E L F M+ E+ E+D FVFSIVLKAC+ AG+QIHG +KLG
Sbjct: 267 LMVGYTEDGKLGEVLESFAEMVRESVEVDDFVFSIVLKACAGLEELNAGRQIHGYSVKLG 326
Query: 381 MDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMFK 560
+DS+VS GTP+VDFYV G A+ AF RI +PN+V+WSAII+GY Q G+ EEC +F+
Sbjct: 327 LDSEVSVGTPLVDFYVKCGEFESARRAFKRIDEPNDVSWSAIISGYCQNGQFEECLEIFQ 386
Score = 122 bits (305), Expect = 8e-26
Identities = 59/185 (31%), Positives = 103/185 (55%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+L C ++ G+QIH Y VK+G +++S+ T LV+ Y KCG +S+ + E N
Sbjct: 302 VLKACAGLEELNAGRQIHGYSVKLGLDSEVSVGTPLVDFYVKCGEFESARRAFKRIDEPN 361
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
SW++++ GY Q + E L +F+ ++ + L+P++++ + +ACS + G Q+H
Sbjct: 362 DVSWSAIISGYCQNGQFEECLEIFQTLIGKGVTLNPYIYTSIFQACSAVADINFGAQVHA 421
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
IK G + + + ++ Y G + A AF+ I +P+ VAW+AII GY+ G E
Sbjct: 422 DAIKRGFVAFLYGASAMITMYSKCGRLDYAYQAFESIDKPDTVAWTAIICGYAYHGNASE 481
Query: 543 CFRMF 557
R+F
Sbjct: 482 ALRLF 486
Score = 72.0 bits (175), Expect = 9e-11
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Frame = +3
Query: 42 GKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVGYTQ 221
GK IH ++ S ++ + + MY CG L + V D M R+ SW ++ Y +
Sbjct: 113 GKFIHEWLRSTVKSPAEFLENDALKMYCDCGSLRDAQKVFDEMRGRDLVSWVIMISAYVE 172
Query: 222 ASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSDVSA 401
+ +A+ LF M+ + +F+ +LK E + + GKQ+H +I+ G + S
Sbjct: 173 SGVLSKAVGLFLDMLECGVRPNASIFTGLLKKLDEDLHLEFGKQMHSYVIRSG-NGGGSV 231
Query: 402 GTPIVDFYVNDGNILEAQNAFDRISQ-PNEVAWSAIIAGYSQLGRHEECFRMF 557
T I + YV G + A+ FD++ + + VAW+ ++ GY++ G+ E F
Sbjct: 232 ETAIGNMYVKCGWLDGARLVFDQMGENKSVVAWTGLMVGYTEDGKLGEVLESF 284
Score = 67.8 bits (164), Expect = 2e-09
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+ C+ +++ G Q+H+ +K GF + + ++ MY+KCG LD + + + + +
Sbjct: 403 IFQACSAVADINFGAQVHADAIKRGFVAFLYGASAMITMYSKCGRLDYAYQAFESIDKPD 462
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
+WT+++ GY EAL LF M + + F VL ACS SG KQ
Sbjct: 463 TVAWTAIICGYAYHGNASEALRLFSRMQNSGIKPNSVTFIAVLTACSHSGLVTEAKQYLD 522
Query: 363 CIIKL-GMDSDVSAGTPIVDFYVNDGNILEA 452
+ + ++ V ++D Y G + EA
Sbjct: 523 SMYSVYNVEPTVDHYDCMIDVYSRAGRLQEA 553
>gb|EPS68237.1| hypothetical protein M569_06531 [Genlisea aurea]
Length = 1003
Score = 186 bits (472), Expect = 3e-45
Identities = 88/177 (49%), Positives = 127/177 (71%), Gaps = 1/177 (0%)
Frame = +3
Query: 33 VDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVG 212
+++GKQIH +++K GF+++++IDT + NMYAKC ++S+ + M+E+N SWT++MVG
Sbjct: 199 LEVGKQIHCHVIKAGFTSNVAIDTAICNMYAKCRNMESAEMNFRRMLEKNTVSWTTMMVG 258
Query: 213 YTQASRQFEALVLFKHMMLE-NTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDS 389
YT A R + L MM E ++E+D FVFSI LKAC G+ G+QIHG I+K GM++
Sbjct: 259 YTLADRHVDTLKYLIEMMEERHSEVDEFVFSITLKACVALGDHSMGEQIHGMILKHGMET 318
Query: 390 DVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMFK 560
DVS GTP+VDFYV G++ A AF+RIS+PN+ +WSAI+ GYSQ G E ++FK
Sbjct: 319 DVSVGTPLVDFYVKCGSMESALRAFERISEPNDASWSAILCGYSQTGEFERGSKLFK 375
Score = 108 bits (270), Expect = 9e-22
Identities = 56/186 (30%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 LHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNA 185
L C + +G+QIH ++K G D+S+ T LV+ Y KCG ++S+ + + E N
Sbjct: 292 LKACVALGDHSMGEQIHGMILKHGMETDVSVGTPLVDFYVKCGSMESALRAFERISEPND 351
Query: 186 TSWTSLMVGYTQASRQFEALVLFKHMMLENTE-LDPFVFSIVLKACSESGNWKAGKQIHG 362
SW++++ GY+Q LFK + E++ L+ ++ V + CS ++ G Q+HG
Sbjct: 352 ASWSAILCGYSQTGEFERGSKLFKSLRSESSSLLNECTYTSVFQLCSSFADFSFGSQLHG 411
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
IK + S + ++ Y G + A F+ I +P+ VAW+AII+G + G+ E
Sbjct: 412 DAIKRALISQPQGESTLITMYAKCGFLESALRIFESIDEPDTVAWTAIISGCASHGKALE 471
Query: 543 CFRMFK 560
+F+
Sbjct: 472 ALNLFE 477
Score = 82.0 bits (201), Expect = 9e-14
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 1/184 (0%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
LL C+ ++ GK IH ++ + +V MY CG L + V D M ER
Sbjct: 90 LLEACSRLKSLHFGKLIHR---RLNDPPPRFLVNYVVQMYCDCGSLSDARKVFDEMRERA 146
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMM-LENTELDPFVFSIVLKACSESGNWKAGKQIH 359
S +L+ Y EAL +F + +N + P + VLK+ +S + GKQIH
Sbjct: 147 LGSGITLISAYADKGLTKEALEIFLQVKDSDNVVVIPTTYLSVLKSFVDSSYLEVGKQIH 206
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHE 539
+IK G S+V+ T I + Y N+ A+ F R+ + N V+W+ ++ GY+ RH
Sbjct: 207 CHVIKAGFTSNVAIDTAICNMYAKCRNMESAEMNFRRMLEKNTVSWTTMMVGYTLADRHV 266
Query: 540 ECFR 551
+ +
Sbjct: 267 DTLK 270
Score = 75.5 bits (184), Expect = 9e-12
Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 2/169 (1%)
Frame = +3
Query: 15 CTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSW 194
C+ + G Q+H +K + ++ L+ MYAKCG+L+S+ + + + E + +W
Sbjct: 397 CSSFADFSFGSQLHGDAIKRALISQPQGESTLITMYAKCGFLESALRIFESIDEPDTVAW 456
Query: 195 TSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNW-KAGKQIHGCII 371
T+++ G + EAL LF+ M + F V ACS +G +A + +
Sbjct: 457 TAIISGCASHGKALEALNLFEKMHSSGIRANEVTFVAVFTACSHAGLVDEAKRYLETMTG 516
Query: 372 KLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRIS-QPNEVAWSAIIAG 515
+ G++ ++ VD Y G + EA D + QP+ ++W +++ G
Sbjct: 517 EYGVEPNLDHYNCAVDVYARAGLLNEAMELMDSMPFQPDAMSWKSLLGG 565
>ref|XP_006844488.1| hypothetical protein AMTR_s00016p00115350 [Amborella trichopoda]
gi|548846959|gb|ERN06163.1| hypothetical protein
AMTR_s00016p00115350 [Amborella trichopoda]
Length = 396
Score = 184 bits (467), Expect = 1e-44
Identities = 87/172 (50%), Positives = 121/172 (70%)
Frame = +3
Query: 42 GKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVGYTQ 221
GKQ+HS ++K+GF D+ I+T L NMY KC LDS+ L+ D+M E+NA +WT++M GYTQ
Sbjct: 214 GKQLHSQIIKLGFIPDLLIETALCNMYIKCRELDSAKLIFDNMPEKNAVTWTAVMSGYTQ 273
Query: 222 ASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSDVSA 401
A ++ AL L++ +++ E D FVFS++LKAC+ N K GK +H I+KLGM+ +VS
Sbjct: 274 AGKEEAALALYQKILMVGNEPDGFVFSVILKACAGLNNLKFGKLVHAHILKLGMEKEVSV 333
Query: 402 GTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMF 557
GTP+VD Y G + + F RISQPNEV+WS IIAGY+Q+G EE +F
Sbjct: 334 GTPLVDMYFKCGMVEYGRQVFKRISQPNEVSWSVIIAGYAQVGDVEESLGLF 385
Score = 94.0 bits (232), Expect = 2e-17
Identities = 52/187 (27%), Positives = 96/187 (51%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
L C ++ GK H M ++ +I + L++MY+K G + + V + M +N
Sbjct: 99 LFEACGDMGSLSFGKIFHERMKRVEKEPEIFLGNHLLSMYSKLGSIVDAFQVFNEMPSKN 158
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNW-KAGKQIH 359
+ +W+ ++ ++Q EAL L M + + V+ +L+ACS S + GKQ+H
Sbjct: 159 SVTWSIMVSAFSQNGFVSEALSLLSDMNVIGISSNQSVYVSLLRACSNSPRGPEPGKQLH 218
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHE 539
IIKLG D+ T + + Y+ + A+ FD + + N V W+A+++GY+Q G+ E
Sbjct: 219 SQIIKLGFIPDLLIETALCNMYIKCRELDSAKLIFDNMPEKNAVTWTAVMSGYTQAGKEE 278
Query: 540 ECFRMFK 560
+++
Sbjct: 279 AALALYQ 285
Score = 62.4 bits (150), Expect = 7e-08
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+L C N+ GK +H++++K+G ++S+ T LV+MY KCG ++ V + + N
Sbjct: 302 ILKACAGLNNLKFGKLVHAHILKLGMEKEVSVGTPLVDMYFKCGMVEYGRQVFKRISQPN 361
Query: 183 ATSWTSLMVGYTQASRQFEALVLF 254
SW+ ++ GY Q E+L LF
Sbjct: 362 EVSWSVIIAGYAQVGDVEESLGLF 385
>ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297319442|gb|EFH49864.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 750
Score = 184 bits (466), Expect = 2e-44
Identities = 85/176 (48%), Positives = 120/176 (68%)
Frame = +3
Query: 33 VDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVG 212
+DIG+QIH+++++ G ++ SI+T +VNMY KCG+L + V D M + +WT LMVG
Sbjct: 198 LDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVG 257
Query: 213 YTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSD 392
YTQA R +AL LF ++ E E D FVFS+VLKAC+ + GKQIH C+ KLG++ +
Sbjct: 258 YTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECE 317
Query: 393 VSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMFK 560
VS GTP+VDFY+ + A AF I +PN+V+WSAII+GY Q+ + EE + FK
Sbjct: 318 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFK 373
Score = 105 bits (263), Expect = 6e-21
Identities = 55/187 (29%), Positives = 97/187 (51%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+L C + GKQIH+ + K+G ++S+ T LV+ Y KC +S+ + E N
Sbjct: 289 VLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 348
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLEN-TELDPFVFSIVLKACSESGNWKAGKQIH 359
SW++++ GY Q S+ EA+ FK + +N L+ F ++ + +ACS + G Q+H
Sbjct: 349 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVH 408
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHE 539
IK + + ++ Y G + +A F+ + P+ VAW+A I+G++ G
Sbjct: 409 ADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNAS 468
Query: 540 ECFRMFK 560
E R+F+
Sbjct: 469 EALRLFE 475
Score = 92.0 bits (227), Expect = 9e-17
Identities = 51/186 (27%), Positives = 99/186 (53%), Gaps = 1/186 (0%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSN-DISIDTELVNMYAKCGYLDSSALVLDHMVER 179
L C ++ G+ +H+ M ++G N + + ++ MY +CG L+ + + D M +
Sbjct: 87 LFEACRELRSLSHGRLLHNRM-RMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDL 145
Query: 180 NATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIH 359
NA S T+++ Y + +A+ LF M+ + +++ +LK+ G+QIH
Sbjct: 146 NAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIH 205
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHE 539
+I+ G+ S+ S T IV+ YV G ++ A+ FD+++ VAW+ ++ GY+Q GR
Sbjct: 206 AHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRAR 265
Query: 540 ECFRMF 557
+ ++F
Sbjct: 266 DALKLF 271
Score = 70.9 bits (172), Expect = 2e-10
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+ C++ + +IG Q+H+ +K ++ L+ MY+KCG LD + V + M +
Sbjct: 391 IFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPD 450
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQ-IH 359
+WT+ + G+ EAL LF+ M+ + + F VL ACS +G + GK +
Sbjct: 451 IVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLD 510
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRIS-QPNEVAWSAIIAG 515
+ K + + ++D Y G + EA + +P+ ++W ++G
Sbjct: 511 TMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSG 563
>gb|ESW29077.1| hypothetical protein PHAVU_002G041500g [Phaseolus vulgaris]
Length = 765
Score = 183 bits (464), Expect = 3e-44
Identities = 86/176 (48%), Positives = 124/176 (70%)
Frame = +3
Query: 33 VDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVG 212
+D+GKQIHS++++IG + DISI+T + NMY KC +LD + + ++ M +N + T LMVG
Sbjct: 208 LDLGKQIHSHLIRIGSAADISIETLISNMYVKCRWLDGAEVCINKMTRKNVVACTGLMVG 267
Query: 213 YTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSD 392
YT+A+R +A++LF M+ E ELD FVFSIVLKAC+ G+ G++IH IKLG++S+
Sbjct: 268 YTRAARHTDAMLLFAKMISEGAELDEFVFSIVLKACAALGDLYTGRKIHSYCIKLGLESE 327
Query: 393 VSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMFK 560
VS GTP+VDFYV A+ AF+ I +PN+ +WSA+I GY Q GR + +FK
Sbjct: 328 VSVGTPLVDFYVKCARFDAARRAFETICEPNDYSWSALIVGYCQSGRFDTALEVFK 383
Score = 122 bits (306), Expect = 6e-26
Identities = 62/186 (33%), Positives = 106/186 (56%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+L C ++ G++IHSY +K+G +++S+ T LV+ Y KC D++ + + E N
Sbjct: 299 VLKACAALGDLYTGRKIHSYCIKLGLESEVSVGTPLVDFYVKCARFDAARRAFETICEPN 358
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
SW++L+VGY Q+ R AL +FK + + L+ F+++ + +ACS + G QIH
Sbjct: 359 DYSWSALIVGYCQSGRFDTALEVFKTLRSKGVLLNSFIYTNMFQACSGLSDLICGSQIHA 418
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
IK G+ S +S + ++ Y G + A AF I +P+ +AW+AII ++ G+ E
Sbjct: 419 DAIKKGLVSFLSGESAMITMYSKCGKVDYAHQAFLTIDKPDTIAWTAIICAHAYHGKASE 478
Query: 543 CFRMFK 560
R+FK
Sbjct: 479 ALRLFK 484
Score = 84.3 bits (207), Expect = 2e-14
Identities = 47/172 (27%), Positives = 92/172 (53%)
Frame = +3
Query: 42 GKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVGYTQ 221
G+ HS + +I SN ID ++ M+ C ++ D MV+R+ SW +++ YT+
Sbjct: 111 GRLFHSRLQRISNSNRF-IDNCILQMHCDCKSFAAAERFFDKMVDRDLFSWATIISAYTK 169
Query: 222 ASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSDVSA 401
+EA+ L HM+ + + +FS ++ + ++ GKQIH +I++G +D+S
Sbjct: 170 EGHTYEAVRLLLHMLDLGIKPNFSIFSTLIMSFADPSMLDLGKQIHSHLIRIGSAADISI 229
Query: 402 GTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMF 557
T I + YV + A+ +++++ N VA + ++ GY++ RH + +F
Sbjct: 230 ETLISNMYVKCRWLDGAEVCINKMTRKNVVACTGLMVGYTRAARHTDAMLLF 281
Score = 73.2 bits (178), Expect = 4e-11
Identities = 43/160 (26%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Frame = +3
Query: 42 GKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVGYTQ 221
G QIH+ +K G + +S ++ ++ MY+KCG +D + + + + +WT+++ +
Sbjct: 413 GSQIHADAIKKGLVSFLSGESAMITMYSKCGKVDYAHQAFLTIDKPDTIAWTAIICAHAY 472
Query: 222 ASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQ-IHGCIIKLGMDSDVS 398
+ EAL LFK M + + F +L ACS SG K GKQ + K G++ +
Sbjct: 473 HGKASEALRLFKEMQGSGVKPNAITFIGLLNACSHSGLVKEGKQFLDSMSDKYGVNPIID 532
Query: 399 AGTPIVDFYVNDGNILEAQNAFDRIS-QPNEVAWSAIIAG 515
++D Y G + EA+ + +P+ ++W +++ G
Sbjct: 533 HYNCMIDIYSRAGMLQEAREMIRSLPLEPDVLSWKSLLGG 572
>ref|XP_006399818.1| hypothetical protein EUTSA_v10012768mg [Eutrema salsugineum]
gi|557100908|gb|ESQ41271.1| hypothetical protein
EUTSA_v10012768mg [Eutrema salsugineum]
Length = 750
Score = 180 bits (456), Expect = 2e-43
Identities = 81/176 (46%), Positives = 119/176 (67%)
Frame = +3
Query: 33 VDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVG 212
+DIG+Q+H ++++ G ++ SI+ ++NMY KCG+L + LV D M + + +WT LM+G
Sbjct: 198 LDIGRQVHGHVIRAGLCSNPSIEAGILNMYVKCGWLVGAKLVFDQMAVKKSVAWTGLMIG 257
Query: 213 YTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSD 392
YTQA R +AL LF + E D FVFS+VLK+C+ GKQIH C+ KLG++S+
Sbjct: 258 YTQAGRSRDALKLFADFVSEGGNWDNFVFSVVLKSCASLEEINLGKQIHACVAKLGLESE 317
Query: 393 VSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMFK 560
VS GTP+VDFY+ + A AF++I +PN+V WSAII+GY Q+ + EE + FK
Sbjct: 318 VSVGTPLVDFYIKCSSFESACRAFEKICEPNDVTWSAIISGYCQMSQFEEAIKTFK 373
Score = 109 bits (273), Expect = 4e-22
Identities = 53/187 (28%), Positives = 101/187 (54%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+L C +++GKQIH+ + K+G +++S+ T LV+ Y KC +S+ + + E N
Sbjct: 289 VLKSCASLEEINLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFEKICEPN 348
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTE-LDPFVFSIVLKACSESGNWKAGKQIH 359
+W++++ GY Q S+ EA+ FK + +N L+ F ++ + +ACS + G Q+H
Sbjct: 349 DVTWSAIISGYCQMSQFEEAIKTFKSLRSKNAAVLNSFTYTSIFQACSVLADCNIGGQVH 408
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHE 539
IK + + ++ Y G + +A F+ + P+ VAW+A I+G++ G
Sbjct: 409 ADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNAS 468
Query: 540 ECFRMFK 560
E ++F+
Sbjct: 469 EALKLFE 475
Score = 86.7 bits (213), Expect = 4e-15
Identities = 49/186 (26%), Positives = 93/186 (50%), Gaps = 1/186 (0%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSN-DISIDTELVNMYAKCGYLDSSALVLDHMVER 179
L C ++ G+ +H M + F N + + ++ MY CG L+ + + D M E
Sbjct: 87 LFEACRESRSLSHGRLLHHRM-RTAFENPSVLLQNCVLQMYCGCGSLEDADKLFDEMPEL 145
Query: 180 NATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIH 359
N S +++ Y + +A+ LF M+ V++ +LK+ G+Q+H
Sbjct: 146 NTVSRVTMISAYAEQGLLEKAVGLFSGMLESGDSPTSSVYTTLLKSLVNPSALDIGRQVH 205
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHE 539
G +I+ G+ S+ S I++ YV G ++ A+ FD+++ VAW+ ++ GY+Q GR
Sbjct: 206 GHVIRAGLCSNPSIEAGILNMYVKCGWLVGAKLVFDQMAVKKSVAWTGLMIGYTQAGRSR 265
Query: 540 ECFRMF 557
+ ++F
Sbjct: 266 DALKLF 271
Score = 69.3 bits (168), Expect = 6e-10
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+ C++ + +IG Q+H+ +K ++ L+ MY+KCG LD + V + M +
Sbjct: 391 IFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPD 450
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQ-IH 359
+WT+ + G+ EAL LF+ M+ + + F VL ACS +G GK +
Sbjct: 451 IVAWTAFISGHAYYGNASEALKLFEKMVSCGMKPNSVTFIAVLTACSHAGLVAQGKDYLD 510
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRIS-QPNEVAWSAIIAG 515
+ K + + ++D Y G + EA + +P+ ++W ++G
Sbjct: 511 TMLRKYNVAPTIDHYDCMIDIYSRAGLLDEALKFMKNMPFEPDSMSWKCFLSG 563
>ref|NP_196831.1| protein required for accD RNA editing 1 [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis
thaliana] gi|332004490|gb|AED91873.1| protein required
for accD RNA editing 1 [Arabidopsis thaliana]
Length = 752
Score = 179 bits (453), Expect = 5e-43
Identities = 84/176 (47%), Positives = 118/176 (67%)
Frame = +3
Query: 33 VDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVG 212
+D G+QIH+++++ G ++ SI+T +VNMY KCG+L + V D M + + T LMVG
Sbjct: 200 LDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVG 259
Query: 213 YTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSD 392
YTQA R +AL LF ++ E E D FVFS+VLKAC+ GKQIH C+ KLG++S+
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 393 VSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMFK 560
VS GTP+VDFY+ + A AF I +PN+V+WSAII+GY Q+ + EE + FK
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFK 375
Score = 110 bits (274), Expect = 3e-22
Identities = 55/187 (29%), Positives = 100/187 (53%), Gaps = 1/187 (0%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+L C +++GKQIH+ + K+G +++S+ T LV+ Y KC +S+ + E N
Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 350
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTE-LDPFVFSIVLKACSESGNWKAGKQIH 359
SW++++ GY Q S+ EA+ FK + +N L+ F ++ + +ACS + G Q+H
Sbjct: 351 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVH 410
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHE 539
IK + + ++ Y G + +A F+ + P+ VAW+A I+G++ G
Sbjct: 411 ADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNAS 470
Query: 540 ECFRMFK 560
E R+F+
Sbjct: 471 EALRLFE 477
Score = 84.0 bits (206), Expect = 2e-14
Identities = 50/186 (26%), Positives = 96/186 (51%), Gaps = 1/186 (0%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSN-DISIDTELVNMYAKCGYLDSSALVLDHMVER 179
L C ++ G+ +H M ++G N + + ++ MY +C L+ + + D M E
Sbjct: 89 LFEACRELRSLSHGRLLHDRM-RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSEL 147
Query: 180 NATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIH 359
NA S T+++ Y + +A+ LF M+ + +++ +LK+ G+QIH
Sbjct: 148 NAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIH 207
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHE 539
+I+ G+ S+ S T IV+ YV G ++ A+ FD+++ VA + ++ GY+Q GR
Sbjct: 208 AHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRAR 267
Query: 540 ECFRMF 557
+ ++F
Sbjct: 268 DALKLF 273
Score = 70.9 bits (172), Expect = 2e-10
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+ C++ + +IG Q+H+ +K ++ L+ MY+KCG LD + V + M +
Sbjct: 393 IFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPD 452
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQ-IH 359
+WT+ + G+ EAL LF+ M+ + + F VL ACS +G + GK +
Sbjct: 453 IVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLD 512
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRIS-QPNEVAWSAIIAG 515
+ K + + ++D Y G + EA + +P+ ++W ++G
Sbjct: 513 TMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
>ref|XP_006368854.1| hypothetical protein POPTR_0001s13120g [Populus trichocarpa]
gi|550347141|gb|ERP65423.1| hypothetical protein
POPTR_0001s13120g [Populus trichocarpa]
Length = 655
Score = 170 bits (431), Expect = 2e-40
Identities = 82/176 (46%), Positives = 119/176 (67%)
Frame = +3
Query: 33 VDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVG 212
++IGKQIHS+ ++ G ++ S++T + NMY KCG+L+ + LV + M E+NA +WT +MVG
Sbjct: 201 LEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVG 260
Query: 213 YTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSD 392
YTQA RQ +AL LF M+ E ELD +VFSIVLKAC+ G+QIHG I+KLG++S+
Sbjct: 261 YTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESE 320
Query: 393 VSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMFK 560
VS+ ++ Y G + A F+ I P+ VAW+AIIAGY+ G E ++F+
Sbjct: 321 VSSA--MITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFR 374
Score = 90.9 bits (224), Expect = 2e-16
Identities = 49/172 (28%), Positives = 86/172 (50%)
Frame = +3
Query: 42 GKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMVGYTQ 221
G+ H M + + ++ ++ MY KCG L + V D M ERN SW +++ Y +
Sbjct: 103 GRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAE 162
Query: 222 ASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDSDVSA 401
+ +F +M+ T+ + + L++ + GKQIH I+ G+ S+ S
Sbjct: 163 NGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASV 222
Query: 402 GTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEECFRMF 557
T I + YV G + A+ F+++S+ N VAW+ I+ GY+Q R + +F
Sbjct: 223 NTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALF 274
Score = 80.9 bits (198), Expect = 2e-13
Identities = 48/173 (27%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+L C ++ G+QIH ++VK+G +++S + ++ MY++CG LD + V + + + +
Sbjct: 292 VLKACAGLEELNFGRQIHGHIVKLGLESEVS--SAMITMYSRCGRLDYATRVFESIDDPD 349
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQ-IH 359
A +WT+++ GY EAL LF+ M + F VL ACS SG G+Q +
Sbjct: 350 AVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLE 409
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRIS-QPNEVAWSAIIAG 515
G+ + + +VD Y G + EA + P+ ++W ++ G
Sbjct: 410 SMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 462
>ref|XP_001785140.1| predicted protein [Physcomitrella patens]
gi|162663262|gb|EDQ50036.1| predicted protein
[Physcomitrella patens]
Length = 922
Score = 146 bits (369), Expect = 3e-33
Identities = 66/186 (35%), Positives = 113/186 (60%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+L C + ++ G+QIHS++ K G+ +D+++ T L+NMY KCG L+ + V + M ERN
Sbjct: 158 ILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERN 217
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
SWT+++ GY Q EA VLF+ ++ T+ + F+ +L AC+ + + G ++H
Sbjct: 218 VVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHA 277
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
I + G++ +V G ++ Y G++ A+ FD + PN V+W+A+IAGY + G EE
Sbjct: 278 YIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEE 336
Query: 543 CFRMFK 560
FR+F+
Sbjct: 337 AFRLFR 342
Score = 117 bits (293), Expect = 2e-24
Identities = 53/186 (28%), Positives = 108/186 (58%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+L CT +++ G ++H+Y+ + G ++ + L++MYA+CG L ++ V D++ N
Sbjct: 259 ILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPN 318
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
SW +++ GY + + EA LF+ M + + D F ++ +L C++ + GK++H
Sbjct: 319 RVSWNAMIAGYGEGFME-EAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHS 377
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
I++ ++DV+ T ++ Y G++ EA+ F+++ + N V+W+A IA + G +E
Sbjct: 378 QIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKE 437
Query: 543 CFRMFK 560
F++FK
Sbjct: 438 AFQVFK 443
Score = 113 bits (282), Expect = 4e-23
Identities = 59/185 (31%), Positives = 102/185 (55%)
Frame = +3
Query: 6 LHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNA 185
L C ++ GK++H +M F DI ++ L++MY+KCG ++ + V M +++
Sbjct: 58 LQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDV 117
Query: 186 TSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGC 365
SW +++ GY R EA+ LF M E + + F +L AC + G+QIH
Sbjct: 118 VSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSH 177
Query: 366 IIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEEC 545
I K G +SDV+ T +++ Y G++ A+ F+ + + N V+W+A+I+GY Q G +E
Sbjct: 178 ITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEA 237
Query: 546 FRMFK 560
F +F+
Sbjct: 238 FVLFQ 242
Score = 108 bits (271), Expect = 7e-22
Identities = 57/185 (30%), Positives = 102/185 (55%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
LL C +++ GK++HS +V+ + D+++ T L++MYAKCG L+ + V + M E+N
Sbjct: 359 LLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKN 418
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
A SW + + + + EA +FK M ++ D F +L +C+ +++ G+ IHG
Sbjct: 419 AVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHG 478
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
I + GM S+ ++ Y G + +A+ F RI + + +W+A+IA Y Q G +
Sbjct: 479 KIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGS 538
Query: 543 CFRMF 557
F +F
Sbjct: 539 AFDLF 543
Score = 94.7 bits (234), Expect = 1e-17
Identities = 48/186 (25%), Positives = 95/186 (51%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
LL+ CT + + G+ IH + + G ++ + L++MY +CG L + V + R+
Sbjct: 460 LLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRD 519
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
SW +++ Y Q A LF E + D + F VL+A + + AG++IHG
Sbjct: 520 LGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHG 579
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
+ K G++ D+ T ++ Y G++ +A + F + + + V W+A++A Y+ ++
Sbjct: 580 LVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQD 639
Query: 543 CFRMFK 560
++F+
Sbjct: 640 ALKLFQ 645
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Frame = +3
Query: 30 NVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERNATSWTSLMV 209
++D G++IH + K G DI I T L+ MY+KCG L + V ++ E++ W +++
Sbjct: 570 DLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLA 629
Query: 210 GYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHGCIIKLGMDS 389
Y + +AL LF+ M LE D ++ VL AC+ G + GK+ H + + M++
Sbjct: 630 AYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKKFHTQLKEAAMET 689
Query: 390 DVSAGTPIVDFYVNDGNILEAQNAFDRISQPNE-VAWSAII 509
D +V + EA+ + IS ++ + W +++
Sbjct: 690 DTRHYACMVAALGRASLLKEAEEFIEEISSESDALMWESLL 730
>ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 141 bits (355), Expect = 1e-31
Identities = 69/185 (37%), Positives = 106/185 (57%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
LL CT + GK +H +++ F +D+ I L+ MYA+CG L+ + + D M R+
Sbjct: 80 LLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRD 139
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
SWTS++ GY Q R +AL+LF M+ + E + F S ++K C ++ G+QIH
Sbjct: 140 MVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHA 199
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
C K G S+V G+ +VD Y G + EA FD++ NEV+W+A+IAGY++ G EE
Sbjct: 200 CCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEE 259
Query: 543 CFRMF 557
+F
Sbjct: 260 ALALF 264
Score = 110 bits (275), Expect = 2e-22
Identities = 57/185 (30%), Positives = 99/185 (53%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
L+ C + + G+QIH+ K G +++ + + LV+MYA+CGYL + LV D + +N
Sbjct: 181 LVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKN 240
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
SW +L+ GY + EAL LF M E F +S +L +CS G + GK +H
Sbjct: 241 EVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHA 300
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
++K G ++ Y G+I +A+ FD++ + + V+ ++++ GY+Q G +E
Sbjct: 301 HLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKE 360
Query: 543 CFRMF 557
+ F
Sbjct: 361 AAQQF 365
Score = 68.2 bits (165), Expect = 1e-09
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 1/181 (0%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
LL C+ ++ GK +H++++K + L++MYAK G + + V D +V+ +
Sbjct: 282 LLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVD 341
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
S S+++GY Q EA F M+ E + F VL ACS + GK G
Sbjct: 342 VVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFG 401
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRIS-QPNEVAWSAIIAGYSQLGRHE 539
+ K ++ VS IVD G + +A++ + + +P W A++ G S++ ++
Sbjct: 402 LMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALL-GASKMHKNT 460
Query: 540 E 542
E
Sbjct: 461 E 461
>gb|ABR16216.1| unknown [Picea sitchensis]
Length = 394
Score = 138 bits (348), Expect = 8e-31
Identities = 66/186 (35%), Positives = 109/186 (58%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+L+ C ++ GK I+ ++ G D+ ++ L+NM+ KCG ++ + V D M ERN
Sbjct: 119 VLNACARLASLSEGKLIYDEIISKGCEMDVIVENALINMFMKCGSIEDARRVFDKMCERN 178
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSIVLKACSESGNWKAGKQIHG 362
SWT+++ GY Q EAL +F M E+ + + + VL AC++ + + GK+IHG
Sbjct: 179 LVSWTAMVSGYAQGGFADEALRMFYEMQGEDVKANYVTVASVLPACAQLSDLQQGKEIHG 238
Query: 363 CIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHEE 542
II+ G+D + G ++D Y G+I AQ FD++ Q + V+W+ IAGY+Q GR +E
Sbjct: 239 YIIRRGLDLGIVVGNALIDMYAKCGSIGSAQKVFDKMLQRDVVSWNVAIAGYAQNGRFDE 298
Query: 543 CFRMFK 560
C +F+
Sbjct: 299 CMELFR 304
Score = 120 bits (301), Expect = 2e-25
Identities = 62/186 (33%), Positives = 106/186 (56%), Gaps = 1/186 (0%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
LLH CT + KQ+H++M+ G S++T+L+N+Y KCG L + L D+M + +
Sbjct: 17 LLHLCTKAKTLAEAKQVHAHMLLTGILRIPSVETKLLNLYVKCGSLPDARLAFDNMTKGD 76
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMM-LENTELDPFVFSIVLKACSESGNWKAGKQIH 359
W ++ GY + EAL L+ M + +T D + +S VL AC+ + GK I+
Sbjct: 77 VFPWNVMIGGYVKHGETREALELYHQMQKVSSTNPDNYTYSSVLNACARLASLSEGKLIY 136
Query: 360 GCIIKLGMDSDVSAGTPIVDFYVNDGNILEAQNAFDRISQPNEVAWSAIIAGYSQLGRHE 539
II G + DV +++ ++ G+I +A+ FD++ + N V+W+A+++GY+Q G +
Sbjct: 137 DEIISKGCEMDVIVENALINMFMKCGSIEDARRVFDKMCERNLVSWTAMVSGYAQGGFAD 196
Query: 540 ECFRMF 557
E RMF
Sbjct: 197 EALRMF 202
Score = 73.6 bits (179), Expect = 3e-11
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 35/174 (20%)
Frame = +3
Query: 3 LLHGCTIDLNVDIGKQIHSYMVKIGFSNDISIDTELVNMYAKCGYLDSSALVLDHMVERN 182
+L C ++ GK+IH Y+++ G I + L++MYAKCG + S+ V D M++R+
Sbjct: 220 VLPACAQLSDLQQGKEIHGYIIRRGLDLGIVVGNALIDMYAKCGSIGSAQKVFDKMLQRD 279
Query: 183 ATSWTSLMVGYTQASRQFEALVLFKHMMLENTELDPFVFSI------------------- 305
SW + GY Q R E + LF+ M ++D ++
Sbjct: 280 VVSWNVAIAGYAQNGRFDECMELFRKMQCAGLKIDVITWNTLITAYAQNGYGDQTLELFQ 339
Query: 306 ----------------VLKACSESGNWKAGKQIHGCIIKLGMDSDVSAGTPIVD 419
VL AC+ + GK+IH + + SD+ G ++D
Sbjct: 340 QMQLRGVKPNSITIASVLSACAAVSALQEGKRIHDLVNRSECKSDICVGNALID 393