BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00052339
         (400 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]    144   9e-33
ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containi...   139   3e-31
gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]        138   7e-31
ref|XP_004966668.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   136   2e-30
gb|EMT04085.1| hypothetical protein F775_02789 [Aegilops tauschii]    135   4e-30
ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [S...   134   1e-29
ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group] g...   132   6e-29
emb|CBI27249.3| unnamed protein product [Vitis vinifera]              129   5e-28
ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containi...   129   5e-28
ref|XP_006656717.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
gb|EOY01788.1| Pentatricopeptide repeat superfamily protein [The...   123   3e-26
ref|XP_006483071.1| PREDICTED: pentatricopeptide repeat-containi...   122   5e-26
ref|XP_006483070.1| PREDICTED: pentatricopeptide repeat-containi...   122   5e-26
ref|XP_006438781.1| hypothetical protein CICLE_v10033606mg [Citr...   122   5e-26
ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|XP_002316102.2| pentatricopeptide repeat-containing family p...   116   3e-24
gb|EMJ28156.1| hypothetical protein PRUPE_ppa002695mg [Prunus pe...   115   5e-24
ref|XP_004298396.1| PREDICTED: pentatricopeptide repeat-containi...   115   8e-24
gb|ESW30612.1| hypothetical protein PHAVU_002G167800g [Phaseolus...   114   1e-23
ref|NP_178437.1| pentatricopeptide repeat-containing protein [Ar...   114   1e-23

>dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 673

 Score =  144 bits (364), Expect = 9e-33
 Identities = 64/100 (64%), Positives = 80/100 (80%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAG LEEA EFI +MP+ AD ++WGA LHGC++H R E GE  + RMM L P++PD+YV
Sbjct: 573 ARAGNLEEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMVLHPDKPDFYV 632

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCSSFGIEN 301
           LMSNLY S GRWD++L +R+LM+E GLVK PGCSS G+EN
Sbjct: 633 LMSNLYTSYGRWDKSLAIRRLMQERGLVKLPGCSSVGLEN 672


>ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Brachypodium distachyon]
          Length = 678

 Score =  139 bits (351), Expect = 3e-31
 Identities = 64/100 (64%), Positives = 78/100 (78%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAG LEEA EFI +MP+QADT++W A LHGC++H R E  E  V RMM L P+ PD+ V
Sbjct: 578 ARAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRMMVLHPDTPDFCV 637

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCSSFGIEN 301
           +MSNLY S GRWD++L +RKLM+E GLVK PGCSS G+EN
Sbjct: 638 MMSNLYTSYGRWDKSLAIRKLMKERGLVKLPGCSSVGLEN 677


>gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
          Length = 716

 Score =  138 bits (348), Expect = 7e-31
 Identities = 63/100 (63%), Positives = 76/100 (76%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAG LE+A EFID MP+QADT+VWGA LHGC +H R +  E  ++RMM L P RPD YV
Sbjct: 616 ARAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYV 675

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCSSFGIEN 301
           L+SNLY S G WD++L +R+ M+E GLVK PGCSS G EN
Sbjct: 676 LISNLYTSNGMWDKSLAIRRWMQEKGLVKLPGCSSVGHEN 715


>ref|XP_004966668.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g03380, mitochondrial-like [Setaria italica]
          Length = 691

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/100 (62%), Positives = 77/100 (77%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAG LE+A EFID+MP+QAD +VWGA LHGC +H R + GE  ++RMM L P RPD YV
Sbjct: 591 ARAGNLEQALEFIDKMPMQADVSVWGAFLHGCGLHSRLQFGEEAIKRMMVLHPERPDLYV 650

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCSSFGIEN 301
           L+SNLY S G W+++L +R+ M+E GLVK PGCSS G EN
Sbjct: 651 LISNLYTSYGMWEKSLAIRRWMQEKGLVKLPGCSSVGPEN 690


>gb|EMT04085.1| hypothetical protein F775_02789 [Aegilops tauschii]
          Length = 392

 Score =  135 bits (341), Expect = 4e-30
 Identities = 61/100 (61%), Positives = 77/100 (77%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           +RAG LEEA +FI +MP+QAD +VWGA LHGC++H R E GE  + RMM   P+ P +YV
Sbjct: 292 SRAGNLEEALDFIQKMPMQADISVWGAFLHGCKLHSRLEFGEEAINRMMVPHPDTPAFYV 351

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCSSFGIEN 301
           LMSNLY S GRWD++L +R+ M+E GLVK PGCSS G+EN
Sbjct: 352 LMSNLYTSYGRWDKSLAIRRSMQERGLVKLPGCSSVGLEN 391


>ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
           gi|241914836|gb|EER87980.1| hypothetical protein
           SORBIDRAFT_10g005800 [Sorghum bicolor]
          Length = 683

 Score =  134 bits (337), Expect = 1e-29
 Identities = 62/100 (62%), Positives = 75/100 (75%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAG LEEA EFID MP+QADT+VWGA LHGC +H R + GE  ++RMM L P RPD YV
Sbjct: 583 ARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYV 642

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCSSFGIEN 301
           L+SNLY S G W+++  +R+ M+E GLVK PG SS G EN
Sbjct: 643 LISNLYTSNGMWEKSQAIRRWMQEKGLVKLPGYSSIGREN 682


>ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
           gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza
           sativa Japonica Group] gi|125596287|gb|EAZ36067.1|
           hypothetical protein OsJ_20377 [Oryza sativa Japonica
           Group]
          Length = 673

 Score =  132 bits (331), Expect = 6e-29
 Identities = 60/100 (60%), Positives = 74/100 (74%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAG LEEA EFI  MPI+A  +VWG+ LHGC++H R E GE  +++M  L P  PD+YV
Sbjct: 573 ARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKMAALHPETPDFYV 632

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCSSFGIEN 301
           LMSNLY S GRWD++  +R+ M+E GLVK PGCSS G EN
Sbjct: 633 LMSNLYTSYGRWDKSQTIRRWMQEQGLVKLPGCSSVGHEN 672


>emb|CBI27249.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  129 bits (323), Expect = 5e-28
 Identities = 64/109 (58%), Positives = 83/109 (76%), Gaps = 2/109 (1%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAGRLEEA +FI+++PIQ D ++ GA LHGCR+H RF+LGEV VRRM+ L P++  YYV
Sbjct: 589 ARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYV 648

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCSSFGIE--NQFNTTVM 322
           LMSNLYASEGRW +A +V +LM++ GL K PG S   IE  N F+  ++
Sbjct: 649 LMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLVDIETSNDFSPLIV 697


>ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
           gi|147818711|emb|CAN65040.1| hypothetical protein
           VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  129 bits (323), Expect = 5e-28
 Identities = 64/109 (58%), Positives = 83/109 (76%), Gaps = 2/109 (1%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAGRLEEA +FI+++PIQ D ++ GA LHGCR+H RF+LGEV VRRM+ L P++  YYV
Sbjct: 588 ARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYV 647

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCSSFGIE--NQFNTTVM 322
           LMSNLYASEGRW +A +V +LM++ GL K PG S   IE  N F+  ++
Sbjct: 648 LMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLVDIETSNDFSPLIV 696


>ref|XP_006656717.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Oryza brachyantha]
          Length = 612

 Score =  124 bits (312), Expect = 1e-26
 Identities = 56/100 (56%), Positives = 73/100 (73%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAG LEEA EFI  MP++A  +VWG+ LHGC++H R E GE  ++++  L P  PD+ V
Sbjct: 512 ARAGNLEEALEFIQNMPMKASISVWGSFLHGCKLHSRLEFGEEAIKKLAGLHPETPDFCV 571

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCSSFGIEN 301
           LMSNLY S GRWD++  +R+ M+E GLVK PGCSS G +N
Sbjct: 572 LMSNLYNSYGRWDKSQNIRRWMQEQGLVKLPGCSSIGHDN 611


>gb|EOY01788.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
          Length = 714

 Score =  123 bits (308), Expect = 3e-26
 Identities = 56/94 (59%), Positives = 75/94 (79%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAGRLEEA +FID++PIQ D +++GA LHGC +H RF+LGEV +++M+ L P+R  YYV
Sbjct: 602 ARAGRLEEAWDFIDKLPIQPDLSLFGAFLHGCGLHSRFDLGEVAIKKMLDLHPDRGCYYV 661

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCS 283
           L+SNLYAS+GRW +  +VR+LM+  GL K P CS
Sbjct: 662 LISNLYASDGRWTQVNQVRELMKHRGLSKDPACS 695


>ref|XP_006483071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 597

 Score =  122 bits (306), Expect = 5e-26
 Identities = 55/100 (55%), Positives = 79/100 (79%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAGRLEEA EF++ MPI+ D +++GA LHGC ++ RF+LGEV++++M+ L P++  YYV
Sbjct: 485 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 544

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCSSFGIEN 301
           L+SNLYAS+GRW    +VR+LM++ GL K PGCS   ++N
Sbjct: 545 LVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDN 584


>ref|XP_006483070.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 709

 Score =  122 bits (306), Expect = 5e-26
 Identities = 55/100 (55%), Positives = 79/100 (79%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAGRLEEA EF++ MPI+ D +++GA LHGC ++ RF+LGEV++++M+ L P++  YYV
Sbjct: 597 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 656

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCSSFGIEN 301
           L+SNLYAS+GRW    +VR+LM++ GL K PGCS   ++N
Sbjct: 657 LVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDN 696


>ref|XP_006438781.1| hypothetical protein CICLE_v10033606mg [Citrus clementina]
           gi|557540977|gb|ESR52021.1| hypothetical protein
           CICLE_v10033606mg [Citrus clementina]
          Length = 716

 Score =  122 bits (306), Expect = 5e-26
 Identities = 55/100 (55%), Positives = 79/100 (79%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAGRLEEA EF++ MPI+ D +++GA LHGC ++ RF+LGEV++++M+ L P++  YYV
Sbjct: 597 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 656

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCSSFGIEN 301
           L+SNLYAS+GRW    +VR+LM++ GL K PGCS   ++N
Sbjct: 657 LVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDN 696


>ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Glycine max]
          Length = 699

 Score =  117 bits (292), Expect = 2e-24
 Identities = 54/101 (53%), Positives = 75/101 (74%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAG LEEA +FI+RMP+Q   +V+GA LHGC +H RFELG   +++M+ L P+   YYV
Sbjct: 588 ARAGNLEEALDFIERMPVQPSVSVFGAFLHGCGLHSRFELGGAAIKKMLELHPDEACYYV 647

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCSSFGIENQ 304
           L+SNLYAS+GRW    +VR+++++ GL K PGCSS  ++ Q
Sbjct: 648 LVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSSVEMDLQ 688


>ref|XP_002316102.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550329982|gb|EEF02273.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 665

 Score =  116 bits (290), Expect = 3e-24
 Identities = 51/94 (54%), Positives = 72/94 (76%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAGRL+EA +FI +MP++ D +++GA LHGC +H RF+LGE+ ++RM+ L P    YYV
Sbjct: 553 ARAGRLKEALDFIQKMPVKPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHPGEACYYV 612

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCS 283
           LM NLYAS+  W +  +VR+LM++ GL+K PGCS
Sbjct: 613 LMCNLYASDASWSKVKQVRELMKQRGLMKTPGCS 646


>gb|EMJ28156.1| hypothetical protein PRUPE_ppa002695mg [Prunus persica]
          Length = 644

 Score =  115 bits (289), Expect = 5e-24
 Identities = 53/89 (59%), Positives = 71/89 (79%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAG+LEEA EFI+RMP+Q D +++GA LHGC ++ RF+LGE  +RRM+ L P+   YYV
Sbjct: 532 ARAGKLEEALEFIERMPVQPDVSLFGAFLHGCGLYSRFDLGEAAIRRMLELHPDEACYYV 591

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVK 268
           LMSNLYAS+GRW +  +VR+LM++ GL K
Sbjct: 592 LMSNLYASDGRWSQVNQVRELMKQRGLSK 620


>ref|XP_004298396.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 706

 Score =  115 bits (287), Expect = 8e-24
 Identities = 52/94 (55%), Positives = 72/94 (76%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAG+LEEA EFI++MP++ D + +GA LHGCR++ RF+LG+V ++RM+ L PN   YYV
Sbjct: 597 ARAGKLEEALEFIEKMPVRPDVSSFGAFLHGCRLYSRFDLGKVAIKRMLELHPNEASYYV 656

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCS 283
           LM NLYAS+GRW +  +VR+LM++ GL K    S
Sbjct: 657 LMCNLYASDGRWSQVNQVRELMKQRGLSKSQAYS 690


>gb|ESW30612.1| hypothetical protein PHAVU_002G167800g [Phaseolus vulgaris]
          Length = 702

 Score =  114 bits (286), Expect = 1e-23
 Identities = 52/95 (54%), Positives = 71/95 (74%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAG LEEA  FI+RMP++   +V+GA LHGC +H RFE+GE  ++RM+ L P+   YYV
Sbjct: 591 ARAGNLEEAFHFIERMPVEPSVSVFGAFLHGCGLHSRFEMGEAAIKRMLELHPDEASYYV 650

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCSS 286
           L+SNL AS+GRW    +VR+++++ GL K PGCSS
Sbjct: 651 LVSNLCASDGRWGMVKQVREMIKQRGLNKVPGCSS 685


>ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
           gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis
           thaliana] gi|330250600|gb|AEC05694.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  114 bits (286), Expect = 1e-23
 Identities = 53/95 (55%), Positives = 73/95 (76%)
 Frame = +2

Query: 2   ARAGRLEEAQEFIDRMPIQADTNVWGALLHGCRMHWRFELGEVVVRRMMTLLPNRPDYYV 181
           ARAG LE+A + I++MPIQ D   +GA LHGC MH RF+LGE+V+++M+ L P+   YYV
Sbjct: 593 ARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYV 652

Query: 182 LMSNLYASEGRWDEALKVRKLMEEMGLVKQPGCSS 286
           L+SNLYAS+GRW++A +VR LM++ GL K  G S+
Sbjct: 653 LVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHST 687