BLASTX nr result
ID: Zingiber23_contig00052324
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00052324
(234 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-... 71 1e-10
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-... 71 1e-10
ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [A... 69 2e-10
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-... 70 3e-10
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-... 70 3e-10
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr... 70 3e-10
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-... 69 7e-10
ref|XP_004160694.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 69 7e-10
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-... 69 7e-10
ref|XP_004500709.1| PREDICTED: RNA polymerase sigma factor sigB-... 67 9e-10
ref|XP_003604081.1| RNA polymerase sigma factor rpoD [Medicago t... 68 1e-09
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-... 64 2e-09
emb|CBI40014.3| unnamed protein product [Vitis vinifera] 64 2e-09
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ... 67 2e-09
gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus pe... 67 2e-09
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis] 65 3e-09
ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutr... 65 4e-09
emb|CAD20831.2| sigma factor [Spinacia oleracea] 66 4e-09
emb|CAB83106.1| sigma factor 2 [Sinapis alba] 65 7e-09
ref|XP_002889701.1| hypothetical protein ARALYDRAFT_470915 [Arab... 64 9e-09
>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
tuberosum]
Length = 613
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/44 (75%), Positives = 41/44 (93%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+LDTLNPR+KQV+ RFGLE+G+MKTLQEIG+ MGVS+ER+RQI
Sbjct: 547 VLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQI 590
>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
lycopersicum]
Length = 613
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/44 (75%), Positives = 41/44 (93%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+LDTLNPR+KQV+ RFGLE+G+MKTLQEIG+ MGVS+ER+RQI
Sbjct: 547 VLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQI 590
>ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
gi|548831956|gb|ERM94758.1| hypothetical protein
AMTR_s00011p00258380 [Amborella trichopoda]
Length = 570
Score = 69.3 bits (168), Expect(2) = 2e-10
Identities = 32/44 (72%), Positives = 41/44 (93%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+L+TLNPR+KQV+ RFGLE+G+MKTLQEIG+ MGVS+ER+RQI
Sbjct: 503 VLNTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQI 546
Score = 21.6 bits (44), Expect(2) = 2e-10
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 164 ELKSKRRMRNLQQCLI 211
+LK+K+R +NL+Q L+
Sbjct: 553 KLKNKKRTKNLRQYLL 568
>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
sinensis]
Length = 525
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/44 (72%), Positives = 41/44 (93%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+LDTLNPR++QV+ RFGLE+G+MKTLQEIG+ MGVS+ER+RQI
Sbjct: 458 VLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQI 501
>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
sinensis]
Length = 605
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/44 (72%), Positives = 41/44 (93%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+LDTLNPR++QV+ RFGLE+G+MKTLQEIG+ MGVS+ER+RQI
Sbjct: 538 VLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQI 581
>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
gi|557539534|gb|ESR50578.1| hypothetical protein
CICLE_v10030998mg [Citrus clementina]
Length = 605
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/44 (72%), Positives = 41/44 (93%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+LDTLNPR++QV+ RFGLE+G+MKTLQEIG+ MGVS+ER+RQI
Sbjct: 538 VLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQI 581
>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
subsp. vesca]
Length = 616
Score = 68.9 bits (167), Expect = 7e-10
Identities = 31/44 (70%), Positives = 41/44 (93%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+LD+LNPR+KQV+ RFG+E+G+MKTLQEIG+ MGVS+ER+RQI
Sbjct: 550 VLDSLNPREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQI 593
>ref|XP_004160694.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase sigma factor
sigB-like [Cucumis sativus]
Length = 286
Score = 68.9 bits (167), Expect = 7e-10
Identities = 31/44 (70%), Positives = 41/44 (93%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+LD+LNPR+KQV+ RFG+E+G+MKTLQEIG+ MGVS+ER+RQI
Sbjct: 220 VLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQI 263
>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
polymerase sigma factor sigB-like [Cucumis sativus]
Length = 580
Score = 68.9 bits (167), Expect = 7e-10
Identities = 31/44 (70%), Positives = 41/44 (93%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+LD+LNPR+KQV+ RFG+E+G+MKTLQEIG+ MGVS+ER+RQI
Sbjct: 514 VLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQI 557
>ref|XP_004500709.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cicer arietinum]
Length = 564
Score = 67.0 bits (162), Expect(2) = 9e-10
Identities = 29/44 (65%), Positives = 41/44 (93%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+LD+LNPR++QV+ RFG+++G+MKTLQEIG+ MGVS+ER+RQI
Sbjct: 498 VLDSLNPRERQVIRWRFGMDDGRMKTLQEIGEMMGVSRERIRQI 541
Score = 21.6 bits (44), Expect(2) = 9e-10
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 164 ELKSKRRMRNLQQCLI 211
+LK+K+R ++LQQ L+
Sbjct: 548 KLKNKKRAKHLQQYLV 563
>ref|XP_003604081.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
gi|355493129|gb|AES74332.1| RNA polymerase sigma factor
rpoD [Medicago truncatula]
Length = 572
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/44 (68%), Positives = 41/44 (93%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+LD+LNPR+KQV+ RFG+++G+MKTLQEIG+ MGVS+ER+RQI
Sbjct: 506 VLDSLNPREKQVIKWRFGMDDGRMKTLQEIGEMMGVSRERIRQI 549
>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
Length = 578
Score = 64.3 bits (155), Expect(2) = 2e-09
Identities = 29/44 (65%), Positives = 40/44 (90%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+L++LNPR+KQV+ R+GLE+G+ KTLQEIG+ MGVS+ER+RQI
Sbjct: 512 VLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQI 555
Score = 22.7 bits (47), Expect(2) = 2e-09
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 164 ELKSKRRMRNLQQCLI 211
+LK+KRR ++LQQ L+
Sbjct: 562 KLKNKRRTKHLQQYLV 577
>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 64.3 bits (155), Expect(2) = 2e-09
Identities = 29/44 (65%), Positives = 40/44 (90%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+L++LNPR+KQV+ R+GLE+G+ KTLQEIG+ MGVS+ER+RQI
Sbjct: 509 VLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQI 552
Score = 22.7 bits (47), Expect(2) = 2e-09
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 164 ELKSKRRMRNLQQCLI 211
+LK+KRR ++LQQ L+
Sbjct: 559 KLKNKRRTKHLQQYLV 574
>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
rpoD1, putative [Ricinus communis]
Length = 569
Score = 67.0 bits (162), Expect = 2e-09
Identities = 31/44 (70%), Positives = 40/44 (90%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+L+TLNPR+ QV+ RFGLE+G+MKTLQEIG+ MGVS+ER+RQI
Sbjct: 503 VLNTLNPRETQVVRWRFGLEDGRMKTLQEIGEIMGVSRERIRQI 546
>gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus persica]
Length = 401
Score = 66.6 bits (161), Expect(2) = 2e-09
Identities = 31/44 (70%), Positives = 40/44 (90%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+LD+LN R+KQV+ RFGLE+G+MKTLQEIG+ MGVS+ER+RQI
Sbjct: 335 VLDSLNAREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQI 378
Score = 20.4 bits (41), Expect(2) = 2e-09
Identities = 7/16 (43%), Positives = 14/16 (87%)
Frame = +2
Query: 164 ELKSKRRMRNLQQCLI 211
+LK+K+R ++LQQ ++
Sbjct: 385 KLKNKKRTKHLQQYVV 400
>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 574
Score = 64.7 bits (156), Expect(2) = 3e-09
Identities = 29/44 (65%), Positives = 40/44 (90%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+LD+LN R+KQV+ RFG+++G+MKTLQEIG+ MGVS+ER+RQI
Sbjct: 507 VLDSLNQREKQVIRWRFGMDDGRMKTLQEIGELMGVSRERIRQI 550
Score = 21.9 bits (45), Expect(2) = 3e-09
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 164 ELKSKRRMRNLQQCLI 211
+LK+K+R ++LQQ LI
Sbjct: 557 KLKNKKRTKHLQQYLI 572
>ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutrema salsugineum]
gi|557095448|gb|ESQ36030.1| hypothetical protein
EUTSA_v10007187mg [Eutrema salsugineum]
Length = 579
Score = 65.5 bits (158), Expect(2) = 4e-09
Identities = 30/44 (68%), Positives = 41/44 (93%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+LD+L+ R+KQV+ RFG+E+G+MKTLQEIG++MGVS+ERVRQI
Sbjct: 513 VLDSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQI 556
Score = 20.8 bits (42), Expect(2) = 4e-09
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 164 ELKSKRRMRNLQQCLI 211
+LK+K+R +LQQ L+
Sbjct: 563 KLKNKKRSNHLQQYLV 578
>emb|CAD20831.2| sigma factor [Spinacia oleracea]
Length = 575
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/44 (70%), Positives = 40/44 (90%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+LDTL+ R+KQV+ RFGLE+G+MKTLQEIG+ MGVS+ER+RQI
Sbjct: 509 VLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQI 552
>emb|CAB83106.1| sigma factor 2 [Sinapis alba]
Length = 575
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/44 (68%), Positives = 41/44 (93%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+LD+L+ R+KQV+ RFG+E+G+MKTLQEIG++MGVS+ERVRQI
Sbjct: 504 VLDSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQI 547
>ref|XP_002889701.1| hypothetical protein ARALYDRAFT_470915 [Arabidopsis lyrata subsp.
lyrata] gi|297335543|gb|EFH65960.1| hypothetical protein
ARALYDRAFT_470915 [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 64.3 bits (155), Expect(2) = 9e-09
Identities = 30/44 (68%), Positives = 39/44 (88%)
Frame = +1
Query: 25 ILDTLNPRDKQVMLLRFGLENGKMKTLQEIGKSMGVSQERVRQI 156
+LD+L R+KQV+ RFG+E+G+MKTLQEIG+ MGVS+ERVRQI
Sbjct: 504 VLDSLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQI 547
Score = 20.8 bits (42), Expect(2) = 9e-09
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 164 ELKSKRRMRNLQQCLI 211
+LK+K+R +LQQ L+
Sbjct: 554 KLKNKKRSNHLQQYLV 569