BLASTX nr result
ID: Zingiber23_contig00052298
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00052298
(260 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [S... 114 1e-23
ref|NP_001044643.1| Os01g0819800 [Oryza sativa Japonica Group] g... 112 5e-23
tpg|DAA57074.1| TPA: hypothetical protein ZEAMMB73_804341 [Zea m... 112 5e-23
gb|EAZ35608.1| hypothetical protein OsJ_19898 [Oryza sativa Japo... 112 5e-23
gb|EAY76294.1| hypothetical protein OsI_04228 [Oryza sativa Indi... 112 5e-23
ref|XP_004972232.1| PREDICTED: putative pentatricopeptide repeat... 108 1e-21
ref|XP_006646436.1| PREDICTED: putative pentatricopeptide repeat... 107 2e-21
ref|XP_003567226.1| PREDICTED: putative pentatricopeptide repeat... 100 2e-19
gb|EOY08282.1| Pentatricopeptide repeat (PPR) superfamily protei... 96 4e-18
ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat... 94 1e-17
ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat... 93 3e-17
ref|XP_004494044.1| PREDICTED: putative pentatricopeptide repeat... 93 4e-17
ref|XP_004305658.1| PREDICTED: putative pentatricopeptide repeat... 92 7e-17
ref|XP_002309422.2| hypothetical protein POPTR_0006s22800g [Popu... 92 9e-17
ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat... 91 2e-16
ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat... 91 2e-16
emb|CAJ32535.1| pentatricopeptide repeat-containing protein [Hor... 89 8e-16
gb|EXB54575.1| hypothetical protein L484_019144 [Morus notabilis] 88 1e-15
gb|ESW16837.1| hypothetical protein PHAVU_007G188900g [Phaseolus... 88 1e-15
ref|XP_006481751.1| PREDICTED: putative pentatricopeptide repeat... 87 2e-15
>ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
gi|241928520|gb|EES01665.1| hypothetical protein
SORBIDRAFT_03g038140 [Sorghum bicolor]
Length = 640
Score = 114 bits (285), Expect = 1e-23
Identities = 57/95 (60%), Positives = 69/95 (72%), Gaps = 9/95 (9%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMVKNDNRVY---------RNKTTENLPLTGIHS 155
+VHLFMADDHSHPQA RIY+++++LE MVK + + R + PL GIHS
Sbjct: 514 RVHLFMADDHSHPQARRIYELVIRLELMVKEKSGMRESEVAAAKGRMEKAAAQPLVGIHS 573
Query: 156 EKLALTFGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
EKLA+ FGLLNTE+G EIVVIKNLRVC DCH F+K
Sbjct: 574 EKLAVAFGLLNTEAGSEIVVIKNLRVCGDCHSFLK 608
>ref|NP_001044643.1| Os01g0819800 [Oryza sativa Japonica Group]
gi|21104789|dbj|BAB93376.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|113534174|dbj|BAF06557.1| Os01g0819800 [Oryza
sativa Japonica Group]
Length = 646
Score = 112 bits (280), Expect = 5e-23
Identities = 57/94 (60%), Positives = 68/94 (72%), Gaps = 8/94 (8%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMVKNDNR--VYRNKTTENL------PLTGIHSE 158
KVHLFMADDHSHPQA RIY+++++LE MVK V + + + PL G HSE
Sbjct: 521 KVHLFMADDHSHPQARRIYELVVELERMVKEKTGGDVVEERAEKAVAEAAAVPLVGFHSE 580
Query: 159 KLALTFGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
KLA+ FGLLNTE+G EIVVIKNLRVC DCH F+K
Sbjct: 581 KLAVAFGLLNTEAGSEIVVIKNLRVCGDCHSFLK 614
>tpg|DAA57074.1| TPA: hypothetical protein ZEAMMB73_804341 [Zea mays]
Length = 1056
Score = 112 bits (280), Expect = 5e-23
Identities = 57/95 (60%), Positives = 67/95 (70%), Gaps = 9/95 (9%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMVKNDNRVY---------RNKTTENLPLTGIHS 155
+VHLFMADDHSHPQA RIY+++ +LE MVK + V R + PL G HS
Sbjct: 930 RVHLFMADDHSHPQARRIYELVTRLELMVKEKSGVRESVVAVPKGRMEKEAAQPLVGFHS 989
Query: 156 EKLALTFGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
EKLA+ FGLLNTE+G EIVVIKNLRVC DCH F+K
Sbjct: 990 EKLAVAFGLLNTEAGSEIVVIKNLRVCGDCHSFLK 1024
>gb|EAZ35608.1| hypothetical protein OsJ_19898 [Oryza sativa Japonica Group]
Length = 602
Score = 112 bits (280), Expect = 5e-23
Identities = 57/94 (60%), Positives = 68/94 (72%), Gaps = 8/94 (8%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMVKNDNR--VYRNKTTENL------PLTGIHSE 158
KVHLFMADDHSHPQA RIY+++++LE MVK V + + + PL G HSE
Sbjct: 477 KVHLFMADDHSHPQARRIYELVVELERMVKEKTGGDVVEERAEKAVAEAAAVPLVGFHSE 536
Query: 159 KLALTFGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
KLA+ FGLLNTE+G EIVVIKNLRVC DCH F+K
Sbjct: 537 KLAVAFGLLNTEAGSEIVVIKNLRVCGDCHSFLK 570
>gb|EAY76294.1| hypothetical protein OsI_04228 [Oryza sativa Indica Group]
Length = 646
Score = 112 bits (280), Expect = 5e-23
Identities = 57/94 (60%), Positives = 68/94 (72%), Gaps = 8/94 (8%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMVKNDNR--VYRNKTTENL------PLTGIHSE 158
KVHLFMADDHSHPQA RIY+++++LE MVK V + + + PL G HSE
Sbjct: 521 KVHLFMADDHSHPQARRIYELVVELERMVKEKTGGDVVEERAEKAVAEAAAVPLVGFHSE 580
Query: 159 KLALTFGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
KLA+ FGLLNTE+G EIVVIKNLRVC DCH F+K
Sbjct: 581 KLAVAFGLLNTEAGSEIVVIKNLRVCGDCHSFLK 614
>ref|XP_004972232.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Setaria italica]
Length = 640
Score = 108 bits (269), Expect = 1e-21
Identities = 54/93 (58%), Positives = 66/93 (70%), Gaps = 7/93 (7%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMVKNDNRVYRNKTTEN-------LPLTGIHSEK 161
+VHLFMADDHSHPQA RIY+++++LE +V V ++ E L G HSEK
Sbjct: 516 RVHLFMADDHSHPQAKRIYELVMRLEQVVNERPGVSQSGAAEGGAEKAAAQRLVGFHSEK 575
Query: 162 LALTFGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
LA+ FGLLNTE+G EIVVIKNLRVC DCH F+K
Sbjct: 576 LAVAFGLLNTEAGSEIVVIKNLRVCGDCHSFLK 608
>ref|XP_006646436.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like, partial [Oryza brachyantha]
Length = 434
Score = 107 bits (266), Expect = 2e-21
Identities = 58/98 (59%), Positives = 69/98 (70%), Gaps = 12/98 (12%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMVKNDNR-------VYRN--KTTEN---LPLTG 146
KVHLFMADDHSHPQA RIY+++++LE MVK V +N KTT + + L G
Sbjct: 305 KVHLFMADDHSHPQAKRIYELVVKLEQMVKEKTGGDGGGGVVEKNGDKTTASGTAVRLVG 364
Query: 147 IHSEKLALTFGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
HSEKLA+ FGLLN E G E+VVIKNLRVC DCH F+K
Sbjct: 365 FHSEKLAVAFGLLNGEGGGEVVVIKNLRVCGDCHSFLK 402
>ref|XP_003567226.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Brachypodium distachyon]
Length = 648
Score = 100 bits (250), Expect = 2e-19
Identities = 56/98 (57%), Positives = 67/98 (68%), Gaps = 12/98 (12%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMV--KNDNRV----------YRNKTTENLPLTG 146
+VHLFMADDHSHPQA RIY+++L+LE MV K D V + KT +PL G
Sbjct: 522 RVHLFMADDHSHPQAKRIYELVLKLEQMVKEKTDGTVGIQGGRMIEGHSEKTA--VPLIG 579
Query: 147 IHSEKLALTFGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
HSEKLA+ FG+LNT G EI VIKNLRVC +CH F+K
Sbjct: 580 FHSEKLAVAFGMLNT-VGSEIAVIKNLRVCGNCHSFLK 616
>gb|EOY08282.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 610
Score = 96.3 bits (238), Expect = 4e-18
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMVKNDNRVYRNKTTENLPL---TGIHSEKLALT 173
+VHLF+ D SHPQ+ IY+M+ +LE +V+ N+ + L G+HSEKLA+
Sbjct: 490 RVHLFLCGDRSHPQSVEIYRMVDELETLVRKLVGCKNNQERRSKELFLGMGVHSEKLAIV 549
Query: 174 FGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
FGLLN+E G EIVVIKNLRVCEDCH F+K
Sbjct: 550 FGLLNSEPGTEIVVIKNLRVCEDCHLFLK 578
>ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 94.4 bits (233), Expect = 1e-17
Identities = 48/91 (52%), Positives = 62/91 (68%), Gaps = 5/91 (5%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMVK-----NDNRVYRNKTTENLPLTGIHSEKLA 167
++HLF+A D +HPQA IY M+ LE ++K NDN ++ E + G+HSEKLA
Sbjct: 508 RIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSNDND-QESRNEELITGMGVHSEKLA 566
Query: 168 LTFGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
+ FGL+NTE G EI VIKNLRVC DCH F+K
Sbjct: 567 IAFGLINTEPGTEITVIKNLRVCGDCHLFLK 597
>ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Glycine max]
Length = 630
Score = 93.2 bits (230), Expect = 3e-17
Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 3/89 (3%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMVKN---DNRVYRNKTTENLPLTGIHSEKLALT 173
K++LF + D SHPQ +IY+M+ +LE++VK N + ++ E L TG+HSEKLA+
Sbjct: 510 KMNLFYSGDLSHPQTKQIYRMLDELESLVKEVHPPNEKCQGRSEELLIGTGVHSEKLAIA 569
Query: 174 FGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
F LLNT+SG EI V+KNLRVC DCH F+K
Sbjct: 570 FALLNTKSGTEITVMKNLRVCVDCHLFIK 598
>ref|XP_004494044.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cicer arietinum]
Length = 641
Score = 92.8 bits (229), Expect = 4e-17
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMVKN---DNRVYRNKTTENLPLTGIHSEKLALT 173
K+HLF + D +HPQ+ IY+M+ +LE +VK + + ++ E L G+HSEKLA+
Sbjct: 521 KMHLFYSGDTNHPQSKEIYRMLGELENLVKEIHQPDHKCQGRSEEQLTGAGVHSEKLAIA 580
Query: 174 FGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
FGLLNT SG +I V+KNLRVC DCH F+K
Sbjct: 581 FGLLNTRSGTDITVMKNLRVCVDCHVFIK 609
>ref|XP_004305658.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Fragaria vesca subsp. vesca]
Length = 608
Score = 92.0 bits (227), Expect = 7e-17
Identities = 46/86 (53%), Positives = 57/86 (66%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMVKNDNRVYRNKTTENLPLTGIHSEKLALTFGL 182
+VH+F+A D+SH Q IY ++ +LE + + N N GIHSEKLA+ FGL
Sbjct: 491 RVHVFLAGDNSHCQTEDIYSILDELENLARELGVSNENDGERNKERVGIHSEKLAIAFGL 550
Query: 183 LNTESGEEIVVIKNLRVCEDCHHFMK 260
LNTE G EIVVIKNLRVC DCH F+K
Sbjct: 551 LNTEPGTEIVVIKNLRVCADCHLFIK 576
>ref|XP_002309422.2| hypothetical protein POPTR_0006s22800g [Populus trichocarpa]
gi|550336888|gb|EEE92945.2| hypothetical protein
POPTR_0006s22800g [Populus trichocarpa]
Length = 604
Score = 91.7 bits (226), Expect = 9e-17
Identities = 45/89 (50%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMVKNDNRVYRN---KTTENLPLTGIHSEKLALT 173
+VHLF A D +HPQ N IYK + +LE +VK+ + +N + E L G+HSEKLA+
Sbjct: 462 RVHLFFAGDRNHPQTNEIYKKLNELENLVKDLDGCKKNDHERREEYLNSMGVHSEKLAVA 521
Query: 174 FGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
F LLNT EI++IKNLR+C DCH F+K
Sbjct: 522 FALLNTRKETEIIIIKNLRICGDCHLFIK 550
>ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/93 (47%), Positives = 63/93 (67%), Gaps = 7/93 (7%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMV-------KNDNRVYRNKTTENLPLTGIHSEK 161
+VH F+ D +H Q++ IY+++ +LEA++ + DNR NK + G+HSEK
Sbjct: 492 RVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDNREESNK--DGFTRVGVHSEK 549
Query: 162 LALTFGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
LA+ FGLLNT +G E+V+IKNLR+CEDCH F K
Sbjct: 550 LAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFK 582
>ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/93 (47%), Positives = 63/93 (67%), Gaps = 7/93 (7%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMV-------KNDNRVYRNKTTENLPLTGIHSEK 161
+VH F+ D +H Q++ IY+++ +LEA++ + DNR NK + G+HSEK
Sbjct: 501 RVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDNREESNK--DGFTRVGVHSEK 558
Query: 162 LALTFGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
LA+ FGLLNT +G E+V+IKNLR+CEDCH F K
Sbjct: 559 LAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFK 591
>emb|CAJ32535.1| pentatricopeptide repeat-containing protein [Hordeum vulgare subsp.
vulgare]
Length = 652
Score = 88.6 bits (218), Expect = 8e-16
Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 8/92 (8%)
Frame = +3
Query: 9 HLFMADDHSHPQANRIYKMILQLEAMVK--------NDNRVYRNKTTENLPLTGIHSEKL 164
HL M DDHSHPQA RIY+++++LE MVK N+ ++ +K PL G HSEKL
Sbjct: 522 HLLMDDDHSHPQAKRIYELVIELEQMVKEKMNVTAXNEGKLSADKKVA-APLVGTHSEKL 580
Query: 165 ALTFGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
A+ F LLNT EIVV+ NLRVC DCH +K
Sbjct: 581 AVPFSLLNTVD-VEIVVMMNLRVCGDCHSLLK 611
>gb|EXB54575.1| hypothetical protein L484_019144 [Morus notabilis]
Length = 636
Score = 87.8 bits (216), Expect = 1e-15
Identities = 48/91 (52%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMVK-----NDNRVYRNKTTENLPLTGIHSEKLA 167
KVH+F+A D +H Q IY M+ +LE VK N R K E L G+HSEKLA
Sbjct: 514 KVHMFLAGDKTHSQTADIYGMLDELENSVKQLGGPNGEDHKRRKGEEQLIGEGVHSEKLA 573
Query: 168 LTFGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
+ FGL+NT G EIVVIKNLR C DCH F+K
Sbjct: 574 IAFGLVNTSPGTEIVVIKNLRACGDCHLFIK 604
>gb|ESW16837.1| hypothetical protein PHAVU_007G188900g [Phaseolus vulgaris]
Length = 626
Score = 87.8 bits (216), Expect = 1e-15
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMVKN---DNRVYRNKTTENLPLTGIHSEKLALT 173
K+HLF + D SHPQ+ IY+M+ +LE +VK ++ + + E L TG+HSEKLA+
Sbjct: 506 KMHLFHSGDLSHPQSKEIYRMLDKLENLVKEIHPPDKKCQGRNEELLIGTGVHSEKLAVA 565
Query: 174 FGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
F LLN++SG EI V+KNLRVC CH F+K
Sbjct: 566 FALLNSKSGTEITVMKNLRVCVHCHLFIK 594
>ref|XP_006481751.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Citrus sinensis]
Length = 636
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/89 (48%), Positives = 61/89 (68%), Gaps = 3/89 (3%)
Frame = +3
Query: 3 KVHLFMADDHSHPQANRIYKMILQLEAMVKNDNRVYRN---KTTENLPLTGIHSEKLALT 173
+VHLFM D +H Q IY+M+ +LE +V+ + R+ + E+L T +HSEKLA+
Sbjct: 516 RVHLFMVGDRNHHQTVEIYRMLDKLENLVQEHDGTKRSDQKNSEEHLNDTEVHSEKLAIA 575
Query: 174 FGLLNTESGEEIVVIKNLRVCEDCHHFMK 260
FG++NT G EIVV+KNLR+C DCH F+K
Sbjct: 576 FGIINTSPGTEIVVMKNLRICGDCHLFIK 604