BLASTX nr result
ID: Zingiber23_contig00052272
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00052272
(516 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW61192.1| putative MYB DNA-binding domain superfamily prote... 52 4e-06
gb|ADU60099.1| circadian clock associated protein 1 [Zea mays] 52 4e-06
ref|NP_001147482.1| LHY protein [Zea mays] gi|195611664|gb|ACG27... 52 4e-06
gb|ACN25207.1| unknown [Zea mays] 52 5e-06
emb|CAD12767.2| LHY protein [Phaseolus vulgaris] 49 6e-06
gb|ESW07326.1| hypothetical protein PHAVU_010G120400g [Phaseolus... 49 6e-06
ref|XP_006659137.1| PREDICTED: protein CCA1-like isoform X1 [Ory... 50 1e-05
ref|XP_006659144.1| PREDICTED: protein CCA1-like isoform X8 [Ory... 50 1e-05
>gb|AFW61192.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 720
Score = 52.0 bits (123), Expect(2) = 4e-06
Identities = 30/71 (42%), Positives = 42/71 (59%)
Frame = -3
Query: 217 ILKKLQPEFTELPADVNKNICTTTNFNNLPDDSENKLSIRNNNCAVSGRFKPSRTGLKPY 38
+ K+ + E T + D+NKN T+ + ++L E + S N + + K RTG KPY
Sbjct: 633 VAKEEEDEVTTVAVDLNKN-ATSIDHDDLDTMDEPRASFPNELSHL--KLKSRRTGFKPY 689
Query: 37 KRCSVEAKENR 5
KRCSVEAKENR
Sbjct: 690 KRCSVEAKENR 700
Score = 23.9 bits (50), Expect(2) = 4e-06
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = -1
Query: 447 SACGTNHLRLRNSGSLNHGRRFPKRL*WKLLAI*ISQPLPLEHHHYS*CIFLSFCQDQFA 268
SA TNH R R++GS + WK ++ + + A
Sbjct: 579 SAGDTNHRRFRSNGSTSDS--------WKEVSE----------------------EGRLA 608
Query: 267 FRALFKREVLPQ 232
F ALF RE LPQ
Sbjct: 609 FDALFSREKLPQ 620
>gb|ADU60099.1| circadian clock associated protein 1 [Zea mays]
Length = 720
Score = 52.0 bits (123), Expect(2) = 4e-06
Identities = 30/71 (42%), Positives = 42/71 (59%)
Frame = -3
Query: 217 ILKKLQPEFTELPADVNKNICTTTNFNNLPDDSENKLSIRNNNCAVSGRFKPSRTGLKPY 38
+ K+ + E T + D+NKN T+ + ++L E + S N + + K RTG KPY
Sbjct: 633 VAKEEEDEVTTVAVDLNKN-ATSIDHDDLDTMDEPRASFPNELSHL--KLKSRRTGFKPY 689
Query: 37 KRCSVEAKENR 5
KRCSVEAKENR
Sbjct: 690 KRCSVEAKENR 700
Score = 23.9 bits (50), Expect(2) = 4e-06
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = -1
Query: 447 SACGTNHLRLRNSGSLNHGRRFPKRL*WKLLAI*ISQPLPLEHHHYS*CIFLSFCQDQFA 268
SA TNH R R++GS + WK ++ + + A
Sbjct: 579 SAGDTNHRRFRSNGSTSDS--------WKEVSE----------------------EGRLA 608
Query: 267 FRALFKREVLPQ 232
F ALF RE LPQ
Sbjct: 609 FDALFSREKLPQ 620
>ref|NP_001147482.1| LHY protein [Zea mays] gi|195611664|gb|ACG27662.1| LHY protein [Zea
mays]
Length = 720
Score = 52.0 bits (123), Expect(2) = 4e-06
Identities = 30/71 (42%), Positives = 42/71 (59%)
Frame = -3
Query: 217 ILKKLQPEFTELPADVNKNICTTTNFNNLPDDSENKLSIRNNNCAVSGRFKPSRTGLKPY 38
+ K+ + E T + D+NKN T+ + ++L E + S N + + K RTG KPY
Sbjct: 633 VAKEEEDEVTTVAVDLNKN-ATSIDHDDLDTMDEPRASFPNELSHL--KLKSRRTGFKPY 689
Query: 37 KRCSVEAKENR 5
KRCSVEAKENR
Sbjct: 690 KRCSVEAKENR 700
Score = 23.9 bits (50), Expect(2) = 4e-06
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = -1
Query: 447 SACGTNHLRLRNSGSLNHGRRFPKRL*WKLLAI*ISQPLPLEHHHYS*CIFLSFCQDQFA 268
SA TNH R R++GS + WK ++ + + A
Sbjct: 579 SAGDTNHRRFRSNGSTSDS--------WKEVSE----------------------EGRLA 608
Query: 267 FRALFKREVLPQ 232
F ALF RE LPQ
Sbjct: 609 FDALFSREKLPQ 620
>gb|ACN25207.1| unknown [Zea mays]
Length = 307
Score = 52.0 bits (123), Expect(2) = 5e-06
Identities = 30/71 (42%), Positives = 42/71 (59%)
Frame = -3
Query: 217 ILKKLQPEFTELPADVNKNICTTTNFNNLPDDSENKLSIRNNNCAVSGRFKPSRTGLKPY 38
+ K+ + E T + D+NKN T+ + ++L E + S N + + K RTG KPY
Sbjct: 220 VAKEEEDEVTTVAVDLNKN-ATSIDHDDLDTMDEPRASFPNELSHL--KLKSRRTGFKPY 276
Query: 37 KRCSVEAKENR 5
KRCSVEAKENR
Sbjct: 277 KRCSVEAKENR 287
Score = 23.9 bits (50), Expect(2) = 5e-06
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = -1
Query: 447 SACGTNHLRLRNSGSLNHGRRFPKRL*WKLLAI*ISQPLPLEHHHYS*CIFLSFCQDQFA 268
SA TNH R R++GS + WK ++ + + A
Sbjct: 166 SAGDTNHRRFRSNGSTSDS--------WKEVSE----------------------EGRLA 195
Query: 267 FRALFKREVLPQ 232
F ALF RE LPQ
Sbjct: 196 FDALFSREKLPQ 207
>emb|CAD12767.2| LHY protein [Phaseolus vulgaris]
Length = 723
Score = 48.9 bits (115), Expect(2) = 6e-06
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = -3
Query: 175 DVNKNICTTTNFNNLPDDSENKLSIRNNNCAVSGRFKPSRTGLKPYKRCSVEAKENR 5
D++ C++ + +P EN + + G+ K RTG KPYKRCSVEA+ENR
Sbjct: 647 DLDSKKCSSNALHKIPSFVENNVGLLTIGLG-QGKLKTRRTGFKPYKRCSVEARENR 702
Score = 26.6 bits (57), Expect(2) = 6e-06
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 282 QDQFAFRALFKREVLPQ 232
+ + AF+ALF REVLPQ
Sbjct: 601 EGRLAFQALFSREVLPQ 617
>gb|ESW07326.1| hypothetical protein PHAVU_010G120400g [Phaseolus vulgaris]
Length = 452
Score = 48.9 bits (115), Expect(2) = 6e-06
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = -3
Query: 175 DVNKNICTTTNFNNLPDDSENKLSIRNNNCAVSGRFKPSRTGLKPYKRCSVEAKENR 5
D++ C++ + +P EN + + G+ K RTG KPYKRCSVEA+ENR
Sbjct: 376 DLDSKKCSSNALHKIPSFVENNVGLLTIGLG-QGKLKTRRTGFKPYKRCSVEARENR 431
Score = 26.6 bits (57), Expect(2) = 6e-06
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 282 QDQFAFRALFKREVLPQ 232
+ + AF+ALF REVLPQ
Sbjct: 330 EGRLAFQALFSREVLPQ 346
>ref|XP_006659137.1| PREDICTED: protein CCA1-like isoform X1 [Oryza brachyantha]
gi|573953736|ref|XP_006659138.1| PREDICTED: protein
CCA1-like isoform X2 [Oryza brachyantha]
gi|573953738|ref|XP_006659139.1| PREDICTED: protein
CCA1-like isoform X3 [Oryza brachyantha]
gi|573953740|ref|XP_006659140.1| PREDICTED: protein
CCA1-like isoform X4 [Oryza brachyantha]
gi|573953742|ref|XP_006659141.1| PREDICTED: protein
CCA1-like isoform X5 [Oryza brachyantha]
gi|573953744|ref|XP_006659142.1| PREDICTED: protein
CCA1-like isoform X6 [Oryza brachyantha]
gi|573953746|ref|XP_006659143.1| PREDICTED: protein
CCA1-like isoform X7 [Oryza brachyantha]
Length = 724
Score = 50.1 bits (118), Expect(2) = 1e-05
Identities = 30/71 (42%), Positives = 40/71 (56%)
Frame = -3
Query: 217 ILKKLQPEFTELPADVNKNICTTTNFNNLPDDSENKLSIRNNNCAVSGRFKPSRTGLKPY 38
+ K+ + E T + D+NKN+ T + L E + S N + + K RTG KPY
Sbjct: 638 VTKEDEDEVTTVTVDLNKNV--TIIDHELDTTDEPRASFPNELSNL--KLKSRRTGFKPY 693
Query: 37 KRCSVEAKENR 5
KRCSVEAKENR
Sbjct: 694 KRCSVEAKENR 704
Score = 24.6 bits (52), Expect(2) = 1e-05
Identities = 22/72 (30%), Positives = 28/72 (38%)
Frame = -1
Query: 447 SACGTNHLRLRNSGSLNHGRRFPKRL*WKLLAI*ISQPLPLEHHHYS*CIFLSFCQDQFA 268
SA TNH R R+SGS + WK ++ + + A
Sbjct: 584 SAGDTNHRRFRSSGSTSDS--------WKEVSE----------------------EGRLA 613
Query: 267 FRALFKREVLPQ 232
F ALF RE LPQ
Sbjct: 614 FDALFSRERLPQ 625
>ref|XP_006659144.1| PREDICTED: protein CCA1-like isoform X8 [Oryza brachyantha]
gi|573953750|ref|XP_006659145.1| PREDICTED: protein
CCA1-like isoform X9 [Oryza brachyantha]
Length = 718
Score = 50.1 bits (118), Expect(2) = 1e-05
Identities = 30/71 (42%), Positives = 40/71 (56%)
Frame = -3
Query: 217 ILKKLQPEFTELPADVNKNICTTTNFNNLPDDSENKLSIRNNNCAVSGRFKPSRTGLKPY 38
+ K+ + E T + D+NKN+ T + L E + S N + + K RTG KPY
Sbjct: 632 VTKEDEDEVTTVTVDLNKNV--TIIDHELDTTDEPRASFPNELSNL--KLKSRRTGFKPY 687
Query: 37 KRCSVEAKENR 5
KRCSVEAKENR
Sbjct: 688 KRCSVEAKENR 698
Score = 24.6 bits (52), Expect(2) = 1e-05
Identities = 22/72 (30%), Positives = 28/72 (38%)
Frame = -1
Query: 447 SACGTNHLRLRNSGSLNHGRRFPKRL*WKLLAI*ISQPLPLEHHHYS*CIFLSFCQDQFA 268
SA TNH R R+SGS + WK ++ + + A
Sbjct: 578 SAGDTNHRRFRSSGSTSDS--------WKEVSE----------------------EGRLA 607
Query: 267 FRALFKREVLPQ 232
F ALF RE LPQ
Sbjct: 608 FDALFSRERLPQ 619