BLASTX nr result

ID: Zingiber23_contig00052188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00052188
         (320 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   106   4e-21
emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera]   104   1e-20
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   103   2e-20
ref|XP_003634327.1| PREDICTED: uncharacterized protein LOC100258...   102   7e-20
emb|CAN66626.1| hypothetical protein VITISV_001861 [Vitis vinifera]    99   7e-19
gb|AAT38766.2| Polyprotein, putative [Solanum demissum]                88   1e-15
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]                85   9e-15
emb|CAN80986.1| hypothetical protein VITISV_030770 [Vitis vinifera]    85   1e-14
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]    84   2e-14
emb|CAN67087.1| hypothetical protein VITISV_031092 [Vitis vinifera]    84   2e-14
emb|CAN62922.1| hypothetical protein VITISV_013519 [Vitis vinifera]    81   2e-13
emb|CAN73119.1| hypothetical protein VITISV_020442 [Vitis vinifera]    80   2e-13
ref|XP_006477890.1| PREDICTED: uncharacterized protein LOC102616...    80   3e-13
gb|EXB38051.1| putative ubiquitin conjugation factor E4 [Morus n...    80   4e-13
emb|CAD39988.3| OSJNBb0045P24.6 [Oryza sativa Japonica Group]          79   5e-13
gb|AAS07263.1| putative gag/pol polyprotein [Oryza sativa Japoni...    79   5e-13
gb|ABA94723.1| retrotransposon protein, putative, Ty1-copia subc...    79   6e-13
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...    79   6e-13
gb|ABA92101.2| retrotransposon protein, putative, Ty1-copia subc...    79   6e-13
gb|AAU90206.1| putative polyprotein [Oryza sativa Japonica Group]      79   6e-13

>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  106 bits (264), Expect = 4e-21
 Identities = 50/65 (76%), Positives = 57/65 (87%)
 Frame = +2

Query: 2    ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQF 181
            A+WI ++KDSKS  GYVFTLGGA +S KSSKQT+I RSTMESEF+ALDKCGEEA+WL  F
Sbjct: 1164 ANWISNVKDSKSHSGYVFTLGGAAVSWKSSKQTVIARSTMESEFIALDKCGEEAEWLRHF 1223

Query: 182  LEDIP 196
            LEDIP
Sbjct: 1224 LEDIP 1228


>emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera]
          Length = 313

 Score =  104 bits (260), Expect = 1e-20
 Identities = 50/65 (76%), Positives = 56/65 (86%)
 Frame = +2

Query: 2   ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQF 181
           A+WI ++KDSKS  GYVFTLGGA  S KSSKQT+I RSTMESEF+ALDKCGEEA+WL  F
Sbjct: 161 ANWISNVKDSKSHSGYVFTLGGAAXSWKSSKQTVIARSTMESEFIALDKCGEEAEWLRHF 220

Query: 182 LEDIP 196
           LEDIP
Sbjct: 221 LEDIP 225


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  103 bits (258), Expect = 2e-20
 Identities = 49/65 (75%), Positives = 56/65 (86%)
 Frame = +2

Query: 2    ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQF 181
            A+WI ++KDSKS  GYVFTLGGA +S KSSKQ +I RSTMESEF+ALDKCGEEA+WL  F
Sbjct: 1125 ANWISNVKDSKSHSGYVFTLGGAAVSWKSSKQXVIARSTMESEFIALDKCGEEAEWLRHF 1184

Query: 182  LEDIP 196
            LEDIP
Sbjct: 1185 LEDIP 1189


>ref|XP_003634327.1| PREDICTED: uncharacterized protein LOC100258195 [Vitis vinifera]
          Length = 1274

 Score =  102 bits (253), Expect = 7e-20
 Identities = 49/65 (75%), Positives = 56/65 (86%)
 Frame = +2

Query: 2   ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQF 181
           A+WI ++KDSKS  GYVFTLGGA +S KSSKQT+I RSTMESEF+ALDK GEEA+WL  F
Sbjct: 256 ANWISNVKDSKSHSGYVFTLGGAAVSWKSSKQTVIARSTMESEFIALDKYGEEAEWLRHF 315

Query: 182 LEDIP 196
           LEDIP
Sbjct: 316 LEDIP 320


>emb|CAN66626.1| hypothetical protein VITISV_001861 [Vitis vinifera]
          Length = 422

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 49/65 (75%), Positives = 54/65 (83%)
 Frame = +2

Query: 2   ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQF 181
           A+WI D KDSKST GYVFTLGGA +S KSSKQT I RSTMESEF+A+DK GEEA+ L  F
Sbjct: 271 ANWISDSKDSKSTSGYVFTLGGAAVSWKSSKQTCIARSTMESEFIAIDKAGEEAEXLRNF 330

Query: 182 LEDIP 196
           LEDIP
Sbjct: 331 LEDIP 335


>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
          Length = 1355

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 43/65 (66%), Positives = 50/65 (76%)
 Frame = +2

Query: 2    ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQF 181
            A+WI    + KST GYVFTLG   +S KSSKQT I RSTMES+F+ALDK G+EA+WL  F
Sbjct: 1110 ANWITGSNEVKSTSGYVFTLGRGAVSWKSSKQTCIARSTMESKFIALDKAGKEAEWLQNF 1169

Query: 182  LEDIP 196
            LEDIP
Sbjct: 1170 LEDIP 1174


>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 40/65 (61%), Positives = 51/65 (78%)
 Frame = +2

Query: 2    ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQF 181
            A+WI D  ++KST GYVFTLGG  ++ +S++QTII RSTMESEFVAL+  G EA+WL  F
Sbjct: 1129 ANWISDSDETKSTSGYVFTLGGGAVTWRSARQTIIARSTMESEFVALEMAGSEAEWLKNF 1188

Query: 182  LEDIP 196
            L +IP
Sbjct: 1189 LANIP 1193


>emb|CAN80986.1| hypothetical protein VITISV_030770 [Vitis vinifera]
          Length = 251

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/65 (63%), Positives = 48/65 (73%)
 Frame = +2

Query: 2   ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQF 181
           A+WI D  D KST GYVFTLGG+ +S KS+KQT ITRSTME EF+AL+K   E +WL   
Sbjct: 186 ANWISDSDDMKSTSGYVFTLGGSAVSWKSTKQTCITRSTMEVEFIALEKASSEVEWLRNL 245

Query: 182 LEDIP 196
           L DIP
Sbjct: 246 LVDIP 250


>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
          Length = 839

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/52 (75%), Positives = 45/52 (86%)
 Frame = +2

Query: 2   ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGE 157
           A+WIFD+KDSKST GY+FT+GG  IS KSSKQT I RSTMESEF+ALDK G+
Sbjct: 788 ANWIFDMKDSKSTSGYIFTIGGVAISRKSSKQTCIARSTMESEFIALDKAGK 839


>emb|CAN67087.1| hypothetical protein VITISV_031092 [Vitis vinifera]
          Length = 484

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/65 (58%), Positives = 50/65 (76%)
 Frame = +2

Query: 2   ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQF 181
           A+WI D  + KST GYVF LGG+V+S KS+K+T ITRSTME+EF+AL+K   E +WL  F
Sbjct: 322 ANWILDSNEMKSTSGYVFILGGSVVSWKSTKKTCITRSTMEAEFIALEKASSEVEWLRNF 381

Query: 182 LEDIP 196
           L ++P
Sbjct: 382 LANVP 386


>emb|CAN62922.1| hypothetical protein VITISV_013519 [Vitis vinifera]
          Length = 453

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 39/65 (60%), Positives = 48/65 (73%)
 Frame = +2

Query: 2   ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQF 181
           A+WI D  + K T GYVF LGG+V+S KS+KQT ITRSTME+EF+AL+    EA+WL   
Sbjct: 192 ANWILDSDEMKFTNGYVFILGGSVVSWKSAKQTRITRSTMEAEFIALENASSEAEWLGNL 251

Query: 182 LEDIP 196
           L DIP
Sbjct: 252 LADIP 256


>emb|CAN73119.1| hypothetical protein VITISV_020442 [Vitis vinifera]
          Length = 588

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 38/65 (58%), Positives = 49/65 (75%)
 Frame = +2

Query: 2   ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQF 181
           A+WI D  + +ST GYVF LGG+++S KS+KQT I RSTME+EF+AL+K   EA+WL   
Sbjct: 427 ANWISDSDEMESTSGYVFILGGSLVSWKSAKQTYIARSTMEAEFIALEKISSEAEWLRNL 486

Query: 182 LEDIP 196
           L DIP
Sbjct: 487 LADIP 491


>ref|XP_006477890.1| PREDICTED: uncharacterized protein LOC102616497 [Citrus sinensis]
          Length = 829

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 37/50 (74%), Positives = 43/50 (86%)
 Frame = +2

Query: 2   ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKC 151
           A+WI D+KDSKS  GYVFTL GAV+S +SSKQT+I RSTMESEF+ LDKC
Sbjct: 302 ANWISDVKDSKSISGYVFTLAGAVVSWRSSKQTVIARSTMESEFITLDKC 351


>gb|EXB38051.1| putative ubiquitin conjugation factor E4 [Morus notabilis]
          Length = 452

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 39/52 (75%), Positives = 43/52 (82%)
 Frame = -3

Query: 201 QVGISSKNCHSHLASSPHLSRATNSDSIVDLVIIVCLEDFQEMTAPPRVNTY 46
           Q G+SSK C SH ASSPHLS ATNS SIVDLVI VCLEDF E+TAPP++ TY
Sbjct: 30  QSGMSSKKCLSHSASSPHLSNATNSASIVDLVITVCLEDFHEITAPPKMLTY 81


>emb|CAD39988.3| OSJNBb0045P24.6 [Oryza sativa Japonica Group]
          Length = 982

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 36/65 (55%), Positives = 48/65 (73%)
 Frame = +2

Query: 2    ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQF 181
            ++WIFD+ + K+T GYVFTLGG  +S +S KQTI+TRSTM++E  ALD    EA+WL   
Sbjct: 831  SNWIFDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMKAELTALDTATAEAEWLRDL 890

Query: 182  LEDIP 196
            L D+P
Sbjct: 891  LMDLP 895


>gb|AAS07263.1| putative gag/pol polyprotein [Oryza sativa Japonica Group]
            gi|108710643|gb|ABF98438.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1318

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/65 (58%), Positives = 47/65 (72%)
 Frame = +2

Query: 2    ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQF 181
            ++WI D  + K+T GYVFTLGG  +S KS KQTI+TRSTME+E  ALD    EAKWL + 
Sbjct: 1167 SNWISDADEIKATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALDTATVEAKWLREL 1226

Query: 182  LEDIP 196
            L D+P
Sbjct: 1227 LMDLP 1231


>gb|ABA94723.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 208

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 37/65 (56%), Positives = 48/65 (73%)
 Frame = +2

Query: 2   ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQF 181
           ++WI D+ + K+T GYVFTLGG V+S +S KQTI+TRSTME+E  ALD    EA+WL   
Sbjct: 88  SNWISDVDEIKATSGYVFTLGGGVVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRNL 147

Query: 182 LEDIP 196
           L D+P
Sbjct: 148 LMDLP 152


>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 37/65 (56%), Positives = 47/65 (72%)
 Frame = +2

Query: 2    ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQF 181
            A+W+ D  +  ST GYVF LGG  IS KS+KQT I RSTMESEF+AL+  G+EA+W+   
Sbjct: 973  ANWVTDNDEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNL 1032

Query: 182  LEDIP 196
            L D+P
Sbjct: 1033 LGDVP 1037


>gb|ABA92101.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 923

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 36/65 (55%), Positives = 48/65 (73%)
 Frame = +2

Query: 2   ASWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQF 181
           ++WI D+ + K+T GYVFTLGG  +S +S KQTI+TRSTME+E  ALD   +EA+WL   
Sbjct: 800 SNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATDEAEWLRDL 859

Query: 182 LEDIP 196
           L D+P
Sbjct: 860 LMDLP 864


>gb|AAU90206.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1256

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 37/64 (57%), Positives = 48/64 (75%)
 Frame = +2

Query: 5    SWIFDIKDSKSTCGYVFTLGGAVIS*KSSKQTIITRSTMESEFVALDKCGEEAKWLWQFL 184
            +WI D+ + K+T GYVFTLGGA +S +S KQTI+TRSTME+E +ALD    EA+WL   L
Sbjct: 1106 NWISDVDEIKATSGYVFTLGGAAVSWRSCKQTILTRSTMEAELMALDTATVEAEWLRDLL 1165

Query: 185  EDIP 196
             D+P
Sbjct: 1166 MDLP 1169


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