BLASTX nr result
ID: Zingiber23_contig00052180
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00052180
(239 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT28838.1| hypothetical protein F775_05778 [Aegilops tauschii] 125 4e-27
ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat... 124 2e-26
ref|XP_006656246.1| PREDICTED: putative pentatricopeptide repeat... 122 5e-26
gb|EOY09401.1| Pentatricopeptide repeat superfamily protein [The... 120 1e-25
dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japo... 119 3e-25
ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group] g... 119 3e-25
gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japo... 119 3e-25
ref|XP_004965888.1| PREDICTED: putative pentatricopeptide repeat... 119 5e-25
ref|XP_002322694.1| pentatricopeptide repeat-containing family p... 118 9e-25
ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat... 117 1e-24
emb|CBI29893.3| unnamed protein product [Vitis vinifera] 117 1e-24
ref|XP_006421479.1| hypothetical protein CICLE_v10006760mg [Citr... 116 3e-24
ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [S... 116 3e-24
ref|XP_006490046.1| PREDICTED: putative pentatricopeptide repeat... 115 6e-24
ref|XP_004497943.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 115 6e-24
ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago t... 115 8e-24
ref|XP_004306162.1| PREDICTED: putative pentatricopeptide repeat... 114 1e-23
ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat... 114 1e-23
ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat... 114 1e-23
gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays] 111 9e-23
>gb|EMT28838.1| hypothetical protein F775_05778 [Aegilops tauschii]
Length = 548
Score = 125 bits (315), Expect = 4e-27
Identities = 56/79 (70%), Positives = 71/79 (89%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GR+GR+++ALD+I++MP+EPT A+W SLLGACR+H +S+GEVVA+KLLDMEP NA NYV
Sbjct: 324 GRSGRLQKALDLIQDMPFEPTPAIWGSLLGACRVHVNVSVGEVVAQKLLDMEPGNAGNYV 383
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSNIYAA+G W+DV RVR
Sbjct: 384 ILSNIYAAAGMWKDVFRVR 402
>ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 124 bits (310), Expect = 2e-26
Identities = 55/79 (69%), Positives = 71/79 (89%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GR+G++++ALD+I++MP+EPT A+W SLLGACR+H +S+GEVVA+KLLDMEP NA NYV
Sbjct: 390 GRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYV 449
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSNIYAA+G W+DV RVR
Sbjct: 450 ILSNIYAAAGMWKDVFRVR 468
>ref|XP_006656246.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Oryza brachyantha]
Length = 438
Score = 122 bits (306), Expect = 5e-26
Identities = 54/79 (68%), Positives = 71/79 (89%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GR+GR+E+AL++I+NMP EPT ++W SLLGACR+HA + +GE+VA+KLL+MEP+NA NYV
Sbjct: 214 GRSGRLEKALNLIENMPLEPTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYV 273
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSNIYAASG W+DV +VR
Sbjct: 274 ILSNIYAASGMWKDVFKVR 292
>gb|EOY09401.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 718
Score = 120 bits (302), Expect = 1e-25
Identities = 53/79 (67%), Positives = 68/79 (86%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GRAGR+EEA + IK MP+EPT+ALW SLLGACR+H+ I IGE V R+LL++EP+NA NYV
Sbjct: 362 GRAGRVEEAFEFIKKMPFEPTAALWGSLLGACRVHSNIDIGEFVGRRLLEIEPENAGNYV 421
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSN++A++GRW+DV VR
Sbjct: 422 ILSNLFASAGRWEDVRMVR 440
>dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding
protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 119 bits (299), Expect = 3e-25
Identities = 52/79 (65%), Positives = 71/79 (89%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GR+GR+E+AL++I+NMP+E T ++W SLLGACR+HA + +GE+VA+KLL+MEP+NA NYV
Sbjct: 391 GRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYV 450
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSNIYAA+G W+DV +VR
Sbjct: 451 ILSNIYAAAGMWKDVFKVR 469
>ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa
Japonica Group]
Length = 590
Score = 119 bits (299), Expect = 3e-25
Identities = 52/79 (65%), Positives = 71/79 (89%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GR+GR+E+AL++I+NMP+E T ++W SLLGACR+HA + +GE+VA+KLL+MEP+NA NYV
Sbjct: 359 GRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYV 418
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSNIYAA+G W+DV +VR
Sbjct: 419 ILSNIYAAAGMWKDVFKVR 437
>gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 119 bits (299), Expect = 3e-25
Identities = 52/79 (65%), Positives = 71/79 (89%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GR+GR+E+AL++I+NMP+E T ++W SLLGACR+HA + +GE+VA+KLL+MEP+NA NYV
Sbjct: 359 GRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYV 418
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSNIYAA+G W+DV +VR
Sbjct: 419 ILSNIYAAAGMWKDVFKVR 437
>ref|XP_004965888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Setaria italica]
Length = 608
Score = 119 bits (297), Expect = 5e-25
Identities = 52/79 (65%), Positives = 69/79 (87%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GR+GR+++AL++I+ MP+EPT A+W SLLGACR+H + +GE VA+KLL++EP+NA NYV
Sbjct: 384 GRSGRLQKALNLIQKMPFEPTRAIWGSLLGACRVHVNVHVGEFVAQKLLEIEPENAGNYV 443
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSNIYAASG W+DV RVR
Sbjct: 444 ILSNIYAASGMWKDVFRVR 462
>ref|XP_002322694.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222867324|gb|EEF04455.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 586
Score = 118 bits (295), Expect = 9e-25
Identities = 51/79 (64%), Positives = 68/79 (86%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GRAGR+EEA ++IK MP+EPT+A+W SLLGACR+H+ +IGE V +LL++EP+NA NYV
Sbjct: 362 GRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYV 421
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSN+YA++GRW+DV VR
Sbjct: 422 ILSNLYASAGRWEDVRNVR 440
>ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 117 bits (294), Expect = 1e-24
Identities = 52/79 (65%), Positives = 66/79 (83%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GRAGR+EEA + IK MP+EPT+A+W SLLGACR+H + IGE VAR+LL++E +NA NYV
Sbjct: 829 GRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYV 888
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSN+YA++GRW DV VR
Sbjct: 889 ILSNLYASAGRWDDVRTVR 907
>emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 117 bits (294), Expect = 1e-24
Identities = 52/79 (65%), Positives = 66/79 (83%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GRAGR+EEA + IK MP+EPT+A+W SLLGACR+H + IGE VAR+LL++E +NA NYV
Sbjct: 362 GRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYV 421
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSN+YA++GRW DV VR
Sbjct: 422 ILSNLYASAGRWDDVRTVR 440
>ref|XP_006421479.1| hypothetical protein CICLE_v10006760mg [Citrus clementina]
gi|557523352|gb|ESR34719.1| hypothetical protein
CICLE_v10006760mg [Citrus clementina]
Length = 688
Score = 116 bits (291), Expect = 3e-24
Identities = 51/79 (64%), Positives = 68/79 (86%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GRAGR+ EAL+ IKNMP+EPT+A+ SLLGACR+H + IGE V ++L+++EP+NA NYV
Sbjct: 362 GRAGRVGEALEFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYV 421
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSN+YA++GRW+DV RVR
Sbjct: 422 ILSNLYASAGRWEDVTRVR 440
>ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein
SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 116 bits (291), Expect = 3e-24
Identities = 50/79 (63%), Positives = 69/79 (87%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GR+G++++AL++I+ MP++PT A+W SLLGACR+H + +GE VA+KLLD+EP+NA NYV
Sbjct: 364 GRSGQLQKALNLIEKMPFQPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYV 423
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSNIYAA+G W+DV RVR
Sbjct: 424 ILSNIYAAAGMWKDVFRVR 442
>ref|XP_006490046.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Citrus sinensis]
Length = 644
Score = 115 bits (288), Expect = 6e-24
Identities = 50/79 (63%), Positives = 68/79 (86%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GRAGR+ EAL+ IK MP+EPT+A+ SLLGACR+H+ + IGE V ++L+++EP+NA NYV
Sbjct: 420 GRAGRVGEALEFIKKMPFEPTAAILGSLLGACRVHSNVDIGEFVGQRLMEIEPENAGNYV 479
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSN+YA++GRW+DV RVR
Sbjct: 480 ILSNLYASAGRWEDVTRVR 498
>ref|XP_004497943.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g13770, mitochondrial-like
[Cicer arietinum]
Length = 642
Score = 115 bits (288), Expect = 6e-24
Identities = 49/79 (62%), Positives = 66/79 (83%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GR+GR+EEA + IK MP+EPT+A+W SLLGACR+H+ + IGE V +LL++EP NA NYV
Sbjct: 418 GRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFVGHRLLEIEPANAGNYV 477
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSN+YA++GRW+DV +R
Sbjct: 478 ILSNLYASAGRWEDVRSLR 496
>ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 840
Score = 115 bits (287), Expect = 8e-24
Identities = 48/79 (60%), Positives = 67/79 (84%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GR+GR+EEA + IK MP+EPT+A+W SLLGACR+H+ + IGE ++LL++EP NA NYV
Sbjct: 616 GRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYV 675
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSN+YA++GRW+DV+ +R
Sbjct: 676 ILSNLYASAGRWEDVSSLR 694
>ref|XP_004306162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 637
Score = 114 bits (286), Expect = 1e-23
Identities = 50/79 (63%), Positives = 66/79 (83%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GR+GR+EEA + IK MP EPT+A+W SLLGACR+H+ + IGE V +LLD+EP+NA NYV
Sbjct: 413 GRSGRVEEAFEFIKKMPSEPTAAIWGSLLGACRVHSNVKIGEFVGFQLLDIEPENAGNYV 472
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSN++A++GRW+DV VR
Sbjct: 473 ILSNLFASAGRWEDVRTVR 491
>ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 114 bits (286), Expect = 1e-23
Identities = 47/79 (59%), Positives = 67/79 (84%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GRAGR+EEA D IK MP+ PT+A+W SLLG+CR+H+ + IG +V +KLL++EP+NA NYV
Sbjct: 414 GRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYV 473
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSN+YA++G+W+D+ +R
Sbjct: 474 ILSNLYASAGKWEDMRNIR 492
>ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 114 bits (286), Expect = 1e-23
Identities = 47/79 (59%), Positives = 67/79 (84%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GRAGR+EEA D IK MP+ PT+A+W SLLG+CR+H+ + IG +V +KLL++EP+NA NYV
Sbjct: 442 GRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYV 501
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSN+YA++G+W+D+ +R
Sbjct: 502 ILSNLYASAGKWEDMRNIR 520
>gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 111 bits (278), Expect = 9e-23
Identities = 49/79 (62%), Positives = 67/79 (84%)
Frame = +2
Query: 2 GRAGRIEEALDVIKNMPYEPTSALWNSLLGACRLHAKISIGEVVARKLLDMEPDNASNYV 181
GR+G++E+AL +I+ MP++PT A+W SLLGACR+HA + +GE VA+KL D+EP+NA NYV
Sbjct: 386 GRSGQLEKALLLIQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYV 445
Query: 182 ILSNIYAASGRWQDVARVR 238
ILSNIYAA+ W+DV R+R
Sbjct: 446 ILSNIYAAARMWKDVFRLR 464