BLASTX nr result

ID: Zingiber23_contig00052050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00052050
         (352 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004240842.1| PREDICTED: ABC transporter I family member 6...    57   4e-09
gb|EPS70007.1| hypothetical protein M569_04754, partial [Genlise...    54   3e-08
ref|XP_006357317.1| PREDICTED: ABC transporter I family member 6...    54   3e-08
ref|XP_004146320.1| PREDICTED: ABC transporter I family member 6...    50   2e-07
ref|XP_004296719.1| PREDICTED: ABC transporter I family member 6...    50   5e-07
ref|XP_002310964.1| ABC transporter family protein [Populus tric...    49   6e-07
ref|XP_003557983.1| PREDICTED: ABC transporter I family member 6...    46   4e-06
ref|XP_006298079.1| hypothetical protein CARUB_v10014123mg [Caps...    46   5e-06
ref|XP_002523637.1| abc transporter, putative [Ricinus communis]...    46   6e-06

>ref|XP_004240842.1| PREDICTED: ABC transporter I family member 6, chloroplastic-like
           [Solanum lycopersicum]
          Length = 312

 Score = 56.6 bits (135), Expect(2) = 4e-09
 Identities = 27/60 (45%), Positives = 40/60 (66%)
 Frame = +2

Query: 83  LRASLREKAALTIDSPSHSGAPFSEGPPRVLLEVKDLKEAIKDSGQEILRGVNLIIHEGE 262
           +R +L  KA ++++SPS S     +  P+VLLEV+DL   I +S Q+IL GVNL + +GE
Sbjct: 34  VRCTLTVKATVSVESPSSSSTDCRDDSPKVLLEVRDLSAVIVESKQQILNGVNLTVRQGE 93



 Score = 29.6 bits (65), Expect(2) = 4e-09
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +3

Query: 312 IHAIMGKNGSGKS 350
           +HA+MGKNGSGKS
Sbjct: 94  VHAVMGKNGSGKS 106


>gb|EPS70007.1| hypothetical protein M569_04754, partial [Genlisea aurea]
          Length = 268

 Score = 53.9 bits (128), Expect(2) = 3e-08
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = +2

Query: 107 AALTIDSPSHSGAPFSEGPPRVLLEVKDLKEAIKDSGQEILRGVNLIIHEGE 262
           AA+ ++SPS S A    G P++LLEV+DL  AI ++ + IL+GVNL + EGE
Sbjct: 1   AAVAVESPSSSSADCGGGAPKLLLEVRDLTAAIVETKKTILKGVNLTVREGE 52



 Score = 29.6 bits (65), Expect(2) = 3e-08
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +3

Query: 312 IHAIMGKNGSGKS 350
           +HA+MGKNGSGKS
Sbjct: 53  VHAVMGKNGSGKS 65


>ref|XP_006357317.1| PREDICTED: ABC transporter I family member 6, chloroplastic-like
           [Solanum tuberosum]
          Length = 435

 Score = 53.5 bits (127), Expect(2) = 3e-08
 Identities = 26/60 (43%), Positives = 39/60 (65%)
 Frame = +2

Query: 83  LRASLREKAALTIDSPSHSGAPFSEGPPRVLLEVKDLKEAIKDSGQEILRGVNLIIHEGE 262
           +R +   KA ++++SPS S     +  P+VLLEV+DL   I +S Q+IL GVNL + +GE
Sbjct: 157 VRCTFTVKATVSVESPSSSATDRCDDSPKVLLEVRDLCAVIVESKQQILNGVNLTVRQGE 216



 Score = 29.6 bits (65), Expect(2) = 3e-08
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +3

Query: 312 IHAIMGKNGSGKS 350
           +HA+MGKNGSGKS
Sbjct: 217 VHAVMGKNGSGKS 229


>ref|XP_004146320.1| PREDICTED: ABC transporter I family member 6, chloroplastic-like
           [Cucumis sativus] gi|449523329|ref|XP_004168676.1|
           PREDICTED: ABC transporter I family member 6,
           chloroplastic-like [Cucumis sativus]
          Length = 329

 Score = 50.4 bits (119), Expect(2) = 2e-07
 Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
 Frame = +2

Query: 80  SLRASLREKAAL--TIDSPSHSGAPFSEGPPRVLLEVKDLKEAIKDSGQEILRGVNLIIH 253
           +LR S+R   A    ++SPS S   FS+    +LLEVKDL   I ++ QEIL+GVNL+++
Sbjct: 51  NLRRSVRIATASLSAVNSPSTS---FSDSQKSLLLEVKDLTAVIAETKQEILKGVNLVVY 107

Query: 254 EGE 262
           EGE
Sbjct: 108 EGE 110



 Score = 30.0 bits (66), Expect(2) = 2e-07
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = +3

Query: 312 IHAIMGKNGSGKS 350
           +HAIMGKNGSGKS
Sbjct: 111 VHAIMGKNGSGKS 123


>ref|XP_004296719.1| PREDICTED: ABC transporter I family member 6, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 315

 Score = 49.7 bits (117), Expect(2) = 5e-07
 Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
 Frame = +2

Query: 83  LRASLREKAALT--IDSPSHSGAPFSEGPPRVLLEVKDLKEAIKDSGQEILRGVNLIIHE 256
           LR S   +A+L+  +DSP H+    S+   +++L+VKDL   I +S Q+IL+GVNL ++E
Sbjct: 39  LRCSRPNRASLSSAVDSPPHTSG--SQPEKKLILQVKDLTAVIAESKQQILKGVNLTVYE 96

Query: 257 GE 262
           GE
Sbjct: 97  GE 98



 Score = 29.6 bits (65), Expect(2) = 5e-07
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +3

Query: 312 IHAIMGKNGSGKS 350
           +HA+MGKNGSGKS
Sbjct: 99  VHAVMGKNGSGKS 111


>ref|XP_002310964.1| ABC transporter family protein [Populus trichocarpa]
           gi|222850784|gb|EEE88331.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 327

 Score = 48.9 bits (115), Expect(2) = 6e-07
 Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
 Frame = +2

Query: 11  PPSVRSFLNTPRLRSALGGHGAT-SLRA-SLREKAALTIDSPS--HSGAPFSE-GPPRVL 175
           PP ++  L+T  L S L  + AT SLR  S R   A+T   P+   +G   ++ G  R L
Sbjct: 22  PPPLK--LSTLPLNSNLFTYSATRSLRLRSTRRLPAVTASVPAVETTGTTGTDSGKKRPL 79

Query: 176 LEVKDLKEAIKDSGQEILRGVNLIIHEGE 262
           LEVKDL   I +S QEIL+GVN++++EGE
Sbjct: 80  LEVKDLTAVIAESKQEILKGVNVVLYEGE 108



 Score = 30.0 bits (66), Expect(2) = 6e-07
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = +3

Query: 312 IHAIMGKNGSGKS 350
           +HAIMGKNGSGKS
Sbjct: 109 VHAIMGKNGSGKS 121


>ref|XP_003557983.1| PREDICTED: ABC transporter I family member 6, chloroplastic-like
           [Brachypodium distachyon]
          Length = 307

 Score = 46.2 bits (108), Expect(2) = 4e-06
 Identities = 21/42 (50%), Positives = 32/42 (76%)
 Frame = +2

Query: 137 SGAPFSEGPPRVLLEVKDLKEAIKDSGQEILRGVNLIIHEGE 262
           + A  +E   R+LLEV+ L  ++K++GQ+IL+GV+L IHEGE
Sbjct: 46  ASAAAAESAGRLLLEVRGLTASVKETGQQILKGVDLTIHEGE 87



 Score = 30.0 bits (66), Expect(2) = 4e-06
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = +3

Query: 312 IHAIMGKNGSGKS 350
           +HAIMGKNGSGKS
Sbjct: 88  VHAIMGKNGSGKS 100


>ref|XP_006298079.1| hypothetical protein CARUB_v10014123mg [Capsella rubella]
           gi|482566788|gb|EOA30977.1| hypothetical protein
           CARUB_v10014123mg [Capsella rubella]
          Length = 338

 Score = 46.2 bits (108), Expect(2) = 5e-06
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
 Frame = +2

Query: 74  ATSLRASLRE--KAALTIDSPSHSGAPF---SEGPPRVLLEVKDLKEAIKDSGQEILRGV 238
           A +LR + RE   AA ++ S   S +     ++G    LLEVKDL+  I +S QEIL+GV
Sbjct: 53  APTLRTTRREVTTAASSVSSAVDSDSLVEDRNDGGRIPLLEVKDLRAVIAESRQEILKGV 112

Query: 239 NLIIHEGE 262
           NL+++EGE
Sbjct: 113 NLVVYEGE 120



 Score = 29.6 bits (65), Expect(2) = 5e-06
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +3

Query: 312 IHAIMGKNGSGKS 350
           +HA+MGKNGSGKS
Sbjct: 121 VHAVMGKNGSGKS 133


>ref|XP_002523637.1| abc transporter, putative [Ricinus communis]
           gi|223537089|gb|EEF38723.1| abc transporter, putative
           [Ricinus communis]
          Length = 326

 Score = 45.8 bits (107), Expect(2) = 6e-06
 Identities = 21/30 (70%), Positives = 25/30 (83%)
 Frame = +2

Query: 173 LLEVKDLKEAIKDSGQEILRGVNLIIHEGE 262
           LLEVKDL   I +S QEIL+GVNL++HEGE
Sbjct: 78  LLEVKDLTAVIAESKQEILKGVNLVVHEGE 107



 Score = 29.6 bits (65), Expect(2) = 6e-06
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +3

Query: 312 IHAIMGKNGSGKS 350
           +HA+MGKNGSGKS
Sbjct: 108 VHAVMGKNGSGKS 120


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