BLASTX nr result
ID: Zingiber23_contig00051446
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00051446
(311 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 97 3e-18
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 95 1e-17
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 91 2e-16
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A... 91 2e-16
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 89 5e-16
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 89 5e-16
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 89 6e-16
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 88 1e-15
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 88 1e-15
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 87 3e-15
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 87 3e-15
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 86 4e-15
gb|ABW81094.1| RT6non-ltr [Cleome spinosa] 86 5e-15
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 86 5e-15
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660... 86 7e-15
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 85 9e-15
ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein A... 85 1e-14
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A... 85 1e-14
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 84 1e-14
ref|XP_002331075.1| predicted protein [Populus trichocarpa] 83 3e-14
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/97 (45%), Positives = 64/97 (65%)
Frame = -1
Query: 296 FGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLRIANYG 117
F +GL NPQK + AG+D K +L++ GFQEG+ PF+YLG+P+ ++KL +Y
Sbjct: 99 FSKATGLLVNPQKCSLLCAGIDAVTKREILEVSGFQEGQLPFKYLGVPVTSKKLSTIHYS 158
Query: 116 PLLEVIARKINSWPKHTLSYAGRLELVGTVLQASTHF 6
PL++ I KI W LSYAGRL+LV +V+ A T++
Sbjct: 159 PLIDKIVGKIKHWTARLLSYAGRLQLVNSVMFALTNY 195
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 94.7 bits (234), Expect = 1e-17
Identities = 46/102 (45%), Positives = 66/102 (64%)
Frame = -1
Query: 311 DCLNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLR 132
D N F GL NP K +Y VD ++K +LL + GF+EGK PFRYLGIPL+++KL
Sbjct: 536 DKFNTFLRSMGLHVNPSKCNIYCGSVDINVKEQLLLISGFKEGKMPFRYLGIPLSSKKLN 595
Query: 131 IANYGPLLEVIARKINSWPKHTLSYAGRLELVGTVLQASTHF 6
I +Y L++ I +I W LSYAGR++L+ +V+ A+ +F
Sbjct: 596 IKHYQVLIDKIVGRITHWSAGLLSYAGRVQLIQSVIFATINF 637
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 90.9 bits (224), Expect = 2e-16
Identities = 41/95 (43%), Positives = 62/95 (65%)
Frame = -1
Query: 308 CLNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLRI 129
C +F SGL+AN K+ +Y GV ++ +++Q LG+ + PF+YLG+PL+++KL
Sbjct: 517 CFTEFSQASGLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNT 576
Query: 128 ANYGPLLEVIARKINSWPKHTLSYAGRLELVGTVL 24
+ PL+E + +INSW LSYAGR +LV TVL
Sbjct: 577 IQWYPLIEKVMARINSWTAKKLSYAGRAQLVKTVL 611
>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 239
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/100 (43%), Positives = 60/100 (60%)
Frame = -1
Query: 305 LNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLRIA 126
L F +SGL N K+ +Y AG+ + + QL GF G FPFRYLG+PL + +L +
Sbjct: 48 LQHFCRVSGLSINSDKSAIYSAGIRPHELSHIQQLTGFNLGGFPFRYLGVPLLSSRLNVC 107
Query: 125 NYGPLLEVIARKINSWPKHTLSYAGRLELVGTVLQASTHF 6
+Y PLL I I W + +LSYAG+LEL+ V+Q +F
Sbjct: 108 HYAPLLSKITGLIQGWSRKSLSYAGKLELIRAVIQGIVNF 147
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 89.4 bits (220), Expect = 5e-16
Identities = 44/102 (43%), Positives = 64/102 (62%)
Frame = -1
Query: 311 DCLNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLR 132
+ L+ F SGL+ N K+Q++ AG+D S + GF G FP RYLG+PL KLR
Sbjct: 577 ETLDDFADWSGLKVNKDKSQLFQAGLDLS-ERITSAAYGFPAGTFPIRYLGLPLMCRKLR 635
Query: 131 IANYGPLLEVIARKINSWPKHTLSYAGRLELVGTVLQASTHF 6
IA+YGPLLE ++ ++ SW LS+AGR +L+ +V+ +F
Sbjct: 636 IADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINF 677
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 89.4 bits (220), Expect = 5e-16
Identities = 44/102 (43%), Positives = 64/102 (62%)
Frame = -1
Query: 311 DCLNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLR 132
+ L+ F SGL+ N K+Q++ AG+D S + GF G FP RYLG+PL KLR
Sbjct: 577 ETLDDFADWSGLKVNKDKSQLFQAGLDLS-ERITSAAYGFPAGTFPIRYLGLPLMCRKLR 635
Query: 131 IANYGPLLEVIARKINSWPKHTLSYAGRLELVGTVLQASTHF 6
IA+YGPLLE ++ ++ SW LS+AGR +L+ +V+ +F
Sbjct: 636 IADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINF 677
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 89.0 bits (219), Expect = 6e-16
Identities = 44/100 (44%), Positives = 64/100 (64%)
Frame = -1
Query: 305 LNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLRIA 126
L F +SGL N +K+ VY AG++ + K L GF G FPFRYLG+PL KLR +
Sbjct: 718 LESFKNLSGLEMNTEKSAVYTAGLEDTDKEDTLAF-GFVNGTFPFRYLGLPLLHRKLRRS 776
Query: 125 NYGPLLEVIARKINSWPKHTLSYAGRLELVGTVLQASTHF 6
+Y L++ IA + N W TLS+AGRL+L+ +V+ ++ +F
Sbjct: 777 DYSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNF 816
>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
Length = 947
Score = 88.2 bits (217), Expect = 1e-15
Identities = 38/100 (38%), Positives = 61/100 (61%)
Frame = -1
Query: 305 LNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLRIA 126
+N+F +GL NP K ++Y GVD + KN++ Q+ ++EG+ P RYLG+PL ++KL I
Sbjct: 538 INKFSATTGLVVNPNKCRIYFGGVDGTTKNKIQQISSYEEGQLPVRYLGVPLTSKKLNIK 597
Query: 125 NYGPLLEVIARKINSWPKHTLSYAGRLELVGTVLQASTHF 6
Y PL++ I +I W L+ GR+++V + A F
Sbjct: 598 YYLPLIDKITTRIRHWTSKLLNMTGRVQMVNCTITAIVQF 637
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 87.8 bits (216), Expect = 1e-15
Identities = 40/98 (40%), Positives = 64/98 (65%)
Frame = -1
Query: 299 QFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLRIANY 120
+F G SGL + +K+ +Y+AGV +N +L F G+ P RYLG+PL +++ A+Y
Sbjct: 300 EFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADY 359
Query: 119 GPLLEVIARKINSWPKHTLSYAGRLELVGTVLQASTHF 6
PLL+ + KI+SW +LSYAGRL L+ +V+ + ++F
Sbjct: 360 SPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNF 397
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/102 (43%), Positives = 61/102 (59%)
Frame = -1
Query: 311 DCLNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLR 132
+ L F G SGL N KTQ+Y AG+ S + + GF+ G P RYLG+PL + KL
Sbjct: 614 ESLEDFAGWSGLLMNTNKTQLYHAGLSQSESDSMASY-GFKLGSLPVRYLGLPLMSRKLT 672
Query: 131 IANYGPLLEVIARKINSWPKHTLSYAGRLELVGTVLQASTHF 6
IA Y PL+E I + NSW LS+AGR++L+ +V+ +F
Sbjct: 673 IAEYAPLIEKITARFNSWVVRLLSFAGRVQLLASVISGIVNF 714
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/98 (40%), Positives = 64/98 (65%)
Frame = -1
Query: 299 QFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLRIANY 120
+F G SGL+ + +K+ +Y+AGV S + + L F G+ P RYLG+PL +++ A+Y
Sbjct: 1024 EFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADY 1083
Query: 119 GPLLEVIARKINSWPKHTLSYAGRLELVGTVLQASTHF 6
PL+E + KI+SW +LSYAGRL L+ +V+ + +F
Sbjct: 1084 SPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANF 1121
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 86.3 bits (212), Expect = 4e-15
Identities = 41/98 (41%), Positives = 63/98 (64%)
Frame = -1
Query: 311 DCLNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLR 132
D + F +S L+AN ++++++AGVD + + +LQ+ F G P RYLGIPL KLR
Sbjct: 545 DAFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLR 604
Query: 131 IANYGPLLEVIARKINSWPKHTLSYAGRLELVGTVLQA 18
+ + PLL+ I +I SW LS+AGRL+L+ +VL +
Sbjct: 605 MQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSS 642
>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
Length = 459
Score = 85.9 bits (211), Expect = 5e-15
Identities = 40/96 (41%), Positives = 59/96 (61%)
Frame = -1
Query: 311 DCLNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLR 132
+CLN FG SGL N K ++++ G+ S K L +G G FP +YLG+P+ +L
Sbjct: 87 NCLNWFGRNSGLEVNTGKCEMFLGGLTDSEKQELSSCMGITLGNFPMKYLGLPVNTHRLT 146
Query: 131 IANYGPLLEVIARKINSWPKHTLSYAGRLELVGTVL 24
A+Y PLLE I K+++W LSYAG+++LV V+
Sbjct: 147 KADYEPLLEKIRAKVSNWSSKLLSYAGKIQLVSVVI 182
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 85.9 bits (211), Expect = 5e-15
Identities = 41/94 (43%), Positives = 62/94 (65%)
Frame = -1
Query: 305 LNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLRIA 126
L+ F SGL N +KT++++ G++ + + L ++GF G P RYLG+ L+ +L +
Sbjct: 172 LDSFSRASGLYLNTEKTEIFLRGLNGTEASTLCAVIGFTRGYLPVRYLGVSLSPVRLTKS 231
Query: 125 NYGPLLEVIARKINSWPKHTLSYAGRLELVGTVL 24
+Y PLL+ + KINSW LSYAGRL+LVGTV+
Sbjct: 232 DYQPLLDRVKAKINSWTTRYLSYAGRLQLVGTVI 265
>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
Length = 303
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/100 (40%), Positives = 59/100 (59%)
Frame = -1
Query: 305 LNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLRIA 126
L F + GL + K+ +Y + + T + + QL GF G FPFRYLG+PL + +L +
Sbjct: 48 LQHFCRVLGLSISSDKSSIYSSSIRTHELSHIQQLTGFSLGGFPFRYLGVPLLSSRLNVC 107
Query: 125 NYGPLLEVIARKINSWPKHTLSYAGRLELVGTVLQASTHF 6
+Y PLL I I W + +LSYAG+LEL+ V+Q +F
Sbjct: 108 HYAPLLSKITGLIQGWSRKSLSYAGKLELIRAVIQGIVNF 147
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/102 (42%), Positives = 62/102 (60%)
Frame = -1
Query: 311 DCLNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLR 132
+ L+ F SGL+ N K+ +Y+AG++ L++ GF G P RYLG+PL KLR
Sbjct: 717 ETLDDFASWSGLKVNKDKSHLYLAGLN-QLESNANAAYGFPIGTLPIRYLGLPLMNRKLR 775
Query: 131 IANYGPLLEVIARKINSWPKHTLSYAGRLELVGTVLQASTHF 6
IA Y PLLE I + SW LS+AGR++L+ +V+ S +F
Sbjct: 776 IAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINF 817
>ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 192
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/100 (41%), Positives = 58/100 (58%)
Frame = -1
Query: 305 LNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLRIA 126
L F +SGL + K+ +Y G+ + + QL GF G FPFRYLG+PL + +L +
Sbjct: 5 LQHFCRVSGLSISSDKSAIYSTGIRPHELSHIQQLTGFSLGDFPFRYLGVPLLSSRLNVC 64
Query: 125 NYGPLLEVIARKINSWPKHTLSYAGRLELVGTVLQASTHF 6
+Y LL I I W K +LSYAG+LEL+ V+Q +F
Sbjct: 65 HYALLLSKITGLIQGWSKKSLSYAGKLELIRAVIQGIVNF 104
>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 316
Score = 84.7 bits (208), Expect = 1e-14
Identities = 42/100 (42%), Positives = 58/100 (58%)
Frame = -1
Query: 305 LNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLRIA 126
L F +SGL + K+ +Y AG+ + + QL GF G FPFRYLG PL + +L +
Sbjct: 81 LQHFCRVSGLSISSDKSAIYSAGIRPYELSHIQQLTGFSLGGFPFRYLGAPLLSSRLNVC 140
Query: 125 NYGPLLEVIARKINSWPKHTLSYAGRLELVGTVLQASTHF 6
+Y PLL I I W K +LSY G+LEL+ V+Q +F
Sbjct: 141 HYAPLLYKIVGLIQGWNKKSLSYVGKLELIKAVIQGIMNF 180
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 84.3 bits (207), Expect = 1e-14
Identities = 41/100 (41%), Positives = 60/100 (60%)
Frame = -1
Query: 305 LNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLRIA 126
LNQF GL+ +KT +Y+AGV + + F GK P RYLG+PL ++L +
Sbjct: 446 LNQFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTS 505
Query: 125 NYGPLLEVIARKINSWPKHTLSYAGRLELVGTVLQASTHF 6
+Y PL++ I R+I W LS+AGRL L+ +VL + T+F
Sbjct: 506 DYSPLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSITNF 545
>ref|XP_002331075.1| predicted protein [Populus trichocarpa]
Length = 517
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/94 (38%), Positives = 63/94 (67%)
Frame = -1
Query: 305 LNQFGGISGLRANPQKTQVYMAGVDTSLKNRLLQLLGFQEGKFPFRYLGIPLAAEKLRIA 126
L +F +SGL NP K+ ++++GV + + +++ +LGF+EG+ P +YLG+PL + +L+
Sbjct: 12 LTKFQDLSGLYPNPNKSDIFLSGVLNAEREQIIHILGFREGELPMKYLGVPLLSSRLKAI 71
Query: 125 NYGPLLEVIARKINSWPKHTLSYAGRLELVGTVL 24
L++ I K+ W TLSYAGR++L+ +VL
Sbjct: 72 YCKGLVDRITSKVRHWTCRTLSYAGRVQLINSVL 105