BLASTX nr result
ID: Zingiber23_contig00051431
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00051431
(458 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containi... 202 5e-50
ref|XP_006651805.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 196 4e-48
gb|EAZ28544.1| hypothetical protein OsJ_12524 [Oryza sativa Japo... 195 6e-48
gb|AAP12991.1| hypothetical protein [Oryza sativa Japonica Group... 195 6e-48
ref|XP_006299672.1| hypothetical protein CARUB_v10015860mg [Caps... 193 2e-47
ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containi... 192 3e-47
ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containi... 192 3e-47
ref|XP_003559839.1| PREDICTED: pentatricopeptide repeat-containi... 192 3e-47
ref|XP_006382794.1| hypothetical protein POPTR_0005s05510g [Popu... 192 4e-47
ref|XP_002328495.1| predicted protein [Populus trichocarpa] 192 4e-47
ref|XP_002466476.1| hypothetical protein SORBIDRAFT_01g008465 [S... 191 7e-47
ref|NP_001147435.1| methyltransferase small domain [Zea mays] gi... 190 1e-46
ref|XP_006408155.1| hypothetical protein EUTSA_v10020244mg [Eutr... 188 7e-46
tpg|DAA51276.1| TPA: methyltransferase small domain protein [Zea... 187 1e-45
ref|NP_187126.1| pentatricopeptide repeat-containing protein [Ar... 187 1e-45
ref|XP_002884467.1| pentatricopeptide repeat-containing protein ... 186 2e-45
ref|XP_006471681.1| PREDICTED: pentatricopeptide repeat-containi... 185 5e-45
ref|XP_006432926.1| hypothetical protein CICLE_v10000494mg [Citr... 185 5e-45
ref|XP_004981816.1| PREDICTED: pentatricopeptide repeat-containi... 184 1e-44
ref|XP_004304748.1| PREDICTED: pentatricopeptide repeat-containi... 181 7e-44
>ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 202 bits (513), Expect = 5e-50
Identities = 96/152 (63%), Positives = 118/152 (77%)
Frame = +2
Query: 2 ESVRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIER 181
E++ PD VT + LV AAE G L HGR IHGWV + +DAFLGSA IDMY KCGSI+R
Sbjct: 356 ENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKR 415
Query: 182 SLVIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSH 361
+ ++F V++KDVT+WT MITG AFHGYG+KA++LF +MQE +MPN+VT VA LTACSH
Sbjct: 416 ACMVFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEMQEY-VMPNQVTFVAVLTACSH 474
Query: 362 AGLVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
+G V QG IF SMK+RY +EPG EHYGC+VD
Sbjct: 475 SGFVSQGLRIFNSMKERYGIEPGVEHYGCLVD 506
Score = 60.1 bits (144), Expect = 3e-07
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 33/158 (20%)
Frame = +2
Query: 8 VRPDRVTAVALVCTAAETGELSHGRCIHGWVHKG--YGALDAFLGSALIDMYSKCGSIER 181
++PD T + L+ G+ G+ +H W+ + + + L +AL+DMY KC +
Sbjct: 224 LKPDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRI 283
Query: 182 SLVIFNHVSKKDVTLWTAMITGLA--------------------------FHGYGAK--- 274
+ IFN + +KD W MI G A GY K
Sbjct: 284 AQSIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDC 343
Query: 275 --AMELFVKMQEEGLMPNKVTLVAALTACSHAGLVDQG 382
LF M E + P+ VT++ ++A + G + G
Sbjct: 344 LMVQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHG 381
>ref|XP_006651805.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04750, mitochondrial-like [Oryza
brachyantha]
Length = 640
Score = 196 bits (497), Expect = 4e-48
Identities = 91/150 (60%), Positives = 116/150 (77%)
Frame = +2
Query: 8 VRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIERSL 187
VRPD+VTAV L+ A G + G+ IHGWV K +G DAFL SAL+DMY KCG+++ +
Sbjct: 352 VRPDKVTAVTLISAVAGKGTPNLGKSIHGWVVKEHGTQDAFLASALVDMYCKCGNVKLAH 411
Query: 188 VIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSHAG 367
+F KDVTLWTAMI+GLAFHG+G A++LF KMQ EG+ PN VTLV+ L+ACSHAG
Sbjct: 412 AVFEKAMDKDVTLWTAMISGLAFHGHGGIALDLFWKMQAEGIEPNGVTLVSVLSACSHAG 471
Query: 368 LVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
L+D+G +IF S+KQR+N+EPG EH+GCMVD
Sbjct: 472 LLDEGLKIFDSLKQRFNIEPGIEHFGCMVD 501
Score = 59.3 bits (142), Expect = 5e-07
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Frame = +2
Query: 2 ESVRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDA--FLGSALIDMYSKCGSI 175
+ V D+ TAVAL+ + GR +HG V + D L +AL+DMY+KCG +
Sbjct: 216 KGVGVDQYTAVALLACCGRLKKALLGRSVHGVVVRRIDVADRGLILSNALLDMYAKCGEM 275
Query: 176 ERSLVIFNHVSKKDVTLWTAMITGLAFHG-------YGAKA------------------- 277
+++ +F +KD W M+ G A G Y A++
Sbjct: 276 NKAMRVFGEAGEKDGISWNTMVAGFANAGMLDLASEYFAESPARDIISWNALLAGYARYK 335
Query: 278 -----MELFVKMQEEGLMPNKVTLVAALTACSHAGLVDQGTEI 391
M+LF M + P+KVT V ++A + G + G I
Sbjct: 336 EFTATMKLFDDMLVSCVRPDKVTAVTLISAVAGKGTPNLGKSI 378
>gb|EAZ28544.1| hypothetical protein OsJ_12524 [Oryza sativa Japonica Group]
Length = 559
Score = 195 bits (495), Expect = 6e-48
Identities = 92/151 (60%), Positives = 114/151 (75%)
Frame = +2
Query: 5 SVRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIERS 184
SV PD+VTAV L+ A G L+ R +HGWV K +G D+FL SAL+DMY KCGSI+ +
Sbjct: 241 SVIPDKVTAVTLISAVAGKGTLNSARSVHGWVVKEHGTQDSFLASALVDMYCKCGSIKLA 300
Query: 185 LVIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSHA 364
+F KDVTLWTAMI+GLAFHG+G A++LF KMQ EG PN VTLVA L+ACSHA
Sbjct: 301 YAVFEKAVDKDVTLWTAMISGLAFHGHGDVALDLFWKMQAEGTEPNGVTLVAVLSACSHA 360
Query: 365 GLVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
GL D+G +IF ++KQR+N+EPG EH+GCMVD
Sbjct: 361 GLFDEGCKIFDTLKQRFNIEPGVEHFGCMVD 391
Score = 59.7 bits (143), Expect = 4e-07
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 33/158 (20%)
Frame = +2
Query: 17 DRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDA--FLGSALIDMYSKCGSIERSLV 190
D+ TAVAL+ + GR +HG V + G D L +AL+DMY+KCG + ++
Sbjct: 111 DQYTAVALLACCGRLKKAVLGRSVHGVVVRRIGVADRGLILSNALLDMYAKCGEMNTAMR 170
Query: 191 IFNHVSKKDVTLWTAMITGLA--------------------------FHGYG-----AKA 277
+F+ ++D W M+ G A GY +
Sbjct: 171 VFDEAGERDGISWNTMVAGFANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFSAT 230
Query: 278 MELFVKMQEEGLMPNKVTLVAALTACSHAGLVDQGTEI 391
M LF M ++P+KVT V ++A + G ++ +
Sbjct: 231 MILFHDMLASSVIPDKVTAVTLISAVAGKGTLNSARSV 268
>gb|AAP12991.1| hypothetical protein [Oryza sativa Japonica Group]
gi|40539031|gb|AAR87288.1| putative PPR repeat
containing protein [Oryza sativa Japonica Group]
gi|108711017|gb|ABF98812.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
Length = 676
Score = 195 bits (495), Expect = 6e-48
Identities = 92/151 (60%), Positives = 114/151 (75%)
Frame = +2
Query: 5 SVRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIERS 184
SV PD+VTAV L+ A G L+ R +HGWV K +G D+FL SAL+DMY KCGSI+ +
Sbjct: 358 SVIPDKVTAVTLISAVAGKGTLNSARSVHGWVVKEHGTQDSFLASALVDMYCKCGSIKLA 417
Query: 185 LVIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSHA 364
+F KDVTLWTAMI+GLAFHG+G A++LF KMQ EG PN VTLVA L+ACSHA
Sbjct: 418 YAVFEKAVDKDVTLWTAMISGLAFHGHGDVALDLFWKMQAEGTEPNGVTLVAVLSACSHA 477
Query: 365 GLVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
GL D+G +IF ++KQR+N+EPG EH+GCMVD
Sbjct: 478 GLFDEGCKIFDTLKQRFNIEPGVEHFGCMVD 508
Score = 59.7 bits (143), Expect = 4e-07
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 33/158 (20%)
Frame = +2
Query: 17 DRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDA--FLGSALIDMYSKCGSIERSLV 190
D+ TAVAL+ + GR +HG V + G D L +AL+DMY+KCG + ++
Sbjct: 228 DQYTAVALLACCGRLKKAVLGRSVHGVVVRRIGVADRGLILSNALLDMYAKCGEMNTAMR 287
Query: 191 IFNHVSKKDVTLWTAMITGLA--------------------------FHGYG-----AKA 277
+F+ ++D W M+ G A GY +
Sbjct: 288 VFDEAGERDGISWNTMVAGFANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFSAT 347
Query: 278 MELFVKMQEEGLMPNKVTLVAALTACSHAGLVDQGTEI 391
M LF M ++P+KVT V ++A + G ++ +
Sbjct: 348 MILFHDMLASSVIPDKVTAVTLISAVAGKGTLNSARSV 385
>ref|XP_006299672.1| hypothetical protein CARUB_v10015860mg [Capsella rubella]
gi|482568381|gb|EOA32570.1| hypothetical protein
CARUB_v10015860mg [Capsella rubella]
Length = 651
Score = 193 bits (491), Expect = 2e-47
Identities = 91/152 (59%), Positives = 117/152 (76%)
Frame = +2
Query: 2 ESVRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIER 181
E ++PDRVT V+L+ AA G+LSHGR +HG V + DAFL SALIDMY KCG IER
Sbjct: 357 EKIKPDRVTMVSLISGAANNGDLSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIER 416
Query: 182 SLVIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSH 361
+ ++F ++KDVTLWT+MITGLAFHG G +A++LF MQEEG+MPNKVTL+A LTACSH
Sbjct: 417 AFMVFKTATEKDVTLWTSMITGLAFHGNGQQALQLFENMQEEGVMPNKVTLLAVLTACSH 476
Query: 362 AGLVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
+GLV+QG +F MK+++ +P EHYG +VD
Sbjct: 477 SGLVEQGLHVFNHMKEKFGFDPETEHYGSLVD 508
>ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 192 bits (489), Expect = 3e-47
Identities = 94/152 (61%), Positives = 113/152 (74%)
Frame = +2
Query: 2 ESVRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIER 181
E+V+PD+VT V L+ AE G L GR IHG K ++AF GSALIDMY KCGSIER
Sbjct: 290 ENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIER 349
Query: 182 SLVIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSH 361
+ VIFN + +KDVT WT MITG AFHG+G KA+ELF MQ E PN VT V+ L ACSH
Sbjct: 350 AFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAE-TKPNDVTFVSVLAACSH 408
Query: 362 AGLVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
+GLVD+G +IF SMK+RY++EPG EHYGC+VD
Sbjct: 409 SGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVD 440
Score = 73.6 bits (179), Expect = 3e-11
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 31/156 (19%)
Frame = +2
Query: 8 VRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKC------- 166
+ PD T + L+ + GE G+ +H + K G+ + L +AL+DMY KC
Sbjct: 160 LEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLAR 219
Query: 167 ------------------------GSIERSLVIFNHVSKKDVTLWTAMITGLAFHGYGAK 274
G +E + +FN + +D+ W ++I+G A +G
Sbjct: 220 KVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVT 279
Query: 275 AMELFVKMQEEGLMPNKVTLVAALTACSHAGLVDQG 382
LF +M E + P+KVT+V ++A + G +DQG
Sbjct: 280 VKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQG 315
>ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 192 bits (489), Expect = 3e-47
Identities = 94/152 (61%), Positives = 113/152 (74%)
Frame = +2
Query: 2 ESVRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIER 181
E+V+PD+VT V L+ AE G L GR IHG K ++AF GSALIDMY KCGSIER
Sbjct: 355 ENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIER 414
Query: 182 SLVIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSH 361
+ VIFN + +KDVT WT MITG AFHG+G KA+ELF MQ E PN VT V+ L ACSH
Sbjct: 415 AFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAE-TKPNDVTFVSVLAACSH 473
Query: 362 AGLVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
+GLVD+G +IF SMK+RY++EPG EHYGC+VD
Sbjct: 474 SGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVD 505
Score = 73.6 bits (179), Expect = 3e-11
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 31/156 (19%)
Frame = +2
Query: 8 VRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKC------- 166
+ PD T + L+ + GE G+ +H + K G+ + L +AL+DMY KC
Sbjct: 225 LEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLAR 284
Query: 167 ------------------------GSIERSLVIFNHVSKKDVTLWTAMITGLAFHGYGAK 274
G +E + +FN + +D+ W ++I+G A +G
Sbjct: 285 KVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVT 344
Query: 275 AMELFVKMQEEGLMPNKVTLVAALTACSHAGLVDQG 382
LF +M E + P+KVT+V ++A + G +DQG
Sbjct: 345 VKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQG 380
>ref|XP_003559839.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Brachypodium distachyon]
Length = 601
Score = 192 bits (489), Expect = 3e-47
Identities = 87/150 (58%), Positives = 114/150 (76%)
Frame = +2
Query: 8 VRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIERSL 187
VRPD+VTAV L+ A G L+ G+ +HGWV K +G DAFL S L+DMY KCG+++ +
Sbjct: 348 VRPDKVTAVTLISAAVSKGALNLGKSVHGWVLKEHGTQDAFLASTLVDMYCKCGNVKLAY 407
Query: 188 VIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSHAG 367
+F KDVTLWTAMI+GLAFHG+G +A++LF MQ EG+ PN VTLV L+ACSHAG
Sbjct: 408 AVFEKALDKDVTLWTAMISGLAFHGHGTEALDLFWNMQNEGVAPNGVTLVTVLSACSHAG 467
Query: 368 LVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
L+D+G EIF +M++R+N+EP EH+GCMVD
Sbjct: 468 LLDEGCEIFYTMQKRFNIEPRVEHFGCMVD 497
>ref|XP_006382794.1| hypothetical protein POPTR_0005s05510g [Populus trichocarpa]
gi|550338164|gb|ERP60591.1| hypothetical protein
POPTR_0005s05510g [Populus trichocarpa]
Length = 648
Score = 192 bits (488), Expect = 4e-47
Identities = 94/152 (61%), Positives = 116/152 (76%)
Frame = +2
Query: 2 ESVRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIER 181
E V PD VT ++LV A E+G L GR HGWV + LDAFLGSALIDMY KCGSIER
Sbjct: 360 EKVIPDTVTMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIER 419
Query: 182 SLVIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSH 361
+ +F ++KKDVT+WT MITGLAFHGYG+KA+ELF +MQE+ + P+ VT V+ L+ACSH
Sbjct: 420 ASRVFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEMQED-VSPDDVTFVSVLSACSH 478
Query: 362 AGLVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
+GLVDQG ++F SM Y +EPG EHYGC+VD
Sbjct: 479 SGLVDQGIKVFSSMTD-YGIEPGVEHYGCLVD 509
Score = 76.6 bits (187), Expect = 3e-12
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 33/158 (20%)
Frame = +2
Query: 8 VRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDA--FLGSALIDMYSKCGSIER 181
+ PD T + L+ + + G + G+ +HGW+ + + + LG+AL+DMY KC +E
Sbjct: 228 LEPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVEL 287
Query: 182 SLVIFNHVSKK-------------------------------DVTLWTAMITGLAFHGYG 268
+L F + +K D+ W +++TG A G
Sbjct: 288 ALRTFGALKEKDIVSWNMIVAGCAKVGEFEQARLFFYQMPCRDIVSWNSLVTGYACRGDF 347
Query: 269 AKAMELFVKMQEEGLMPNKVTLVAALTACSHAGLVDQG 382
A EL V M E ++P+ VT+++ ++A + +G +DQG
Sbjct: 348 ASVKELIVDMVMEKVIPDTVTMISLVSAATESGALDQG 385
>ref|XP_002328495.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 192 bits (488), Expect = 4e-47
Identities = 94/152 (61%), Positives = 116/152 (76%)
Frame = +2
Query: 2 ESVRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIER 181
E V PD VT ++LV A E+G L GR HGWV + LDAFLGSALIDMY KCGSIER
Sbjct: 292 EKVIPDTVTMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIER 351
Query: 182 SLVIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSH 361
+ +F ++KKDVT+WT MITGLAFHGYG+KA+ELF +MQE+ + P+ VT V+ L+ACSH
Sbjct: 352 ASRVFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEMQED-VSPDDVTFVSVLSACSH 410
Query: 362 AGLVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
+GLVDQG ++F SM Y +EPG EHYGC+VD
Sbjct: 411 SGLVDQGIKVFSSMTD-YGIEPGVEHYGCLVD 441
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 33/158 (20%)
Frame = +2
Query: 8 VRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDA--FLGSALIDMYSKC----- 166
+ PD T + L+ + + G + G+ +HGW+ + + + LG+AL+DMY KC
Sbjct: 160 LEPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVEL 219
Query: 167 --------------------------GSIERSLVIFNHVSKKDVTLWTAMITGLAFHGYG 268
G +E++ + F + +D+ W +++TG A G
Sbjct: 220 ALRTFGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDF 279
Query: 269 AKAMELFVKMQEEGLMPNKVTLVAALTACSHAGLVDQG 382
A EL V M E ++P+ VT+++ ++A + +G +DQG
Sbjct: 280 ASVKELIVDMVMEKVIPDTVTMISLVSAATESGALDQG 317
>ref|XP_002466476.1| hypothetical protein SORBIDRAFT_01g008465 [Sorghum bicolor]
gi|241920330|gb|EER93474.1| hypothetical protein
SORBIDRAFT_01g008465 [Sorghum bicolor]
Length = 599
Score = 191 bits (486), Expect = 7e-47
Identities = 88/150 (58%), Positives = 115/150 (76%)
Frame = +2
Query: 8 VRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIERSL 187
V PD+VTAV L+ AA G L+H + IHGWV K +G DAFL SAL+DM+ KCG+++ +
Sbjct: 355 VNPDKVTAVTLISVAAGKGSLNHAKSIHGWVVKQFGHQDAFLASALVDMHCKCGNVKVAY 414
Query: 188 VIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSHAG 367
+F KDVTLWTAMI+GLAF+G+G +A+ELF KMQ E + PN VTL+A L+ACSHAG
Sbjct: 415 YVFEKALDKDVTLWTAMISGLAFNGHGTEALELFWKMQTEAIAPNGVTLLAVLSACSHAG 474
Query: 368 LVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
L+D+G I +MKQ+Y++EPG EH+GCMVD
Sbjct: 475 LLDEGCRILDAMKQKYSIEPGIEHFGCMVD 504
Score = 55.5 bits (132), Expect = 7e-06
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +2
Query: 17 DRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFL--GSALIDMYSKCGSIERSLV 190
DR TAVAL+ + GR +HG + + A D +L +AL+DMY+KCG + +
Sbjct: 224 DRYTAVALLTCCGRLKTVLLGRSVHGVIVRRMDAGDNWLILVNALLDMYAKCGRMNAAER 283
Query: 191 IFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLM 316
+F S+KD W M++G A G A F + L+
Sbjct: 284 VFGEASEKDGISWNTMVSGFANAGMLDLASRFFSEAPSRDLI 325
>ref|NP_001147435.1| methyltransferase small domain [Zea mays]
gi|195611352|gb|ACG27506.1| methyltransferase small
domain [Zea mays]
Length = 601
Score = 190 bits (483), Expect = 1e-46
Identities = 88/150 (58%), Positives = 116/150 (77%)
Frame = +2
Query: 8 VRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIERSL 187
V D+VTAV L+ AA G L+H + +HGWV K +G DAFL SAL+DMY KCG+++ +
Sbjct: 352 VNLDKVTAVTLISAAAGKGSLNHAKSVHGWVVKEFGHQDAFLASALVDMYCKCGNVKIAY 411
Query: 188 VIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSHAG 367
+F KDVTLWTAMI+GLAF+G+G +A+ELF KMQ E + PN VTL+A L+ACSH+G
Sbjct: 412 YVFEKALDKDVTLWTAMISGLAFNGHGTEALELFWKMQTEVVAPNGVTLLAVLSACSHSG 471
Query: 368 LVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
L+D+G +IF +MKQRY++EPG EH+GCMVD
Sbjct: 472 LLDEGCKIFDAMKQRYSIEPGIEHFGCMVD 501
>ref|XP_006408155.1| hypothetical protein EUTSA_v10020244mg [Eutrema salsugineum]
gi|557109301|gb|ESQ49608.1| hypothetical protein
EUTSA_v10020244mg [Eutrema salsugineum]
Length = 656
Score = 188 bits (477), Expect = 7e-46
Identities = 91/152 (59%), Positives = 114/152 (75%)
Frame = +2
Query: 2 ESVRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIER 181
E V PDRVT V+L+ AA GEL GR +HG + + +DAFLGSALIDMY KCG+IER
Sbjct: 357 EKVIPDRVTVVSLISGAANNGELDQGRWVHGLMIRLRLKIDAFLGSALIDMYCKCGAIER 416
Query: 182 SLVIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSH 361
+ V+F V +KDVTLWT MITG AFHG G +A++LF +MQEEG+ PNKVTL+A LTACSH
Sbjct: 417 AFVVFKTVPEKDVTLWTTMITGSAFHGNGKQALQLFEEMQEEGVTPNKVTLLAVLTACSH 476
Query: 362 AGLVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
+GLV++G IF MK ++ +P EHYG +VD
Sbjct: 477 SGLVEEGLHIFNHMKLKFGFDPETEHYGSLVD 508
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 35/162 (21%)
Frame = +2
Query: 2 ESVRPDRVTAVALVCTAAETGELSHGRCIHGWVH--KGYGALDAFLGSALIDMYSKC--- 166
+ + PD + L+ + ++ G+ +HGW+ K + + L +AL+DMY KC
Sbjct: 221 DGIEPDEYAVLGLLVCCGQLSDIRLGKGVHGWIERRKPGSSSNLILSNALLDMYFKCKEP 280
Query: 167 ----------------------------GSIERSLVIFNHVSKKDVTLWTAMITGLAFHG 262
G +E + +F + K+D+ W +++ G + G
Sbjct: 281 GLVKRAFDMMKKKDMRSWNTMVGGFVRLGDMEAAQDVFYQMPKRDLVSWNSLLFGYSKKG 340
Query: 263 YGAKAM-ELFVKMQ-EEGLMPNKVTLVAALTACSHAGLVDQG 382
+A+ ELF +M E ++P++VT+V+ ++ ++ G +DQG
Sbjct: 341 CDQRAVRELFSEMLIVEKVIPDRVTVVSLISGAANNGELDQG 382
Score = 57.4 bits (137), Expect = 2e-06
Identities = 37/137 (27%), Positives = 73/137 (53%)
Frame = +2
Query: 2 ESVRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIER 181
+SV PDR T + L+ + E+ C H V G +L +L ++L+ +Y + GS+
Sbjct: 122 QSVSPDRQTFLHLMKASILLSEVKQIHC-HIIVF-GCLSLGNYLWNSLVMVYMELGSLGF 179
Query: 182 SLVIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSH 361
+ +F+ +++ DV+ + MI G A G+ +A+EL+ KM +G+ P++ ++ L C
Sbjct: 180 AEKVFDTMTEPDVSSFNTMIAGYARKGFSLEALELYYKMVGDGIEPDEYAVLGLLVCCGQ 239
Query: 362 AGLVDQGTEIFKSMKQR 412
+ G + +++R
Sbjct: 240 LSDIRLGKGVHGWIERR 256
>tpg|DAA51276.1| TPA: methyltransferase small domain protein [Zea mays]
Length = 601
Score = 187 bits (476), Expect = 1e-45
Identities = 86/150 (57%), Positives = 114/150 (76%)
Frame = +2
Query: 8 VRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIERSL 187
V D+VTAV L+ A G L+H + +HGWV K + DAFL SAL+DMY KCG+++ +
Sbjct: 352 VNLDKVTAVTLISAATGKGSLNHAKSVHGWVVKEFDHQDAFLASALVDMYCKCGNVKTAY 411
Query: 188 VIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSHAG 367
+F KDVTLWTAMI+GLAF+G+G +A+ELF KMQ E + PN VTL+A L+ACSH+G
Sbjct: 412 YVFEKALDKDVTLWTAMISGLAFNGHGTEALELFCKMQTEVVAPNGVTLLAVLSACSHSG 471
Query: 368 LVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
L+D+G +IF +MKQRY++EPG EH+GCMVD
Sbjct: 472 LLDEGCKIFDAMKQRYSIEPGIEHFGCMVD 501
>ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical
protein [Arabidopsis thaliana]
gi|332640610|gb|AEE74131.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 661
Score = 187 bits (475), Expect = 1e-45
Identities = 89/152 (58%), Positives = 114/152 (75%)
Frame = +2
Query: 2 ESVRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIER 181
E V+PDRVT V+L+ AA GELSHGR +HG V + DAFL SALIDMY KCG IER
Sbjct: 362 EKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIER 421
Query: 182 SLVIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSH 361
+ ++F ++KDV LWT+MITGLAFHG G +A++LF +MQEEG+ PN VTL+A LTACSH
Sbjct: 422 AFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSH 481
Query: 362 AGLVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
+GLV++G +F MK ++ +P EHYG +VD
Sbjct: 482 SGLVEEGLHVFNHMKDKFGFDPETEHYGSLVD 513
>ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330307|gb|EFH60726.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 657
Score = 186 bits (473), Expect = 2e-45
Identities = 88/152 (57%), Positives = 114/152 (75%)
Frame = +2
Query: 2 ESVRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIER 181
E V+PDRVT V+L+ AA GELSHGR +HG + + DAFL SALIDMY KCG IER
Sbjct: 361 EKVKPDRVTMVSLISGAANNGELSHGRWVHGLMIRLQLEGDAFLSSALIDMYCKCGLIER 420
Query: 182 SLVIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSH 361
+ ++F ++KDV LWT+MITG AFHGYG +A++LF +MQEE + PNKVTL+A LTACSH
Sbjct: 421 AFMVFKTATEKDVPLWTSMITGFAFHGYGQQALQLFKRMQEEDVTPNKVTLLAVLTACSH 480
Query: 362 AGLVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
+GLV++G +F MK+++ P EHYG +VD
Sbjct: 481 SGLVEEGLHVFYHMKEKFGFHPETEHYGSLVD 512
Score = 64.3 bits (155), Expect = 2e-08
Identities = 38/135 (28%), Positives = 71/135 (52%)
Frame = +2
Query: 8 VRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIERSL 187
V PDR T + L+ ++ E+ C + G +L +L ++L+ Y + GS+ +
Sbjct: 128 VSPDRQTFLHLMKASSFLSEVKQIHC--HIIVSGCLSLGNYLWNSLVKFYMELGSLGFAE 185
Query: 188 VIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSHAG 367
+F + + DV+ + MI G A G+G +A+EL+ KM +G+ P++ TL+ L C H
Sbjct: 186 KVFAIMPQPDVSSFNVMIVGYAKQGFGLEALELYYKMVSDGIEPDEYTLLGLLVCCGHLS 245
Query: 368 LVDQGTEIFKSMKQR 412
+ G + +++R
Sbjct: 246 DIRLGKGVHGWIERR 260
>ref|XP_006471681.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Citrus sinensis]
Length = 655
Score = 185 bits (470), Expect = 5e-45
Identities = 89/152 (58%), Positives = 110/152 (72%)
Frame = +2
Query: 2 ESVRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIER 181
+ V+PD +T + LV AAE G + GR IHG V + +D FLGS LIDMY KCGSIER
Sbjct: 356 DHVKPDNITLINLVSAAAEVGAIDQGRWIHGVVVRMGTMMDEFLGSVLIDMYCKCGSIER 415
Query: 182 SLVIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSH 361
+L +F V +KDVT+WT MITGLAFHG+G KA+ELF +M E + PN VT VA LT CSH
Sbjct: 416 ALTVFREVREKDVTVWTTMITGLAFHGHGRKALELFSEMHGE-VTPNGVTFVAVLTVCSH 474
Query: 362 AGLVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
G+VD+G E+F SMK+ Y +EP EHYGC+VD
Sbjct: 475 CGIVDEGLELFNSMKENYGIEPRIEHYGCLVD 506
Score = 76.3 bits (186), Expect = 4e-12
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 33/158 (20%)
Frame = +2
Query: 8 VRPDRVTAVALVCTAAETGELSHGRCIHGWVH--KGYGALDAFLGSALIDMYSKC----- 166
+ PD TA+ L+ + ++ G+ +H W+ K + + LG+AL+DMY KC
Sbjct: 224 LEPDEFTALGLLVCCGQLADVQLGKSVHAWMERRKKVSSSNMILGNALLDMYVKCKELQL 283
Query: 167 --------------------------GSIERSLVIFNHVSKKDVTLWTAMITGLAFHGYG 268
G +E + +FNH+ +D+ W ++I G A +G
Sbjct: 284 ARRTFDALEVKDAVSWNTIMSGLAKVGQLEYACTLFNHMPNRDIISWNSLIAGYAQNGDY 343
Query: 269 AKAMELFVKMQEEGLMPNKVTLVAALTACSHAGLVDQG 382
ELF+ M + + P+ +TL+ ++A + G +DQG
Sbjct: 344 VMMRELFINMILDHVKPDNITLINLVSAAAEVGAIDQG 381
>ref|XP_006432926.1| hypothetical protein CICLE_v10000494mg [Citrus clementina]
gi|557535048|gb|ESR46166.1| hypothetical protein
CICLE_v10000494mg [Citrus clementina]
Length = 681
Score = 185 bits (470), Expect = 5e-45
Identities = 89/152 (58%), Positives = 110/152 (72%)
Frame = +2
Query: 2 ESVRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIER 181
+ V+PD +T + LV AAE G + GR IHG V + +D FLGS LIDMY KCGSIER
Sbjct: 356 DHVKPDNITLINLVSAAAEVGAIDQGRWIHGVVVRMGTMMDEFLGSVLIDMYCKCGSIER 415
Query: 182 SLVIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSH 361
+L +F V +KDVT+WT MITGLAFHG+G KA+ELF +M E + PN VT VA LT CSH
Sbjct: 416 ALTVFREVREKDVTVWTTMITGLAFHGHGRKALELFSEMHGE-VTPNGVTFVAVLTVCSH 474
Query: 362 AGLVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
G+VD+G E+F SMK+ Y +EP EHYGC+VD
Sbjct: 475 CGIVDEGLELFNSMKENYGIEPRIEHYGCLVD 506
Score = 76.3 bits (186), Expect = 4e-12
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 33/158 (20%)
Frame = +2
Query: 8 VRPDRVTAVALVCTAAETGELSHGRCIHGWVH--KGYGALDAFLGSALIDMYSKC----- 166
+ PD TA+ L+ + ++ G+ +H W+ K + + LG+AL+DMY KC
Sbjct: 224 LEPDEFTALGLLVCCGQLADVQLGKSVHAWMERRKKVSSSNMILGNALLDMYVKCKELQL 283
Query: 167 --------------------------GSIERSLVIFNHVSKKDVTLWTAMITGLAFHGYG 268
G +E + +FNH+ +D+ W ++I G A +G
Sbjct: 284 ARRTFDALEVKDAVSWNTIMSGLAKVGQLEYACTLFNHMPNRDIISWNSLIAGYAQNGDY 343
Query: 269 AKAMELFVKMQEEGLMPNKVTLVAALTACSHAGLVDQG 382
ELF+ M + + P+ +TL+ ++A + G +DQG
Sbjct: 344 VMMRELFINMILDHVKPDNITLINLVSAAAEVGAIDQG 381
>ref|XP_004981816.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like isoform X1 [Setaria italica]
gi|514814078|ref|XP_004981817.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like isoform X2 [Setaria italica]
Length = 603
Score = 184 bits (467), Expect = 1e-44
Identities = 86/150 (57%), Positives = 114/150 (76%)
Frame = +2
Query: 8 VRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIERSL 187
V PD+VTAV L+ AA +G +G+CIH WV K +G D FL SAL+DMY K G+++ +
Sbjct: 355 VNPDKVTAVTLISAAASSGS-RYGKCIHSWVVKEFGHQDVFLASALVDMYCKFGNVKVAY 413
Query: 188 VIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSHAG 367
+F +DVTLWTAMI+GLAF+G+G +A++LF KMQ E + PN VTL+A L+ACSHAG
Sbjct: 414 SVFEKALDRDVTLWTAMISGLAFNGHGTEALDLFQKMQAEVVTPNSVTLLAVLSACSHAG 473
Query: 368 LVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
L+D+G IF +MKQRY++EPG EH+GCMVD
Sbjct: 474 LLDEGCRIFDAMKQRYSIEPGIEHFGCMVD 503
>ref|XP_004304748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 670
Score = 181 bits (460), Expect = 7e-44
Identities = 84/152 (55%), Positives = 116/152 (76%)
Frame = +2
Query: 2 ESVRPDRVTAVALVCTAAETGELSHGRCIHGWVHKGYGALDAFLGSALIDMYSKCGSIER 181
E+VRPD +T V LV AAE G L G+ +HG + + +DAFLGSALIDMY K GS+ER
Sbjct: 374 ENVRPDNITLVNLVSAAAEIGALDKGKWMHGLILRMQMKIDAFLGSALIDMYCKAGSLER 433
Query: 182 SLVIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTACSH 361
+ ++F +++KDVT+WT +ITG AFHG+G K ++LF +MQ L+PN VT+VA LT CSH
Sbjct: 434 AFLVFRELTEKDVTVWTTLITGFAFHGHGRKGLDLFSEMQ-RFLLPNGVTIVAVLTGCSH 492
Query: 362 AGLVDQGTEIFKSMKQRYNVEPGKEHYGCMVD 457
+GLV++G IF SMK++++++PG EHYGC+VD
Sbjct: 493 SGLVEEGLSIFNSMKKKFDIDPGIEHYGCLVD 524
Score = 62.4 bits (150), Expect = 6e-08
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Frame = +2
Query: 2 ESVRPDRVTAVALVCTAAETGELSHGRC---IHGWVHKGYGALDAFLGSALIDMYSKCGS 172
+ + PD+ T + L+ + ++ C + G + +GY L ++LI MY + G
Sbjct: 143 DDIYPDKNTLLYLLRASKNLSDVKQIHCHAIVTGLLSQGY------LQNSLIKMYMEKGQ 196
Query: 173 IERSLVIFNHVSKKDVTLWTAMITGLAFHGYGAKAMELFVKMQEEGLMPNKVTLVAALTA 352
+E S ++F+H+ D + MI G A Y ++A++LF KM + GL P+ T++ L +
Sbjct: 197 MELSHLVFHHLPTPDRVSFNIMIVGYARKEYFSEALQLFYKMMDLGLKPDDFTILGLLMS 256
Query: 353 CSHAGLVDQGTEIFKSMKQRYNV 421
C G G + +++R +
Sbjct: 257 CGGIGDARLGMSVHAWIERRETI 279