BLASTX nr result
ID: Zingiber23_contig00051342
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00051342
(280 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006604760.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_006604759.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago t... 66 4e-09
gb|ESW35233.1| hypothetical protein PHAVU_001G217700g [Phaseolus... 65 7e-09
ref|XP_004494443.1| PREDICTED: pentatricopeptide repeat-containi... 65 9e-09
gb|EXB55980.1| hypothetical protein L484_018766 [Morus notabilis] 65 1e-08
gb|EPS64899.1| hypothetical protein M569_09880, partial [Genlise... 65 1e-08
ref|XP_004973335.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_004240647.1| PREDICTED: pentatricopeptide repeat-containi... 62 8e-08
emb|CBI36977.3| unnamed protein product [Vitis vinifera] 62 8e-08
ref|XP_006355831.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_003574443.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_002443755.1| hypothetical protein SORBIDRAFT_07g001380 [S... 61 2e-07
gb|ESW09498.1| hypothetical protein PHAVU_009G132500g [Phaseolus... 60 2e-07
gb|EMT33313.1| hypothetical protein F775_07750 [Aegilops tauschii] 60 3e-07
ref|XP_006659353.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
ref|XP_006394465.1| hypothetical protein EUTSA_v10005291mg [Eutr... 59 7e-07
gb|EEC68712.1| hypothetical protein OsI_37194 [Oryza sativa Indi... 57 2e-06
gb|AFW74323.1| hypothetical protein ZEAMMB73_642674 [Zea mays] 57 3e-06
gb|AFW74322.1| hypothetical protein ZEAMMB73_642674 [Zea mays] 57 3e-06
>ref|XP_006604760.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X2 [Glycine max]
Length = 299
Score = 66.6 bits (161), Expect = 3e-09
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPSSN---LIPQLHSMAI 110
WN +LS F R ++ FL+M RAGV P+ T++T++ A+ S+ LIPQLH+ A+
Sbjct: 90 WNIMLSGFHRITNSDGLYRCFLQMGRAGVPPDDYTVSTLLRAVISTELDVLIPQLHARAL 149
Query: 109 RAGLTPLNSILGTALVGGYASLEDPVSMRRAFGDI 5
L L+ +G++L+ YASL D + ++AF DI
Sbjct: 150 HLALN-LSVFVGSSLIRAYASLRDEEAFKQAFDDI 183
>ref|XP_006604759.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Glycine max]
Length = 531
Score = 66.6 bits (161), Expect = 3e-09
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPSSN---LIPQLHSMAI 110
WN +LS F R ++ FL+M RAGV P+ T++T++ A+ S+ LIPQLH+ A+
Sbjct: 90 WNIMLSGFHRITNSDGLYRCFLQMGRAGVPPDDYTVSTLLRAVISTELDVLIPQLHARAL 149
Query: 109 RAGLTPLNSILGTALVGGYASLEDPVSMRRAFGDI 5
L L+ +G++L+ YASL D + ++AF DI
Sbjct: 150 HLALN-LSVFVGSSLIRAYASLRDEEAFKQAFDDI 183
>ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501015|gb|AES82218.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 607
Score = 66.2 bits (160), Expect = 4e-09
Identities = 37/95 (38%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPSSN---LIPQLHSMAI 110
WN +LS F+RT ++ FL+M RAGV PN T++T++ A+ S+ L+ Q+H++A
Sbjct: 74 WNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLVRQVHALAF 133
Query: 109 RAGLTPLNSILGTALVGGYASLEDPVSMRRAFGDI 5
G LN +G++L+ YA L++ ++ RAF DI
Sbjct: 134 HLG-HYLNVFVGSSLIRAYAGLKEEEALGRAFNDI 167
>gb|ESW35233.1| hypothetical protein PHAVU_001G217700g [Phaseolus vulgaris]
Length = 561
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/95 (34%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPSSN---LIPQLHSMAI 110
WN +LS F R ++HFL+M R+GV+P+ T++T++ + S+ L+PQ+H++A+
Sbjct: 122 WNIMLSGFSRITDSEGLYRHFLQMGRSGVAPDDYTISTLLRTVISTKLDVLVPQVHALAL 181
Query: 109 RAGLTPLNSILGTALVGGYASLEDPVSMRRAFGDI 5
L L+ +G++L+ YA+L + + +R F DI
Sbjct: 182 HLALN-LSVFVGSSLIRAYANLREEEAFKRVFDDI 215
>ref|XP_004494443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cicer arietinum]
Length = 527
Score = 65.1 bits (157), Expect = 9e-09
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPSSN---LIPQLHSMAI 110
WN +LS F +T +Q FL+M RAGV PN T++ ++ A+ + L+ Q+H+MA
Sbjct: 88 WNIMLSGFMKTRNTEGLYQCFLQMGRAGVVPNDYTISKLLRAVICTELEVLVYQVHAMAS 147
Query: 109 RAGLTPLNSILGTALVGGYASLEDPVSMRRAFGDI 5
GL LN +G++L+ YA+L + ++ RAF DI
Sbjct: 148 HLGLN-LNVFVGSSLIRAYAALREEEALSRAFDDI 181
>gb|EXB55980.1| hypothetical protein L484_018766 [Morus notabilis]
Length = 522
Score = 64.7 bits (156), Expect = 1e-08
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPSSN---LIPQLHSMAI 110
WNT+LS R++ P + L M+R G+SPN T++T++ A+ + L+ QLH+ I
Sbjct: 77 WNTMLSGLRKSKDPHGVYGCLLGMRRTGLSPNEYTISTVLKAVFGTEFNVLVFQLHAFVI 136
Query: 109 RAGLTPLNSIL--GTALVGGYASLEDPVSMRRAFGDI 5
R LNS L G+AL+ GYA + DPV +RR F ++
Sbjct: 137 RVA---LNSCLFVGSALMRGYADVGDPVVLRRVFDEL 170
>gb|EPS64899.1| hypothetical protein M569_09880, partial [Genlisea aurea]
Length = 455
Score = 64.7 bits (156), Expect = 1e-08
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPSSN---LIPQLHSMAI 110
WNT+LS FR P + + FL M R G +P+ T + ++ SS LIPQLH++ I
Sbjct: 60 WNTMLSGFRDIRSPDKSHRCFLTMMRYGPTPDELTFSILIGTFLSSQHKILIPQLHAIVI 119
Query: 109 RAGLTPLNSILGTALVGGYASLEDPVSMRRAFGDIP 2
R G++ LN LG+AL+ Y +L S R F +IP
Sbjct: 120 RLGIS-LNIYLGSALMRAYVALGHSESYIRVFDEIP 154
>ref|XP_004973335.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like isoform X1 [Setaria italica]
gi|514795589|ref|XP_004973336.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g19720-like isoform X2 [Setaria italica]
Length = 862
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPSSNLIPQ---LHSMAI 110
W +++SAF + R A Q F+RM+ AGV PNG T+A+ ++A S L+ Q LH AI
Sbjct: 293 WTSLVSAFVHSDRGDEALQCFIRMRLAGVEPNGMTIASAISACASLRLLSQGMELHCHAI 352
Query: 109 RAGLTPLNSIL-GTALVGGYASLEDPVSMRRAFGDIP 2
+ G +N++L G +LV YA + V+ R F +IP
Sbjct: 353 KVG--SVNNVLSGNSLVDMYAKCGEIVAAMRIFNEIP 387
>ref|XP_004240647.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Solanum lycopersicum]
Length = 630
Score = 62.0 bits (149), Expect = 8e-08
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAG-VSPNGATLATMVAA---IPSSNLIPQLHSMA 113
WNT+LS +R P ++ FL M R G + PN T A +++ + +LIPQLH +
Sbjct: 84 WNTMLSGYRNANNPGKVYRCFLDMNRCGEMRPNELTFAVSISSFLHLHYKHLIPQLHGLV 143
Query: 112 IRAGLTPLNSILGTALVGGYASLEDPVSMRRAFGDI 5
+ +G++ LN +G+AL+ GY L+D + R F +I
Sbjct: 144 LCSGIS-LNVFVGSALMRGYVDLDDYRGLVRVFDEI 178
>emb|CBI36977.3| unnamed protein product [Vitis vinifera]
Length = 372
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPS---SNLIPQLHSMAI 110
WNT LS ++ P + FL+M+R G+ PN TL+ M++AI + L PQ+H++ +
Sbjct: 86 WNTALSGLKKIKNPEGVYLCFLKMRRVGLKPNEFTLSIMISAILDTVFNVLTPQIHAVVV 145
Query: 109 RAGLTPLNSILGTALVGGYASLEDPVSMRRAFGDI 5
G + +G+AL+ GYA + D V++ R F +I
Sbjct: 146 SLGFNS-SVFVGSALMRGYAHVGDRVALGRVFDEI 179
>ref|XP_006355831.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Solanum tuberosum]
Length = 529
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAG-VSPNGATLATMVAA---IPSSNLIPQLHSMA 113
WNT+LS +R P ++ FL M R G + PN T A +++ + +LIPQLH +
Sbjct: 84 WNTMLSGYRNANNPEKVYRCFLDMNRCGDMRPNELTFAVSISSFLHLYYKHLIPQLHGIV 143
Query: 112 IRAGLTPLNSILGTALVGGYASLEDPVSMRRAFGDI 5
+ G++ LN +G+AL+ GY L+D + R F +I
Sbjct: 144 LCLGIS-LNVFVGSALMRGYVDLDDYRGLARVFDEI 178
>ref|XP_003574443.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Brachypodium distachyon]
Length = 859
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPSSNLIPQ---LHSMAI 110
W +++S F + R + A Q F+RM+ AGV PNG T+A ++A S L+ Q LH AI
Sbjct: 290 WTSLVSGFVHSDRGVEALQCFIRMRLAGVEPNGMTIACAISACASLKLLNQGSMLHCHAI 349
Query: 109 RAGLTPLNSILGTALVGGYASLEDPVSMRRAFGDIP 2
+ G + N + G +LV YA + V+ R F IP
Sbjct: 350 KVG-SVKNVLSGNSLVDMYAKCGETVAASRIFNQIP 384
>ref|XP_002443755.1| hypothetical protein SORBIDRAFT_07g001380 [Sorghum bicolor]
gi|241940105|gb|EES13250.1| hypothetical protein
SORBIDRAFT_07g001380 [Sorghum bicolor]
Length = 871
Score = 60.8 bits (146), Expect = 2e-07
Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPSSNLIPQ---LHSMAI 110
W +++S F + R A + F+RM+ AGV PNG T+A+ ++A S L+ Q LH AI
Sbjct: 305 WTSLVSGFVHSDRSGEALRCFMRMRLAGVEPNGMTIASAISACASLRLLSQGMELHCHAI 364
Query: 109 RAGLTPLNSIL-GTALVGGYASLEDPVSMRRAFGDIP 2
+ G +N++L G +LV YA + V+ +R F +IP
Sbjct: 365 KVG--SVNNVLSGNSLVDMYAKCGEIVAAKRIFNEIP 399
>gb|ESW09498.1| hypothetical protein PHAVU_009G132500g [Phaseolus vulgaris]
Length = 693
Score = 60.5 bits (145), Expect = 2e-07
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPSSNLIP---QLHSMAI 110
WN +++A+ R+G P AF FL M R+G P+ T A+++A+ +++ +P Q+H +
Sbjct: 127 WNALITAYSRSGFPNQAFSLFLLMTRSGFWPSEVTFASVLASCAAASQLPLSKQVHGLVT 186
Query: 109 RAGLTPLNSILGTALVGGYASLEDPVSMRRAFGDIP 2
+ G N ILG++LV YA V RR F +IP
Sbjct: 187 KFGFCG-NVILGSSLVDVYAKCGVMVDARRMFHEIP 221
>gb|EMT33313.1| hypothetical protein F775_07750 [Aegilops tauschii]
Length = 1114
Score = 60.1 bits (144), Expect = 3e-07
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPSSNLI---PQLHSMAI 110
W +++S F + R A Q F+RM+ AGV PNG T+A ++A S L+ QLH AI
Sbjct: 256 WTSLVSGFVHSDRGDEALQCFIRMRVAGVEPNGMTIACAISACASLKLLRQGSQLHCHAI 315
Query: 109 RAGLTPLNSILGTALVGGYASLEDPVSMRRAFGDIP 2
+ G T N + G +LV YA + V+ R F +IP
Sbjct: 316 KIG-TVNNVLSGNSLVDMYAKCGEIVAAYRIFNEIP 350
>ref|XP_006659353.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Oryza brachyantha]
Length = 866
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPSSNLIPQ---LHSMAI 110
W +++S F R A + F+RM+ AGV PNG ++A+ ++A S L+ Q LHS AI
Sbjct: 297 WTSLVSGFVHMDRGDEALRCFIRMRLAGVEPNGMSIASAISACASLKLLNQGRELHSHAI 356
Query: 109 RAGLTPLNSIL-GTALVGGYASLEDPVSMRRAFGDIP 2
+ G +N++L G +LV YA + V+ R F DIP
Sbjct: 357 KVG--SVNNVLSGNSLVDMYAKCGEIVAAWRIFNDIP 391
>ref|XP_006394465.1| hypothetical protein EUTSA_v10005291mg [Eutrema salsugineum]
gi|557091104|gb|ESQ31751.1| hypothetical protein
EUTSA_v10005291mg [Eutrema salsugineum]
Length = 514
Score = 58.9 bits (141), Expect = 7e-07
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPSSNL---IPQLHSMAI 110
WNT+L ++T P F+ M+R+G++P+ TL ++ A+ S + Q+H++AI
Sbjct: 90 WNTMLMGLKKTRDPESVVSFFIAMRRSGLNPDELTLPAIMDAVLGSTFKVSVLQIHTLAI 149
Query: 109 RAGLTPLNSILGTALVGGYASLEDPVSMRRAFGDI 5
R GL+ L+ G+AL+ Y S D + R F DI
Sbjct: 150 RLGLS-LSPYTGSALLRAYTSFRDFRGLERVFEDI 183
>gb|EEC68712.1| hypothetical protein OsI_37194 [Oryza sativa Indica Group]
Length = 787
Score = 57.4 bits (137), Expect = 2e-06
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAA-----IPSSNLIP---QL 125
W ++SA R G P L F+ F+ M R+G PN LATM+ A SSN +P L
Sbjct: 97 WTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFALATMLTACHSMLAHSSNKLPIALSL 156
Query: 124 HSMAIRAGLTPLNSILGTALVGGYASLEDPVSMRRAFGDI 5
H +A+RAGL N +G++L+ YA + +RAF I
Sbjct: 157 HGVAVRAGLDS-NPFVGSSLLLMYAKHGRIAAAQRAFAHI 195
>gb|AFW74323.1| hypothetical protein ZEAMMB73_642674 [Zea mays]
Length = 876
Score = 56.6 bits (135), Expect = 3e-06
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPSSNLIPQ---LHSMAI 110
W +++S F R A F RM+ AGV PNG T+A+ ++A S L+ Q LH AI
Sbjct: 308 WTSLVSGFVHGDRGGEALWCFARMRLAGVEPNGMTIASAISACASLRLLSQGMELHCHAI 367
Query: 109 RAGLTPLNSIL-GTALVGGYASLEDPVSMRRAFGDIP 2
+ G +N++L G +LV YA + ++ +R F +IP
Sbjct: 368 KVG--SVNNVLSGNSLVDMYAKCGEIIAAKRVFDEIP 402
>gb|AFW74322.1| hypothetical protein ZEAMMB73_642674 [Zea mays]
Length = 1028
Score = 56.6 bits (135), Expect = 3e-06
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Frame = -1
Query: 280 WNTILSAFRRTGRPLLAFQHFLRMQRAGVSPNGATLATMVAAIPSSNLIPQ---LHSMAI 110
W +++S F R A F RM+ AGV PNG T+A+ ++A S L+ Q LH AI
Sbjct: 308 WTSLVSGFVHGDRGGEALWCFARMRLAGVEPNGMTIASAISACASLRLLSQGMELHCHAI 367
Query: 109 RAGLTPLNSIL-GTALVGGYASLEDPVSMRRAFGDIP 2
+ G +N++L G +LV YA + ++ +R F +IP
Sbjct: 368 KVG--SVNNVLSGNSLVDMYAKCGEIIAAKRVFDEIP 402