BLASTX nr result
ID: Zingiber23_contig00051233
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00051233
(242 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR17838.1| unknown [Picea sitchensis] 72 1e-10
ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
gb|EMJ15466.1| hypothetical protein PRUPE_ppa025121mg [Prunus pe... 70 3e-10
gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis] 69 8e-10
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [S... 67 3e-09
ref|XP_004975518.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
ref|XP_004969297.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
ref|XP_004504288.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
gb|EMJ17577.1| hypothetical protein PRUPE_ppa020947mg [Prunus pe... 66 4e-09
gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays] 66 5e-09
ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea m... 65 7e-09
ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, part... 65 9e-09
ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat... 65 9e-09
ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 65 9e-09
ref|XP_006340958.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_004247938.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
>gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/76 (39%), Positives = 54/76 (71%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
I+GY++N P +L LFS+ N + + ++L+ V+P CA+L+AL+QG++IH + +RSG+
Sbjct: 193 IAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGI 252
Query: 183 RLDGFLCNALIDLYSK 230
D + N L+++Y+K
Sbjct: 253 ESDVLVVNGLVNMYAK 268
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/76 (38%), Positives = 50/76 (65%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
ISGY+++ P +L LF + A + D +++ VLPACA+ +AL+QG++IH + +RSG
Sbjct: 395 ISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGF 454
Query: 183 RLDGFLCNALIDLYSK 230
+ + L+D+Y+K
Sbjct: 455 ESNVVVGTGLVDIYAK 470
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/76 (35%), Positives = 48/76 (63%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
I GY+ N+ +L F+ + + +++ VLPACA+L AL+QG++IH + +RSG
Sbjct: 294 IGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGF 353
Query: 183 RLDGFLCNALIDLYSK 230
+ + NAL+++Y+K
Sbjct: 354 ESNDVVGNALVNMYAK 369
>ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 870
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
I GY++N P +L LFSD + K + D +L VLPACA+L AL +G+EIH ++LR G
Sbjct: 471 IGGYSKNCLPNEALELFSD-MQRKFKPDSMTLASVLPACASLAALDRGQEIHGYLLRHGY 529
Query: 183 RLDGFLCNALIDLYSK 230
LD ++ NAL+D+Y K
Sbjct: 530 FLDQYVANALVDMYVK 545
>gb|EMJ15466.1| hypothetical protein PRUPE_ppa025121mg [Prunus persica]
Length = 796
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
I GY++N P +L LFS+ + K + D ++ VLPACA+L AL +G+EIH H+LR+G
Sbjct: 397 IGGYSKNCLPNEALKLFSE-MQQKSKPDGMTIASVLPACASLAALNRGQEIHGHILRNGY 455
Query: 183 RLDGFLCNALIDLYSK 230
D ++ NAL+D+Y K
Sbjct: 456 FSDRYVANALVDMYVK 471
>gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis]
Length = 877
Score = 68.6 bits (166), Expect = 8e-10
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
I GY++N P +L LF++ + K + D + +LPACA+L AL +GREIH H+LR+G
Sbjct: 479 IGGYSKNRLPNEALKLFAE-MQGKSKADSITAACILPACASLAALAKGREIHGHVLRNGY 537
Query: 183 RLDGFLCNALIDLYSKSEFL 242
D + NAL+D+Y K L
Sbjct: 538 FQDRHVANALVDMYVKCGLL 557
>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/76 (43%), Positives = 51/76 (67%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
I GY++N+ P +L LF + N + ++ +LPACA+L AL++G+EIH H+LR+G
Sbjct: 425 IGGYSKNSLPNEALNLFVEMQYNSKP-NSITMACILPACASLAALERGQEIHGHILRNGF 483
Query: 183 RLDGFLCNALIDLYSK 230
LD + NAL+D+Y K
Sbjct: 484 SLDRHVANALVDMYLK 499
>ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein
SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/82 (39%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTL------ANKDQWDEASLLGVLPACANLMALKQGREIHAH 164
++ + + ++P ++L LFS+ A ++ D S++ +LPACA+L AL Q +EIH++
Sbjct: 225 VAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSY 284
Query: 165 MLRSGLRLDGFLCNALIDLYSK 230
+R+G D F+CNALID Y+K
Sbjct: 285 AIRNGTFADAFVCNALIDTYAK 306
>ref|XP_004975518.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like isoform X1 [Setaria italica]
gi|514801211|ref|XP_004975519.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g16860-like isoform X2 [Setaria italica]
gi|514801214|ref|XP_004975520.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g16860-like isoform X3 [Setaria italica]
Length = 886
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTL------ANKDQWDEASLLGVLPACANLMALKQGREIHAH 164
++ + ++N P ++L LFS A ++ D S++ VLPACA+L AL Q +EIH +
Sbjct: 225 VAAHVKSNHPWTALDLFSKMALIVHEKATNERSDIISIVNVLPACASLKALPQTKEIHGY 284
Query: 165 MLRSGLRLDGFLCNALIDLYSK 230
+R+G D F+CNALID Y+K
Sbjct: 285 AIRNGTFPDAFVCNALIDTYAK 306
>ref|XP_004969297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Setaria italica]
Length = 886
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTL------ANKDQWDEASLLGVLPACANLMALKQGREIHAH 164
++ + ++N P ++L LFS A ++ D S++ VLPACA+L AL Q +EIH +
Sbjct: 225 VAAHVKSNHPWTALDLFSKMALIVHEKATNERSDIISIVNVLPACASLKALPQTKEIHGY 284
Query: 165 MLRSGLRLDGFLCNALIDLYSK 230
+R+G D F+CNALID Y+K
Sbjct: 285 AIRNGTFPDAFVCNALIDTYAK 306
>ref|XP_004504288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like isoform X1 [Cicer arietinum]
gi|502140652|ref|XP_004504289.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 879
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/80 (45%), Positives = 52/80 (65%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
I GY++N+ P +L LFSD + + + D+ ++ VLPACA L AL +GREIH H+LR G
Sbjct: 480 IGGYSKNSLPNGALELFSD-MVEQLKPDDITMACVLPACAGLAALDKGREIHGHILRRGY 538
Query: 183 RLDGFLCNALIDLYSKSEFL 242
D + AL+D+Y+K L
Sbjct: 539 FSDLHVACALVDMYAKCGLL 558
>gb|EMJ17577.1| hypothetical protein PRUPE_ppa020947mg [Prunus persica]
Length = 710
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/81 (41%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
ISGY +NN+P +L +F + + D +LLG+L ACA L+ALK G+EIHA+++R +
Sbjct: 208 ISGYVKNNNPRKALEVFEEMGKAGLKADGTTLLGILSACAELLALKLGKEIHAYVVRKSV 267
Query: 183 RL-DGFLCNALIDLYSKSEFL 242
+ + FL N+LI++Y + L
Sbjct: 268 EIHNEFLTNSLIEMYCNCKSL 288
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/76 (36%), Positives = 47/76 (61%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
I GYA N L +L+L+ + L+ + D + VL AC +L+ ++ GR +H+ ++ SGL
Sbjct: 107 IRGYACNECSLKALVLYREMLSFGQKADNFTYPFVLKACGDLLLVETGRRVHSEVVVSGL 166
Query: 183 RLDGFLCNALIDLYSK 230
D ++ NAL+ +YSK
Sbjct: 167 ESDIYVANALLAMYSK 182
>gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 65.9 bits (159), Expect = 5e-09
Identities = 32/82 (39%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTL------ANKDQWDEASLLGVLPACANLMALKQGREIHAH 164
++ + + ++P ++L LFS+ A ++ D S++ +LPACA+L AL Q +EIH++
Sbjct: 225 VAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSY 284
Query: 165 MLRSGLRLDGFLCNALIDLYSK 230
+R+G D F+CNALID Y+K
Sbjct: 285 AIRNGTFADAFVCNALIDTYAK 306
>ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Citrus sinensis]
Length = 872
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/76 (43%), Positives = 51/76 (67%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
I GY++N+ P +L LF L N + D ++ +LPACA+L AL++GREIH ++LR G+
Sbjct: 473 IGGYSKNSCPNEALDLFVAMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGI 531
Query: 183 RLDGFLCNALIDLYSK 230
D + NA++D+Y K
Sbjct: 532 SADRNVANAIVDMYVK 547
>ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/76 (46%), Positives = 48/76 (63%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
I GY+ +D L SL LFS+ + D S +GV+ ACANL ALKQG+E+H LR+ L
Sbjct: 386 IIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHL 445
Query: 183 RLDGFLCNALIDLYSK 230
F+ N+L+D Y+K
Sbjct: 446 YSHLFVSNSLLDFYTK 461
>ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/76 (46%), Positives = 48/76 (63%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
I GY+ +D L SL LFS+ + D S +GV+ ACANL ALKQG+E+H LR+ L
Sbjct: 535 IIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHL 594
Query: 183 RLDGFLCNALIDLYSK 230
F+ N+L+D Y+K
Sbjct: 595 YSHLFVSNSLLDFYTK 610
>tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/76 (44%), Positives = 50/76 (65%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
I GY+RNN P S LFSD L + + + ++ +LPA A++ +L++GREIHA+ LR G
Sbjct: 692 IGGYSRNNFPNESFSLFSDMLL-QFRPNAVTMTCILPAAASISSLERGREIHAYALRRGF 750
Query: 183 RLDGFLCNALIDLYSK 230
D + NAL+D+Y K
Sbjct: 751 LEDSYASNALVDMYVK 766
>ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, partial [Populus
trichocarpa] gi|550340410|gb|EEE86244.2| hypothetical
protein POPTR_0004s05810g, partial [Populus trichocarpa]
Length = 778
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/76 (42%), Positives = 49/76 (64%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
I GY++N+ P +L LF D + D +L +LPACA+L +L +G+E+H H+LR+G
Sbjct: 379 IGGYSKNSLPNEALSLFGDMVLEMKP-DGTTLACILPACASLASLDRGKEVHGHILRNGF 437
Query: 183 RLDGFLCNALIDLYSK 230
D + NAL+D+Y K
Sbjct: 438 FSDQQVANALVDMYVK 453
>ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Cucumis sativus]
Length = 1096
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/76 (40%), Positives = 48/76 (63%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
ISG+ +N SL LF K W+E + VL AC+NL +LK G+E+HA++L++ L
Sbjct: 652 ISGFVQNGYEEESLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRL 711
Query: 183 RLDGFLCNALIDLYSK 230
+ F+C+ L+D+Y K
Sbjct: 712 IANPFICSGLVDVYCK 727
>ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g18840-like [Cucumis
sativus]
Length = 1096
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/76 (40%), Positives = 48/76 (63%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
ISG+ +N SL LF K W+E + VL AC+NL +LK G+E+HA++L++ L
Sbjct: 652 ISGFVQNGYEEESLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRL 711
Query: 183 RLDGFLCNALIDLYSK 230
+ F+C+ L+D+Y K
Sbjct: 712 IANPFICSGLVDVYCK 727
>ref|XP_006340958.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Solanum tuberosum]
Length = 632
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/77 (42%), Positives = 47/77 (61%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
I+GY N D +L+LF + ++ SL+ ++PAC + LK G++IHA R GL
Sbjct: 310 INGYVLNGDFDEALLLFKAMQVEGVEPNKVSLISIIPACCSFDRLKGGKQIHAFSTRRGL 369
Query: 183 RLDGFLCNALIDLYSKS 233
+ LCNALID+YSKS
Sbjct: 370 NHEVSLCNALIDMYSKS 386
>ref|XP_004247938.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Solanum lycopersicum]
Length = 632
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/77 (42%), Positives = 47/77 (61%)
Frame = +3
Query: 3 ISGYARNNDPLSSLMLFSDTLANKDQWDEASLLGVLPACANLMALKQGREIHAHMLRSGL 182
I+GY N D +L+LF + ++ SL+ ++PAC + LK G++IHA R GL
Sbjct: 310 INGYVLNGDFDEALLLFKAMQVEGVEPNKVSLISIIPACCSFDRLKGGKQIHAFSTRRGL 369
Query: 183 RLDGFLCNALIDLYSKS 233
+ LCNALID+YSKS
Sbjct: 370 NHEVSLCNALIDMYSKS 386