BLASTX nr result

ID: Zingiber23_contig00051225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00051225
         (399 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273772.1| PREDICTED: mannan endo-1,4-beta-mannosidase ...    57   3e-06
emb|CBI21857.3| unnamed protein product [Vitis vinifera]               56   4e-06
ref|XP_002517909.1| hydrolase, hydrolyzing O-glycosyl compounds,...    55   1e-05
ref|XP_002330687.1| predicted protein [Populus trichocarpa] gi|5...    55   1e-05
gb|ABK95966.1| unknown [Populus trichocarpa]                           55   1e-05

>ref|XP_002273772.1| PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Vitis vinifera]
          Length = 437

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/63 (42%), Positives = 38/63 (60%)
 Frame = +2

Query: 209 KRLRPRIGLLRLAIGFALCILVTCLTVNALKLQPDQKSTQSFVVRNGVRFMVDGRVFYVN 388
           +R+    GL    IGFA       ++   LK+   +++  SFV RNG +FMVDG+VFY+N
Sbjct: 4   ERMMAGNGLFYPIIGFASVFAFIYMSFGDLKINLSEETKMSFVGRNGTQFMVDGKVFYIN 63

Query: 389 GWN 397
           GWN
Sbjct: 64  GWN 66


>emb|CBI21857.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/56 (46%), Positives = 35/56 (62%)
 Frame = +2

Query: 230 GLLRLAIGFALCILVTCLTVNALKLQPDQKSTQSFVVRNGVRFMVDGRVFYVNGWN 397
           GL    IGFA       ++   LK+   +++  SFV RNG +FMVDG+VFY+NGWN
Sbjct: 6   GLFYPIIGFASVFAFIYMSFGDLKINLSEETKMSFVGRNGTQFMVDGKVFYINGWN 61


>ref|XP_002517909.1| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus
           communis] gi|223542891|gb|EEF44427.1| hydrolase,
           hydrolyzing O-glycosyl compounds, putative [Ricinus
           communis]
          Length = 431

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/56 (44%), Positives = 33/56 (58%)
 Frame = +2

Query: 230 GLLRLAIGFALCILVTCLTVNALKLQPDQKSTQSFVVRNGVRFMVDGRVFYVNGWN 397
           GL    +GFA C+    ++    KL   Q    +FV RNG +FMV+GR FY+NGWN
Sbjct: 6   GLFYPILGFASCVAFLYMSFGDFKLSYHQGPELAFVTRNGTQFMVEGRPFYINGWN 61


>ref|XP_002330687.1| predicted protein [Populus trichocarpa]
           gi|566201133|ref|XP_006376482.1| glycosyl hydrolase
           family 5 family protein [Populus trichocarpa]
           gi|550325758|gb|ERP54279.1| glycosyl hydrolase family 5
           family protein [Populus trichocarpa]
          Length = 435

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +2

Query: 230 GLLRLAIGFALCILVTCLTVNALKLQPDQKSTQ-SFVVRNGVRFMVDGRVFYVNGWN 397
           GLL   +GFA C+    ++     L   Q+  + SFV RNG +FMVDGR FY+NGWN
Sbjct: 9   GLLYPILGFASCVAFIYMSFGGFILTNHQEHRELSFVERNGTQFMVDGRAFYINGWN 65


>gb|ABK95966.1| unknown [Populus trichocarpa]
          Length = 435

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +2

Query: 230 GLLRLAIGFALCILVTCLTVNALKLQPDQKSTQ-SFVVRNGVRFMVDGRVFYVNGWN 397
           GLL   +GFA C+    ++     L   Q+  + SFV RNG +FMVDGR FY+NGWN
Sbjct: 9   GLLYPILGFASCVAFIYMSFGGFILTNHQEHRELSFVERNGTQFMVDGRAFYINGWN 65


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