BLASTX nr result
ID: Zingiber23_contig00051183
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00051183
(319 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002441232.1| hypothetical protein SORBIDRAFT_09g022820 [S... 72 1e-10
gb|EMT02198.1| E3 ubiquitin-protein ligase UPL4 [Aegilops tauschii] 70 4e-10
gb|EMS49276.1| E3 ubiquitin-protein ligase UPL4 [Triticum urartu] 70 4e-10
ref|XP_006655387.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 69 6e-10
gb|AFW82268.1| hypothetical protein ZEAMMB73_111992 [Zea mays] 69 8e-10
gb|AFW82267.1| hypothetical protein ZEAMMB73_111992 [Zea mays] 69 8e-10
gb|EEC79365.1| hypothetical protein OsI_20254 [Oryza sativa Indi... 68 1e-09
gb|EOY07746.1| Ubiquitin protein ligase E3a, putative isoform 4,... 64 2e-08
gb|EOY07744.1| Ubiquitin protein ligase E3a, putative isoform 2 ... 64 2e-08
gb|EOY07743.1| Ubiquitin protein ligase E3a, putative isoform 1 ... 64 2e-08
ref|XP_003566174.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 60 3e-07
ref|XP_004170016.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin... 59 7e-07
ref|XP_004137960.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin... 59 7e-07
ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 59 9e-07
emb|CBI32615.3| unnamed protein product [Vitis vinifera] 59 9e-07
ref|XP_002322854.2| hypothetical protein POPTR_0016s08640g [Popu... 58 1e-06
ref|XP_004306227.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 56 6e-06
>ref|XP_002441232.1| hypothetical protein SORBIDRAFT_09g022820 [Sorghum bicolor]
gi|241946517|gb|EES19662.1| hypothetical protein
SORBIDRAFT_09g022820 [Sorghum bicolor]
Length = 1514
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Frame = +1
Query: 13 CMCFAFTPSSVPSSQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQHLRTL 192
C C+AF +++ +TC++GKD++ R +K +Y+ +S+M ++ LQ L+T
Sbjct: 549 CFCYAFDARRSEAAEKRTCRIGKDSLFTFARHVKTTYFT-KDVVSSEMGLTEILQKLKTC 607
Query: 193 CRVLDDSMDTHSDDVGNLHE-VKFSTQILDEVMRELSQGESLS 318
C VL+++ D SD NLH+ ++ + IL+EVM EL GE+++
Sbjct: 608 CAVLNETTDKSSDQC-NLHQSEEYLSTILNEVMMELHGGETMT 649
>gb|EMT02198.1| E3 ubiquitin-protein ligase UPL4 [Aegilops tauschii]
Length = 1402
Score = 69.7 bits (169), Expect = 4e-10
Identities = 37/102 (36%), Positives = 58/102 (56%)
Frame = +1
Query: 13 CMCFAFTPSSVPSSQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQHLRTL 192
C C+AF S++ + C++G+ + N R +K +Y+ A NS+M ++ LQ L+T
Sbjct: 387 CFCYAFDSRQSESAETRACRIGQGNLFNFARHVKTTYFTAE-AVNSEMGLTEILQKLKTC 445
Query: 193 CRVLDDSMDTHSDDVGNLHEVKFSTQILDEVMRELSQGESLS 318
C VL+DS D + +E ST IL EVM EL GE+++
Sbjct: 446 CAVLNDSADKSLNQDSLQNEEHLST-ILSEVMMELHGGETMT 486
>gb|EMS49276.1| E3 ubiquitin-protein ligase UPL4 [Triticum urartu]
Length = 1323
Score = 69.7 bits (169), Expect = 4e-10
Identities = 37/102 (36%), Positives = 58/102 (56%)
Frame = +1
Query: 13 CMCFAFTPSSVPSSQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQHLRTL 192
C C+AF S++ + C++G+ + N R +K +Y+ A NS+M ++ LQ L+T
Sbjct: 387 CFCYAFDSRQSESAETRACRIGQGNLFNFARHVKTTYFTAE-AVNSEMGLTEILQKLKTC 445
Query: 193 CRVLDDSMDTHSDDVGNLHEVKFSTQILDEVMRELSQGESLS 318
C VL+DS D + +E ST IL EVM EL GE+++
Sbjct: 446 CAVLNDSADKSFNQDSLQNEEHLST-ILSEVMMELHGGETMT 486
>ref|XP_006655387.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Oryza
brachyantha]
Length = 1541
Score = 68.9 bits (167), Expect = 6e-10
Identities = 38/102 (37%), Positives = 57/102 (55%)
Frame = +1
Query: 13 CMCFAFTPSSVPSSQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQHLRTL 192
C C+AF +++ + C +GK + R +K SY+ A NS+M ++ LQ L+T
Sbjct: 586 CFCYAFDYPRSDAAETRICMIGKGNLFTFARHVKTSYFTAE-AVNSEMGLTEILQKLKTC 644
Query: 193 CRVLDDSMDTHSDDVGNLHEVKFSTQILDEVMRELSQGESLS 318
C VL+DS D S + NL + T IL EVM EL GE+++
Sbjct: 645 CAVLNDSAD-KSLNQDNLQNEEHLTNILSEVMMELHGGETMT 685
>gb|AFW82268.1| hypothetical protein ZEAMMB73_111992 [Zea mays]
Length = 1042
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/102 (32%), Positives = 60/102 (58%)
Frame = +1
Query: 13 CMCFAFTPSSVPSSQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQHLRTL 192
C C+AF +++ +TC++GKD++ R +K +Y+ +S+M ++ LQ L+
Sbjct: 247 CFCYAFDACRSEAAEKRTCRIGKDSLFTFARHVKTTYFT-KDVVSSEMGLTEILQKLKNC 305
Query: 193 CRVLDDSMDTHSDDVGNLHEVKFSTQILDEVMRELSQGESLS 318
C VL+++ D S+ NL ++ + IL EVM EL GE+++
Sbjct: 306 CAVLNETTDKSSEQC-NLQNEEYLSTILSEVMMELHGGETMT 346
>gb|AFW82267.1| hypothetical protein ZEAMMB73_111992 [Zea mays]
Length = 1210
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/102 (32%), Positives = 60/102 (58%)
Frame = +1
Query: 13 CMCFAFTPSSVPSSQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQHLRTL 192
C C+AF +++ +TC++GKD++ R +K +Y+ +S+M ++ LQ L+
Sbjct: 247 CFCYAFDACRSEAAEKRTCRIGKDSLFTFARHVKTTYFT-KDVVSSEMGLTEILQKLKNC 305
Query: 193 CRVLDDSMDTHSDDVGNLHEVKFSTQILDEVMRELSQGESLS 318
C VL+++ D S+ NL ++ + IL EVM EL GE+++
Sbjct: 306 CAVLNETTDKSSEQC-NLQNEEYLSTILSEVMMELHGGETMT 346
>gb|EEC79365.1| hypothetical protein OsI_20254 [Oryza sativa Indica Group]
Length = 1351
Score = 68.2 bits (165), Expect = 1e-09
Identities = 37/102 (36%), Positives = 58/102 (56%)
Frame = +1
Query: 13 CMCFAFTPSSVPSSQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQHLRTL 192
C C+AF +++ +TC +GK + R +K +Y+ A NS+M ++ LQ L+T
Sbjct: 415 CFCYAFDYPRSDAAETRTCMIGKGNLFTFARHVKTTYFTTE-AVNSEMGLTEILQKLKTC 473
Query: 193 CRVLDDSMDTHSDDVGNLHEVKFSTQILDEVMRELSQGESLS 318
C VL+DS D S + N+ + T IL EVM EL GE+++
Sbjct: 474 CAVLNDSTD-KSLNRDNIQNEEHLTNILSEVMMELHGGETMT 514
>gb|EOY07746.1| Ubiquitin protein ligase E3a, putative isoform 4, partial
[Theobroma cacao]
Length = 1083
Score = 64.3 bits (155), Expect = 2e-08
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +1
Query: 4 VSRCMCFAFTPSSVPSSQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQHL 183
+ RC+C+AF +VPSS CKL KD++ NL + IK SY+ ++S+ + LQ+L
Sbjct: 93 IRRCLCYAF--DTVPSSSAPPCKLDKDSVCNLAKHIKTSYFAPE-LSDSEKGMTDILQNL 149
Query: 184 RTLCRVLDDSMDTH-SDDVGNLHEVKFSTQILDEVMRELSQGESLS 318
RT L D ++ DD HE KF + IL ++M +L+ E +S
Sbjct: 150 RTFSAALSDLINMPVDDDTPAQHEEKFHS-ILHQIMLKLNGRERVS 194
>gb|EOY07744.1| Ubiquitin protein ligase E3a, putative isoform 2 [Theobroma cacao]
Length = 1536
Score = 64.3 bits (155), Expect = 2e-08
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +1
Query: 4 VSRCMCFAFTPSSVPSSQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQHL 183
+ RC+C+AF +VPSS CKL KD++ NL + IK SY+ ++S+ + LQ+L
Sbjct: 569 IRRCLCYAF--DTVPSSSAPPCKLDKDSVCNLAKHIKTSYFAPE-LSDSEKGMTDILQNL 625
Query: 184 RTLCRVLDDSMDTH-SDDVGNLHEVKFSTQILDEVMRELSQGESLS 318
RT L D ++ DD HE KF + IL ++M +L+ E +S
Sbjct: 626 RTFSAALSDLINMPVDDDTPAQHEEKFHS-ILHQIMLKLNGRERVS 670
>gb|EOY07743.1| Ubiquitin protein ligase E3a, putative isoform 1 [Theobroma cacao]
gi|508715848|gb|EOY07745.1| Ubiquitin protein ligase
E3a, putative isoform 1 [Theobroma cacao]
Length = 1571
Score = 64.3 bits (155), Expect = 2e-08
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +1
Query: 4 VSRCMCFAFTPSSVPSSQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQHL 183
+ RC+C+AF +VPSS CKL KD++ NL + IK SY+ ++S+ + LQ+L
Sbjct: 569 IRRCLCYAF--DTVPSSSAPPCKLDKDSVCNLAKHIKTSYFAPE-LSDSEKGMTDILQNL 625
Query: 184 RTLCRVLDDSMDTH-SDDVGNLHEVKFSTQILDEVMRELSQGESLS 318
RT L D ++ DD HE KF + IL ++M +L+ E +S
Sbjct: 626 RTFSAALSDLINMPVDDDTPAQHEEKFHS-ILHQIMLKLNGRERVS 670
>ref|XP_003566174.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Brachypodium
distachyon]
Length = 1478
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/90 (36%), Positives = 54/90 (60%)
Frame = +1
Query: 49 SSQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQHLRTLCRVLDDSMDTHS 228
S++ +TC++G+ + N R +K +Y+ A +S+M ++ LQ L+T C VL+DS D
Sbjct: 545 SAETRTCRIGQGNLFNFARHVKTTYFTAE-AVSSEMGLTEILQKLKTCCAVLNDSADKSL 603
Query: 229 DDVGNLHEVKFSTQILDEVMRELSQGESLS 318
+ G +E S IL EVM EL GE+++
Sbjct: 604 NKDGLRNEEHLSN-ILSEVMMELHGGETMT 632
>ref|XP_004170016.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
UPL4-like, partial [Cucumis sativus]
Length = 1456
Score = 58.9 bits (141), Expect = 7e-07
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Frame = +1
Query: 10 RCMCFAFTPSSVPS-SQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQHLR 186
RC+C+AF+ S PS S+ +CKL KD++++L I+ S Y ++D + LQ+LR
Sbjct: 566 RCLCYAFSSSCFPSVSETGSCKLDKDSVYSLANHIR-SIYFAEDLCDTDEGVTDILQNLR 624
Query: 187 TLCRVLDDSM------DTHSDDVGNLHEVKFSTQILDEVMRELSQGESLS 318
T LDD + DT + D L+ +L E+M +L GE +S
Sbjct: 625 TFSGALDDLLNLSLIKDTPAQDEEKLY------ALLAEIMSKLKCGEPIS 668
>ref|XP_004137960.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
UPL4-like [Cucumis sativus]
Length = 1508
Score = 58.9 bits (141), Expect = 7e-07
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Frame = +1
Query: 10 RCMCFAFTPSSVPS-SQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQHLR 186
RC+C+AF+ S PS S+ +CKL KD++++L I+ S Y ++D + LQ+LR
Sbjct: 568 RCLCYAFSSSCFPSVSETGSCKLDKDSVYSLANHIR-SIYFAEDLCDTDEGVTDILQNLR 626
Query: 187 TLCRVLDDSM------DTHSDDVGNLHEVKFSTQILDEVMRELSQGESLS 318
T LDD + DT + D L+ +L E+M +L GE +S
Sbjct: 627 TFSGALDDLLNLSLIKDTPAQDEEKLY------ALLAEIMSKLKCGEPIS 670
>ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Vitis vinifera]
Length = 1575
Score = 58.5 bits (140), Expect = 9e-07
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Frame = +1
Query: 4 VSRCMCFAFTPSSVPS-SQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQH 180
V RC+C+AF S S+++ CKL KD++HNL + I+ YL NS+ + LQ
Sbjct: 578 VFRCLCYAFDNDQFSSASEMENCKLEKDSVHNLAKHIRTK-YLTTELLNSEKGLTDILQK 636
Query: 181 LRTLCRVLDDSMD-THSDDVGNLHEVKFSTQILDEVMRELSQGESLS 318
LRT L D +D + DD HE K+ +L +++ L+ E +S
Sbjct: 637 LRTFSAALTDLVDMSLHDDTSAQHEEKYYC-MLHQIITILNGKEPIS 682
>emb|CBI32615.3| unnamed protein product [Vitis vinifera]
Length = 1487
Score = 58.5 bits (140), Expect = 9e-07
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Frame = +1
Query: 4 VSRCMCFAFTPSSVPS-SQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQH 180
V RC+C+AF S S+++ CKL KD++HNL + I+ YL NS+ + LQ
Sbjct: 578 VFRCLCYAFDNDQFSSASEMENCKLEKDSVHNLAKHIRTK-YLTTELLNSEKGLTDILQK 636
Query: 181 LRTLCRVLDDSMD-THSDDVGNLHEVKFSTQILDEVMRELSQGESLS 318
LRT L D +D + DD HE K+ +L +++ L+ E +S
Sbjct: 637 LRTFSAALTDLVDMSLHDDTSAQHEEKYYC-MLHQIITILNGKEPIS 682
>ref|XP_002322854.2| hypothetical protein POPTR_0016s08640g [Populus trichocarpa]
gi|550321128|gb|EEF04615.2| hypothetical protein
POPTR_0016s08640g [Populus trichocarpa]
Length = 1545
Score = 58.2 bits (139), Expect = 1e-06
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 VVSRCMCFAF-TPSSVPSSQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQ 177
VV RC+C+AF T S+ +S+ TCKL KD + NLG+ I+ SY+ + +S+ + LQ
Sbjct: 565 VVMRCLCYAFDTGQSLSASETGTCKLEKDTVENLGKHIRISYF-ALESCDSEKGLTDILQ 623
Query: 178 HLRTLCRVLDDSMDTHSDDVGNLHEVKFSTQILDEVMRELSQGESLS 318
LR L L D M+ + + IL ++M +L E +S
Sbjct: 624 KLRALSAELSDLMNMSVKIGSCTQDEEKCYSILCQIMEKLDGREPVS 670
>ref|XP_004306227.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Fragaria vesca
subsp. vesca]
Length = 1567
Score = 55.8 bits (133), Expect = 6e-06
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Frame = +1
Query: 4 VSRCMCFAFTPSSVPSSQLKTCKLGKDAIHNLGRKIKASYYLGHGAANSDMSCSKTLQHL 183
V RC+C+AF PSS P S +C L KD++++L + ++ Y+ + + S + LQ L
Sbjct: 573 VLRCLCYAF-PSSSPGSDNGSCMLEKDSVYSLAKHVRYKYFAPE-LCDPEKSLTDVLQKL 630
Query: 184 RTLCRVLDDSMDTHSDDVG-NLHEVKFSTQILDEVMRELSQGESLS 318
RT L D M+ D + HE F ++++VM +LS E +S
Sbjct: 631 RTFSASLSDLMNMSLDACAPDQHEESF-YGVMNQVMEKLSGTEPIS 675