BLASTX nr result

ID: Zingiber23_contig00051110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00051110
         (277 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347705.1| PREDICTED: suppressor protein SRP40-like [So...    57   2e-06
ref|XP_002316460.2| hypothetical protein POPTR_0010s25330g [Popu...    55   7e-06

>ref|XP_006347705.1| PREDICTED: suppressor protein SRP40-like [Solanum tuberosum]
          Length = 549

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
 Frame = +3

Query: 12  HWEERNSRDYFSETESS-------MRNYYQIEHFPPDLESGGLYEMVRSEVHSAVSEITT 170
           +WE+  S    SE E              Q + +  D  + G+YE VRSEV  A+S+I +
Sbjct: 194 NWEDGVSTCSLSEAEEKTIRAVCEQMKSVQSDQWGADTATSGIYETVRSEVRRAISDIQS 253

Query: 171 NLENVIKRK----VPVDSIGNVPPELVNQDEIELVPDIQ 275
           +LE+ I+R     +   ++ ++PP LVN + +ELV D++
Sbjct: 254 DLEDAIRRNNVNAITTANVADIPPNLVNPEAVELVSDVR 292


>ref|XP_002316460.2| hypothetical protein POPTR_0010s25330g [Populus trichocarpa]
           gi|550330578|gb|EEF02631.2| hypothetical protein
           POPTR_0010s25330g [Populus trichocarpa]
          Length = 593

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
 Frame = +3

Query: 9   RHWEERNSRDYFSETESSMRNYY--QIEHFPPDLESGG----LYEMVRSEVHSAVSEITT 170
           R WE+   R  FSE E         Q++ F  D    G    +YE VRSEV  A+++I  
Sbjct: 230 RSWEDGGLRSSFSEAEERTIKAVCEQMQSFQGDNLGDGTSSRIYETVRSEVRRAIADIQN 289

Query: 171 NLENVIKRK----VPVDSIGNVPPELVNQDEIELVPDIQ 275
           +LE+ I+R     + + ++ ++PP+LVN   +ELV DI+
Sbjct: 290 DLESTIQRSNTTAIAMANVTDIPPDLVNPSAVELVLDIR 328


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