BLASTX nr result
ID: Zingiber23_contig00051106
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00051106
(273 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320963.2| hypothetical protein POPTR_0014s11320g [Popu... 72 8e-11
ref|XP_004080617.1| PREDICTED: putative pre-mRNA-splicing factor... 72 8e-11
ref|XP_005278486.1| PREDICTED: ATP-dependent RNA helicase DQX1 [... 70 3e-10
ref|XP_005139720.1| PREDICTED: putative pre-mRNA-splicing factor... 70 3e-10
ref|XP_005045722.1| PREDICTED: ATP-dependent RNA helicase DQX1 i... 70 3e-10
ref|XP_005045721.1| PREDICTED: ATP-dependent RNA helicase DQX1 i... 70 3e-10
ref|XP_004612057.1| PREDICTED: ATP-dependent RNA helicase DQX1 [... 70 3e-10
ref|XP_001755545.1| predicted protein [Physcomitrella patens] gi... 70 3e-10
ref|XP_005435459.1| PREDICTED: ATP-dependent RNA helicase DQX1 [... 70 4e-10
ref|XP_005239558.1| PREDICTED: ATP-dependent RNA helicase DQX1 [... 70 4e-10
ref|NP_001088262.1| putative pre-mRNA-splicing factor ATP-depend... 70 4e-10
ref|XP_003922626.1| PREDICTED: ATP-dependent RNA helicase DQX1 [... 70 4e-10
ref|XP_003793413.1| PREDICTED: ATP-dependent RNA helicase DQX1 [... 70 4e-10
ref|XP_003268757.1| PREDICTED: ATP-dependent RNA helicase DQX1 [... 70 4e-10
ref|XP_001784863.1| predicted protein [Physcomitrella patens] gi... 70 4e-10
gb|EMJ20628.1| hypothetical protein PRUPE_ppa020570mg, partial [... 69 5e-10
ref|XP_003908895.1| PREDICTED: ATP-dependent RNA helicase DQX1 [... 69 5e-10
ref|XP_002807572.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen... 69 5e-10
ref|XP_004029524.1| PREDICTED: ATP-dependent RNA helicase DQX1 [... 69 6e-10
ref|XP_002811921.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen... 69 6e-10
>ref|XP_002320963.2| hypothetical protein POPTR_0014s11320g [Populus trichocarpa]
gi|550323982|gb|EEE99278.2| hypothetical protein
POPTR_0014s11320g [Populus trichocarpa]
Length = 729
Score = 72.0 bits (175), Expect = 8e-11
Identities = 30/63 (47%), Positives = 46/63 (73%)
Frame = -3
Query: 190 DEEATEVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQVVIVAAPPGSGKST 11
+E ++ +N G P+S+RY+++L++RKNLPVW + FL L KNQV+++ GSGK+T
Sbjct: 37 NEGSSSINRWNGKPYSQRYYEILEKRKNLPVWHQKEDFLQVLKKNQVLVLVGETGSGKTT 96
Query: 10 QIP 2
QIP
Sbjct: 97 QIP 99
>ref|XP_004080617.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX32-like [Oryzias latipes]
Length = 760
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = -3
Query: 175 EVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQVVIVAAPPGSGKSTQIP 2
E+NP G PFS RY+KLL++RK LPVW R++F ++L NQ+V+V+A SG+STQ+P
Sbjct: 59 ELNPFDGLPFSSRYYKLLKKRKTLPVWKVRSQFEESLVNNQLVVVSATAKSGRSTQVP 116
>ref|XP_005278486.1| PREDICTED: ATP-dependent RNA helicase DQX1 [Chrysemys picta bellii]
Length = 752
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/59 (54%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = -3
Query: 175 EVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDAL-AKNQVVIVAAPPGSGKSTQIP 2
EVNP G PFS RY++LLQRR++LP+WA + F++ L + + +V+V+ PG+GKSTQIP
Sbjct: 42 EVNPYDGLPFSSRYYELLQRRRDLPIWATKYSFMEHLESSSGIVLVSGGPGTGKSTQIP 100
>ref|XP_005139720.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX32-like, partial [Melopsittacus undulatus]
Length = 258
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/59 (54%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = -3
Query: 175 EVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQ-VVIVAAPPGSGKSTQIP 2
EVNP G PFS RY++LL++R+ LPVW + F++ L N +V+V+ PPG+GKSTQIP
Sbjct: 13 EVNPYDGLPFSSRYYELLRQRRELPVWTTKYSFMEHLEGNSGIVLVSGPPGTGKSTQIP 71
>ref|XP_005045722.1| PREDICTED: ATP-dependent RNA helicase DQX1 isoform X2 [Ficedula
albicollis]
Length = 741
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/59 (54%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = -3
Query: 175 EVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQ-VVIVAAPPGSGKSTQIP 2
EVNP G PFS RY++LL++R+ LPVW + F++ L N +V+V+ PPG+GKSTQIP
Sbjct: 38 EVNPYDGLPFSSRYYELLRQRRELPVWTTKYSFMEHLEGNSGIVLVSGPPGTGKSTQIP 96
>ref|XP_005045721.1| PREDICTED: ATP-dependent RNA helicase DQX1 isoform X1 [Ficedula
albicollis]
Length = 768
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/59 (54%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = -3
Query: 175 EVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQ-VVIVAAPPGSGKSTQIP 2
EVNP G PFS RY++LL++R+ LPVW + F++ L N +V+V+ PPG+GKSTQIP
Sbjct: 38 EVNPYDGLPFSSRYYELLRQRRELPVWTTKYSFMEHLEGNSGIVLVSGPPGTGKSTQIP 96
>ref|XP_004612057.1| PREDICTED: ATP-dependent RNA helicase DQX1 [Sorex araneus]
Length = 723
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Frame = -3
Query: 190 DEEATEVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQ--VVIVAAPPGSGK 17
+E VNP G PFS RY++LL+RR+ LP+WA R FL+ L + VV+V+ PGSGK
Sbjct: 17 EESELAVNPFDGLPFSSRYYELLERRRALPIWAARFVFLEQLERGPGGVVLVSGEPGSGK 76
Query: 16 STQIP 2
STQIP
Sbjct: 77 STQIP 81
>ref|XP_001755545.1| predicted protein [Physcomitrella patens]
gi|168005698|ref|XP_001755547.1| predicted protein
[Physcomitrella patens] gi|162693252|gb|EDQ79605.1|
predicted protein [Physcomitrella patens]
gi|162693254|gb|EDQ79607.1| predicted protein
[Physcomitrella patens]
Length = 715
Score = 70.1 bits (170), Expect = 3e-10
Identities = 29/57 (50%), Positives = 43/57 (75%)
Frame = -3
Query: 172 VNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQVVIVAAPPGSGKSTQIP 2
+NP TG P+S +Y ++L++R+ LPVW + +FL+ LAKNQ +I+ GSGK+TQIP
Sbjct: 33 LNPHTGRPYSAKYFEILEKRRTLPVWQQKAEFLNILAKNQTMILVGETGSGKTTQIP 89
>ref|XP_005435459.1| PREDICTED: ATP-dependent RNA helicase DQX1 [Falco cherrug]
Length = 1007
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/59 (52%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = -3
Query: 175 EVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQ-VVIVAAPPGSGKSTQIP 2
EVNP G PFS RY++LL++R+ LPVW + F++ L N +++V+ PPG+GKSTQIP
Sbjct: 39 EVNPYDGLPFSSRYYELLRQRRELPVWTTKYSFMEHLEGNSGIILVSGPPGTGKSTQIP 97
>ref|XP_005239558.1| PREDICTED: ATP-dependent RNA helicase DQX1 [Falco peregrinus]
Length = 744
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/59 (52%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = -3
Query: 175 EVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQ-VVIVAAPPGSGKSTQIP 2
EVNP G PFS RY++LL++R+ LPVW + F++ L N +++V+ PPG+GKSTQIP
Sbjct: 39 EVNPYDGLPFSSRYYELLRQRRELPVWTTKYSFMEHLEGNSGIILVSGPPGTGKSTQIP 97
>ref|NP_001088262.1| putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
[Xenopus laevis] gi|82233454|sp|Q5XH12.1|DHX32_XENLA
RecName: Full=Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32
gi|54038016|gb|AAH84264.1| LOC495093 protein [Xenopus
laevis]
Length = 748
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/58 (53%), Positives = 44/58 (75%)
Frame = -3
Query: 175 EVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQVVIVAAPPGSGKSTQIP 2
E+NP G P+S R++KLL+ R+ LP+W + FL+ LA NQ+V+V+A P SGKS+QIP
Sbjct: 41 ELNPFDGLPYSSRFYKLLKERETLPIWKIKYDFLEHLAHNQIVVVSAGPKSGKSSQIP 98
>ref|XP_003922626.1| PREDICTED: ATP-dependent RNA helicase DQX1 [Saimiri boliviensis
boliviensis]
Length = 719
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = -3
Query: 187 EEATEVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQ--VVIVAAPPGSGKS 14
E VNP G PFS RY++LL++R+ LP+WA R FL+ L N VV+V+ PGSGKS
Sbjct: 18 ESEVAVNPFDGLPFSSRYYELLEQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKS 77
Query: 13 TQIP 2
TQIP
Sbjct: 78 TQIP 81
>ref|XP_003793413.1| PREDICTED: ATP-dependent RNA helicase DQX1 [Otolemur garnettii]
Length = 719
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Frame = -3
Query: 190 DEEATEVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQ--VVIVAAPPGSGK 17
+E VNP G PFS RY++LL++R+ LP+WA R FL+ L N VV+V+ PGSGK
Sbjct: 17 EESELAVNPFDGLPFSSRYYELLEQRRALPIWAARFIFLEQLESNPTGVVLVSGEPGSGK 76
Query: 16 STQIP 2
STQIP
Sbjct: 77 STQIP 81
>ref|XP_003268757.1| PREDICTED: ATP-dependent RNA helicase DQX1 [Nomascus leucogenys]
Length = 717
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = -3
Query: 187 EEATEVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQ--VVIVAAPPGSGKS 14
E VNP G PFS RY++LL++R+ LP+WA R FL+ L N VV+V+ PGSGKS
Sbjct: 18 ESELAVNPFDGLPFSSRYYELLKQRQGLPIWAARFTFLEQLESNPTGVVLVSGEPGSGKS 77
Query: 13 TQIP 2
TQIP
Sbjct: 78 TQIP 81
>ref|XP_001784863.1| predicted protein [Physcomitrella patens]
gi|162663569|gb|EDQ50326.1| predicted protein
[Physcomitrella patens]
Length = 717
Score = 69.7 bits (169), Expect = 4e-10
Identities = 29/57 (50%), Positives = 42/57 (73%)
Frame = -3
Query: 172 VNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQVVIVAAPPGSGKSTQIP 2
+NP TG P+S +Y ++L++R+ LPVW + +FL LAKNQ +I+ GSGK+TQIP
Sbjct: 35 LNPHTGRPYSAKYFEILEKRRTLPVWQQKAEFLSILAKNQTMILVGETGSGKTTQIP 91
>gb|EMJ20628.1| hypothetical protein PRUPE_ppa020570mg, partial [Prunus persica]
Length = 695
Score = 69.3 bits (168), Expect = 5e-10
Identities = 29/57 (50%), Positives = 42/57 (73%)
Frame = -3
Query: 172 VNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQVVIVAAPPGSGKSTQIP 2
+NP TG P+S+ Y+++L++RK LPVW + +FL AL NQ +I+ GSGK+TQIP
Sbjct: 43 INPWTGMPYSQSYYEILEKRKTLPVWQQKDEFLKALKANQCIILVGETGSGKTTQIP 99
>ref|XP_003908895.1| PREDICTED: ATP-dependent RNA helicase DQX1 [Papio anubis]
Length = 717
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = -3
Query: 187 EEATEVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQ--VVIVAAPPGSGKS 14
E VNP G PFS RY++LL++R LP+WA R FL+ L N VV+V+ PGSGKS
Sbjct: 18 ESELAVNPFDGLPFSSRYYELLEQRHTLPIWAARFTFLEQLESNPTGVVLVSGEPGSGKS 77
Query: 13 TQIP 2
TQIP
Sbjct: 78 TQIP 81
>ref|XP_002807572.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DQX1
[Callithrix jacchus]
Length = 591
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = -3
Query: 187 EEATEVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQ--VVIVAAPPGSGKS 14
E VNP G PFS RY++LL++R+ LP+WA R FL+ L N VV+V+ PGSGKS
Sbjct: 18 ESELAVNPFDGLPFSSRYYELLEQRQALPIWAARFTFLEQLENNPTGVVLVSGEPGSGKS 77
Query: 13 TQIP 2
TQIP
Sbjct: 78 TQIP 81
>ref|XP_004029524.1| PREDICTED: ATP-dependent RNA helicase DQX1 [Gorilla gorilla
gorilla]
Length = 717
Score = 68.9 bits (167), Expect = 6e-10
Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = -3
Query: 187 EEATEVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQ--VVIVAAPPGSGKS 14
E VNP G PFS RY++LL++R+ LP+WA R FL+ L N VV+V+ PGSGKS
Sbjct: 18 ESELAVNPFDGLPFSSRYYELLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKS 77
Query: 13 TQIP 2
TQIP
Sbjct: 78 TQIP 81
>ref|XP_002811921.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DQX1
[Pongo abelii]
Length = 717
Score = 68.9 bits (167), Expect = 6e-10
Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = -3
Query: 187 EEATEVNPATGSPFSRRYHKLLQRRKNLPVWADRTKFLDALAKNQ--VVIVAAPPGSGKS 14
E VNP G PFS RY++LL++R+ LP+WA R FL+ L N VV+V+ PGSGKS
Sbjct: 18 ESELAVNPFDGLPFSSRYYELLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKS 77
Query: 13 TQIP 2
TQIP
Sbjct: 78 TQIP 81