BLASTX nr result

ID: Zingiber23_contig00049966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00049966
         (427 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892809.1| hypothetical protein ARALYDRAFT_888824 [Arab...    57   3e-06
ref|NP_172898.2| AAA-type ATPase family protein [Arabidopsis tha...    55   1e-05

>ref|XP_002892809.1| hypothetical protein ARALYDRAFT_888824 [Arabidopsis lyrata subsp.
            lyrata] gi|297338651|gb|EFH69068.1| hypothetical protein
            ARALYDRAFT_888824 [Arabidopsis lyrata subsp. lyrata]
          Length = 1130

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
 Frame = +3

Query: 3    INCLKVCDVGSSHKEQTGAT-NRCAFSPSVLHREN---------QDRESGPG-CNRLLCW 149
            +  LK+C++G   + QTG     C  SPS+LH  N          + ESG G C+ L CW
Sbjct: 1034 VKVLKICEMGEFKENQTGKRMEHCPVSPSLLHNSNFTNNKDNLGYESESGRGVCSLLFCW 1093

Query: 150  RTQKSNRQKSKQGVQVRLKKA--GHLSLLGQCAK 245
             TQKS R+   +G  VR +++     SL   CA+
Sbjct: 1094 NTQKSPRRTKIKGTSVRSRRSRERRFSLFSGCAR 1127


>ref|NP_172898.2| AAA-type ATPase family protein [Arabidopsis thaliana]
            gi|528050033|sp|F4HW65.1|STIL1_ARATH RecName:
            Full=Protein STICHEL-like 1 gi|332191046|gb|AEE29167.1|
            AAA-type ATPase family protein [Arabidopsis thaliana]
          Length = 1116

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
 Frame = +3

Query: 3    INCLKVCDVGSSHKEQTGAT-NRCAFSPSVLHREN---------QDRESGPG-CNRLLCW 149
            +  LK+C++G   + Q+G     C  SPS+LH  N          + ESG G C+ L CW
Sbjct: 1020 VKVLKICEMGEFQENQSGKRMEHCPVSPSLLHNSNFTNNKDNLGYESESGRGVCSLLFCW 1079

Query: 150  RTQKSNRQKSKQGVQVRLKKA--GHLSLLGQCAK 245
             TQKS R+   +G  +R +++     SL   CA+
Sbjct: 1080 NTQKSPRRTKIKGTSMRSRRSRERRFSLFSACAR 1113


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